BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780776|ref|YP_003065189.1| ribosome recycling factor
[Candidatus Liberibacter asiaticus str. psy62]
         (186 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780776|ref|YP_003065189.1| ribosome recycling factor [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|170785427|gb|ACB37708.1| ribosome recycling factor [Candidatus Liberibacter asiaticus]
 gi|254040453|gb|ACT57249.1| ribosome recycling factor [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 186

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 186/186 (100%), Positives = 186/186 (100%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV
Sbjct: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA
Sbjct: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK
Sbjct: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180

Query: 181 KEIMHF 186
           KEIMHF
Sbjct: 181 KEIMHF 186


>gi|315121993|ref|YP_004062482.1| ribosome recycling factor [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495395|gb|ADR51994.1| ribosome recycling factor [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 186

 Score =  307 bits (786), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 157/186 (84%), Positives = 171/186 (91%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MNQ IDL++IKDRM D ISFLKKDMMTLRTGRVS SMLDLVKV++YGS VPLNQVANVTV
Sbjct: 1   MNQAIDLKSIKDRMNDAISFLKKDMMTLRTGRVSTSMLDLVKVDSYGSRVPLNQVANVTV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+PR L VSVWD  MV+SVERGIH+SNLG NPIVEGQVLRIPVPETTEERRLALVKVAH 
Sbjct: 61  LDPRTLAVSVWDSSMVSSVERGIHDSNLGFNPIVEGQVLRIPVPETTEERRLALVKVAHN 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSKISVRNIRRDGMD+LKKS+KSGK SED+  SLEND+QK+TD+TIK+IDSFFEEKK
Sbjct: 121 YAEKSKISVRNIRRDGMDYLKKSKKSGKISEDIAESLENDVQKMTDATIKDIDSFFEEKK 180

Query: 181 KEIMHF 186
           KEIM F
Sbjct: 181 KEIMRF 186


>gi|86357537|ref|YP_469429.1| ribosome recycling factor [Rhizobium etli CFN 42]
 gi|190891610|ref|YP_001978152.1| ribosome recycling factor protein [Rhizobium etli CIAT 652]
 gi|123512098|sp|Q2K8Y4|RRF_RHIEC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238692538|sp|B3PYP5|RRF_RHIE6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|86281639|gb|ABC90702.1| ribosome recycling factor protein [Rhizobium etli CFN 42]
 gi|190696889|gb|ACE90974.1| ribosome recycling factor protein [Rhizobium etli CIAT 652]
 gi|327189225|gb|EGE56404.1| ribosome recycling factor [Rhizobium etli CNPAF512]
          Length = 186

 Score =  231 bits (589), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 112/186 (60%), Positives = 140/186 (75%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ID++ +K RM   +S  K D+ +LRTGR S ++LD V +EAYGS VPLNQVAN+TV
Sbjct: 1   MSEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRVPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV++VERGI ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLTVSVWDKSMVSAVERGIRESNLGLNPIVDGQSLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK+++R++RRDGMD LKK+ K G   +D   +    +QK+TD TI  ID    EK+
Sbjct: 121 YAEKSKVAIRHVRRDGMDGLKKAEKDGVIGQDESRAQSERVQKMTDETISEIDRLLGEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|116251980|ref|YP_767818.1| ribosome recycling factor [Rhizobium leguminosarum bv. viciae 3841]
 gi|241204507|ref|YP_002975603.1| ribosome recycling factor [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|166231215|sp|Q1MH51|RRF_RHIL3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|115256628|emb|CAK07716.1| putative ribosome recycling factor (ribosome releasing factor)
           [Rhizobium leguminosarum bv. viciae 3841]
 gi|240858397|gb|ACS56064.1| ribosome recycling factor [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 186

 Score =  228 bits (582), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 112/186 (60%), Positives = 140/186 (75%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ID++ +K RM   IS  K D+ +LRTGR S ++LD V VEAYGS +PLNQVAN+TV
Sbjct: 1   MSEGIDIKELKRRMDGAISVFKGDIASLRTGRASANILDPVTVEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV++VERGI ESNLGLNPI++GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLSVSVWDKSMVSAVERGIRESNLGLNPIIDGQNLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK+++R++RRDGMD LKK+ K G   +D   +    +QK+TD TI  ID    EK+
Sbjct: 121 YAEKSKVAIRHVRRDGMDGLKKAEKDGVIGQDESRAQSERVQKMTDETISEIDRLLGEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|209549185|ref|YP_002281102.1| ribosome recycling factor [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226749935|sp|B5ZN86|RRF_RHILW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|209534941|gb|ACI54876.1| ribosome recycling factor [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 186

 Score =  228 bits (581), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 111/186 (59%), Positives = 139/186 (74%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M + ID++ +K RM   +S  K D+ +LRTGR S ++LD V +EAYGS +PLNQVAN+TV
Sbjct: 1   MTEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV++VERGI ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLSVSVWDKSMVSAVERGIRESNLGLNPIVDGQSLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK+++R++RRDGMD LKK+ K G   +D   +    +QK+TD TI  ID    EK+
Sbjct: 121 YAEKSKVAIRHVRRDGMDGLKKAEKDGVIGQDEGRAQSERVQKMTDETISEIDRLLGEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|222085860|ref|YP_002544391.1| ribosome recycling factor [Agrobacterium radiobacter K84]
 gi|254809484|sp|B9JEX3|RRF_AGRRK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|221723308|gb|ACM26464.1| ribosome recycling factor [Agrobacterium radiobacter K84]
          Length = 186

 Score =  228 bits (581), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 110/186 (59%), Positives = 140/186 (75%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++  DL+ +K RM   I+  K D+ +LRTGR S ++LD V +EAYGS +PLNQVAN+TV
Sbjct: 1   MSEGTDLKELKRRMDGAIAAFKSDIASLRTGRASANILDPVTIEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +VERGI ESNLGLNPI++GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLSVSVWDKSMVGAVERGIRESNLGLNPIIDGQNLRIPLPELNEERRRSLVKVAHE 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEK+K+++R++RRDGMD LKK+ K G   +D   SL   +QK+TD TI +ID    +K+
Sbjct: 121 YAEKAKVAIRHVRRDGMDGLKKAEKDGDIGQDEGRSLSERVQKMTDETISDIDRLLVDKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|218679110|ref|ZP_03527007.1| ribosome recycling factor [Rhizobium etli CIAT 894]
          Length = 186

 Score =  226 bits (577), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 110/186 (59%), Positives = 139/186 (74%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ID++ +K RM   +S  K D+ +LRTGR S ++LD V +EAYGS +PLNQVAN+TV
Sbjct: 1   MSEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +V+RGI ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLSVSVWDKSMVGAVDRGIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK+++R++RRDGMD LKK+ K G   +D   +    +QK+TD TI  ID    EK+
Sbjct: 121 YAEKSKVAIRHVRRDGMDGLKKAEKDGVIGQDEGRAQSERVQKMTDETISEIDRLLAEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|222148859|ref|YP_002549816.1| ribosome recycling factor [Agrobacterium vitis S4]
 gi|254809485|sp|B9JX30|RRF_AGRVS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|221735845|gb|ACM36808.1| ribosome recycling factor [Agrobacterium vitis S4]
          Length = 186

 Score =  224 bits (572), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 111/186 (59%), Positives = 136/186 (73%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   IDL +IK RM   I+  K D+ +LRTGR S ++LD V VEAYGS V LN VAN+TV
Sbjct: 1   MTAGIDLNDIKRRMDGAINAFKSDLASLRTGRASANILDPVMVEAYGSRVALNTVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VS+WDK MV +V+R I ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLGVSIWDKSMVGAVDRAIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHG 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE SK+++R++RRDGMD LKK+ K G+  +D   SL   +QK+TD TI +ID    EK+
Sbjct: 121 YAENSKVAIRHVRRDGMDSLKKAEKDGEIGKDDARSLSEKLQKMTDDTISDIDRLLAEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|15965251|ref|NP_385604.1| ribosome recycling factor [Sinorhizobium meliloti 1021]
 gi|307309274|ref|ZP_07588942.1| ribosome recycling factor [Sinorhizobium meliloti BL225C]
 gi|307317016|ref|ZP_07596457.1| ribosome recycling factor [Sinorhizobium meliloti AK83]
 gi|22001945|sp|Q92Q52|RRF_RHIME RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|15074431|emb|CAC46077.1| Probable ribosome recycling factor (ribosome releasing factor)
           [Sinorhizobium meliloti 1021]
 gi|306897104|gb|EFN27849.1| ribosome recycling factor [Sinorhizobium meliloti AK83]
 gi|306900275|gb|EFN30892.1| ribosome recycling factor [Sinorhizobium meliloti BL225C]
          Length = 186

 Score =  222 bits (566), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 110/186 (59%), Positives = 137/186 (73%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ +DL+ +K RM   I+  K D+ +LRTGR S ++LD V VEAYGS +PLNQVAN+TV
Sbjct: 1   MSEGVDLKELKRRMDGAIAAFKHDIASLRTGRASANVLDPVTVEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK++VR++RRDGMD LKK+ K G+  +D   +    +QK+TD  I  ID    EK+
Sbjct: 121 YAEKSKVAVRHVRRDGMDDLKKAEKDGEIGQDESRAQSERVQKMTDDVISEIDRLLAEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|150396353|ref|YP_001326820.1| ribosome recycling factor [Sinorhizobium medicae WSM419]
 gi|166231511|sp|A6U8K5|RRF_SINMW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|150027868|gb|ABR59985.1| ribosome recycling factor [Sinorhizobium medicae WSM419]
          Length = 186

 Score =  222 bits (565), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 110/186 (59%), Positives = 137/186 (73%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ +DL+ +K RM   IS  K D+ +LRTGR S ++LD V VEAYGS +PLNQVAN+TV
Sbjct: 1   MSEGVDLKELKRRMDGAISAFKHDIASLRTGRASANVLDPVTVEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEARMLSVSVWDKSMVGAVERAIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK++VR++RRDGMD LKK+ K G+  +D   +    +QK+TD  I  ID    +K+
Sbjct: 121 YAEKSKVAVRHVRRDGMDDLKKAEKDGEIGQDESRAQSERVQKMTDDVISEIDRLLADKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|325292740|ref|YP_004278604.1| Ribosome recycling factor [Agrobacterium sp. H13-3]
 gi|325060593|gb|ADY64284.1| Ribosome recycling factor [Agrobacterium sp. H13-3]
          Length = 185

 Score =  221 bits (564), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 109/182 (59%), Positives = 134/182 (73%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL +IK RM   I+  K D+ +LRTGR S ++LD V +EAYGS VPLNQVAN+TV EPR
Sbjct: 4   IDLNDIKRRMDGAINAFKSDIASLRTGRASANILDPVTIEAYGSRVPLNQVANITVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V++WDK MV +V+R I ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH YAEK
Sbjct: 64  MLGVNIWDKSMVNAVDRAIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHDYAEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           SK+++R++RRDGMD LKK+ K G   +D        +QKITD TI  I+    EK+KEIM
Sbjct: 124 SKVAIRHVRRDGMDGLKKAEKDGDIGQDESRGQSEKVQKITDDTISEIERLLGEKEKEIM 183

Query: 185 HF 186
             
Sbjct: 184 QV 185


>gi|218459807|ref|ZP_03499898.1| ribosome recycling factor [Rhizobium etli Kim 5]
          Length = 177

 Score =  220 bits (560), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 106/176 (60%), Positives = 133/176 (75%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ID++ +K RM   +S  K D+ +LRTGR S ++LD V +EAYGS VPLNQVAN+TV
Sbjct: 1   MSEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRVPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV++VERGI ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLTVSVWDKSMVSAVERGIRESNLGLNPIVDGQSLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
           YAEKSK+++R++RRDGMD LKK+ K G   +D   +    +QK+TD TI  ID   
Sbjct: 121 YAEKSKVAIRHVRRDGMDGLKKAEKDGVIGQDESRAQSERVQKMTDETISEIDRLL 176


>gi|15888703|ref|NP_354384.1| ribosome recycling factor [Agrobacterium tumefaciens str. C58]
 gi|22001938|sp|Q8UFM0|RRF_AGRT5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|15156443|gb|AAK87169.1| ribosome recycling factor [Agrobacterium tumefaciens str. C58]
          Length = 185

 Score =  219 bits (558), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 106/182 (58%), Positives = 134/182 (73%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL +IK RM   I+  K D+ +LRTGR S ++LD V ++AYGS VPLNQVAN+TV EPR
Sbjct: 4   IDLNDIKRRMDGAINAFKSDIASLRTGRASANILDPVTIDAYGSRVPLNQVANITVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V++WDK MV +V+R I ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH Y+EK
Sbjct: 64  MLGVNIWDKSMVNAVDRAIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHEYSEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+++R++RRDGMD LKK+ K G   +D        +QK+TD TI  ID    EK+KEIM
Sbjct: 124 AKVAIRHVRRDGMDGLKKAEKDGDIGQDESRGQSEKVQKMTDDTISEIDRLLAEKEKEIM 183

Query: 185 HF 186
             
Sbjct: 184 QV 185


>gi|163760886|ref|ZP_02167965.1| ribosome recycling factor [Hoeflea phototrophica DFL-43]
 gi|162281930|gb|EDQ32222.1| ribosome recycling factor [Hoeflea phototrophica DFL-43]
          Length = 186

 Score =  219 bits (557), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 107/186 (57%), Positives = 136/186 (73%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D + +K RM   I+  K D+ +LRTGR S ++LD V VEAYGS VPLNQVANVTV
Sbjct: 1   MSDAADSKELKRRMDGAINAFKSDIASLRTGRASANVLDPVMVEAYGSKVPLNQVANVTV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK+MV +V+RGI E+NLGLNPIV+GQ LRIP+PE  EERR +LVKV+H 
Sbjct: 61  PEPRMLGVSVWDKQMVGAVDRGIREANLGLNPIVDGQNLRIPLPELNEERRKSLVKVSHT 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE +++++RN+RRDGMD LKK+ K G  S+D      + +QK+TD  I  ID    +K+
Sbjct: 121 YAENARVAIRNVRRDGMDTLKKAEKDGDISQDDSRRESDQVQKMTDEMISEIDRLLVDKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|227821900|ref|YP_002825870.1| ribosome recycling factor [Sinorhizobium fredii NGR234]
 gi|254809525|sp|C3MBQ5|RRF_RHISN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|227340899|gb|ACP25117.1| ribosome recycling factor [Sinorhizobium fredii NGR234]
          Length = 186

 Score =  218 bits (556), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 107/186 (57%), Positives = 136/186 (73%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ++L+ +K RM   I+  K D+ +LRTGR S ++LD V VEAYGS +PLNQVAN+ V
Sbjct: 1   MSEGVELKELKRRMDGAIAAFKHDIASLRTGRASANVLDPVTVEAYGSRMPLNQVANIMV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +V+R I ESNLGLNPI++GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLSVSVWDKTMVGAVDRAIRESNLGLNPIIDGQNLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK++VR++RRDGMD LKK+ K G   +D   +    +QK+TD  I  ID    EK+
Sbjct: 121 YAEKSKVAVRHVRRDGMDGLKKAEKDGDIGQDESRAQSERVQKMTDEVISEIDRLLAEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|90419595|ref|ZP_01227505.1| ribosome recycling factor [Aurantimonas manganoxydans SI85-9A1]
 gi|90336532|gb|EAS50273.1| ribosome recycling factor [Aurantimonas manganoxydans SI85-9A1]
          Length = 185

 Score =  210 bits (535), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 103/182 (56%), Positives = 129/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +DL  +K RM   I+ LK D+  LRTGR SPS+LD + V+AYGS +PLNQVANV+V EPR
Sbjct: 4   MDLNELKRRMDGAITSLKSDLTGLRTGRASPSLLDPIYVDAYGSKMPLNQVANVSVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V+VWDK+MV  VER I ESNLGLNPI +G  LRIP+PE  E+RR  LVKVAH YAE 
Sbjct: 64  MVTVTVWDKQMVGKVERAIRESNLGLNPITDGATLRIPLPELNEQRRKELVKVAHQYAEG 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDGM+ LKK  K G   +D      + +QK+TD TI  IDS    K+ EIM
Sbjct: 124 AKVAVRHVRRDGMETLKKLEKDGDIGQDESRQQSDRVQKMTDETISEIDSALAVKEAEIM 183

Query: 185 HF 186
             
Sbjct: 184 QV 185


>gi|118590008|ref|ZP_01547412.1| ribosome releasing factor [Stappia aggregata IAM 12614]
 gi|118437505|gb|EAV44142.1| ribosome releasing factor [Stappia aggregata IAM 12614]
          Length = 187

 Score =  208 bits (530), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 96/179 (53%), Positives = 132/179 (73%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +DL ++K RM   +S LK +   LRTGR S SM+D + VEAYG  +P+NQVA V+V EPR
Sbjct: 6   VDLDDLKRRMQGALSVLKTEFAGLRTGRASSSMMDPITVEAYGQSMPINQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V VWDK MV++VE+ I ESNLGLNP+V+G +LR+P+PE  +ERR  L+KVAH YAE+
Sbjct: 66  MLAVQVWDKSMVSAVEKAIRESNLGLNPVVDGMLLRLPIPELNQERRQELIKVAHKYAEQ 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +K+S+R++RRDGMD  KK+ K G  S+D      +++QK+TD  I  +DS  E+K++EI
Sbjct: 126 AKVSIRHVRRDGMDAAKKAEKDGDISQDDSRVASDEVQKLTDQMIAEVDSMLEKKEQEI 184


>gi|298291819|ref|YP_003693758.1| ribosome recycling factor [Starkeya novella DSM 506]
 gi|296928330|gb|ADH89139.1| ribosome recycling factor [Starkeya novella DSM 506]
          Length = 187

 Score =  208 bits (530), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 99/180 (55%), Positives = 135/180 (75%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID+ ++K RM   I+ LK+++  LRTGR S S+L+ ++V+AYGSH+PLNQVA+V V EPR
Sbjct: 6   IDIADLKRRMQGAIAVLKQELSGLRTGRASASLLEPIQVDAYGSHMPLNQVASVNVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWD+ MVA+VE+ I ESNLGLNP  EGQVLR+ +PE T++RR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDRGMVAAVEKAIRESNLGLNPQTEGQVLRVRIPELTQDRRQELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++SVR++RRDG+D LKK+ K G+ S D +  L + +QK TD +I  ID     K+KEI+
Sbjct: 126 ARVSVRHVRRDGLDALKKAEKDGEMSSDDLDRLADQVQKATDQSITEIDQTLSTKEKEIL 185


>gi|254469349|ref|ZP_05082754.1| ribosome recycling factor [Pseudovibrio sp. JE062]
 gi|211961184|gb|EEA96379.1| ribosome recycling factor [Pseudovibrio sp. JE062]
          Length = 185

 Score =  205 bits (521), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 97/179 (54%), Positives = 131/179 (73%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++  RM   I+ LK +   LRTGR S SMLD + V+AYG+ +P+NQVA V+V EPR
Sbjct: 4   LDYDDLDRRMNGAITALKHEFAGLRTGRASASMLDTISVDAYGAPMPINQVATVSVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V VWDK MVA+ E+ I ES+LGLNP+V+GQ+LR+P+PE  EERR  LVKVAH YAE+
Sbjct: 64  MLSVQVWDKSMVAATEKAIRESSLGLNPVVDGQILRLPIPELNEERRQELVKVAHKYAEQ 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +KI+ R++RRDGMD +KK  K+G+ SED   S  + +QK+TD  I  +DS   +K++EI
Sbjct: 124 AKIAARHVRRDGMDTIKKLEKAGEMSEDDARSASDMVQKMTDDIIGEVDSVLAKKEQEI 182


>gi|254504672|ref|ZP_05116823.1| ribosome recycling factor [Labrenzia alexandrii DFL-11]
 gi|222440743|gb|EEE47422.1| ribosome recycling factor [Labrenzia alexandrii DFL-11]
          Length = 187

 Score =  204 bits (519), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 93/179 (51%), Positives = 131/179 (73%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +DL ++K RM   +S LK D   LRTGR S SMLD + V+AYG  +PL+QV  V+V EPR
Sbjct: 6   VDLDDLKRRMQGALSSLKTDFSGLRTGRASASMLDPISVDAYGQSMPLSQVGTVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ + VWDK MVA+VE+ I ESNLGLNP+V+GQ+LR+P+PE  +ERR  L+KVAH YAE+
Sbjct: 66  MVAIQVWDKSMVAAVEKAIRESNLGLNPVVDGQLLRLPIPELNQERRQELIKVAHKYAEQ 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +K+++R++RRDGMD  KK+ K G+ S+D      +++QK+TD  I  +D+   +K+ EI
Sbjct: 126 AKVAIRHVRRDGMDDAKKAEKDGEISQDDSRVASDEVQKLTDGMIGEVDAMLAKKEAEI 184


>gi|260459217|ref|ZP_05807472.1| ribosome recycling factor [Mesorhizobium opportunistum WSM2075]
 gi|259034771|gb|EEW36027.1| ribosome recycling factor [Mesorhizobium opportunistum WSM2075]
          Length = 184

 Score =  204 bits (519), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 95/177 (53%), Positives = 129/177 (72%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K RM   I+  K D+ +LRTGR S ++LD ++V+AYG+ +P+NQVANVTV EPRM+ V
Sbjct: 7   DLKRRMDGAIAAFKHDLASLRTGRASSNLLDAIQVQAYGTTMPINQVANVTVPEPRMISV 66

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           SVWDK MV++V+R I ESNLG NPIV+G  LRIP+PE  E+RR  LVK++H YAE ++++
Sbjct: 67  SVWDKSMVSAVDRAIRESNLGFNPIVDGTNLRIPLPELNEQRRKELVKISHGYAENARVA 126

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            R++RRDGMD LKK+ K G  SED      + +QK+TD TI  ID    +K+ EIM 
Sbjct: 127 ARHVRRDGMDFLKKAEKDGDISEDDHRKRSDQVQKLTDETISTIDHLLSDKEAEIMQ 183


>gi|13470840|ref|NP_102409.1| ribosome recycling factor [Mesorhizobium loti MAFF303099]
 gi|22001948|sp|Q98MB8|RRF_RHILO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|14021583|dbj|BAB48195.1| ribosome releasing factor [Mesorhizobium loti MAFF303099]
          Length = 184

 Score =  203 bits (516), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 94/177 (53%), Positives = 128/177 (72%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K RM   I+  K D+ +LRTGR S ++LD ++V+AYG+ +P+NQVANVTV EPRM+ V
Sbjct: 7   DLKRRMDGAIAAFKHDLASLRTGRASSNLLDAIQVQAYGTTMPINQVANVTVPEPRMISV 66

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S+WDK MV +V+R I ESNLG NPIV+G  LRIP+PE  E+RR  LVK++H YAE ++++
Sbjct: 67  SIWDKSMVGAVDRAIRESNLGFNPIVDGTNLRIPLPELNEQRRKELVKISHGYAENARVA 126

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            R++RRDGMD LKK+ K G  SED      + +QK+TD TI  ID    +K+ EIM 
Sbjct: 127 ARHVRRDGMDFLKKAEKDGVISEDDQRKRSDQVQKLTDETISTIDHLLSDKEAEIMQ 183


>gi|319783668|ref|YP_004143144.1| ribosome recycling factor [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169556|gb|ADV13094.1| ribosome recycling factor [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 184

 Score =  203 bits (516), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 94/177 (53%), Positives = 128/177 (72%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K RM   I+  K D+ +LRTGR S ++LD ++V+AYG+ +P+NQVANV+V EPRM+ V
Sbjct: 7   DLKRRMDGAIAAFKHDLASLRTGRASSNLLDAIQVQAYGTTMPINQVANVSVPEPRMISV 66

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           SVWDK MV +V+R I ESNLG NPIV+G  LRIP+PE  E+RR  LVK++H YAE ++++
Sbjct: 67  SVWDKSMVGAVDRAIRESNLGFNPIVDGTNLRIPLPELNEQRRKELVKISHTYAENARVA 126

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            R++RRDGMD LKK+ K G  SED      + +QK+TD TI  ID    +K+ EIM 
Sbjct: 127 ARHVRRDGMDFLKKAEKDGDISEDDQRKRSDQVQKLTDETISTIDHLLSDKEAEIMQ 183


>gi|75676047|ref|YP_318468.1| ribosome recycling factor [Nitrobacter winogradskyi Nb-255]
 gi|123613278|sp|Q3SRH5|RRF_NITWN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|74420917|gb|ABA05116.1| ribosome recycling factor [Nitrobacter winogradskyi Nb-255]
          Length = 187

 Score =  202 bits (513), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 129/180 (71%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+ ++K RM      LK ++  LRTGR S SMLD V+V+AYGSH+PLNQVA ++V EPR
Sbjct: 6   FDIGDLKRRMQGATQSLKHELGGLRTGRASSSMLDPVQVDAYGSHMPLNQVATISVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDG+D LKK  K+ + SED    L ND+QK TDS I  ID     K+KEI+
Sbjct: 126 AKVAVRHVRRDGLDTLKKLEKNHEISEDDEKRLANDVQKATDSVISEIDQLLAGKEKEIL 185


>gi|154248356|ref|YP_001419314.1| ribosome recycling factor [Xanthobacter autotrophicus Py2]
 gi|238686805|sp|A7INR3|RRF_XANP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|154162441|gb|ABS69657.1| ribosome recycling factor [Xanthobacter autotrophicus Py2]
          Length = 187

 Score =  202 bits (513), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 96/181 (53%), Positives = 129/181 (71%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
             D+ ++K RM   +  L+ ++  LRTGR S S+LD + +EAYG+ +PLNQVA V+V E 
Sbjct: 5   TFDMSDLKRRMQGAVGVLRDELGGLRTGRASASLLDPITIEAYGARMPLNQVATVSVPEA 64

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R+L V VWD+ MV++VE+ I +SNLGLNP  EGQVLR+ +PE  +ERR  LVKVAH YAE
Sbjct: 65  RLLSVQVWDRGMVSAVEKAIRDSNLGLNPNTEGQVLRLRIPELNQERRQELVKVAHKYAE 124

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +K++VR++RRDGMDHLKK  K G+ S D +  L  D+QK TD TI  ID    +K+KEI
Sbjct: 125 AAKVAVRHVRRDGMDHLKKVEKDGEMSSDDLDRLSKDVQKATDETIAEIDQTLAQKEKEI 184

Query: 184 M 184
           +
Sbjct: 185 L 185


>gi|49474293|ref|YP_032335.1| ribosome recycling factor [Bartonella quintana str. Toulouse]
 gi|60390253|sp|Q6FZN3|RRF_BARQU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|49239797|emb|CAF26187.1| Ribosome recycling factor [Bartonella quintana str. Toulouse]
          Length = 186

 Score =  202 bits (513), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 100/186 (53%), Positives = 131/186 (70%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN +  + ++K RM   IS  + ++  LRTGR S S+L+ + VEAYGS V +NQVAN++V
Sbjct: 1   MNVLSIMDDLKRRMDGAISAFQHELGGLRTGRASASLLEPLTVEAYGSVVHINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PEPRMLSVSVWDKTMVGAVERAIRDSGLGLNPITDGMNLRIPLPELNEERRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+++++ R++RRDGMD+LKK  K G+ S+D    L   +QK+TD TI NID     K+
Sbjct: 121 YAEQARVATRHVRRDGMDNLKKLEKEGEISQDEAHGLSEKVQKLTDETIANIDKILAVKE 180

Query: 181 KEIMHF 186
            EIMH 
Sbjct: 181 SEIMHV 186


>gi|83858385|ref|ZP_00951907.1| ribosome releasing factor [Oceanicaulis alexandrii HTCC2633]
 gi|83853208|gb|EAP91060.1| ribosome releasing factor [Oceanicaulis alexandrii HTCC2633]
          Length = 185

 Score =  201 bits (512), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 94/181 (51%), Positives = 127/181 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+++I+ RM   I  LKK+   LRTGR S S+LD +KVEAYG+  P+NQV NV+V EPR
Sbjct: 4   FDIKDIERRMDGAIDALKKEFGGLRTGRASASLLDPIKVEAYGALTPINQVGNVSVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ +SVWDK +  +VE+ I  S+LGLNP+ EG+ LRIP+P   EERR  L K A AYAE 
Sbjct: 64  MITISVWDKNLAGAVEKAIRNSSLGLNPVSEGETLRIPIPPLNEERRNELAKTAGAYAEN 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++I+VRN+RRDGMD LK+  K G+ SED    L + IQK+TD+ +  ID+  + K++EI 
Sbjct: 124 ARIAVRNVRRDGMDQLKRDEKDGEISEDQHKKLADQIQKLTDAKVSAIDALLKTKQEEIT 183

Query: 185 H 185
            
Sbjct: 184 Q 184


>gi|307942145|ref|ZP_07657496.1| ribosome recycling factor [Roseibium sp. TrichSKD4]
 gi|307774431|gb|EFO33641.1| ribosome recycling factor [Roseibium sp. TrichSKD4]
          Length = 187

 Score =  201 bits (512), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 91/179 (50%), Positives = 131/179 (73%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +DL ++  RM   +S LK +   LRTGR S SMLD + V+AYG  +PLNQV  V V EPR
Sbjct: 6   VDLDDLSRRMQGALSVLKTEFSGLRTGRASASMLDPISVDAYGQSMPLNQVGTVNVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ + VWDK MV++VE+ I ESNLGLNP+V+GQ+LR+P+PE  +ERR  L+KVAH YAE+
Sbjct: 66  MVAIQVWDKGMVSAVEKAIRESNLGLNPVVDGQLLRLPIPELNQERRQELIKVAHKYAEQ 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +K+++R++RRDGMD  KK+ K G  S+D +    +++QK+TD+ I  +D+   +K++EI
Sbjct: 126 AKVAIRHVRRDGMDTAKKAEKDGDISQDDLHVASDEVQKLTDAKIAEVDTMLAKKEQEI 184


>gi|23010622|ref|ZP_00051247.1| COG0233: Ribosome recycling factor [Magnetospirillum
           magnetotacticum MS-1]
          Length = 187

 Score =  201 bits (510), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 95/182 (52%), Positives = 129/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL +IK RM   +S L KD+ +LRTGR +PS+LD ++VEAYG+ +P+ QVA V+V EPR
Sbjct: 6   FDLGDIKRRMQGAVSSLSKDLGSLRTGRATPSLLDPIQVEAYGASMPMAQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L +SVWD+ MV +VE+ I ES+LGLNP+ EGQ +R+ +PE  E+RR  +VKVAH YAE+
Sbjct: 66  LLSISVWDRSMVTNVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYAEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K G  SED       D+QK TD  I  ID     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDILKKLEKDGAISEDDEKRQAGDVQKATDDAIAEIDGVLASKEKEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|328543714|ref|YP_004303823.1| ribosome-recycling factor [polymorphum gilvum SL003B-26A1]
 gi|326413458|gb|ADZ70521.1| Ribosome-recycling factor [Polymorphum gilvum SL003B-26A1]
          Length = 173

 Score =  201 bits (510), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 92/170 (54%), Positives = 125/170 (73%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +S LK ++  LRTGR S SM+D + V AYG  +P+NQVA V+V EPRM+ V VWDK
Sbjct: 1   MQGALSVLKTELAGLRTGRASSSMMDAIVVNAYGQSMPINQVATVSVPEPRMVAVQVWDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            MV +VER I ESNLGLNP+V+GQ+LR+P+PE  +ERR  L+KVAH YAE++K+++R++R
Sbjct: 61  SMVGAVERAIRESNLGLNPVVDGQLLRLPIPELNQERRQELIKVAHKYAEQAKVAIRHVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RDGMD +KK  K G  S+D      +D+QK+TD  I  +DS  E+K++EI
Sbjct: 121 RDGMDMIKKLEKDGAISQDDSRVAADDVQKLTDREIAEVDSMLEKKQQEI 170


>gi|121602369|ref|YP_988895.1| ribosome recycling factor [Bartonella bacilliformis KC583]
 gi|48474236|sp|Q8RT64|RRF_BARBK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|18920725|gb|AAL82407.1|AF469610_3 ribosome recycling factor [Bartonella bacilliformis]
 gi|120614546|gb|ABM45147.1| ribosome recycling factor [Bartonella bacilliformis KC583]
          Length = 186

 Score =  200 bits (509), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 97/179 (54%), Positives = 128/179 (71%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + ++K RM   IS  K ++  LRTGR S S+L+ + VEAYGS VP+ QVAN++VLEPRML
Sbjct: 7   MDDLKRRMDGAISAFKHELSGLRTGRASASLLEPLTVEAYGSVVPIKQVANISVLEPRML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            VSVWDK MV +VER I +   GLNPIV+G  LRIP+PE  EERR  LVK+AH YAE+++
Sbjct: 67  SVSVWDKTMVGAVERAIRDCGFGLNPIVDGMNLRIPLPELNEERRKELVKIAHQYAEQAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++R++RRDGMD+LKK  K G+ S+D   SL   +QK+TD  I +ID     K+ EIM 
Sbjct: 127 VAIRHVRRDGMDNLKKLEKEGEISQDEARSLSEKVQKLTDDAIADIDKILIMKETEIMQ 185


>gi|110633737|ref|YP_673945.1| ribosome recycling factor [Mesorhizobium sp. BNC1]
 gi|123353709|sp|Q11IJ5|RRF_MESSB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110284721|gb|ABG62780.1| ribosome recycling factor [Chelativorans sp. BNC1]
          Length = 186

 Score =  200 bits (508), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 93/184 (50%), Positives = 130/184 (70%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   ID +++  R    I+  K D+ +LRTGR S ++LD + V+AYG+ +P+NQVA V+V
Sbjct: 1   MPDGIDFKDLHRRFDGAIAAFKHDIASLRTGRASANLLDPIHVDAYGASMPVNQVATVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+ VSVWD+ +V +V+R I E+NLG NPIVEG  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PEPRMISVSVWDQSLVGAVDRAIREANLGFNPIVEGSTLRIPLPELNEERRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++ R++RRDGM+HLKK+ K G+ S+D      + +QK+TD TI  ID    EK+
Sbjct: 121 YAEHARVAARHVRRDGMEHLKKAEKDGEISQDEARVQSDRVQKMTDETIAAIDKLLAEKE 180

Query: 181 KEIM 184
            EI+
Sbjct: 181 VEIL 184


>gi|85716993|ref|ZP_01047956.1| ribosome recycling factor [Nitrobacter sp. Nb-311A]
 gi|85696195|gb|EAQ34090.1| ribosome recycling factor [Nitrobacter sp. Nb-311A]
          Length = 187

 Score =  199 bits (507), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 99/180 (55%), Positives = 128/180 (71%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+ ++K RM      LK ++  LRTGR S SMLD V+V+AYGSH+PLNQVA ++V EPR
Sbjct: 6   FDIGDLKRRMQGATQSLKHELGGLRTGRASASMLDPVQVDAYGSHMPLNQVATISVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDG+D LKK  K+ + SED    L N++QK TD  I  ID     K+KEI+
Sbjct: 126 AKVAVRHVRRDGLDTLKKLEKTHEISEDDEKRLANEVQKATDGVISEIDQLLAGKEKEIL 185


>gi|114704873|ref|ZP_01437781.1| ribosome releasing factor [Fulvimarina pelagi HTCC2506]
 gi|114539658|gb|EAU42778.1| ribosome releasing factor [Fulvimarina pelagi HTCC2506]
          Length = 185

 Score =  199 bits (505), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/181 (51%), Positives = 125/181 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  ++K RM   I   K D+  LRTGR SP++LD V V+AYG+ +P+NQVAN++V EPR
Sbjct: 4   FDFDDLKRRMDGAIQSFKGDLAGLRTGRASPNLLDPVMVDAYGTQMPVNQVANISVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ++ V+VWDK+MV  VER I ESNLGLNP+ +G  LRIP+PE  E+RR  LVKVA  YAE+
Sbjct: 64  LVSVTVWDKQMVGKVERAIRESNLGLNPVTDGTTLRIPLPELNEQRRKELVKVAQQYAEQ 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDGMD LKK  K G   +D    +   +QK+TD  +  ID     K++EIM
Sbjct: 124 AKVAVRHVRRDGMDSLKKMEKDGDIGQDDNRQMSERVQKMTDDAVSEIDRTLATKEQEIM 183

Query: 185 H 185
            
Sbjct: 184 Q 184


>gi|49475413|ref|YP_033454.1| ribosome recycling factor [Bartonella henselae str. Houston-1]
 gi|60390254|sp|Q6G5C6|RRF_BARHE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|49238219|emb|CAF27429.1| Ribosome recycling factor [Bartonella henselae str. Houston-1]
          Length = 186

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 97/180 (53%), Positives = 127/180 (70%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + ++K RM   IS  K ++  LRTGR S S+L+ + VEAYGS V +NQVAN++V EPRML
Sbjct: 7   MDDLKRRMHGAISAFKHELGGLRTGRASASLLEPLTVEAYGSVVHINQVANISVPEPRML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+AH YAE+++
Sbjct: 67  SVSVWDKTMVGAVERAIRDSGLGLNPITDGMNLRIPLPELNEERRKELVKIAHQYAEQAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++ R++RRDGMD+LKK  K G+  +D    L   +QK+TD TI +ID     K+ EIMH 
Sbjct: 127 VATRHVRRDGMDNLKKLEKEGEIGQDEAHGLSEKVQKLTDETIADIDKILAVKESEIMHV 186


>gi|316933924|ref|YP_004108906.1| ribosome recycling factor [Rhodopseudomonas palustris DX-1]
 gi|315601638|gb|ADU44173.1| ribosome recycling factor [Rhodopseudomonas palustris DX-1]
          Length = 186

 Score =  198 bits (504), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 97/184 (52%), Positives = 132/184 (71%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+  +K RM      LK ++  LRTGR S SML+ V+V+AYGSH+PLNQVA V+V
Sbjct: 1   MSDKFDINELKRRMQGAAQSLKHELGGLRTGRASASMLEPVQVDAYGSHMPLNQVATVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR++ V VWDK MV +VE+GI +SNLGL+P  EGQV+R+ +PE  EERR  LVKVAH 
Sbjct: 61  PEPRLISVQVWDKSMVKAVEKGIVDSNLGLSPATEGQVIRLRIPELNEERRKELVKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++VR++RRDG+D +KK  K+ + SED    L+ ++QK TD+TI  ID     K+
Sbjct: 121 YAEAARVAVRHVRRDGLDTIKKLEKAHEISEDDQKRLDTEVQKATDATIGEIDQLLANKE 180

Query: 181 KEIM 184
           KEI+
Sbjct: 181 KEIL 184


>gi|27379969|ref|NP_771498.1| ribosome recycling factor [Bradyrhizobium japonicum USDA 110]
 gi|34924950|sp|Q89KP6|RRF_BRAJA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|27353122|dbj|BAC50123.1| ribosome recycling factor [Bradyrhizobium japonicum USDA 110]
          Length = 188

 Score =  198 bits (503), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 98/180 (54%), Positives = 128/180 (71%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL  +K RM   +  LK ++  LRTGR S SMLD V+VEAYGSH+PLNQ+A V+V EPR
Sbjct: 7   FDLNEVKRRMQGAVQSLKHELGGLRTGRASASMLDPVQVEAYGSHMPLNQLATVSVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ++ V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  EERR  LVKVAH YAE 
Sbjct: 67  LISVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEA 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++ R++RRDG+D LKK  K+ + SED      +++QK+TD TI  ID     K+KEI+
Sbjct: 127 AKVAARHVRRDGLDVLKKLEKNHEMSEDDQKRHADEVQKVTDGTIAEIDQLLAAKEKEIL 186


>gi|240850307|ref|YP_002971700.1| ribosome recycling factor [Bartonella grahamii as4aup]
 gi|240267430|gb|ACS51018.1| ribosome recycling factor [Bartonella grahamii as4aup]
          Length = 186

 Score =  198 bits (503), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 98/186 (52%), Positives = 130/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    + ++K RM   I+  K ++  LRTGR S S+L+ + VE+YGS V +NQVAN++V
Sbjct: 1   MNVTSIMDDLKRRMDGAITAFKHELGGLRTGRASASLLEPLTVESYGSVVHINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PEPRMLSVSVWDKTMVGAVERAIRDSGLGLNPITDGTNLRIPLPELNEERRKELVKIAHH 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+++++ R++RRDGMD+LKK  K G+  +D   SL   +QK+TD TI +ID     K+
Sbjct: 121 YAEQARVATRHVRRDGMDNLKKLEKDGEIGQDEAHSLSEKVQKLTDETIADIDKILAVKE 180

Query: 181 KEIMHF 186
            EIMH 
Sbjct: 181 SEIMHV 186


>gi|94496939|ref|ZP_01303513.1| ribosome recycling factor [Sphingomonas sp. SKA58]
 gi|94423615|gb|EAT08642.1| ribosome recycling factor [Sphingomonas sp. SKA58]
          Length = 185

 Score =  197 bits (502), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 94/179 (52%), Positives = 125/179 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  +++ RM   +  LK D+  LRTGR +  +LD V VE YG+H+PLNQVA V+  EPRM
Sbjct: 5   DKADLERRMAGAVESLKGDLTGLRTGRANVQLLDPVTVEVYGAHMPLNQVATVSAPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWDK  V   ++ I  + LGLNPIV+GQ LR+P+P+ TEERR  L K+A  YAE +
Sbjct: 65  LSVQVWDKSNVGPCDKAIRSAGLGLNPIVDGQTLRLPIPDLTEERRKELAKLASKYAEGA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++VRN+RRDGMD+LK   K G+ SED    LE ++QK+TDSTI +IDS    K+KEI+
Sbjct: 125 RVAVRNVRRDGMDNLKADEKKGEISEDERKRLETEVQKLTDSTIADIDSVTSAKEKEIL 183


>gi|319408398|emb|CBI82053.1| Ribosome recycling factor [Bartonella schoenbuchensis R1]
          Length = 186

 Score =  197 bits (501), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 96/185 (51%), Positives = 129/185 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    + ++K RM   +S  K ++  LRTGR S S+L+ + VEAYGS VP+ QVAN++V
Sbjct: 1   MNVTSMMDDLKRRMDGAVSAFKHELSGLRTGRASASLLEPLTVEAYGSTVPIQQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +VER I +S LG NPI +G  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PEPRMLSVSVWDKTMVGAVERAIRDSGLGFNPITDGMNLRIPIPELNEERRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+++++ R++RRDGMD+LKK  K G+ S+D   +L   +QK+TD TI +ID     K+
Sbjct: 121 YAEQARVAARHVRRDGMDNLKKLEKEGEISQDESRNLSEKVQKLTDETITDIDKILGVKE 180

Query: 181 KEIMH 185
            +IM 
Sbjct: 181 ADIMQ 185


>gi|163868104|ref|YP_001609308.1| ribosome recycling factor [Bartonella tribocorum CIP 105476]
 gi|189044045|sp|A9ISK9|RRF_BART1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|161017755|emb|CAK01313.1| Ribosome recycling factor [Bartonella tribocorum CIP 105476]
          Length = 186

 Score =  197 bits (500), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 98/185 (52%), Positives = 129/185 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    + ++K RM   I   K ++  LRTGR S S+L+ + VE+YGS V +NQVAN++V
Sbjct: 1   MNVASIMDDLKRRMDGAIVAFKHELGGLRTGRASASLLEPLTVESYGSVVHINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PEPRMLFVSVWDKTMVGAVERAIRDSGLGLNPITDGTNLRIPLPELNEERRKELVKIAHH 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+++++ R++RRDGMD+LKK  K G+  +D   SL   +QK+TD TI +ID     K+
Sbjct: 121 YAEQARVATRHVRRDGMDNLKKLEKDGEIGQDEAHSLSEKVQKLTDETIADIDKILAVKE 180

Query: 181 KEIMH 185
            EIMH
Sbjct: 181 SEIMH 185


>gi|302383605|ref|YP_003819428.1| ribosome recycling factor [Brevundimonas subvibrioides ATCC 15264]
 gi|302194233|gb|ADL01805.1| ribosome recycling factor [Brevundimonas subvibrioides ATCC 15264]
          Length = 185

 Score =  197 bits (500), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 96/181 (53%), Positives = 126/181 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL+  +DRM   ++ LK++   LRTGR +  +LD V+V+AYGS  PLN VA ++V EPRM
Sbjct: 5   DLKTYRDRMDRAVTSLKEEFQGLRTGRANAGLLDPVQVQAYGSTSPLNAVAAISVPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + VSVWDK MV  VE+ I  + LGLNPIV+GQ LRIPVP  TEERR  L K+A  YAE+ 
Sbjct: 65  ISVSVWDKSMVGPVEKAIRAAGLGLNPIVDGQTLRIPVPPLTEERRKELAKLAGKYAEQQ 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           KI+VRN+RRD  D LKK+ K+G+ S+D    +E ++QK TD+ IK ID   + K+ EIM 
Sbjct: 125 KIAVRNVRRDANDDLKKAEKAGEISQDDQKKMETEVQKDTDAAIKRIDETLKTKEVEIMQ 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|319899040|ref|YP_004159133.1| Ribosome recycling factor [Bartonella clarridgeiae 73]
 gi|319403004|emb|CBI76559.1| Ribosome recycling factor [Bartonella clarridgeiae 73]
          Length = 186

 Score =  197 bits (500), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 98/186 (52%), Positives = 129/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+  + + ++K RM   IS  + ++ +LRTGR S S+L+ + VEAYGS VP+NQVAN++V
Sbjct: 1   MDITLIMDDLKRRMEGAISSFRHELGSLRTGRASASLLEHLTVEAYGSVVPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK M+  VER I +S LGLNPI EG  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKTMIGVVERAIRDSGLGLNPITEGMNLRIPLPELNEERRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+++IS R++RRDGMD+LKK  K G+  +D   SL   +QK+TD T+  ID     K+
Sbjct: 121 YAEQARISARHVRRDGMDNLKKLEKEGEIGQDEARSLSEKVQKLTDETVAEIDKILVLKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 TEIMQV 186


>gi|170749846|ref|YP_001756106.1| ribosome recycling factor [Methylobacterium radiotolerans JCM 2831]
 gi|190360252|sp|B1LTQ4|RRF_METRJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|170656368|gb|ACB25423.1| ribosome recycling factor [Methylobacterium radiotolerans JCM 2831]
          Length = 187

 Score =  197 bits (500), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 93/181 (51%), Positives = 127/181 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL +IK RM   ++ L KD+ +LRTGR +PS+LD ++V+AYGS +P+ QVA V+V EPR
Sbjct: 6   FDLNDIKRRMQGAVASLSKDLGSLRTGRATPSLLDPIQVDAYGSMMPMAQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L +SVWD+ MV +VE+ I ES+LGLNP  EGQ +R+ +PE  E+RR  +VKVAH Y E+
Sbjct: 66  LLSISVWDRSMVTAVEKAIRESDLGLNPQTEGQTIRLRIPEMNEQRRKEMVKVAHKYTEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+DHLKK  K    SED       D+QK TD  I  ID     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDHLKKLLKDSAISEDDEKRQATDVQKATDQYIAEIDGVLASKEKEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|188581299|ref|YP_001924744.1| ribosome recycling factor [Methylobacterium populi BJ001]
 gi|238692901|sp|B1ZLC8|RRF_METPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|179344797|gb|ACB80209.1| ribosome recycling factor [Methylobacterium populi BJ001]
          Length = 187

 Score =  197 bits (500), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 93/182 (51%), Positives = 128/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL +IK RM   +S L KD+ +LRTGR +PS+LD ++VEAYG+ +P+ QVA V+V EPR
Sbjct: 6   FDLGDIKRRMQGAVSSLSKDLGSLRTGRATPSLLDPIQVEAYGASMPMAQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L +SVWD+ MV +VE+ I ES+LGLNP+ EGQ +R+ +PE  E+RR  +VKVAH Y E+
Sbjct: 66  LLSISVWDRSMVTNVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYTEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K G  SED       ++QK TD  I  ID     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDILKKLEKDGAISEDDEKRQAGEVQKATDDAIAEIDGVLASKEKEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|39935984|ref|NP_948260.1| ribosome recycling factor [Rhodopseudomonas palustris CGA009]
 gi|192291637|ref|YP_001992242.1| ribosome recycling factor [Rhodopseudomonas palustris TIE-1]
 gi|47116997|sp|P61309|RRF_RHOPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229564263|sp|B3Q7K1|RRF_RHOPT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39649838|emb|CAE28360.1| ribosome releasing factor [Rhodopseudomonas palustris CGA009]
 gi|192285386|gb|ACF01767.1| ribosome recycling factor [Rhodopseudomonas palustris TIE-1]
          Length = 186

 Score =  196 bits (499), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 96/184 (52%), Positives = 131/184 (71%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+  +K RM      LK ++  LRTGR S SML+ V+V+AYGSH+PLNQVA V+V
Sbjct: 1   MSDKFDVNELKRRMQGAAQSLKHELGGLRTGRASASMLEPVQVDAYGSHMPLNQVATVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR++ V VWDK MV +VE+GI +SNLGL+P  EGQV+R+ +PE  EERR  LVKVAH 
Sbjct: 61  PEPRLISVQVWDKSMVKAVEKGIVDSNLGLSPATEGQVIRLRIPELNEERRKELVKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++VR++RRDG+D +KK  K+ + SED    L+ ++QK TD+ I  ID     K+
Sbjct: 121 YAEAARVAVRHVRRDGLDTIKKLEKAHEISEDDQKRLDQEVQKATDAAIAEIDQLLANKE 180

Query: 181 KEIM 184
           KEI+
Sbjct: 181 KEIL 184


>gi|295689595|ref|YP_003593288.1| ribosome recycling factor [Caulobacter segnis ATCC 21756]
 gi|295431498|gb|ADG10670.1| ribosome recycling factor [Caulobacter segnis ATCC 21756]
          Length = 188

 Score =  196 bits (499), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 97/180 (53%), Positives = 125/180 (69%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +DRM   ++ LK++  +LRTGR S S+LD V VEAYGS  PLN VA+V+V EPR +
Sbjct: 9   LSRYRDRMDKAVAALKEEFGSLRTGRASASLLDQVMVEAYGSTTPLNAVASVSVPEPRQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            VSVWD+ +V SVE+ I  S LGLNP+VEGQ LRIP+P  TEERR  L K+A  YAE+ K
Sbjct: 69  NVSVWDRGVVVSVEKAIRASGLGLNPVVEGQNLRIPIPPLTEERRRDLQKIAGKYAEQQK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RRD  D LKK+ K G  +ED    +E ++QK+TD  IK ID   + K++EIM  
Sbjct: 129 IAVRNVRRDANDDLKKAEKDGAIAEDERKKMETEVQKLTDEAIKRIDEALKTKEQEIMQV 188


>gi|92117244|ref|YP_576973.1| ribosome recycling factor [Nitrobacter hamburgensis X14]
 gi|91800138|gb|ABE62513.1| ribosome recycling factor [Nitrobacter hamburgensis X14]
          Length = 194

 Score =  196 bits (499), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 98/180 (54%), Positives = 127/180 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+  +K RM   I  LK ++  LRTGR + SML+ V+VEAYGSH+PLNQVA ++V E R
Sbjct: 13  FDINELKRRMQGAIQSLKHELGGLRTGRAAASMLEPVQVEAYGSHMPLNQVATISVPESR 72

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  EERR  LVKVAH YAE 
Sbjct: 73  LLSVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEA 132

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDG+D +KK  K+ + SED    L ND+QK TD  I  ID     K+KEI+
Sbjct: 133 AKVAVRHVRRDGLDTIKKLEKNHEISEDDEKRLANDVQKATDGVISEIDELLAGKEKEIL 192


>gi|319407371|emb|CBI81022.1| Ribosome recycling factor [Bartonella sp. 1-1C]
          Length = 186

 Score =  196 bits (498), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/185 (53%), Positives = 130/185 (70%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+  + + ++K RM   IS  K ++ +LRTGR S S+L+ + VEAYGS VP+NQVANV+V
Sbjct: 1   MDITLIMDDLKRRMEGAISSFKHELGSLRTGRASASLLEHLTVEAYGSVVPINQVANVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+A+ 
Sbjct: 61  PESRMLSVSVWDKTMVGAVERAIRDSGLGLNPITDGVNLRIPLPELNEERRKELVKIAYQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E+++I+ R++RRDGMD+LKK  K GK  +D   SL   +QK+TD+TI  ID     K+
Sbjct: 121 YTEQARIAARHVRRDGMDNLKKLEKEGKIGQDEARSLSEKVQKLTDTTIAEIDKILVLKE 180

Query: 181 KEIMH 185
            EIM 
Sbjct: 181 TEIMQ 185


>gi|146341066|ref|YP_001206114.1| ribosome recycling factor [Bradyrhizobium sp. ORS278]
 gi|190360236|sp|A4YVG3|RRF_BRASO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146193872|emb|CAL77889.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Bradyrhizobium sp. ORS278]
          Length = 187

 Score =  196 bits (498), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 128/180 (71%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL  +K RM      LK ++  LRTGR S SM++ V+VEAYGSH+PLNQ+A V+V EPR
Sbjct: 6   FDLNELKRRMQGATQALKHELGGLRTGRASASMVEPVQVEAYGSHMPLNQLATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWD+ MV +VE+ I +SNLGL+P  EGQV+R+ +PE  +ERR  LVKVAH YAE+
Sbjct: 66  LLSVQVWDRSMVKAVEKAIVDSNLGLSPATEGQVIRLRIPELNQERRKELVKVAHKYAEQ 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K+ + SED    L  D+QK TDS I  ID     K+KEI+
Sbjct: 126 ARVAVRHVRRDGLDTLKKLEKNHEMSEDDQERLAGDVQKATDSVISEIDQLLAAKEKEIL 185


>gi|163851510|ref|YP_001639553.1| ribosome recycling factor [Methylobacterium extorquens PA1]
 gi|218530317|ref|YP_002421133.1| ribosome recycling factor [Methylobacterium chloromethanicum CM4]
 gi|240138677|ref|YP_002963149.1| Ribosome recycling factor (Ribosome releasing factor) (RRF)
           [Methylobacterium extorquens AM1]
 gi|254561273|ref|YP_003068368.1| Ribosome recycling factor [Methylobacterium extorquens DM4]
 gi|238687348|sp|A9W4H6|RRF_METEP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809519|sp|B7KZH3|RRF_METC4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|163663115|gb|ABY30482.1| ribosome recycling factor [Methylobacterium extorquens PA1]
 gi|218522620|gb|ACK83205.1| ribosome recycling factor [Methylobacterium chloromethanicum CM4]
 gi|240008646|gb|ACS39872.1| Ribosome recycling factor (Ribosome releasing factor) (RRF)
           [Methylobacterium extorquens AM1]
 gi|254268551|emb|CAX24508.1| Ribosome recycling factor (Ribosome releasing factor) (RRF)
           [Methylobacterium extorquens DM4]
          Length = 187

 Score =  196 bits (498), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/182 (51%), Positives = 128/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL +IK RM   +S L KD+ +LRTGR +PS+LD ++VEAYGS +P+ QVA V+V EPR
Sbjct: 6   FDLGDIKRRMQGAVSSLSKDLGSLRTGRATPSLLDPIQVEAYGSSMPMAQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L +SVWD+ MV +VE+ I ES+LGLNP+ EGQ +R+ +PE  E+RR  +VKVAH Y E+
Sbjct: 66  LLSISVWDRSMVTNVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYTEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K G  S+D       ++QK TD  I  ID     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDILKKLEKDGAISQDDEKRQAAEVQKATDDAINEIDGVLASKEKEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|16126163|ref|NP_420727.1| ribosome recycling factor [Caulobacter crescentus CB15]
 gi|221234934|ref|YP_002517370.1| ribosome recycling factor [Caulobacter crescentus NA1000]
 gi|22001950|sp|Q9A706|RRF_CAUCR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809500|sp|B8GWS0|RRF_CAUCN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|13423373|gb|AAK23895.1| ribosome recycling factor [Caulobacter crescentus CB15]
 gi|220964106|gb|ACL95462.1| ribosome Recycling factor (RRF) [Caulobacter crescentus NA1000]
          Length = 188

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/180 (54%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +DRM   +S LK++  +LRTGR S S+LD V VEAYGS  PLN VA+V+V EPR +
Sbjct: 9   LSRYRDRMDKAVSALKEEFGSLRTGRASASLLDQVMVEAYGSTTPLNAVASVSVPEPRQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            VSVWD+ +V SVE+ I  S LGLNP+VEGQ LRIP+P  TEERR  L K+A  YAE+ K
Sbjct: 69  NVSVWDRGVVVSVEKAIRASGLGLNPVVEGQNLRIPIPPLTEERRRDLQKIAGKYAEQQK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RRD  D LKK+ K G  +ED    +E ++QK+TD  IK ID   + K+ EIM  
Sbjct: 129 IAVRNVRRDANDDLKKAEKDGAIAEDERKKMETEVQKMTDDAIKRIDEALKTKEHEIMQV 188


>gi|90423939|ref|YP_532309.1| ribosome recycling factor [Rhodopseudomonas palustris BisB18]
 gi|122476317|sp|Q215E6|RRF_RHOPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|90105953|gb|ABD87990.1| ribosome recycling factor [Rhodopseudomonas palustris BisB18]
          Length = 187

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/180 (52%), Positives = 129/180 (71%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+  +K RM      LK ++  LRTGR + SML+ V+VEAYGSH+PLNQ+A V+V EPR
Sbjct: 6   FDINELKRRMQGATQSLKHELGGLRTGRAAASMLEPVQVEAYGSHMPLNQLATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWD+ MV +VE+ I +SNLGL+P  EGQVLR+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDRSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K+ + SED    L +++QK TD+TI  +D     K+KEI+
Sbjct: 126 TRVAVRHVRRDGLDTLKKLEKNSEISEDDQERLAHEVQKATDATILEVDQLLAAKEKEIL 185


>gi|23502037|ref|NP_698164.1| ribosome recycling factor [Brucella suis 1330]
 gi|62290072|ref|YP_221865.1| ribosome recycling factor [Brucella abortus bv. 1 str. 9-941]
 gi|82699998|ref|YP_414572.1| ribosome recycling factor [Brucella melitensis biovar Abortus 2308]
 gi|148560306|ref|YP_001259077.1| ribosome recycling factor [Brucella ovis ATCC 25840]
 gi|161619110|ref|YP_001592997.1| ribosome recycling factor [Brucella canis ATCC 23365]
 gi|163843423|ref|YP_001627827.1| ribosome recycling factor [Brucella suis ATCC 23445]
 gi|189024311|ref|YP_001935079.1| ribosome recycling factor [Brucella abortus S19]
 gi|237815578|ref|ZP_04594575.1| ribosome recycling factor [Brucella abortus str. 2308 A]
 gi|254689382|ref|ZP_05152636.1| ribosome recycling factor [Brucella abortus bv. 6 str. 870]
 gi|254693866|ref|ZP_05155694.1| ribosome recycling factor [Brucella abortus bv. 3 str. Tulya]
 gi|254697517|ref|ZP_05159345.1| ribosome recycling factor [Brucella abortus bv. 2 str. 86/8/59]
 gi|254701900|ref|ZP_05163728.1| ribosome recycling factor [Brucella suis bv. 5 str. 513]
 gi|254704445|ref|ZP_05166273.1| ribosome recycling factor [Brucella suis bv. 3 str. 686]
 gi|254706659|ref|ZP_05168487.1| ribosome recycling factor [Brucella pinnipedialis M163/99/10]
 gi|254710233|ref|ZP_05172044.1| ribosome recycling factor [Brucella pinnipedialis B2/94]
 gi|254714229|ref|ZP_05176040.1| ribosome recycling factor [Brucella ceti M644/93/1]
 gi|254717665|ref|ZP_05179476.1| ribosome recycling factor [Brucella ceti M13/05/1]
 gi|254719221|ref|ZP_05181032.1| ribosome recycling factor [Brucella sp. 83/13]
 gi|254730412|ref|ZP_05188990.1| ribosome recycling factor [Brucella abortus bv. 4 str. 292]
 gi|256031727|ref|ZP_05445341.1| ribosome recycling factor [Brucella pinnipedialis M292/94/1]
 gi|256061240|ref|ZP_05451391.1| ribosome recycling factor [Brucella neotomae 5K33]
 gi|256159893|ref|ZP_05457615.1| ribosome recycling factor [Brucella ceti M490/95/1]
 gi|256255127|ref|ZP_05460663.1| ribosome recycling factor [Brucella ceti B1/94]
 gi|256257628|ref|ZP_05463164.1| ribosome recycling factor [Brucella abortus bv. 9 str. C68]
 gi|256369584|ref|YP_003107094.1| ribosome releasing factor [Brucella microti CCM 4915]
 gi|260546622|ref|ZP_05822361.1| ribosome recycling factor [Brucella abortus NCTC 8038]
 gi|260566308|ref|ZP_05836778.1| ribosome recycling factor [Brucella suis bv. 4 str. 40]
 gi|260754900|ref|ZP_05867248.1| ribosome recycling factor [Brucella abortus bv. 6 str. 870]
 gi|260758117|ref|ZP_05870465.1| ribosome recycling factor [Brucella abortus bv. 4 str. 292]
 gi|260761943|ref|ZP_05874286.1| ribosome recycling factor [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883912|ref|ZP_05895526.1| ribosome recycling factor [Brucella abortus bv. 9 str. C68]
 gi|261214152|ref|ZP_05928433.1| ribosome recycling factor [Brucella abortus bv. 3 str. Tulya]
 gi|261219506|ref|ZP_05933787.1| ribosome recycling factor [Brucella ceti M13/05/1]
 gi|261222325|ref|ZP_05936606.1| ribosome recycling factor [Brucella ceti B1/94]
 gi|261314119|ref|ZP_05953316.1| ribosome recycling factor [Brucella pinnipedialis M163/99/10]
 gi|261317792|ref|ZP_05956989.1| ribosome recycling factor [Brucella pinnipedialis B2/94]
 gi|261322001|ref|ZP_05961198.1| ribosome recycling factor [Brucella ceti M644/93/1]
 gi|261325248|ref|ZP_05964445.1| ribosome recycling factor [Brucella neotomae 5K33]
 gi|261752464|ref|ZP_05996173.1| ribosome recycling factor [Brucella suis bv. 5 str. 513]
 gi|261755123|ref|ZP_05998832.1| ribosome recycling factor [Brucella suis bv. 3 str. 686]
 gi|265984216|ref|ZP_06096951.1| ribosome recycling factor [Brucella sp. 83/13]
 gi|265988823|ref|ZP_06101380.1| ribosome recycling factor [Brucella pinnipedialis M292/94/1]
 gi|265998289|ref|ZP_06110846.1| ribosome recycling factor [Brucella ceti M490/95/1]
 gi|294852498|ref|ZP_06793171.1| ribosome recycling factor [Brucella sp. NVSL 07-0026]
 gi|297248470|ref|ZP_06932188.1| ribosome recycling factor [Brucella abortus bv. 5 str. B3196]
 gi|306837970|ref|ZP_07470828.1| ribosome recycling factor [Brucella sp. NF 2653]
 gi|306841882|ref|ZP_07474562.1| ribosome recycling factor [Brucella sp. BO2]
 gi|34924970|sp|Q8G0D8|RRF_BRUSU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|75496735|sp|Q57CY0|RRF_BRUAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123547502|sp|Q2YRP7|RRF_BRUA2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230414|sp|A5VQT0|RRF_BRUO2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044046|sp|A9M5H1|RRF_BRUC2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044047|sp|B0CGV6|RRF_BRUSI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689377|sp|B2S608|RRF_BRUA1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|23347991|gb|AAN30079.1| ribosome recycling factor [Brucella suis 1330]
 gi|62196204|gb|AAX74504.1| Frr, ribosome recycling factor [Brucella abortus bv. 1 str. 9-941]
 gi|82616099|emb|CAJ11137.1| Ribosome recycling factor [Brucella melitensis biovar Abortus 2308]
 gi|148371563|gb|ABQ61542.1| ribosome recycling factor [Brucella ovis ATCC 25840]
 gi|161335921|gb|ABX62226.1| ribosome recycling factor [Brucella canis ATCC 23365]
 gi|163674146|gb|ABY38257.1| ribosome recycling factor [Brucella suis ATCC 23445]
 gi|189019883|gb|ACD72605.1| Ribosome recycling factor [Brucella abortus S19]
 gi|237788876|gb|EEP63087.1| ribosome recycling factor [Brucella abortus str. 2308 A]
 gi|255999746|gb|ACU48145.1| ribosome releasing factor [Brucella microti CCM 4915]
 gi|260095672|gb|EEW79549.1| ribosome recycling factor [Brucella abortus NCTC 8038]
 gi|260155826|gb|EEW90906.1| ribosome recycling factor [Brucella suis bv. 4 str. 40]
 gi|260668435|gb|EEX55375.1| ribosome recycling factor [Brucella abortus bv. 4 str. 292]
 gi|260672375|gb|EEX59196.1| ribosome recycling factor [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675008|gb|EEX61829.1| ribosome recycling factor [Brucella abortus bv. 6 str. 870]
 gi|260873440|gb|EEX80509.1| ribosome recycling factor [Brucella abortus bv. 9 str. C68]
 gi|260915759|gb|EEX82620.1| ribosome recycling factor [Brucella abortus bv. 3 str. Tulya]
 gi|260920909|gb|EEX87562.1| ribosome recycling factor [Brucella ceti B1/94]
 gi|260924595|gb|EEX91163.1| ribosome recycling factor [Brucella ceti M13/05/1]
 gi|261294691|gb|EEX98187.1| ribosome recycling factor [Brucella ceti M644/93/1]
 gi|261297015|gb|EEY00512.1| ribosome recycling factor [Brucella pinnipedialis B2/94]
 gi|261301228|gb|EEY04725.1| ribosome recycling factor [Brucella neotomae 5K33]
 gi|261303145|gb|EEY06642.1| ribosome recycling factor [Brucella pinnipedialis M163/99/10]
 gi|261742217|gb|EEY30143.1| ribosome recycling factor [Brucella suis bv. 5 str. 513]
 gi|261744876|gb|EEY32802.1| ribosome recycling factor [Brucella suis bv. 3 str. 686]
 gi|262552757|gb|EEZ08747.1| ribosome recycling factor [Brucella ceti M490/95/1]
 gi|264661020|gb|EEZ31281.1| ribosome recycling factor [Brucella pinnipedialis M292/94/1]
 gi|264662808|gb|EEZ33069.1| ribosome recycling factor [Brucella sp. 83/13]
 gi|294821087|gb|EFG38086.1| ribosome recycling factor [Brucella sp. NVSL 07-0026]
 gi|297175639|gb|EFH34986.1| ribosome recycling factor [Brucella abortus bv. 5 str. B3196]
 gi|306288012|gb|EFM59414.1| ribosome recycling factor [Brucella sp. BO2]
 gi|306406894|gb|EFM63115.1| ribosome recycling factor [Brucella sp. NF 2653]
          Length = 186

 Score =  194 bits (494), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 95/186 (51%), Positives = 126/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   ++ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN++V
Sbjct: 1   MSDAFDINDLKRRMEGAVNALKHDLGGLRTGRASASLLEPITIEAYGSTMPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGMTLRIPLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDQLKKLEKDSVISQDESRVLSEKVQKLTDDTIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|319404368|emb|CBI77971.1| Ribosome recycling factor [Bartonella rochalimae ATCC BAA-1498]
          Length = 186

 Score =  194 bits (494), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 98/185 (52%), Positives = 129/185 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+  + + ++K RM   IS  K ++ +LRTGR S S+L+ + VEAYGS VP+NQVAN++V
Sbjct: 1   MDITLIMDDLKRRMEGAISSFKHELGSLRTGRASASLLEHLTVEAYGSIVPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+A+ 
Sbjct: 61  PESRMLSVSVWDKTMVGAVERAIRDSGLGLNPITDGVNLRIPLPELNEERRKELVKIAYQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E+++I+ R++RRDGMD+LKK  K GK  +D   SL   +QK+TD TI  ID     K+
Sbjct: 121 YTEQARIAARHVRRDGMDNLKKLEKEGKIGQDEARSLSEKVQKLTDETIAEIDKILVLKE 180

Query: 181 KEIMH 185
            EIM 
Sbjct: 181 TEIMQ 185


>gi|170738972|ref|YP_001767627.1| ribosome recycling factor [Methylobacterium sp. 4-46]
 gi|190360253|sp|B0UPZ4|RRF_METS4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|168193246|gb|ACA15193.1| ribosome recycling factor [Methylobacterium sp. 4-46]
          Length = 187

 Score =  194 bits (494), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 90/182 (49%), Positives = 131/182 (71%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL +IK RM   ++ LK D+ +LRTGR SP++LD ++VEAYG+ +P+ QVA ++V EPR
Sbjct: 6   FDLADIKRRMQGAVNSLKHDLGSLRTGRASPTLLDPIQVEAYGAAMPMAQVATISVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V+VWD+ MV++VE+ I ES+LGLNP+ EGQ +R+ +PE  E+RR  +VKVAH YAE+
Sbjct: 66  LLSVAVWDRGMVSAVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYAEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K G  S+D      + +QK+TD  I  +D     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDLLKKLEKDGAISQDDEKRQADQVQKVTDQHIAEVDQTLAAKEKEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|239832046|ref|ZP_04680375.1| ribosome recycling factor [Ochrobactrum intermedium LMG 3301]
 gi|239824313|gb|EEQ95881.1| ribosome recycling factor [Ochrobactrum intermedium LMG 3301]
          Length = 186

 Score =  194 bits (494), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 97/186 (52%), Positives = 126/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   I+ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN+TV
Sbjct: 1   MSDAFDINDLKRRMEGAINSLKHDLGGLRTGRASASLLEPIVIEAYGSTMPINQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGTTLRIPLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDTLKKLEKDSLISQDDSRVLSEKVQKLTDETIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|163795639|ref|ZP_02189605.1| Ribosome recycling factor [alpha proteobacterium BAL199]
 gi|159179238|gb|EDP63771.1| Ribosome recycling factor [alpha proteobacterium BAL199]
          Length = 185

 Score =  194 bits (494), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 92/181 (50%), Positives = 129/181 (71%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +DL +I+ RM   +  L+ +   LRTGR S S+L+ + VEAYGS +PLNQVA ++V EPR
Sbjct: 4   LDLDDIERRMDGAVVALRAEFSGLRTGRASASLLEPIHVEAYGSRMPLNQVATISVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V VWD+ M  +VE+ I ES+LGLNP  +GQ++R+P+P+ +EERR  LVKVA  YAE 
Sbjct: 64  MISVQVWDRAMSKAVEKAIRESDLGLNPQSDGQLIRVPLPDLSEERRTELVKVASKYAES 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMDHLKK+ K G  S+D     E++IQ+ TD  +K ID     K+K+IM
Sbjct: 124 ARVAVRNVRRDGMDHLKKAEKDGDVSQDERRLYEDEIQEQTDKHVKAIDEALASKEKDIM 183

Query: 185 H 185
            
Sbjct: 184 Q 184


>gi|254420584|ref|ZP_05034308.1| ribosome recycling factor [Brevundimonas sp. BAL3]
 gi|196186761|gb|EDX81737.1| ribosome recycling factor [Brevundimonas sp. BAL3]
          Length = 185

 Score =  194 bits (493), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 96/181 (53%), Positives = 128/181 (70%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +++  +DRM   +  LK++   LRTGR +  +L+ V+VEAYGS  PL+ VA ++V EPRM
Sbjct: 5   EVKTYRDRMEKAVVALKEEFSGLRTGRANAGLLEPVRVEAYGSASPLSAVAAISVPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V+VWDK MV +VE+ I  +NLGLNPIV+GQ LRIPVP  TEERR  LVK+A  Y E+ 
Sbjct: 65  ISVNVWDKGMVVAVEKAIRNANLGLNPIVDGQTLRIPVPPLTEERRKDLVKLAGKYTEQQ 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           KI+VRN+RRD  D LKK+ K+G+ S+D    LE DIQK TD+ IK ID   + K++EIM 
Sbjct: 125 KIAVRNVRRDANDDLKKAEKAGEISQDEQKKLEADIQKETDAAIKRIDEALKTKEQEIMQ 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|225627627|ref|ZP_03785664.1| ribosome recycling factor [Brucella ceti str. Cudo]
 gi|260168860|ref|ZP_05755671.1| ribosome recycling factor [Brucella sp. F5/99]
 gi|261758348|ref|ZP_06002057.1| ribosome recycling factor [Brucella sp. F5/99]
 gi|225617632|gb|EEH14677.1| ribosome recycling factor [Brucella ceti str. Cudo]
 gi|261738332|gb|EEY26328.1| ribosome recycling factor [Brucella sp. F5/99]
          Length = 186

 Score =  194 bits (493), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 95/186 (51%), Positives = 126/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   ++ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN++V
Sbjct: 1   MSDAFDINDLKRRMEGAVNALKHDLGGLRTGRASASLLEPITIEAYGSTMPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGMTLRIPLPELNEQRRKELVKIAHR 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDQLKKLEKDSVISQDESRVLSEKVQKLTDDTIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|306844023|ref|ZP_07476618.1| ribosome recycling factor [Brucella sp. BO1]
 gi|306275778|gb|EFM57502.1| ribosome recycling factor [Brucella sp. BO1]
          Length = 186

 Score =  194 bits (493), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 94/186 (50%), Positives = 126/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   ++ LK D+  LRTGR S S+L+ + +EAYGS +P+NQ+AN++V
Sbjct: 1   MSDAFDINDLKRRMEGAVNALKHDLGGLRTGRASASLLEPITIEAYGSTMPINQIANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGMTLRIPLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDQLKKLEKDSVISQDESRVLSEKVQKLTDDTIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|158423320|ref|YP_001524612.1| ribosome recycling factor [Azorhizobium caulinodans ORS 571]
 gi|172047942|sp|A8I468|RRF_AZOC5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|158330209|dbj|BAF87694.1| ribosome recycling factor [Azorhizobium caulinodans ORS 571]
          Length = 186

 Score =  194 bits (493), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 95/184 (51%), Positives = 127/184 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M    D+ +IK RM   ++ LK+++  LRTGR S S+L+ + V+AYG+++PL QVA V+V
Sbjct: 1   MTTAFDIADIKRRMAGAVTSLKQELGGLRTGRASASLLEPITVDAYGANMPLAQVATVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L V VWD+ MV +VE+ I +SNLGLNP  EGQ LRI +PE  EERR  LVKVAH 
Sbjct: 61  PEPRLLSVQVWDRGMVNAVEKAIRDSNLGLNPNTEGQTLRIRIPELNEERRKELVKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++VR++RRDGMD LKK  K    S D +  L  D+QK TD TI  +D     K+
Sbjct: 121 YAEAARVAVRHVRRDGMDLLKKLEKDSAISSDDMERLSKDVQKATDETISEVDQTLAHKE 180

Query: 181 KEIM 184
           KEI+
Sbjct: 181 KEIL 184


>gi|148255867|ref|YP_001240452.1| ribosome recycling factor [Bradyrhizobium sp. BTAi1]
 gi|190360235|sp|A5EK52|RRF_BRASB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146408040|gb|ABQ36546.1| ribosome recycling factor [Bradyrhizobium sp. BTAi1]
          Length = 187

 Score =  194 bits (493), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 127/180 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL  +K RM      LK ++  LRTGR S SM++ V+VEAYGSH+PLNQ+A V+V EPR
Sbjct: 6   FDLNELKRRMQGATQALKHELGGLRTGRASASMVEPVQVEAYGSHMPLNQLATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWD+ MV +VE+ I +SNLGL+P  EGQV+R+ +PE  +ERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDRTMVKAVEKAIVDSNLGLSPATEGQVIRLRIPELNQERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D +KK  K+ + SED    L  DIQK TDS I  ID     K+KEI+
Sbjct: 126 ARVAVRHVRRDGLDTVKKLEKNHEISEDDQERLATDIQKATDSVISEIDQLLAAKEKEIL 185


>gi|220921531|ref|YP_002496832.1| ribosome recycling factor [Methylobacterium nodulans ORS 2060]
 gi|254809520|sp|B8INK3|RRF_METNO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219946137|gb|ACL56529.1| ribosome recycling factor [Methylobacterium nodulans ORS 2060]
          Length = 187

 Score =  194 bits (492), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 89/182 (48%), Positives = 132/182 (72%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL ++K RM   ++ LK D+ +LRTGR SP++LD +++EAYG+ +P+ QVA ++V EPR
Sbjct: 6   FDLADLKRRMQGAVNALKHDLGSLRTGRASPTLLDPIQIEAYGAVMPMAQVATISVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V+VWD+ MV++VE+ I ES+LGLNP+ EGQ +R+ +PE +E+RR  +VKVAH YAE+
Sbjct: 66  LLSVAVWDRGMVSAVEKAIRESDLGLNPMTEGQTIRLRIPEMSEQRRKEMVKVAHKYAEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K G  S+D      + +QKITD  I  +D     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDLLKKLEKDGAISQDDEKRQADQVQKITDQHIAEVDQTLAAKEKEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|319405841|emb|CBI79473.1| Ribosome recycling factor [Bartonella sp. AR 15-3]
          Length = 186

 Score =  194 bits (492), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 96/186 (51%), Positives = 129/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+  + + ++K RM   IS  K ++ +LRTGR S S+L+ + VEAYGS VP+NQVAN++V
Sbjct: 1   MDITLIMDDLKRRMEGAISSFKHELGSLRTGRASASLLEHLTVEAYGSVVPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK M+ +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+A+ 
Sbjct: 61  PESRMLSVSVWDKTMIGAVERAIRDSGLGLNPITDGMNLRIPLPELNEERRKELVKIAYQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E+++I+ R++RRDGMD+LKK  K G+  +D   SL   +QK+TD TI  ID     K+
Sbjct: 121 YTEQARIAARHVRRDGMDNLKKLEKEGEIGQDEARSLSEKVQKLTDETIAEIDKILLLKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 TEIMQI 186


>gi|153009362|ref|YP_001370577.1| ribosome recycling factor [Ochrobactrum anthropi ATCC 49188]
 gi|166230810|sp|A6X0J4|RRF_OCHA4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151561250|gb|ABS14748.1| ribosome recycling factor [Ochrobactrum anthropi ATCC 49188]
          Length = 186

 Score =  194 bits (492), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 97/186 (52%), Positives = 126/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   I+ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN+TV
Sbjct: 1   MSDAFDINDLKRRMEGAINSLKHDLNGLRTGRASASLLEPIVIEAYGSTMPINQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGTTLRIPLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDTLKKLEKDSLISQDDGRVLSEKVQKLTDETIAEMDKVVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|307293418|ref|ZP_07573264.1| ribosome recycling factor [Sphingobium chlorophenolicum L-1]
 gi|306881484|gb|EFN12700.1| ribosome recycling factor [Sphingobium chlorophenolicum L-1]
          Length = 185

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/179 (51%), Positives = 124/179 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  +++ RM   +  LK D+  LRTGR +  +LD V VE YG+H+PLNQVA V+  EPRM
Sbjct: 5   DKADLERRMHGAVESLKGDLAGLRTGRANIQLLDPVTVEVYGAHMPLNQVATVSAPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWDK  V   ++ I  + LGLNPIV+GQ LR+P+P+ TEERR  L K+A  YAE +
Sbjct: 65  LSVQVWDKTNVGPCDKAIRSAGLGLNPIVDGQTLRLPIPDLTEERRKELAKLASKYAEGA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +I+VRN+RRDGMD LK   K G+ SED    LE ++Q++TDSTI +ID+    K+KEI+
Sbjct: 125 RIAVRNVRRDGMDSLKVDEKKGEISEDERKRLETEVQRLTDSTIADIDAVTAAKEKEIL 183


>gi|86749942|ref|YP_486438.1| ribosome recycling factor [Rhodopseudomonas palustris HaA2]
 gi|123292529|sp|Q2IW83|RRF_RHOP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|86572970|gb|ABD07527.1| ribosome recycling factor [Rhodopseudomonas palustris HaA2]
          Length = 187

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/180 (51%), Positives = 129/180 (71%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+ ++K RM      L+ ++  LRTGR + SML+ V+V+AYG+H+PLNQ+A VTV EPR
Sbjct: 6   FDINDLKRRMQGASQALQHELGGLRTGRAAASMLEPVQVDAYGTHMPLNQLATVTVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  ++RR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMVRAVEKAIVDSNLGLSPATEGQVLRLRIPELNQDRRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D +KK  KS + SED    L+ ++QK TDS I  ID     K+KEI+
Sbjct: 126 ARVAVRHVRRDGLDTIKKLEKSHEISEDDQKRLDQEVQKATDSAISEIDQLLASKEKEIL 185


>gi|114569933|ref|YP_756613.1| ribosome recycling factor [Maricaulis maris MCS10]
 gi|122316100|sp|Q0APW2|RRF_MARMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114340395|gb|ABI65675.1| ribosome recycling factor [Maricaulis maris MCS10]
          Length = 186

 Score =  192 bits (489), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 89/185 (48%), Positives = 127/185 (68%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D  ++K RM   I  L+K+   LRTGR S  +L+ +KV+AYG+  P+NQ+ N++V
Sbjct: 1   MSDEYDENDLKRRMDGAIESLRKEFAGLRTGRASAGLLEPIKVDAYGTPTPINQLGNISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+ + VWDK MVA+V++ I  S +GLNP++EGQ+LRIP+P   EERR  + K+A  
Sbjct: 61  PEPRMITLQVWDKNMVAAVDKAIRNSGIGLNPVMEGQLLRIPIPPLNEERRAEIAKLAGN 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++VRN+RRDGMD LKK  K G  SED   +   D+QK+T+  IK ID   + K+
Sbjct: 121 YAEHARVAVRNVRRDGMDALKKMEKDGDLSEDEQKAFSEDVQKLTNEAIKRIDENLKSKQ 180

Query: 181 KEIMH 185
           +EIM 
Sbjct: 181 EEIMQ 185


>gi|197105240|ref|YP_002130617.1| ribosome recycling factor protein [Phenylobacterium zucineum HLK1]
 gi|238690149|sp|B4RBZ1|RRF_PHEZH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|196478660|gb|ACG78188.1| ribosome recycling factor protein [Phenylobacterium zucineum HLK1]
          Length = 188

 Score =  192 bits (489), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 128/180 (71%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +DRM   ++ LK++  +LRTGR S S+LD + V+AYGS +PL QVA V+V EPRM+
Sbjct: 9   LSKYRDRMDKAVAALKEEFGSLRTGRASASLLDQIHVDAYGSSMPLTQVAAVSVPEPRMI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+VWD+ MV SVE+ I +S+LGLNP+V+GQ LRIP+P  TEERR  L K+A  YAE+ +
Sbjct: 69  TVNVWDRGMVVSVEKAIRQSDLGLNPVVDGQTLRIPIPPLTEERRKDLAKIAGRYAEQQR 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + L+K++K    S+D    +E ++QK+TD  IK ID   + K++EIM  
Sbjct: 129 VAVRNIRRDANEDLRKAQKDNVISQDEEKRMETEVQKMTDEAIKRIDEALKTKEQEIMQV 188


>gi|254294076|ref|YP_003060099.1| ribosome recycling factor [Hirschia baltica ATCC 49814]
 gi|254042607|gb|ACT59402.1| ribosome recycling factor [Hirschia baltica ATCC 49814]
          Length = 184

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 89/182 (48%), Positives = 132/182 (72%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID+++++ RM   ++ LK +   LRTGR S ++LD V V+AYG+  PL QVA+++V EPR
Sbjct: 3   IDMKDLERRMEGAVASLKTEFSGLRTGRASVNLLDTVMVQAYGASTPLAQVASISVPEPR 62

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V+VWDK +V + ++ I E+ LGLNP+++GQ LRIP+P   EERR  L K+A  YAE 
Sbjct: 63  MLAVNVWDKTVVGAADKAIREAGLGLNPVMDGQNLRIPIPPLNEERRAELAKLAGKYAES 122

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD LKK  K G+ S+D   SLE+D+QK+TD  I ++D+  + K++EIM
Sbjct: 123 ARVAIRNVRRDGMDILKKMEKDGEISKDEQKSLEDDVQKLTDKIISSVDASVKSKEEEIM 182

Query: 185 HF 186
             
Sbjct: 183 QV 184


>gi|294084085|ref|YP_003550843.1| ribosome recycling factor [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663658|gb|ADE38759.1| ribosome recycling factor [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 185

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 88/181 (48%), Positives = 128/181 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D++++K RM    + LK + M LR GR S  ML+ + V+AYGS +P++QV N++  EPR
Sbjct: 4   FDIEDMKRRMEGGFASLKTEFMGLRAGRASTGMLEPIMVDAYGSKMPMSQVGNISAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V+VWD  M ASVE+ I ES+LGLNP+ EG ++R+P+P+ +EERR  +VKVA  YAE 
Sbjct: 64  LLTVTVWDASMTASVEKAIRESDLGLNPMAEGTLIRVPIPDLSEERRKDMVKVAGRYAEA 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDG++ ++K+ K G  SED    LE+DIQK TD  +K ID  F  K+KEI 
Sbjct: 124 ARVAIRNVRRDGIESVRKAEKEGLMSEDERHGLESDIQKTTDEYVKKIDDAFANKEKEIT 183

Query: 185 H 185
            
Sbjct: 184 Q 184


>gi|85373585|ref|YP_457647.1| ribosome recycling factor [Erythrobacter litoralis HTCC2594]
 gi|122544868|sp|Q2NBU1|RRF_ERYLH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|84786668|gb|ABC62850.1| ribosome recycling factor [Erythrobacter litoralis HTCC2594]
          Length = 185

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/179 (51%), Positives = 126/179 (70%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  +I+ RM   +  LK D+  LRTGR + S+LD V VE YG+ +PLNQVA V   EPRM
Sbjct: 5   DKADIERRMAGAVESLKSDLSGLRTGRANTSLLDPVVVEVYGAMMPLNQVATVNAPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWDK  V++VE+GI ++NLGLNP+ +GQ +R+P+P+ TEERR  L K+A  YAEK+
Sbjct: 65  LAVQVWDKANVSAVEKGITKANLGLNPMTDGQTVRLPMPDLTEERRKELAKLAGQYAEKA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KI++RN+RRDGM+ LK   K+   SED    +E+++QK+TD  +   DS  E K+KEIM
Sbjct: 125 KIAIRNVRRDGMEDLKADEKAKDISEDDRKRMEDEVQKLTDKYVAEADSAAEAKEKEIM 183


>gi|91977324|ref|YP_569983.1| ribosome recycling factor [Rhodopseudomonas palustris BisB5]
 gi|123721792|sp|Q136A7|RRF_RHOPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91683780|gb|ABE40082.1| ribosome recycling factor [Rhodopseudomonas palustris BisB5]
          Length = 187

 Score =  192 bits (488), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/180 (51%), Positives = 130/180 (72%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+  +K RM      L+ ++  LRTGR S SML+ V+V+AYG+H+PLNQVA V+V EPR
Sbjct: 6   FDINEVKRRMHGASQALQHELGGLRTGRASASMLEPVQVDAYGTHMPLNQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  ++RR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNQDRRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D +KK  K+ + SED    L++++QK TD+TI  ID     K+KEI+
Sbjct: 126 ARVAVRHVRRDGLDIIKKLEKAHEISEDDQKRLDHEVQKATDATISEIDQLLANKEKEIL 185


>gi|115524563|ref|YP_781474.1| ribosome recycling factor [Rhodopseudomonas palustris BisA53]
 gi|122296187|sp|Q07NJ0|RRF_RHOP5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|115518510|gb|ABJ06494.1| ribosome recycling factor [Rhodopseudomonas palustris BisA53]
          Length = 187

 Score =  192 bits (487), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 92/180 (51%), Positives = 130/180 (72%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+  +K RM      L+ ++  LRTGR S SML+ V+V+AYG+H+PL QVA ++V EPR
Sbjct: 6   FDISELKRRMQGATHALQHELGGLRTGRASSSMLEPVQVDAYGTHMPLIQVATISVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK M+ +VE+ I +SNLGL+P  EGQV+R+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMIKAVEKAIVDSNLGLSPSTEGQVIRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K+ + SED    L +D+QK+TD+TI+ +D     K+KEI+
Sbjct: 126 ARVAVRHVRRDGLDTLKKLEKNHEISEDDQERLAHDVQKVTDATIQEVDQLLAAKEKEIL 185


>gi|256113719|ref|ZP_05454523.1| ribosome recycling factor [Brucella melitensis bv. 3 str. Ether]
 gi|265995074|ref|ZP_06107631.1| ribosome recycling factor rrf [Brucella melitensis bv. 3 str.
           Ether]
 gi|262766187|gb|EEZ11976.1| ribosome recycling factor rrf [Brucella melitensis bv. 3 str.
           Ether]
          Length = 186

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 94/186 (50%), Positives = 125/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   ++ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN++V
Sbjct: 1   MSDAFDINDLKRRMEGAVNALKHDLGGLRTGRASASLLEPITIEAYGSTMPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRI +PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGMTLRICLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDQLKKLEKDSVISQDESRVLSEKVQKLTDDTIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|17987109|ref|NP_539743.1| ribosome recycling factor [Brucella melitensis bv. 1 str. 16M]
 gi|225852656|ref|YP_002732889.1| ribosome recycling factor [Brucella melitensis ATCC 23457]
 gi|256044814|ref|ZP_05447718.1| ribosome recycling factor [Brucella melitensis bv. 1 str. Rev.1]
 gi|256263850|ref|ZP_05466382.1| ribosome recycling factor rrf [Brucella melitensis bv. 2 str. 63/9]
 gi|260565586|ref|ZP_05836070.1| ribosome recycling factor [Brucella melitensis bv. 1 str. 16M]
 gi|265991238|ref|ZP_06103795.1| ribosome recycling factor rrf [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|3122781|sp|P94340|RRF_BRUME RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=CP24; AltName: Full=Ribosome-releasing factor
 gi|254809496|sp|C0RJC7|RRF_BRUMB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|1674445|gb|AAB19043.1| CP24 [Brucella melitensis]
 gi|17982770|gb|AAL52007.1| ribosome recycling factor (rrf) [Brucella melitensis bv. 1 str.
           16M]
 gi|225641021|gb|ACO00935.1| ribosome recycling factor [Brucella melitensis ATCC 23457]
 gi|260151654|gb|EEW86748.1| ribosome recycling factor [Brucella melitensis bv. 1 str. 16M]
 gi|263002022|gb|EEZ14597.1| ribosome recycling factor rrf [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263093981|gb|EEZ17915.1| ribosome recycling factor rrf [Brucella melitensis bv. 2 str. 63/9]
 gi|326409177|gb|ADZ66242.1| ribosome recycling factor [Brucella melitensis M28]
 gi|326538887|gb|ADZ87102.1| ribosome recycling factor [Brucella melitensis M5-90]
          Length = 186

 Score =  191 bits (484), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 94/186 (50%), Positives = 125/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   ++ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN++V
Sbjct: 1   MSDAFDINDLKRRMEGAVNALKHDLGGLRTGRASASLLEPITIEAYGSTMPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRI +PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGMTLRIRLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDQLKKLEKDSVISQDESRVLSEKVQKLTDDTIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|323137307|ref|ZP_08072385.1| ribosome recycling factor [Methylocystis sp. ATCC 49242]
 gi|322397294|gb|EFX99817.1| ribosome recycling factor [Methylocystis sp. ATCC 49242]
          Length = 186

 Score =  191 bits (484), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 96/185 (51%), Positives = 126/185 (68%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +  DL ++K RM   I+ LK +   LRTGR S S+L+ V V+AYG H PLNQVA ++V
Sbjct: 1   MTEKFDLADLKRRMQGAIATLKHEFGGLRTGRASASLLEPVHVDAYGQHSPLNQVATISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML V VWDK +V +V++ I E+NLGL P VEGQ+LRI +PE  E+RR  LVKVAH 
Sbjct: 61  PEPRMLSVQVWDKALVIAVDKAIREANLGLQPTVEGQMLRIRMPELNEQRRKELVKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++VR++RRDG+D LKK  K     ED     E ++QK TD  +K ID+    K+
Sbjct: 121 YAEDARVAVRHVRRDGLDILKKLLKDHAIPEDDEKRHETEVQKATDEAVKEIDAALAAKE 180

Query: 181 KEIMH 185
           KEIM 
Sbjct: 181 KEIMQ 185


>gi|299134998|ref|ZP_07028189.1| ribosome recycling factor [Afipia sp. 1NLS2]
 gi|298589975|gb|EFI50179.1| ribosome recycling factor [Afipia sp. 1NLS2]
          Length = 187

 Score =  191 bits (484), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 96/180 (53%), Positives = 126/180 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+ ++K RM      LK ++  LRTGR + SM++ V+VEAYGSH+PLNQVA V+V EPR
Sbjct: 6   FDINDLKRRMDGAKDSLKHELGGLRTGRAAISMVEPVQVEAYGSHMPLNQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE  I  SNLGLNP  EGQV+R+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMVKAVETAIVNSNLGLNPATEGQVIRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDG+D +KK  K  + SED       +IQK+TD+ I +ID     K+KEI+
Sbjct: 126 AKVAVRHVRRDGLDIVKKLEKDRQMSEDDQERASGEIQKVTDAAIADIDKLLATKEKEIL 185


>gi|296446143|ref|ZP_06888091.1| ribosome recycling factor [Methylosinus trichosporium OB3b]
 gi|296256337|gb|EFH03416.1| ribosome recycling factor [Methylosinus trichosporium OB3b]
          Length = 186

 Score =  190 bits (483), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 92/185 (49%), Positives = 129/185 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+Q  DL  +K RM   ++ LK ++  LRTGR S  +L+ + VEAYG   PLNQVA ++V
Sbjct: 1   MSQTFDLPELKRRMQGAMATLKHELGGLRTGRASAGLLEPIHVEAYGQSTPLNQVATISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L V VWDK +V++V++ I +SNLGL P +EGQVLRI  PE  E+RR  LVKVAH 
Sbjct: 61  PEPRLLSVQVWDKGLVSAVDKAIRDSNLGLMPTIEGQVLRIRTPELNEQRRKELVKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE++++SVR++RRDG+D LKK +K     ED     E ++QK TD  +++ID+   +K+
Sbjct: 121 YAEEARVSVRHVRRDGIDILKKLQKDHALPEDDAKRHETEVQKATDEAVRDIDAALAQKE 180

Query: 181 KEIMH 185
           KEI+ 
Sbjct: 181 KEILQ 185


>gi|329889359|ref|ZP_08267702.1| ribosome recycling factor [Brevundimonas diminuta ATCC 11568]
 gi|328844660|gb|EGF94224.1| ribosome recycling factor [Brevundimonas diminuta ATCC 11568]
          Length = 185

 Score =  190 bits (483), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 93/181 (51%), Positives = 124/181 (68%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL+  +DRM  +++ LK D   LRTGR +  +L+ V VEAYG+  PL  VA ++V EPRM
Sbjct: 5   DLKTFRDRMDKSVAALKDDYAGLRTGRANAGLLEPVVVEAYGATSPLTAVAAISVPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V+VWDK MV SVE+ I  + LGLNP+V+GQ LRIP+P  TEERR  L K+A  YAE  
Sbjct: 65  ISVNVWDKGMVVSVEKAIRSAGLGLNPVVDGQTLRIPIPPLTEERRKDLAKLAGKYAEDK 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           KI+VRN+RRD  D LKK+ K+G+ S+D    +E ++QK TD+ IK ID   + K+ EIM 
Sbjct: 125 KIAVRNVRRDANDELKKAEKAGEISQDEQKKMEAEVQKDTDAAIKRIDETLKAKEVEIMQ 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|126726888|ref|ZP_01742727.1| ribosome recycling factor [Rhodobacterales bacterium HTCC2150]
 gi|126703846|gb|EBA02940.1| ribosome recycling factor [Rhodobacterales bacterium HTCC2150]
          Length = 188

 Score =  189 bits (479), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 86/176 (48%), Positives = 122/176 (69%), Gaps = 1/176 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM   ++ LK +  TLRTGR + +MLD + VEAYG   P+NQV  V V EPRML ++V
Sbjct: 14  KRRMDGAMTSLKSEFQTLRTGRAAATMLDPISVEAYGQRTPINQVGTVNVPEPRMLTINV 73

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK MV +VE+ I ES LG+NP+V+G ++R+P+PE  EERR  L KVA  YAE +K++VR
Sbjct: 74  WDKTMVQAVEKAIRESGLGINPVVDGTIIRLPIPELNEERRRELTKVAAQYAESAKVAVR 133

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRDGMD +KK++ +G   +D      ++IQ++TD+ I  +D+    K++EIM  
Sbjct: 134 NVRRDGMDQIKKAKGNGMGEDDQ-KIWADEIQEVTDAAIAAVDASLAAKQEEIMQV 188


>gi|103487441|ref|YP_617002.1| ribosome recycling factor [Sphingopyxis alaskensis RB2256]
 gi|122984925|sp|Q1GRQ3|RRF_SPHAL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|98977518|gb|ABF53669.1| ribosome recycling factor [Sphingopyxis alaskensis RB2256]
          Length = 184

 Score =  188 bits (478), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 90/179 (50%), Positives = 127/179 (70%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  +++ RM   +  LK D+  LRTGR + ++LD V VE YGS +PLNQ+A+++V EPRM
Sbjct: 5   DKADLERRMHGAVESLKHDLAGLRTGRANAALLDPVTVEVYGSQMPLNQIASISVPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWDK  V  V++ I  + LGLNPIV+GQ+LR+P+PE T+ERR  L K+A  YAEK+
Sbjct: 65  LSVQVWDKANVGPVDKAIRSAGLGLNPIVDGQMLRLPIPEMTQERRKELSKLAGQYAEKA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++VRN+RRDGMD+LK+     + SED     E ++QK+TD+TI  ID+    K+KEI+
Sbjct: 125 RVAVRNVRRDGMDNLKQDENKKEISEDERKRHETEVQKLTDATIAEIDAAATAKEKEIL 183


>gi|296284729|ref|ZP_06862727.1| ribosome recycling factor [Citromicrobium bathyomarinum JL354]
          Length = 185

 Score =  187 bits (476), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 94/179 (52%), Positives = 124/179 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  +I+ RM   +  LK D+  LRTGR + S+LD V VE YGS +PLNQVA V+  EPRM
Sbjct: 5   DKSDIERRMQGAVESLKGDLAGLRTGRANTSLLDPVVVEVYGSMMPLNQVATVSAPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWDK  V++VE+GI  +NLGLNP+ +GQ LRIP+P+ TEERR  L KVA  Y E +
Sbjct: 65  LSVQVWDKGNVSAVEKGIAHANLGLNPMQDGQTLRIPMPDLTEERRKDLAKVADKYGESA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KI++RN+RRDGM+ LK+  K    SED     E+++QK+TD  + + D+  E KKKEI+
Sbjct: 125 KIAIRNVRRDGMEALKEDEKKKDISEDDRKRSEDEVQKLTDKYVADTDTAVEHKKKEIL 183


>gi|167646764|ref|YP_001684427.1| ribosome recycling factor [Caulobacter sp. K31]
 gi|189044048|sp|B0SZ18|RRF_CAUSK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167349194|gb|ABZ71929.1| ribosome recycling factor [Caulobacter sp. K31]
          Length = 188

 Score =  187 bits (476), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 93/180 (51%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KDRM   +  LK+D   LRTGR S  +LD + V AYGS V LN VA+++V EPR +
Sbjct: 9   LTRYKDRMDKAVLSLKEDFAGLRTGRASSGLLDQIMVNAYGSMVQLNTVASISVPEPRQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V++WDK +V++VE+ I  S+LGLNP+VEG  LRIP+P  TEERR  LVK+A  YAE  K
Sbjct: 69  NVNIWDKGVVSAVEKAIRNSDLGLNPVVEGNNLRIPIPPLTEERRKDLVKIAGKYAEAQK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK+ K+   SED +  +E ++QKITD  IK +D   + K++EIM  
Sbjct: 129 VAVRNIRRDANDDLKKAEKASVISEDELKKMETEVQKITDGAIKQVDEALKTKEQEIMQV 188


>gi|297717876|gb|ADI50081.1| ribosome recycling factor [Candidatus Odyssella thessalonicensis
           L13]
          Length = 185

 Score =  187 bits (476), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 91/174 (52%), Positives = 120/174 (68%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   I  L ++   LRTGR S ++LD +KV+AYGS  P+NQV N+ V E RML V VWD
Sbjct: 12  RMDGAIEVLNREFSGLRTGRASVNLLDAIKVDAYGSPTPINQVGNINVPEARMLTVQVWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             M+ +VE+ I ++ LGLNP V+GQ++RIP+P   EERR  L KVA  YAE++KISVRN+
Sbjct: 72  NSMIKAVEKAIRDAGLGLNPAVDGQLIRIPLPPLNEERRQELTKVAAKYAEEAKISVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD M+ LKKS K G+ SED    L +++QK+TD+ IK ID     K+K+IM  
Sbjct: 132 RRDIMESLKKSEKDGEISEDEHRRLSDEVQKVTDAHIKKIDEILASKQKDIMQV 185


>gi|209964517|ref|YP_002297432.1| ribosome recycling factor frr [Rhodospirillum centenum SW]
 gi|226749936|sp|B6ISU8|RRF_RHOCS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|209957983|gb|ACI98619.1| ribosome recycling factor frr [Rhodospirillum centenum SW]
          Length = 185

 Score =  187 bits (475), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 123/180 (68%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D+++ + RM   +  L+K+   LRTGR S ++LD V V+AYGS  PLNQVA V V EPR+
Sbjct: 5   DIKSFERRMDGAVETLRKEFGGLRTGRASTTLLDPVYVDAYGSSSPLNQVATVGVPEPRL 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V VWD+ +V +VE+ I E+ LGLNP  +GQ LR+P+PE  +ERR  L KVA  YAE++
Sbjct: 65  ITVQVWDRSLVKAVEKAIREAGLGLNPQSDGQTLRVPIPELNQERRQELAKVAAKYAEQA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++VRN+RRDGMD LKK  K G  SED   +  + +Q +TD+ IK ID     K+KEIM 
Sbjct: 125 RVAVRNVRRDGMDMLKKLLKDGDISEDEQKTWADKVQALTDAHIKKIDEALATKEKEIMQ 184


>gi|217979929|ref|YP_002364076.1| ribosome recycling factor [Methylocella silvestris BL2]
 gi|254809521|sp|B8EMN5|RRF_METSB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|217505305|gb|ACK52714.1| ribosome recycling factor [Methylocella silvestris BL2]
          Length = 186

 Score =  187 bits (474), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 92/186 (49%), Positives = 129/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   DL +IK RM   I+ LK ++  LRTGR S S+++ V VEAYG  +PLNQVA ++V
Sbjct: 1   MSAEFDLADIKRRMQGAIATLKHELGGLRTGRASASLIEPVNVEAYGQTMPLNQVATISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML V VWDK MV +V++ I  +NLGL+P VEGQVLRI +PE  E+RR  + KVAH 
Sbjct: 61  PEPRMLSVQVWDKGMVGAVDKAIRNANLGLSPTVEGQVLRIRIPELNEQRRKEMAKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE +++++R++RRDG+D LK+  K  + SED     E+++QK TD  + ++DS    K+
Sbjct: 121 YAEDARVAIRHVRRDGIDVLKRLLKDKEISEDDEKRHESEVQKATDQCVADVDSALVAKE 180

Query: 181 KEIMHF 186
           +EIM  
Sbjct: 181 REIMQV 186


>gi|209885087|ref|YP_002288944.1| ribosome recycling factor [Oligotropha carboxidovorans OM5]
 gi|254809524|sp|B6JH69|RRF_OLICO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|209873283|gb|ACI93079.1| ribosome recycling factor [Oligotropha carboxidovorans OM5]
          Length = 183

 Score =  187 bits (474), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 95/180 (52%), Positives = 125/180 (69%), Gaps = 4/180 (2%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+ ++K RM      L+ ++  LRTGR + SML+ V+VEAYGSH+PLNQVA V+V EPR
Sbjct: 6   FDINDLKRRMDGAKESLRYELGGLRTGRAAISMLEPVQVEAYGSHMPLNQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE  I  SNLGLNP  EGQV+R+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMVKAVETAIVNSNLGLNPATEGQVIRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D +KK     K SED       +IQK+TD+ I +ID     K+KEI+
Sbjct: 126 ARVAVRHVRRDGLDIVKKD----KMSEDEQERASGEIQKVTDAAIADIDKLLATKEKEIL 181


>gi|146278188|ref|YP_001168347.1| ribosome recycling factor [Rhodobacter sphaeroides ATCC 17025]
 gi|190360248|sp|A4WUH8|RRF_RHOS5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145556429|gb|ABP71042.1| ribosome recycling factor [Rhodobacter sphaeroides ATCC 17025]
          Length = 188

 Score =  187 bits (474), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 84/182 (46%), Positives = 127/182 (69%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL  I+ RM   +  L+ +  +LRTGR S S+L+ + V+AYG   PLNQ+  + V EPR
Sbjct: 8   IDLDAIQRRMDGAMHALRTEFGSLRTGRASASILEPIHVDAYGQQTPLNQLGTINVPEPR 67

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+V++VWDK M++ VER I +S +G+NP+V+G ++R+P+PE  EERR  L KVA  YAE+
Sbjct: 68  MVVINVWDKGMISKVERAIRDSGIGINPVVDGPIIRLPIPELNEERRKELTKVAAHYAEQ 127

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++ +G A +D      +++Q +TD  I  +D   EEK+KEIM
Sbjct: 128 ARVAIRNVRRDGMDQIKKAKAAGMAEDDQ-KMWSDEVQALTDKAIAAVDKALEEKQKEIM 186

Query: 185 HF 186
             
Sbjct: 187 QV 188


>gi|114768798|ref|ZP_01446424.1| ribosome recycling factor [alpha proteobacterium HTCC2255]
 gi|114549715|gb|EAU52596.1| ribosome recycling factor [alpha proteobacterium HTCC2255]
          Length = 183

 Score =  186 bits (473), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 90/186 (48%), Positives = 127/186 (68%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+  ID+  I+ RM   +  +K +   LRTGR S S+LD + V AYG+  PLNQ A + V
Sbjct: 1   MSDDIDIDAIEKRMNGAVLAMKSEFQALRTGRASASLLDKIMVNAYGAMTPLNQCAGINV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+ V+VWDK ++ SV++ I ESNLG+NP+ +G +LR+P+PE  EERR+ L KVA  
Sbjct: 61  PEPRMITVTVWDKTLIDSVDKAIRESNLGINPVGDGMMLRLPIPELNEERRIELTKVAGG 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++I+VRN+RRDGMD +K   KS + SED      ++IQ++T+ +IK ID   E+K+
Sbjct: 121 YAESARIAVRNVRRDGMDQVK---KSDELSEDDQKIWSDEIQELTNVSIKKIDEVLEQKQ 177

Query: 181 KEIMHF 186
            EIM  
Sbjct: 178 AEIMQV 183


>gi|56552049|ref|YP_162888.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241762003|ref|ZP_04760087.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260752418|ref|YP_003225311.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|59802974|sp|Q9X5F0|RRF_ZYMMO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56543623|gb|AAV89777.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373469|gb|EER63056.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258551781|gb|ACV74727.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 185

 Score =  186 bits (472), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/176 (50%), Positives = 124/176 (70%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           +++ RM   +  LK D   LRTGR S S+LD V V+ YG+++PLNQVA V+V EPRM+ V
Sbjct: 8   DLERRMKGAVESLKSDFSGLRTGRASTSLLDPVTVDVYGANMPLNQVATVSVPEPRMITV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
            VWDK  V  V++ I  + LGLNP+V+GQ+LR+P+P+ TEERR  L K+   Y+EK++I+
Sbjct: 68  QVWDKSNVTPVDKAIRSAGLGLNPVVDGQMLRLPIPDLTEERRKELAKLVGQYSEKARIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VRN+RRDG D +K+  K  + SED     EN++QK+TD TI +ID+    K+KEI+
Sbjct: 128 VRNVRRDGNDQIKQDEKKNEISEDEKKRFENEVQKLTDKTIADIDALAVHKEKEIL 183


>gi|126462131|ref|YP_001043245.1| ribosome recycling factor [Rhodobacter sphaeroides ATCC 17029]
 gi|221639121|ref|YP_002525383.1| ribosome recycling factor [Rhodobacter sphaeroides KD131]
 gi|332558135|ref|ZP_08412457.1| ribosome recycling factor [Rhodobacter sphaeroides WS8N]
 gi|190360247|sp|A3PJF7|RRF_RHOS1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809527|sp|B9KRU0|RRF_RHOSK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|126103795|gb|ABN76473.1| ribosome recycling factor [Rhodobacter sphaeroides ATCC 17029]
 gi|221159902|gb|ACM00882.1| Ribosome recycling factor [Rhodobacter sphaeroides KD131]
 gi|332275847|gb|EGJ21162.1| ribosome recycling factor [Rhodobacter sphaeroides WS8N]
          Length = 188

 Score =  186 bits (472), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 84/182 (46%), Positives = 127/182 (69%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL  I+ RM   +  L+ +  +LRTGR S S+L+ + V+AYG   PLNQ+  + V EPR
Sbjct: 8   IDLDAIQRRMDGAMHALRTEFGSLRTGRASASILEPIHVDAYGQQTPLNQLGTINVPEPR 67

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+V++VWDK M++ VER I +S +G+NP+V+G ++R+P+PE  EERR  L KVA  YAE+
Sbjct: 68  MVVINVWDKGMISKVERAIRDSGIGINPVVDGPIIRLPIPELNEERRKELSKVAAHYAEQ 127

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++ +G A +D      +++Q +TD  I  +D   EEK+KEIM
Sbjct: 128 ARVAIRNVRRDGMDQIKKAKSAGMAEDDQ-KMWSDEVQALTDKAIAAVDKALEEKQKEIM 186

Query: 185 HF 186
             
Sbjct: 187 QV 188


>gi|329850619|ref|ZP_08265464.1| ribosome recycling factor [Asticcacaulis biprosthecum C19]
 gi|328840934|gb|EGF90505.1| ribosome recycling factor [Asticcacaulis biprosthecum C19]
          Length = 185

 Score =  186 bits (472), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 94/180 (52%), Positives = 118/180 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL   KDRM   +  LK+D   LRTGR S S+LD V V+AYGS +PLN  A V+V E RM
Sbjct: 5   DLNRYKDRMDKAVVALKEDYSGLRTGRASASLLDQVVVDAYGSTMPLNACAAVSVPEARM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + VSVWD+ +  SVE+ I  + LGLNPI +GQ LRIP+P  TEERR  LVK+A  YAE  
Sbjct: 65  ISVSVWDRGLTVSVEKAIRNAGLGLNPITDGQTLRIPIPPLTEERRKELVKIAGKYAETQ 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++VRN+RR+ MD LKK+ K+   SED       +IQ  TDS IK ID   + K+ EIM 
Sbjct: 125 RVAVRNVRREAMDDLKKAEKASDISEDEEKKGGTEIQGFTDSAIKRIDEVLKAKEAEIMQ 184


>gi|300023426|ref|YP_003756037.1| ribosome recycling factor [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525247|gb|ADJ23716.1| ribosome recycling factor [Hyphomicrobium denitrificans ATCC 51888]
          Length = 187

 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 90/178 (50%), Positives = 126/178 (70%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D+  ++ RM  ++  LK++   LRTGR S ++LD V+V  YGS +PLNQVA V+V EPRM
Sbjct: 7   DINEVEKRMRASLDALKREFSGLRTGRASANLLDPVQVMVYGSRMPLNQVATVSVPEPRM 66

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V VWD+  V +V++GI E+NLGLNPI++GQ+LR+P+P  T +RR  LVK+AH YAE+S
Sbjct: 67  ISVQVWDRSNVTAVDKGIREANLGLNPIMDGQILRLPIPSLTADRRQELVKLAHKYAEQS 126

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K++VRN+RR+ MD LKK  K GK S+D        +Q++TD  IK +DS    K+ EI
Sbjct: 127 KVAVRNVRREAMDLLKKLEKDGKMSQDDHRGHSEKVQELTDRIIKEVDSTLVTKEAEI 184


>gi|330993376|ref|ZP_08317311.1| Ribosome-recycling factor [Gluconacetobacter sp. SXCC-1]
 gi|329759406|gb|EGG75915.1| Ribosome-recycling factor [Gluconacetobacter sp. SXCC-1]
          Length = 188

 Score =  186 bits (471), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 84/179 (46%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++  RM   I  L++D   LR+GR SP++L+ V+VEAYG  VPL QV ++ V E RML
Sbjct: 9   LADLTRRMDGAIESLRRDFAGLRSGRASPALLEPVRVEAYGGEVPLTQVGSIAVPEARML 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWD+ +V +VER I ++ LGLNP  +GQ +R+P+P+ TEERR  L + A  YAE  +
Sbjct: 69  TVQVWDRTLVGAVERAIRDAGLGLNPAADGQTVRVPIPQLTEERRNELARAAGKYAENGR 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VR +RRDGMD  +K  K+G  SED V +  + IQK+TD  ++ +D    EK++EI  
Sbjct: 129 IAVRGVRRDGMDQTRKLEKAGDISEDDVKTWSDAIQKLTDQYVRRVDELLVEKEREIKQ 187


>gi|148553387|ref|YP_001260969.1| ribosome recycling factor [Sphingomonas wittichii RW1]
 gi|166231512|sp|A5V3G5|RRF_SPHWW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|148498577|gb|ABQ66831.1| ribosome recycling factor [Sphingomonas wittichii RW1]
          Length = 185

 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/168 (52%), Positives = 117/168 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  +++ RM   +  LK D+  LRTGR S ++LD V VE YG+H+PLNQ A VT  EPRM
Sbjct: 5   DKADLERRMHGAVEALKSDLTGLRTGRASVNLLDPVTVEIYGAHMPLNQAATVTAPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWD+  V  V++ I  + LGLNPIV+GQ LRIP+P+ TEERR  L K+A  YAEK+
Sbjct: 65  LSVQVWDRSNVGPVDKAIRSAGLGLNPIVDGQTLRIPIPDLTEERRKELAKLASQYAEKA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           +++VRN+RRDGMD LK   K G+  ED     E ++QK+TD+TI ++D
Sbjct: 125 RVAVRNVRRDGMDSLKTDEKKGEIGEDDRKRRETEVQKLTDATISDVD 172


>gi|114797846|ref|YP_760475.1| ribosome recycling factor [Hyphomonas neptunium ATCC 15444]
 gi|123028025|sp|Q0C1B8|RRF_HYPNA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114738020|gb|ABI76145.1| ribosome recycling factor [Hyphomonas neptunium ATCC 15444]
          Length = 184

 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/178 (48%), Positives = 126/178 (70%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+I+ RM   ++ L  +   LRTGR S ++LD ++V AYG   PL+QVA+VTV + RML 
Sbjct: 6   QDIERRMEGALASLASEFAGLRTGRASVNLLDSIQVPAYGGVTPLSQVASVTVSDTRMLS 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+VWDK +V + +R I +S LGLNP+++GQ LRIP+P   EERR+ L K+A  YAE +++
Sbjct: 66  VNVWDKTVVGAADRAIRDSGLGLNPVMDGQTLRIPIPPLNEERRVELTKIAGKYAEAARV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +VRN+RRDGMD LKK+ K G+ SED   +L  ++QK+TD+ +K +D   + K+ EIM 
Sbjct: 126 AVRNVRRDGMDDLKKAEKDGEISEDRHRALTEEVQKLTDAFVKRVDEALKAKEAEIMQ 183


>gi|296115044|ref|ZP_06833686.1| ribosome recycling factor [Gluconacetobacter hansenii ATCC 23769]
 gi|295978381|gb|EFG85117.1| ribosome recycling factor [Gluconacetobacter hansenii ATCC 23769]
          Length = 188

 Score =  185 bits (469), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 84/179 (46%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++  RM   I  L++D   LR+GR SP++L+ V+VEAYG  VPL QV ++ V E RML
Sbjct: 9   LADVTRRMDGAIESLRRDFAGLRSGRASPALLEPVRVEAYGGEVPLTQVGSIAVPEARML 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWD+ +V +VER I +S LGLNP  +GQ +R+P+P+ TEERR  L + A  YAE +K
Sbjct: 69  TVQVWDRSLVGAVERAIRDSGLGLNPAADGQTVRVPIPQLTEERRNELARAAGKYAENAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VR +RRDGM+  +   K G+ S+D V    + IQK+TD  +K +D    EK++EI  
Sbjct: 129 IAVRGVRRDGMEQTRGQEKKGEISQDDVKVWSDAIQKLTDQYVKRVDELLAEKEREIKQ 187


>gi|258541747|ref|YP_003187180.1| ribosome recycling factor [Acetobacter pasteurianus IFO 3283-01]
 gi|329114467|ref|ZP_08243229.1| Ribosome-recycling factor [Acetobacter pomorum DM001]
 gi|256632825|dbj|BAH98800.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-01]
 gi|256635882|dbj|BAI01851.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-03]
 gi|256638937|dbj|BAI04899.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-07]
 gi|256641991|dbj|BAI07946.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645046|dbj|BAI10994.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648101|dbj|BAI14042.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651154|dbj|BAI17088.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654145|dbj|BAI20072.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-12]
 gi|326696543|gb|EGE48222.1| Ribosome-recycling factor [Acetobacter pomorum DM001]
          Length = 187

 Score =  185 bits (469), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 86/179 (48%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++K RM   +  L++D   LR+GR SP++L+ V+VEAYG  VPL QV ++ V E RM+
Sbjct: 8   LDDLKRRMDGALDSLRRDFSGLRSGRASPALLEPVRVEAYGGEVPLTQVGSIAVPEARMI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWD+ +  +VER I +S LGLNP  EGQ +R+P+P+ TEERR  L K A  YAE  K
Sbjct: 68  TVQVWDRALAGAVERAIRDSGLGLNPAGEGQTIRVPIPQLTEERRNELAKAAARYAEGGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VR +RRDGMD  K   K G+ S+D V +  + IQK+TD  +K ID    +K KEI  
Sbjct: 128 VAVRGVRRDGMDKAKGFEKKGEISQDDVKTWSDAIQKLTDQYVKKIDDMLADKDKEIKQ 186


>gi|332186160|ref|ZP_08387906.1| ribosome recycling factor [Sphingomonas sp. S17]
 gi|332013975|gb|EGI56034.1| ribosome recycling factor [Sphingomonas sp. S17]
          Length = 185

 Score =  185 bits (469), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 90/168 (53%), Positives = 117/168 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  +++ RM   +  LK D+  LRTGR S ++LD V VE YGSH+PLNQVA V+  EPRM
Sbjct: 5   DKSDLERRMQGAVESLKHDLNGLRTGRASTALLDPVTVEVYGSHMPLNQVATVSAPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWDK  V+SVE+ I  + LGLNPI +GQ LR+P+P+ TEERR  L K+A+ YAE +
Sbjct: 65  LSVQVWDKSNVSSVEKAIRSAGLGLNPINDGQTLRLPIPDLTEERRKELAKLANKYAESA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           +I+VRN+RRDGMD LK   K G   ED     E ++QK+TD+TI  +D
Sbjct: 125 RIAVRNVRRDGMDSLKTDEKKGVFGEDERKRHETEVQKLTDATIAELD 172


>gi|4768863|gb|AAD29657.1|AF124757_17 ribosome recycling factor [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 185

 Score =  184 bits (468), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 87/176 (49%), Positives = 124/176 (70%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           +++ R+   +  LK D   LRTGR S S+LD V V+ YG+++PLNQVA V+V EPRM+ V
Sbjct: 8   DLERRIKGAVESLKSDFSGLRTGRASTSLLDPVTVDVYGANMPLNQVATVSVPEPRMITV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
            VWDK  V  V++ I  + LGLNP+V+GQ+LR+P+P+ TEERR  L K+   Y+EK++I+
Sbjct: 68  QVWDKSNVTPVDKAIRSAGLGLNPVVDGQMLRLPIPDLTEERRKELAKLVGQYSEKARIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VRN+RRDG D +K+  K  + SED     EN++QK+TD TI +ID+    K+KEI+
Sbjct: 128 VRNVRRDGNDQIKQDEKKNEISEDEKKRFENEVQKLTDKTIADIDALAVHKEKEIL 183


>gi|77463257|ref|YP_352761.1| ribosome recycling factor [Rhodobacter sphaeroides 2.4.1]
 gi|123592078|sp|Q3J2X4|RRF_RHOS4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|77387675|gb|ABA78860.1| ribosome recycling factor [Rhodobacter sphaeroides 2.4.1]
          Length = 188

 Score =  184 bits (468), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 84/182 (46%), Positives = 126/182 (69%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL  I+ RM   +  L+ +  +LRTGR S S+L+ + V+AYG   PLNQ+  + V EPR
Sbjct: 8   IDLDAIQRRMDGAMHALRTEFGSLRTGRASASILEPIHVDAYGQQTPLNQLGTINVPEPR 67

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+V++VWDK M++ VER I +S +G+NP+V+G ++R+P+PE  EERR  L KVA  YAE+
Sbjct: 68  MVVINVWDKGMISKVERAIRDSGIGINPVVDGPIIRLPIPELNEERRKELSKVAAHYAEQ 127

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++  G A +D      +++Q +TD  I  +D   EEK+KEIM
Sbjct: 128 ARVAIRNVRRDGMDQIKKAKSVGMAEDDQ-KMWSDEVQALTDKAIAAVDKALEEKQKEIM 186

Query: 185 HF 186
             
Sbjct: 187 QV 188


>gi|83311594|ref|YP_421858.1| ribosome recycling factor [Magnetospirillum magneticum AMB-1]
 gi|123541757|sp|Q2W4C6|RRF_MAGMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|82946435|dbj|BAE51299.1| Ribosome recycling factor [Magnetospirillum magneticum AMB-1]
          Length = 190

 Score =  184 bits (467), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 93/179 (51%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++I  RM   +  LKK+   LR+GR S ++LD V VEAYG  +PL+Q   V V EPRML 
Sbjct: 12  KDITRRMDSAVEVLKKEFSGLRSGRASINLLDPVVVEAYGQTMPLSQCGTVGVPEPRMLT 71

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK  V +VE+ I  + LGLNP  +GQ++R+P+P   EERR  L KVA  Y+E+++I
Sbjct: 72  VQVWDKSQVKAVEKAIANAGLGLNPQADGQMIRVPIPPLNEERRKELQKVAGKYSEQARI 131

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRDGMD LKK  K G  SED +   E +IQ ITD TIK ID     K+KEIM  
Sbjct: 132 SVRNVRRDGMDTLKKMEKDGHISEDEIKKHEKEIQAITDETIKKIDEALGHKEKEIMQV 190


>gi|162147934|ref|YP_001602395.1| ribosome recycling factor [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542552|ref|YP_002274781.1| ribosome recycling factor [Gluconacetobacter diazotrophicus PAl 5]
 gi|189044057|sp|A9HKW6|RRF_GLUDA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|161786511|emb|CAP56093.1| Ribosome recycling factor [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530229|gb|ACI50166.1| ribosome recycling factor [Gluconacetobacter diazotrophicus PAl 5]
          Length = 188

 Score =  184 bits (467), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 84/179 (46%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++  RM   +  L++D   LR+GR SP++++ V+VEAYG  VPL QV ++ V E RML
Sbjct: 9   LDDLTRRMDGALESLRRDFAGLRSGRASPALIEPVRVEAYGGEVPLTQVGSIAVPEARML 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWD+ +V +VER I +S LGLNP  +GQ +R+P+P+ TEERR  L + A  Y+E +K
Sbjct: 69  TVQVWDRSLVGAVERAIRDSGLGLNPAADGQTVRVPIPQLTEERRGELARTAGKYSENAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VR +RRDGMD  K   K G  S+D V    + IQK+TD  +K ID    EK++EI  
Sbjct: 129 IAVRGVRRDGMDQTKAQEKKGDISQDDVKVWSDAIQKLTDQYVKRIDEMLAEKEREIKQ 187


>gi|149186826|ref|ZP_01865136.1| ribosome recycling factor [Erythrobacter sp. SD-21]
 gi|148829493|gb|EDL47934.1| ribosome recycling factor [Erythrobacter sp. SD-21]
          Length = 185

 Score =  184 bits (466), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 92/179 (51%), Positives = 125/179 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  +I+ RM   I  LK D+  LRTGR + S+LD V VE YGS +PLNQVA V+  EPRM
Sbjct: 5   DKSDIERRMKGAIESLKGDLSGLRTGRANTSLLDPVVVEVYGSMMPLNQVATVSAPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWDK  V +VE+GI ++NLGLNP+++GQ +R+P+P+ TEERR  L K+A  YAE+S
Sbjct: 65  LSVQVWDKANVTAVEKGIAKANLGLNPMIDGQNVRLPMPDLTEERRRDLAKLAGQYAEQS 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KI++RN+RRDGM+ LK+  K  + SED     E+++QK+TD  +   +     K+KEIM
Sbjct: 125 KIAIRNVRRDGMEALKEDEKKKEISEDDRKRSEDEVQKLTDKYVAEAEQAASAKEKEIM 183


>gi|58040244|ref|YP_192208.1| ribosome recycling factor [Gluconobacter oxydans 621H]
 gi|62900775|sp|Q5FPZ4|RRF_GLUOX RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|58002658|gb|AAW61552.1| Ribosome Recycling Factor (RRF) [Gluconobacter oxydans 621H]
          Length = 188

 Score =  183 bits (465), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 87/177 (49%), Positives = 121/177 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++  RM   I  L++D+  LR+GR SP++L+ V+VEAYGS VPL+QV ++ V E RML
Sbjct: 9   LADLTRRMDGAIESLRRDLSGLRSGRASPNLLEPVRVEAYGSEVPLSQVGSIAVPEARML 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            VSVWD+ +V +VER I +S LGLNP  +GQ +R+P+P  TEERR  L + A  YAE  K
Sbjct: 69  TVSVWDRTVVGAVERAIRDSGLGLNPSTDGQTVRVPIPALTEERRNELARAASRYAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ISVR +RRDGM+  K   K  + S+D + +  + IQK+TD  IK +D  F +K++EI
Sbjct: 129 ISVRGVRRDGMEQTKALEKKSEISQDDMKTWTDAIQKLTDQYIKKVDDIFADKEREI 185


>gi|144897597|emb|CAM74461.1| Ribosome recycling factor [Magnetospirillum gryphiswaldense MSR-1]
          Length = 190

 Score =  183 bits (464), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 87/179 (48%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +++  RM +T+  LKK+   LR+GR   S+L+ V VEAYG  +P+ Q   + V EPRML 
Sbjct: 12  KDVAHRMDNTVEVLKKEFSGLRSGRAVASLLEPVVVEAYGQTMPITQCGTIAVPEPRMLT 71

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK  V +VE+ I E+ LGLNP  +GQ++R+P+P   EERR  L KVA  YAE+++I
Sbjct: 72  VQVWDKGQVKAVEKAIREAGLGLNPQTDGQLVRVPIPSLNEERRKELQKVAGKYAEQARI 131

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRDGMD LKK  K G  SED +   E ++Q +TD TIK +D     K+KEIM  
Sbjct: 132 AIRNVRRDGMDTLKKMEKDGHISEDEIKKHEKEVQSLTDDTIKKVDETLAHKEKEIMQV 190


>gi|260433807|ref|ZP_05787778.1| ribosome recycling factor [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417635|gb|EEX10894.1| ribosome recycling factor [Silicibacter lacuscaerulensis ITI-1157]
          Length = 187

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 86/181 (47%), Positives = 126/181 (69%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D+ ++K RM   ++ L+ +  +LRTGR S SMLD + V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDIDDLKRRMEGAMANLRTEFASLRTGRASASMLDPIMVDAYGSMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKSLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAGHYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++ +G  SED     EN++Q++TD  IK +D+  E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKAKANG-LSEDDQKFWENEVQELTDQMIKAVDTALEAKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|294012399|ref|YP_003545859.1| ribosome recycling factor RF-4 [Sphingobium japonicum UT26S]
 gi|292675729|dbj|BAI97247.1| ribosome recycling factor RF-4 [Sphingobium japonicum UT26S]
          Length = 185

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/179 (52%), Positives = 124/179 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  +++ RM   +  LK D+  LRTGR +  +LD V VE YG+H+PLNQVA V+  EPRM
Sbjct: 5   DKADLERRMAGAVESLKGDLSGLRTGRANIQLLDPVTVEVYGAHMPLNQVATVSAPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWDK  V  V++ I  + LGLNPIV+GQ LR+P+P+ TEERR  L K+A  YAE +
Sbjct: 65  LSVQVWDKSNVGPVDKAIRSAGLGLNPIVDGQTLRLPIPDLTEERRKELAKLASKYAEGA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +I+VRN+RRDGMD LK   K G+ SED     E ++QK+TDSTI +ID+    K+KEI+
Sbjct: 125 RIAVRNVRRDGMDSLKTDEKKGEISEDERKRKETEVQKLTDSTIADIDAATAAKEKEIL 183


>gi|259415740|ref|ZP_05739660.1| ribosome recycling factor [Silicibacter sp. TrichCH4B]
 gi|259347179|gb|EEW58956.1| ribosome recycling factor [Silicibacter sp. TrichCH4B]
          Length = 187

 Score =  182 bits (461), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 88/181 (48%), Positives = 122/181 (67%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMANLKTEFASLRTGRASASMLEPVMVDAYGSQTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAGQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++SVRN+RRDGMD +KK++  G  SED     E ++Q +TD  IK +D+  E K+ EIM
Sbjct: 127 ARVSVRNVRRDGMDQIKKAKSEG-MSEDDQKFWEAEVQDLTDKMIKAVDAALETKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|46202355|ref|ZP_00053346.2| COG0233: Ribosome recycling factor [Magnetospirillum
           magnetotacticum MS-1]
          Length = 173

 Score =  182 bits (461), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 90/173 (52%), Positives = 114/173 (65%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +  LKK+   LR+GR S ++LD V VEAYG  +PL+Q   V V EPRML V VWDK
Sbjct: 1   MDSAVEVLKKEFSGLRSGRASVNLLDPVVVEAYGQTMPLSQCGTVGVPEPRMLTVQVWDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             V +VE+ I  + LGLNP  +GQ++R+P+P   EERR  L KVA  YAE+++ISVRN+R
Sbjct: 61  SQVKAVEKAIANAGLGLNPQADGQMIRVPIPALNEERRKELQKVAGKYAEQARISVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RDGMD LKK  K G  SED +   E ++Q +TD TIK ID     K+KEIM  
Sbjct: 121 RDGMDSLKKMEKDGHISEDEIKKHEKEVQTVTDDTIKKIDEVLGHKEKEIMQV 173


>gi|254510739|ref|ZP_05122806.1| ribosome recycling factor [Rhodobacteraceae bacterium KLH11]
 gi|221534450|gb|EEE37438.1| ribosome recycling factor [Rhodobacteraceae bacterium KLH11]
          Length = 187

 Score =  182 bits (461), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 87/181 (48%), Positives = 125/181 (69%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ L+ +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMANLRTEFASLRTGRASASMLEPVMVDAYGSMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTVNVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAGQYAES 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN+RRDGMD +KK++  G  SED     E+++Q++TD+ IK++D   E K+ EIM
Sbjct: 127 ARVSIRNVRRDGMDQIKKAKADG-MSEDDQKFWESEVQELTDAMIKSVDEALETKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|260575886|ref|ZP_05843881.1| ribosome recycling factor [Rhodobacter sp. SW2]
 gi|259021812|gb|EEW25113.1| ribosome recycling factor [Rhodobacter sp. SW2]
          Length = 188

 Score =  181 bits (460), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 85/182 (46%), Positives = 125/182 (68%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL  I+ RM   +  L+ +  +LRTGR S S+L+ + V+AYG   P+NQ+  V V EPR
Sbjct: 8   IDLDAIQRRMDGALHALRTEFGSLRTGRASASILEPIHVDAYGQMTPINQLGTVNVPEPR 67

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+V++VWDK MV  VER I +S +G+NP+V+G ++R+P+PE  EERR  L KVA  YAE 
Sbjct: 68  MVVINVWDKAMVQKVERAIRDSGIGINPVVDGPLIRLPIPELNEERRAQLSKVAAHYAET 127

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++ +G A +D     E ++Q +TD  I N+D   E K++EIM
Sbjct: 128 ARVAIRNVRRDGMDQIKKAKAAGMAEDDQKMWSE-EVQDLTDKAIANVDRTLELKQQEIM 186

Query: 185 HF 186
             
Sbjct: 187 QV 188


>gi|99081254|ref|YP_613408.1| ribosome recycling factor [Ruegeria sp. TM1040]
 gi|122984285|sp|Q1GGS0|RRF_SILST RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|99037534|gb|ABF64146.1| ribosome recycling factor [Ruegeria sp. TM1040]
          Length = 187

 Score =  181 bits (460), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 87/181 (48%), Positives = 123/181 (67%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMANLKTEFASLRTGRASASMLEPVMVDAYGSMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAGQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN+RRDGMD +KK++  G  SED     E ++Q++TD  IK +D+  E K+ EIM
Sbjct: 127 ARVSIRNVRRDGMDQIKKAKADG-MSEDDQKFWETEVQELTDKMIKAVDAALETKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|218514368|ref|ZP_03511208.1| ribosome recycling factor [Rhizobium etli 8C-3]
          Length = 131

 Score =  181 bits (460), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 86/131 (65%), Positives = 107/131 (81%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ID++ +K RM   +S  K D+ +LRTGR S ++LD V +EAYGS VPLNQVAN+TV
Sbjct: 1   MSEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRVPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV++VERGI ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLTVSVWDKSMVSAVERGIRESNLGLNPIVDGQSLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRN 131
           YAEKSK+++R+
Sbjct: 121 YAEKSKVAIRH 131


>gi|304391648|ref|ZP_07373590.1| ribosome recycling factor [Ahrensia sp. R2A130]
 gi|303295877|gb|EFL90235.1| ribosome recycling factor [Ahrensia sp. R2A130]
          Length = 186

 Score =  181 bits (459), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 85/186 (45%), Positives = 123/186 (66%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   IDL++++ RM  +++   KD+  LRTGR S S+LD V V+AYG  +P+NQVANV  
Sbjct: 1   MADGIDLKDVEKRMETSLASFTKDLGGLRTGRASASLLDPVMVDAYGQKMPINQVANVGA 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP+++ V +WDK MV  VE+ + E+ LGLNP+V+GQ LRIP+P+  EERR  LVKVA  
Sbjct: 61  PEPKLITVQIWDKSMVGPVEKAVREAGLGLNPVVDGQNLRIPMPDLNEERRRDLVKVAKT 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE +K+++R++RRD M+ LKK+ K  +  +D        +QK+TD  +  +D     K+
Sbjct: 121 YAEDAKVTIRHVRRDAMETLKKAEKDKEIGQDEARGSSEKVQKMTDDKVNEVDKVLATKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|182677297|ref|YP_001831443.1| ribosome recycling factor [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|238691217|sp|B2ID97|RRF_BEII9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|182633180|gb|ACB93954.1| ribosome recycling factor [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 186

 Score =  181 bits (459), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 90/185 (48%), Positives = 124/185 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   I+ LK ++  LRTGR + S+L+ V V+AYG  +PLNQVA ++V
Sbjct: 1   MSAEFDISDLKRRMQGAIATLKHELGGLRTGRATASLLEPVHVDAYGQSLPLNQVATISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML V VWDK MV  V++ I +SNLGL+P VEGQ+LRI +PE  E+RR  + KVAH 
Sbjct: 61  AEARMLSVQVWDKGMVGPVDKAIRDSNLGLSPTVEGQILRIRIPELNEQRRKEMAKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE++K++VR++RRDG+D LKK  K     ED       +IQK+TD  +  +D     K+
Sbjct: 121 YAEEAKVAVRHVRRDGIDTLKKLLKDKAIGEDDEKRHAAEIQKVTDQFVGEVDQALAAKE 180

Query: 181 KEIMH 185
           KEIM 
Sbjct: 181 KEIMQ 185


>gi|110679817|ref|YP_682824.1| ribosome recycling factor [Roseobacter denitrificans OCh 114]
 gi|123065540|sp|Q166F5|RRF_ROSDO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|109455933|gb|ABG32138.1| ribosome recycling factor [Roseobacter denitrificans OCh 114]
          Length = 187

 Score =  181 bits (458), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 90/182 (49%), Positives = 121/182 (66%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +I+ RM   IS LK +  +LRTGR S SML+ V V+AYG   P+NQV  V V EP
Sbjct: 6   MLDTDDIERRMDGAISSLKTEFASLRTGRASASMLEPVMVDAYGQRTPINQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 66  RMVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELSKVAGQYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++S+RNIRRDGMD +KK++  G  SED     E ++Q+ITD  IK ID     K+ EI
Sbjct: 126 HARVSIRNIRRDGMDQIKKAKADG-LSEDDQKLWEGEVQEITDRYIKGIDDQLATKQAEI 184

Query: 184 MH 185
           M 
Sbjct: 185 MQ 186


>gi|56696546|ref|YP_166903.1| ribosome recycling factor [Ruegeria pomeroyi DSS-3]
 gi|60390661|sp|Q5LSV2|RRF_SILPO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56678283|gb|AAV94949.1| ribosome recycling factor [Ruegeria pomeroyi DSS-3]
          Length = 187

 Score =  180 bits (457), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 85/181 (46%), Positives = 123/181 (67%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ LK +  +LRTGR S SML+ ++VEAYG   P+NQ+  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMANLKTEFASLRTGRASGSMLEPIQVEAYGQMTPINQIGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK MV  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKSMVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAGQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++  G  SED     E ++Q++TD  IK +D+  E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKAKADG-ISEDDQKFWEAEVQELTDKMIKVVDAALETKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|260426114|ref|ZP_05780093.1| ribosome recycling factor [Citreicella sp. SE45]
 gi|260420606|gb|EEX13857.1| ribosome recycling factor [Citreicella sp. SE45]
          Length = 187

 Score =  180 bits (457), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 86/181 (47%), Positives = 123/181 (67%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   +S L+ +  +LRTGR S SML+ V+VEAYG   P+NQV  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMSNLRTEFASLRTGRASGSMLEPVQVEAYGQMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAGHYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++  G A +D     E+++Q ITD  IK +D   E K++EIM
Sbjct: 127 ARVAIRNVRRDGMDQVKKAKADGMAEDDQ-KFWESEVQDITDLYIKKVDEALEHKQEEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|83592924|ref|YP_426676.1| ribosome recycling factor [Rhodospirillum rubrum ATCC 11170]
 gi|83575838|gb|ABC22389.1| ribosome recycling factor [Rhodospirillum rubrum ATCC 11170]
          Length = 191

 Score =  180 bits (457), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 84/177 (47%), Positives = 118/177 (66%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           +++ RM   +  L+KD   LRTGR S S+LD V VEAYG  +PL QVA V+V EPRM+ V
Sbjct: 14  DLRHRMDTAVEVLRKDFAGLRTGRASTSLLDSVMVEAYGQAMPLAQVATVSVPEPRMISV 73

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
            VWD+ M  +V++ I ++ LGLNP  +GQ++R+P+P   EERR  L KVA  YAE+++++
Sbjct: 74  QVWDRGMAKAVDKAIRDAGLGLNPASDGQLIRVPIPPLNEERRTELTKVAGKYAEQTRVA 133

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           VRN+RRDGMD LKK  K    S+D       ++Q +TD TI+ +D     K++EIM 
Sbjct: 134 VRNVRRDGMDQLKKMEKDSAISQDEHKKFGAEVQALTDETIRRLDEALAHKEQEIMQ 190


>gi|114764271|ref|ZP_01443499.1| ribosome recycling factor [Pelagibaca bermudensis HTCC2601]
 gi|114543219|gb|EAU46236.1| ribosome recycling factor [Roseovarius sp. HTCC2601]
          Length = 187

 Score =  180 bits (456), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/181 (47%), Positives = 124/181 (68%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ L+ +  +LRTGR S SML+ V+VEAYG   P+NQV  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMANLRTEFASLRTGRASASMLEPVQVEAYGQMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVNKVEKAIRESGLGINPQMNGTIIMLPIPELNEERRRELGKVAGQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMD +KK++  G  SED     E ++Q++TD+ IK +D   E K++EIM
Sbjct: 127 ARVAVRNVRRDGMDQIKKAKADG-MSEDDQKFWETEVQELTDAYIKKVDQSLETKQEEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|288958464|ref|YP_003448805.1| ribosome recycling factor [Azospirillum sp. B510]
 gi|288910772|dbj|BAI72261.1| ribosome recycling factor [Azospirillum sp. B510]
          Length = 185

 Score =  180 bits (456), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/181 (47%), Positives = 125/181 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL ++K RM   +   +K++  LRTGR S ++L+ V VEAYGS + L +VA V+V EPR+
Sbjct: 5   DLSDLKRRMEGALDSFRKELGGLRTGRASSNLLEPVMVEAYGSRMHLREVATVSVPEPRL 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V VWD+ M  +VE+ I +S LGLNP  EGQV+R+P+P+ T+ERR  L KVAH YAE+ 
Sbjct: 65  ISVQVWDRGMTKAVEKAIRDSGLGLNPQAEGQVIRVPLPDLTQERRAELAKVAHKYAEQC 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++++RNIRRDGMD LKK+ K+ + ++D      + +Q +TD  IK +D    +K+KEIM 
Sbjct: 125 RVAIRNIRRDGMDGLKKAEKASEITQDEHKVQADKVQVLTDQHIKLVDDSLAQKEKEIMQ 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|48474234|sp|Q8L1H5|RRF_PARZE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|20429121|emb|CAD24430.1| ribosome recycling factor [Paracoccus zeaxanthinifaciens]
          Length = 187

 Score =  180 bits (456), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/181 (46%), Positives = 120/181 (66%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL +++ RM   +  L+ +  +LRTGR S SM++ V+VEAYG   P+NQV  V V EPR
Sbjct: 7   IDLDDLERRMKGAMDSLRAEFASLRTGRASASMVEPVQVEAYGQMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK MV  VE+ I ES LG+NP   G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGMVGKVEKAIRESGLGINPQTNGTIIMLPIPELNEERRRELTKVAAQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK + +G   +D     E  +Q++TD +I N+D   E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKGKANGMPEDDQ-KFWETAVQELTDKSIGNVDQALEAKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|84500821|ref|ZP_00999056.1| ribosome recycling factor [Oceanicola batsensis HTCC2597]
 gi|84390888|gb|EAQ03306.1| ribosome recycling factor [Oceanicola batsensis HTCC2597]
          Length = 187

 Score =  179 bits (455), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/181 (47%), Positives = 124/181 (68%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  +++ RM  T+S L+ +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLQRRMEGTMSNLRTEFASLRTGRASASMLEPVMVDAYGSMTPVNQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTVNVWDKNLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAAQYAES 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++  G  SED     E+++Q +TD+  K +D   E K++EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKAKADG-LSEDDQKFWESEVQDLTDTYTKKVDEALEAKQEEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|126737623|ref|ZP_01753353.1| ribosome recycling factor [Roseobacter sp. SK209-2-6]
 gi|126721016|gb|EBA17720.1| ribosome recycling factor [Roseobacter sp. SK209-2-6]
          Length = 203

 Score =  179 bits (455), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/181 (48%), Positives = 125/181 (69%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 23  LDTDDLKRRMEGAMANLKTEFASLRTGRASGSMLEPVMVDAYGSMTPINQVGTVNVPEPR 82

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 83  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAGQYAEH 142

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN+RRDGMD +KK++  G  SED     E ++Q++TD++IK +D+  E K+ EIM
Sbjct: 143 ARVSIRNVRRDGMDQIKKAKADG-MSEDDQKFWEAEVQELTDASIKLVDTALETKQAEIM 201

Query: 185 H 185
            
Sbjct: 202 Q 202


>gi|163736296|ref|ZP_02143715.1| ribosome recycling factor [Phaeobacter gallaeciensis BS107]
 gi|163741175|ref|ZP_02148567.1| ribosome recycling factor [Phaeobacter gallaeciensis 2.10]
 gi|161385528|gb|EDQ09905.1| ribosome recycling factor [Phaeobacter gallaeciensis 2.10]
 gi|161390166|gb|EDQ14516.1| ribosome-recycling factor [Phaeobacter gallaeciensis BS107]
          Length = 187

 Score =  179 bits (455), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/182 (47%), Positives = 124/182 (68%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +++ RM   ++ LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EP
Sbjct: 6   ILDTDDLQRRMDGAMANLKTEFASLRTGRASASMLEPVMVDAYGSMTPINQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 66  RMVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRDLTKVAGQYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++S+RN+RRDGMD +KK++  G  SED     E ++Q++TD  IK +D+  E K+ EI
Sbjct: 126 HARVSIRNVRRDGMDQIKKAKADG-MSEDDQKLWEGEVQELTDKMIKVVDAALETKQAEI 184

Query: 184 MH 185
           M 
Sbjct: 185 MQ 186


>gi|332982468|ref|YP_004463909.1| ribosome recycling factor [Mahella australiensis 50-1 BON]
 gi|332700146|gb|AEE97087.1| ribosome recycling factor [Mahella australiensis 50-1 BON]
          Length = 186

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 82/172 (47%), Positives = 124/172 (72%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   I  LKK++ TLRTGR +P +LD + V+ YG+  P+ Q+ N+T  EPR+LV++ WD
Sbjct: 13  KMNKVIDVLKKELSTLRTGRANPQILDNITVDYYGASTPITQLGNITSPEPRLLVIAPWD 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            +++  +E+ I +S+LG+NP  +G+V+R+ +PE TEERR  LVK+A    E++K++VRNI
Sbjct: 73  PKIIKDMEKAIQKSDLGINPSNDGKVIRLVIPELTEERRKELVKLARKMGEEAKVAVRNI 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+ +DHLKK +K G  SED     ++DIQK+TD+ I  IDS  E+K+K+IM
Sbjct: 133 RREAIDHLKKQKKDGDISEDEEKRQQDDIQKLTDNKINEIDSIIEQKEKDIM 184


>gi|254477526|ref|ZP_05090912.1| ribosome recycling factor [Ruegeria sp. R11]
 gi|214031769|gb|EEB72604.1| ribosome recycling factor [Ruegeria sp. R11]
          Length = 187

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/182 (47%), Positives = 123/182 (67%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +++ RM   +  LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EP
Sbjct: 6   ILDTDDLQRRMDGAMGNLKTEFASLRTGRASASMLEPVMVDAYGSMTPINQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 66  RMVTVNVWDKALVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAGQYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++++RN+RRDGMD +KK++  G  SED     E ++Q++TD  IK +D+  E K+ EI
Sbjct: 126 SARVAIRNVRRDGMDQIKKAKADG-MSEDDQKLWEGEVQELTDKMIKAVDAALEVKQAEI 184

Query: 184 MH 185
           M 
Sbjct: 185 MQ 186


>gi|83955546|ref|ZP_00964177.1| ribosome recycling factor [Sulfitobacter sp. NAS-14.1]
 gi|83840190|gb|EAP79365.1| ribosome recycling factor [Sulfitobacter sp. NAS-14.1]
          Length = 187

 Score =  179 bits (454), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/182 (47%), Positives = 121/182 (66%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +++ RM   I+ L+ +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EP
Sbjct: 6   MLDTDDLERRMNGAITSLRTEFASLRTGRASASMLEPVMVDAYGSSTPINQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 66  RMVTINVWDKALVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTQLTKVAGQYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++S+RNIRRDGMD +KK++  G  SED     E ++Q +T+  I  ID   E K+ EI
Sbjct: 126 SARVSIRNIRRDGMDQIKKAKADG-MSEDDQKVWEGEVQDMTNKFIAQIDEQLESKQAEI 184

Query: 184 MH 185
           M 
Sbjct: 185 MQ 186


>gi|258511403|ref|YP_003184837.1| ribosome recycling factor [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478129|gb|ACV58448.1| ribosome recycling factor [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 187

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 126/180 (70%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +QN+++RM   I  L+++  T+R GR +PSMLD V VE YG+ +P+NQVA+VT  EPR+L
Sbjct: 8   IQNLQERMDKAIQNLRREFATVRAGRAAPSMLDHVMVEYYGAQMPVNQVASVTSPEPRLL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S WDK M++ +E+ I +S+LGLNP  +G V+R+ +P  TE+RR  LVK     AE+++
Sbjct: 68  VISPWDKSMLSEIEKAIQKSDLGLNPANDGNVIRLTIPALTEQRRQELVKQVRKMAEEAR 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRDG + +KK  K+G  SED V  L + +Q++TD  I  +D   E+K+K++   
Sbjct: 128 VAIRNIRRDGNEEIKKLEKAGDLSEDDVRRLMDRVQQLTDKAIAQVDRLLEDKEKDVTQV 187


>gi|254462306|ref|ZP_05075722.1| ribosome recycling factor [Rhodobacterales bacterium HTCC2083]
 gi|206678895|gb|EDZ43382.1| ribosome recycling factor [Rhodobacteraceae bacterium HTCC2083]
          Length = 187

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 87/182 (47%), Positives = 124/182 (68%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  ++  RM   ++ LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EP
Sbjct: 6   MLDTDDLHRRMDGAMANLKTEFASLRTGRASGSMLEPVMVDAYGSMTPINQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y E
Sbjct: 66  RMVTINVWDKGLVQKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAAQYTE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++SVRN+RRDGMD +KK++  G  SED     E ++Q++TD+ IK +D+  E K+KEI
Sbjct: 126 SARVSVRNVRRDGMDQIKKAKNDG-LSEDDQKFWEAEVQELTDAAIKAVDAALEVKQKEI 184

Query: 184 MH 185
           M 
Sbjct: 185 MQ 186


>gi|218288327|ref|ZP_03492626.1| ribosome recycling factor [Alicyclobacillus acidocaldarius LAA1]
 gi|218241686|gb|EED08859.1| ribosome recycling factor [Alicyclobacillus acidocaldarius LAA1]
          Length = 187

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 126/180 (70%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +QN+++RM   I  L+++  T+R GR +PSMLD V VE YG+ +P+NQVA+VT  EPR+L
Sbjct: 8   IQNLQERMDKAIQNLRREFATVRAGRAAPSMLDHVMVEYYGAQMPVNQVASVTSPEPRLL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S WDK M++ +E+ I +S+LGLNP  +G V+R+ +P  TE+RR  LVK     AE+++
Sbjct: 68  VISPWDKSMLSEIEKAIQKSDLGLNPANDGNVIRLTIPALTEQRRQELVKQVRKMAEEAR 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRDG + +KK  K+G  SED V  L + +Q++TD  I  +D   E+K+K++   
Sbjct: 128 VAIRNIRRDGNEEIKKLEKAGDISEDDVRRLMDRVQQLTDKAIAQVDRLLEDKEKDVTQV 187


>gi|312114736|ref|YP_004012332.1| ribosome recycling factor [Rhodomicrobium vannielii ATCC 17100]
 gi|311219865|gb|ADP71233.1| ribosome recycling factor [Rhodomicrobium vannielii ATCC 17100]
          Length = 188

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/182 (46%), Positives = 122/182 (67%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVE-AYGSHVPLNQVANVTVLEP 63
            D++ I+ RM  +++ LK +   LRTGR S ++LD + V+ +YG+ +P+ QVA V   EP
Sbjct: 6   FDIKEIEKRMKSSVASLKSEFGGLRTGRASATLLDPIMVQTSYGAKMPIQQVAAVNAPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R++ V VWDK  +  VE+ I ES+LGLNP+++G  LR+P+PE  +ERR  LVK+A  YAE
Sbjct: 66  RLITVQVWDKSNLHGVEKAIRESSLGLNPVIDGLTLRLPIPELNQERRQELVKIAKKYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            ++++VRN+R+DGMD +KK  K GK SED        +Q +TD TIK ID+    K+ EI
Sbjct: 126 ATRVAVRNVRKDGMDQIKKLEKDGKISEDESGKTSTKVQDLTDKTIKEIDALLATKEHEI 185

Query: 184 MH 185
           M 
Sbjct: 186 MQ 187


>gi|83942310|ref|ZP_00954771.1| ribosome recycling factor [Sulfitobacter sp. EE-36]
 gi|83846403|gb|EAP84279.1| ribosome recycling factor [Sulfitobacter sp. EE-36]
          Length = 187

 Score =  178 bits (452), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 85/182 (46%), Positives = 121/182 (66%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +++ RM   I+ L+ +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EP
Sbjct: 6   MLDTDDLERRMNGAIASLRTEFASLRTGRASASMLEPVMVDAYGSSTPINQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 66  RMVTINVWDKALVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTQLTKVAGQYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++S+RN+RRDGMD +KK++  G  SED     E ++Q +T+  I  ID   E K+ EI
Sbjct: 126 SARVSIRNVRRDGMDQIKKAKADG-MSEDDQKVWEGEVQDMTNKFIAQIDEQLESKQAEI 184

Query: 184 MH 185
           M 
Sbjct: 185 MQ 186


>gi|163747132|ref|ZP_02154488.1| ribosome recycling factor [Oceanibulbus indolifex HEL-45]
 gi|161379693|gb|EDQ04106.1| ribosome recycling factor [Oceanibulbus indolifex HEL-45]
          Length = 188

 Score =  178 bits (452), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 86/182 (47%), Positives = 120/182 (65%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +++ RM   I+ L+ +  +LRTGR S SML+ V VEAYG   P+NQV  V V EP
Sbjct: 6   MLDTDDLERRMNGAIASLRTEFASLRTGRGSASMLEPVMVEAYGQMTPVNQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 66  RMVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTQLTKVAGQYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++S+RNIRRDGMD +KK++  G  SED     E ++Q +T+  I  ID   E K+ EI
Sbjct: 126 HARVSIRNIRRDGMDQIKKAKNDGAMSEDDQKIWEGEVQDLTNRFITLIDDQLETKQAEI 185

Query: 184 MH 185
           M 
Sbjct: 186 MQ 187


>gi|225181371|ref|ZP_03734815.1| ribosome recycling factor [Dethiobacter alkaliphilus AHT 1]
 gi|225167952|gb|EEG76759.1| ribosome recycling factor [Dethiobacter alkaliphilus AHT 1]
          Length = 185

 Score =  178 bits (452), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 84/177 (47%), Positives = 123/177 (69%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + ++RM   +S LK+D+ TLR GR +PS+LD + V+ YGS +P+NQ+ANV+  EPR+LV+
Sbjct: 8   DAQERMEKAVSALKRDLATLRAGRATPSLLDKIVVDYYGSSMPINQLANVSTPEPRLLVI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WDK  VA VER I +S+LGL P+ +G ++R+ +P+ TEERR  LVKV+   AE  ++S
Sbjct: 68  QPWDKNAVAEVERAILKSDLGLTPVSDGSIIRLAIPQLTEERRKELVKVSKKKAEDGRVS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD  + LK+  K  + +ED +   ++DIQK+TD  I   DS  + K+KEIM 
Sbjct: 128 IRNIRRDANEDLKRLEKDNEITEDELHKAQDDIQKLTDKFIAEADSVLDAKEKEIME 184


>gi|84686917|ref|ZP_01014801.1| ribosome recycling factor [Maritimibacter alkaliphilus HTCC2654]
 gi|84665114|gb|EAQ11594.1| ribosome recycling factor [Rhodobacterales bacterium HTCC2654]
          Length = 188

 Score =  178 bits (451), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 83/182 (45%), Positives = 124/182 (68%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID+ +++ RM   I  L+ ++ +LRTGR S +ML+ V VEAYG   P+NQV  V V EPR
Sbjct: 8   IDIDDLERRMEGAIGALRTELASLRTGRASAAMLEPVHVEAYGQRTPINQVGTVNVPEPR 67

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V +VE+ I ES LG+NP   G ++ +P+PE  EERR  L +VA  YAE 
Sbjct: 68  MVTINVWDKSLVNAVEKAIMESGLGINPQTNGTIIMLPIPELNEERRKELARVAAQYAES 127

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGM+ LKK++ +G  SED      +++Q++TD  I N+D   E K++EIM
Sbjct: 128 ARVAIRNVRRDGMEQLKKAKAAG-MSEDDNKIWHDEVQELTDKYIGNVDKTLETKQEEIM 186

Query: 185 HF 186
             
Sbjct: 187 QV 188


>gi|149202144|ref|ZP_01879117.1| ribosome recycling factor [Roseovarius sp. TM1035]
 gi|149144242|gb|EDM32273.1| ribosome recycling factor [Roseovarius sp. TM1035]
          Length = 187

 Score =  178 bits (451), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 86/181 (47%), Positives = 121/181 (66%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  +++ RM   I  LK +  +LRTGR S SML+ + V+AYG   P+NQV  V V EPR
Sbjct: 7   IDTGDLERRMEGAIGALKTEFASLRTGRASASMLEPIMVDAYGQKTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  E+RR  L KVA  YAE 
Sbjct: 67  MVTVNVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEQRRKELTKVAAQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMD +KK++  G  SED     E+++Q +TD  IK++D   E K+ EIM
Sbjct: 127 ARVAVRNVRRDGMDQIKKAKGDG-MSEDDQKFWESEVQSLTDRFIKHVDELLEGKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|86138423|ref|ZP_01056997.1| ribosome recycling factor [Roseobacter sp. MED193]
 gi|85824948|gb|EAQ45149.1| ribosome recycling factor [Roseobacter sp. MED193]
          Length = 187

 Score =  178 bits (451), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 86/181 (47%), Positives = 122/181 (67%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ LK +  +LRTGR S +ML+ V VEAYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMANLKTEFASLRTGRASGAMLEPVMVEAYGSMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I  S LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVGPVEKAIRNSGLGINPQLNGTIIMLPIPELNEERRRELGKVAGQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRDGMD +KK++  G  SED     E+++Q +TD+ IK++D   E K+ EIM
Sbjct: 127 CRVSIRNVRRDGMDQIKKAKSDG-MSEDDQKFWESEVQDLTDAMIKSVDDALEHKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|254464577|ref|ZP_05077988.1| ribosome recycling factor [Rhodobacterales bacterium Y4I]
 gi|206685485|gb|EDZ45967.1| ribosome recycling factor [Rhodobacterales bacterium Y4I]
          Length = 187

 Score =  177 bits (450), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 86/181 (47%), Positives = 123/181 (67%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ L+ +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMANLRTEFASLRTGRASASMLEPVMVDAYGSMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAGHYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN+RRDGMD +KK++  G  SED     E ++Q++TD  IK++D   E K+ EIM
Sbjct: 127 ARVSIRNVRRDGMDQIKKAKADG-MSEDDQKFWEAEVQELTDKMIKHVDEALETKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|315499832|ref|YP_004088635.1| ribosome recycling factor [Asticcacaulis excentricus CB 48]
 gi|315417844|gb|ADU14484.1| ribosome recycling factor [Asticcacaulis excentricus CB 48]
          Length = 185

 Score =  177 bits (449), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 86/180 (47%), Positives = 117/180 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL   KDRM  +++ LK D   LRTGR S  +L+ + V+AYGS + +   A ++V EPRM
Sbjct: 5   DLNKYKDRMDKSVTALKDDFGGLRTGRASAGLLEGITVDAYGSAMSILSCAAISVPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V+VWDK +V SVE+ I  S LGLNP+ +GQ LR+P+P  TEERR  L K+A  YAE+ 
Sbjct: 65  ISVNVWDKGLVVSVEKAIRNSGLGLNPVTDGQTLRVPIPPLTEERRKELAKIAGKYAEEK 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++VRN+RRD  D LKK+ K    SED    +  ++QK TD  IK ID   + K+ EIM 
Sbjct: 125 RVAVRNVRRDANDELKKAEKDSLISEDEQKKMTTEVQKFTDEAIKRIDEMLKVKEAEIMQ 184


>gi|326388633|ref|ZP_08210226.1| ribosome recycling factor [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326206884|gb|EGD57708.1| ribosome recycling factor [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 185

 Score =  177 bits (449), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 85/179 (47%), Positives = 118/179 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  +++ RM   +  L+ D+  LRTGR + ++LD + VE YGS +PLNQVA V+  EPR+
Sbjct: 5   DKADLERRMKGAVDALRHDLSGLRTGRANTALLDPITVEIYGSRMPLNQVATVSAPEPRL 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWDK  +  VE+ I  + LGLNPI +G  LR+P+P+ TEERR  L K+A  YAEK+
Sbjct: 65  LSVQVWDKSSIGPVEKAIRSAGLGLNPINDGNTLRLPIPDLTEERRKELAKLASQYAEKA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +I++RN+RRDGM+ LK      + SED     E ++QK+TD  IK  D    EK+KEI+
Sbjct: 125 RIAIRNVRRDGMEALKADEAKKEISEDERKRAETEVQKLTDEIIKAADEAASEKEKEIL 183


>gi|254488037|ref|ZP_05101242.1| ribosome recycling factor [Roseobacter sp. GAI101]
 gi|214044906|gb|EEB85544.1| ribosome recycling factor [Roseobacter sp. GAI101]
          Length = 187

 Score =  177 bits (448), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 85/182 (46%), Positives = 122/182 (67%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +++ RM   I+ L+ +  +LRTGR S SMLD + V+AYG+  P+NQV  V V EP
Sbjct: 6   MLDTDDLERRMDGAIASLRTEFASLRTGRGSASMLDPIMVDAYGTKTPINQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR +L KVA  YAE
Sbjct: 66  RMVTINVWDKSLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTSLTKVAGQYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++S+RNIRRDGMD +KK++  G  SED     E ++Q +T+  I  ID   E K+ EI
Sbjct: 126 HARVSIRNIRRDGMDQIKKAKADG-MSEDDQKVWEGEVQDMTNKYIAMIDEQLETKQAEI 184

Query: 184 MH 185
           M 
Sbjct: 185 MQ 186


>gi|296536126|ref|ZP_06898255.1| ribosome recycling factor [Roseomonas cervicalis ATCC 49957]
 gi|296263538|gb|EFH10034.1| ribosome recycling factor [Roseomonas cervicalis ATCC 49957]
          Length = 190

 Score =  176 bits (446), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 82/176 (46%), Positives = 118/176 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q++  RM   +  LKK+   LRTGR SP++L+ ++VE YG++ PL+QVANV+V  P +L 
Sbjct: 12  QDLTRRMDGALEVLKKEFSGLRTGRASPALLEPIRVEVYGANQPLSQVANVSVGGPGLLS 71

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWD+    +VE  I +S LGLNP  EGQ +R+P+P  T+ERR  L K AH YAE +K+
Sbjct: 72  VQVWDRSAAKAVEIAIRDSGLGLNPQTEGQTIRVPLPPLTQERRNELAKQAHKYAEAAKV 131

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +VR +RRDGM+ +K   K  +  +D  A   +++QK+TD TIK +D    EK+K+I
Sbjct: 132 AVRGVRRDGMESIKGWEKKSEIGKDDAAKWSDEVQKLTDQTIKKVDELLAEKEKDI 187


>gi|85703599|ref|ZP_01034703.1| ribosome recycling factor [Roseovarius sp. 217]
 gi|85672527|gb|EAQ27384.1| ribosome recycling factor [Roseovarius sp. 217]
          Length = 187

 Score =  176 bits (445), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/181 (46%), Positives = 121/181 (66%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  +++ RM   +S LK +  +LRTGR S SML+ + V+AYG   P+NQV  V V EPR
Sbjct: 7   IDTGDLERRMEGAMSALKTEFASLRTGRASASMLEPIMVDAYGQKTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  E+RR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEQRRKELTKVAAQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMD +KK++  G  SED     E ++Q +TD  IK++D   + K+ EIM
Sbjct: 127 ARVAVRNVRRDGMDQIKKAKADG-MSEDDQKFWEGEVQSLTDRFIKHVDEVLDGKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|89068188|ref|ZP_01155598.1| ribosome recycling factor [Oceanicola granulosus HTCC2516]
 gi|89046105|gb|EAR52163.1| ribosome recycling factor [Oceanicola granulosus HTCC2516]
          Length = 186

 Score =  176 bits (445), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/182 (46%), Positives = 124/182 (68%), Gaps = 2/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +++ RM  T++ L+ +  +LRTGR S SML+ V+VEAYG   P+NQV  V V EP
Sbjct: 6   ILDTDDLQRRMDGTMNNLRTEFASLRTGRASASMLEPVQVEAYGQMTPINQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 66  RMVTINVWDKGLVNKVEKAIRESGLGINPQMNGTIIMLPIPELNEERRRELTKVAGQYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++S+RN+RRDGMD +KK+  +   +ED     E ++Q++TD  IK++D   E K+ EI
Sbjct: 126 HARVSIRNVRRDGMDQIKKA--ADGMAEDDRKLWEAEVQEMTDKYIKSVDDALEHKQAEI 183

Query: 184 MH 185
           M 
Sbjct: 184 MQ 185


>gi|255263510|ref|ZP_05342852.1| ribosome recycling factor [Thalassiobium sp. R2A62]
 gi|255105845|gb|EET48519.1| ribosome recycling factor [Thalassiobium sp. R2A62]
          Length = 187

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/181 (46%), Positives = 122/181 (67%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  ++  RM   ++ L+ +  +LRTGR S SML+ V V+AYG+  P+NQV  V V EPR
Sbjct: 7   IDTDDLTRRMDGAMANLRTEFASLRTGRASGSMLEPVMVDAYGTMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA +YAE 
Sbjct: 67  MVTINVWDKGLVNKVEKAIRESGLGINPQMNGTIIMLPIPELNEERRRELTKVAASYAEN 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++SVRN+RRDGM  +KK + +G   +D     E ++Q++TDS IK +D   E K++EIM
Sbjct: 127 ARVSVRNVRRDGMVQIKKGKAAGMPEDDQ-KLWETEVQELTDSFIKQVDGALETKQEEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|190360297|sp|Q0BTL9|RRF_GRABC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 188

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 80/176 (45%), Positives = 118/176 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q++  RM   +  L+++   LR GR SP++L+ V+V+AYGS VPL QV N+ V E RML 
Sbjct: 10  QDLTRRMDGALETLRREFAGLRAGRASPALLEPVRVDAYGSEVPLTQVGNIGVPESRMLT 69

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWD+ +V++VE+ I +  LGLNP  EGQ++R+P+P  TEERR  L K A  YAE +++
Sbjct: 70  VQVWDRSLVSAVEKAIRDCGLGLNPQTEGQLIRVPLPMLTEERRNELAKAAGRYAESTRV 129

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++R +RRDGMD +K   K  +  ED   +  +++QK+TD  IK +D    EK+K+I
Sbjct: 130 AIRAVRRDGMDQIKGHEKKSEIGEDEAKTWSDEVQKLTDHYIKRVDDALVEKEKDI 185


>gi|85708126|ref|ZP_01039192.1| ribosome recycling factor [Erythrobacter sp. NAP1]
 gi|85689660|gb|EAQ29663.1| ribosome recycling factor [Erythrobacter sp. NAP1]
          Length = 185

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/179 (47%), Positives = 122/179 (68%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  + + RM   +  LK D+  LRTGR + S+LD V VE YGS +PL  VA V   EPRM
Sbjct: 5   DKADTERRMNGAVESLKGDLSGLRTGRANTSLLDPVVVEVYGSMMPLASVATVNTPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V VWDK  V++VE+GI ++NLGLNP+ +GQ +R+P+P+ TEERR  L K+A  YAEK+
Sbjct: 65  ISVQVWDKSNVSAVEKGITKANLGLNPMTDGQTIRLPMPDLTEERRKELAKLAGQYAEKA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KI++RN+RRD M+ LK   K  + SED    +E+++QK+TD  + + D    +K++EI+
Sbjct: 125 KIAIRNVRRDAMESLKTDEKKKEISEDDRKRMEDEVQKLTDKYVADTDEAAAKKEQEIL 183


>gi|15892120|ref|NP_359834.1| ribosome recycling factor [Rickettsia conorii str. Malish 7]
 gi|20139894|sp|Q92J72|RRF_RICCN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|15619247|gb|AAL02735.1| ribosome recycling factor [Rickettsia conorii str. Malish 7]
          Length = 186

 Score =  175 bits (444), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 124/177 (70%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR ALVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRTALVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM
Sbjct: 128 SLRNIRRDGNEALKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIM 184


>gi|114327599|ref|YP_744756.1| ribosome recycling factor [Granulibacter bethesdensis CGDNIH1]
 gi|114315773|gb|ABI61833.1| ribosome recycling factor (RRF) [Granulibacter bethesdensis
           CGDNIH1]
          Length = 202

 Score =  175 bits (444), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 80/176 (45%), Positives = 118/176 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q++  RM   +  L+++   LR GR SP++L+ V+V+AYGS VPL QV N+ V E RML 
Sbjct: 24  QDLTRRMDGALETLRREFAGLRAGRASPALLEPVRVDAYGSEVPLTQVGNIGVPESRMLT 83

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWD+ +V++VE+ I +  LGLNP  EGQ++R+P+P  TEERR  L K A  YAE +++
Sbjct: 84  VQVWDRSLVSAVEKAIRDCGLGLNPQTEGQLIRVPLPMLTEERRNELAKAAGRYAESTRV 143

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++R +RRDGMD +K   K  +  ED   +  +++QK+TD  IK +D    EK+K+I
Sbjct: 144 AIRAVRRDGMDQIKGHEKKSEIGEDEAKTWSDEVQKLTDHYIKRVDDALVEKEKDI 199


>gi|89054949|ref|YP_510400.1| ribosome recycling factor [Jannaschia sp. CCS1]
 gi|88864498|gb|ABD55375.1| ribosome recycling factor [Jannaschia sp. CCS1]
          Length = 243

 Score =  175 bits (443), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 85/182 (46%), Positives = 122/182 (67%), Gaps = 4/182 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +++ RM   I+ L+ +  +LRTGR S SML+ V V+AYG+  P+NQV  V V EP
Sbjct: 65  MLDTDDLERRMEGAIASLRTEFASLRTGRASASMLEPVMVDAYGAMTPINQVGTVNVPEP 124

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 125 RMVTVNVWDKGLVNKVEKAIRESGLGINPQMNGTIIMLPIPELNEERRRELTKVAGTYAE 184

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            ++++VRN+RRDGMD +KK+      SED     E  +Q++TD+ IK +D   E K++EI
Sbjct: 185 NARVAVRNVRRDGMDQIKKA----DTSEDDAKFWEGAVQELTDTFIKRVDDQLETKQEEI 240

Query: 184 MH 185
           M 
Sbjct: 241 MQ 242


>gi|190360293|sp|Q28PI7|RRF_JANSC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 184

 Score =  175 bits (443), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 85/182 (46%), Positives = 122/182 (67%), Gaps = 4/182 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +++ RM   I+ L+ +  +LRTGR S SML+ V V+AYG+  P+NQV  V V EP
Sbjct: 6   MLDTDDLERRMEGAIASLRTEFASLRTGRASASMLEPVMVDAYGAMTPINQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 66  RMVTVNVWDKGLVNKVEKAIRESGLGINPQMNGTIIMLPIPELNEERRRELTKVAGTYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            ++++VRN+RRDGMD +KK+      SED     E  +Q++TD+ IK +D   E K++EI
Sbjct: 126 NARVAVRNVRRDGMDQIKKA----DTSEDDAKFWEGAVQELTDTFIKRVDDQLETKQEEI 181

Query: 184 MH 185
           M 
Sbjct: 182 MQ 183


>gi|126729706|ref|ZP_01745519.1| ribosome recycling factor [Sagittula stellata E-37]
 gi|126709825|gb|EBA08878.1| ribosome recycling factor [Sagittula stellata E-37]
          Length = 186

 Score =  174 bits (442), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 84/181 (46%), Positives = 121/181 (66%), Gaps = 2/181 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++  RM   +  L+ +  +LRTGR S SML+ + V+AYG+  P+NQV  V V EPR
Sbjct: 7   LDTDDLTRRMEGAMGSLRTEFASLRTGRASGSMLEPIMVDAYGAMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKSLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELSKVAGQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RNIRRDGMD +KK +     SED     E+++Q +TDS IK +D+  E K++EIM
Sbjct: 127 ARVSIRNIRRDGMDQIKKHKDD--MSEDDAKLWESEVQDLTDSYIKKVDAALETKQEEIM 184

Query: 185 H 185
            
Sbjct: 185 Q 185


>gi|34580849|ref|ZP_00142329.1| ribosome recycling factor [Rickettsia sibirica 246]
 gi|28262234|gb|EAA25738.1| ribosome recycling factor [Rickettsia sibirica 246]
          Length = 186

 Score =  174 bits (442), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 123/177 (69%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRTELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++KK+EIM
Sbjct: 128 SLRNIRRDGNEALKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKKQEIM 184


>gi|126736320|ref|ZP_01752062.1| ribosome recycling factor [Roseobacter sp. CCS2]
 gi|126714141|gb|EBA11010.1| ribosome recycling factor [Roseobacter sp. CCS2]
          Length = 187

 Score =  174 bits (442), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 85/181 (46%), Positives = 122/181 (67%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++  RM   I+ L+ ++ +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLTRRMEGAIANLRVELASLRTGRASGSMLEPVMVDAYGSMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y E 
Sbjct: 67  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAGQYGES 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN+RRDGMD +KK++  G  SED     E+ +Q++TD+ IK +D   E K+ EIM
Sbjct: 127 ARVSIRNLRRDGMDKIKKAKTDG-LSEDDQKFWESTVQEVTDAHIKIVDETIESKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|84516072|ref|ZP_01003432.1| ribosome recycling factor [Loktanella vestfoldensis SKA53]
 gi|84509768|gb|EAQ06225.1| ribosome recycling factor [Loktanella vestfoldensis SKA53]
          Length = 187

 Score =  174 bits (441), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 84/181 (46%), Positives = 122/181 (67%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++  RM   I+ L+ ++ +LRTGR S SML+ + V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLARRMDGAIANLRVELASLRTGRASGSMLEPIMVDAYGSPTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I +S LG+NP + G ++ +P+PE  EERR  L KVA  YAE+
Sbjct: 67  MVTINVWDKALVGKVEKAIRDSGLGINPQLNGTIIMLPIPELNEERRRELTKVAGNYAEQ 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN+RRDGMD +KK++  G  SED     E  +Q+ITD+  K +D   E K+ EIM
Sbjct: 127 ARVSIRNLRRDGMDQIKKAKSDG-LSEDDQKFWETTVQEITDAHTKLVDETLETKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|310816031|ref|YP_003963995.1| ribosome recycling factor [Ketogulonicigenium vulgare Y25]
 gi|308754766|gb|ADO42695.1| ribosome recycling factor [Ketogulonicigenium vulgare Y25]
          Length = 187

 Score =  174 bits (440), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 82/181 (45%), Positives = 122/181 (67%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++  RM   I+ L+ +  +LRTGR S SML+ + V+AYG   P+NQ+  + V EPR
Sbjct: 7   LDTDDLTRRMDGAIAALRTEFASLRTGRASGSMLEPIVVDAYGQTTPINQLGTINVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK MV+ VE+ I +S LG+NP   G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGMVSKVEKAIRDSGLGINPQTNGTIIMLPIPELNEERRRELTKVAAGYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMD +KK++  G  SED V   E+++Q++TD  IK +D   + K+ EIM
Sbjct: 127 ARVAVRNLRRDGMDKIKKAKSDG-LSEDDVKFWESEVQELTDKFIKLVDQTLDTKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|159044043|ref|YP_001532837.1| ribosome recycling factor [Dinoroseobacter shibae DFL 12]
 gi|190360241|sp|A8LK37|RRF_DINSH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157911803|gb|ABV93236.1| ribosome recycling factor [Dinoroseobacter shibae DFL 12]
          Length = 188

 Score =  173 bits (439), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 83/175 (47%), Positives = 116/175 (66%), Gaps = 1/175 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM   ++ L+ +  +LRTGR S SML+ V V+AYG   P+NQV  V V EPRM+ ++V
Sbjct: 14  KRRMDGALASLRTEFASLRTGRASASMLEPVMVDAYGQKTPINQVGTVNVPEPRMVTINV 73

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE +++++R
Sbjct: 74  WDKSLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAAQYAEHARVAIR 133

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+RRDGMD LKK +  G  SED      +++Q +TD+ IK +D   E K+ EIM 
Sbjct: 134 NVRRDGMDQLKKFKADG-MSEDDHKIWSDEVQALTDAEIKKVDDALENKQSEIMQ 187


>gi|304320071|ref|YP_003853714.1| putative ribosome recycling factor [Parvularcula bermudensis
           HTCC2503]
 gi|303298974|gb|ADM08573.1| putative ribosome recycling factor [Parvularcula bermudensis
           HTCC2503]
          Length = 183

 Score =  173 bits (438), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 84/181 (46%), Positives = 120/181 (66%), Gaps = 3/181 (1%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D++ ++ RM   I+ LK +   LR+GR + S+LD V V AYGS +PLNQV  V V + R 
Sbjct: 6   DMKELEKRMDGAIASLKSEYAGLRSGRATISLLDPVTVNAYGSEMPLNQVGTVGVPDART 65

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWDK +V++VE+GI ES L LNP+ +GQ +R+P+P  TEERR  L K+   YAE +
Sbjct: 66  LSVQVWDKGLVSAVEKGIRESGLDLNPVTDGQTVRVPMPPMTEERRRDLAKLTGKYAEAA 125

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++RN+RRDGM+  KK+      SED    +  ++QK+TD+ +K ID    +K+KEIM 
Sbjct: 126 KVAIRNVRRDGMEEAKKAE---GVSEDDQKRMSEEVQKLTDAKVKEIDQMHAQKEKEIMQ 182

Query: 186 F 186
            
Sbjct: 183 V 183


>gi|238650359|ref|YP_002916211.1| ribosome recycling factor [Rickettsia peacockii str. Rustic]
 gi|259494554|sp|C4K0R2|RRF_RICPU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238624457|gb|ACR47163.1| ribosome recycling factor [Rickettsia peacockii str. Rustic]
          Length = 186

 Score =  173 bits (438), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/177 (48%), Positives = 123/177 (69%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRTELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM
Sbjct: 128 SLRNIRRDGNEALKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIM 184


>gi|67459519|ref|YP_247143.1| ribosome recycling factor [Rickettsia felis URRWXCal2]
 gi|75536074|sp|Q4UKF3|RRF_RICFE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|67005052|gb|AAY61978.1| Ribosome recycling factor [Rickettsia felis URRWXCal2]
          Length = 186

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/177 (48%), Positives = 123/177 (69%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMDKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRKELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM
Sbjct: 128 SLRNIRRDGNEELKKLEKDNIIAKDEHHSLSEQVQKLTDDYSSKVDSAIKQKEQEIM 184


>gi|330814009|ref|YP_004358248.1| ribosome recycling factor [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487104|gb|AEA81509.1| ribosome recycling factor [Candidatus Pelagibacter sp. IMCC9063]
          Length = 173

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 84/171 (49%), Positives = 119/171 (69%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M +TI  L +D+ T+RTGR   SMLDL+KVE YG  +P+NQVA ++  E ++L V VWD 
Sbjct: 1   MQNTIQSLTQDLSTIRTGRAHVSMLDLIKVEVYGQKMPINQVATISTPESQLLTVQVWDA 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             V  V++ + ES+L +NP V+GQ++R+PVP+ +EERRL L+K+    +EK KIS+RNIR
Sbjct: 61  ANVKFVDKALRESDLNINPTVDGQIVRVPVPKLSEERRLDLIKIVKNQSEKIKISIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R+GMD LK   K+   SED  A L N++Q+ITD  I  +D    EK++EI+
Sbjct: 121 REGMDLLKNLLKNKDISEDDNAKLSNELQQITDKFINEVDKKISEKEQEII 171


>gi|117925140|ref|YP_865757.1| ribosome recycling factor [Magnetococcus sp. MC-1]
 gi|166230797|sp|A0L8Q8|RRF_MAGSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|117608896|gb|ABK44351.1| ribosome recycling factor [Magnetococcus sp. MC-1]
          Length = 185

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 84/180 (46%), Positives = 128/180 (71%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++++ RM  +++ LK ++ T+RTGR S S+LD V V AYGS +PLNQVA++TV E RM+
Sbjct: 6   IKDLEQRMNKSLAALKDELATVRTGRASTSLLDAVMVNAYGSMMPLNQVASMTVPEARMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  WDK  + ++E+ I +++LGLNP  +GQ++R+P+PE TEERR  LVK+ H Y+E  K
Sbjct: 66  NVQPWDKGQLGAIEKAIRDADLGLNPSNDGQIVRVPLPELTEERRKDLVKLVHKYSEACK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRDG++ L+K+ K+ + S+D + + E  +Q+ TD  IK ID     K+ +IM  
Sbjct: 126 IAVRNIRRDGIEGLRKAEKNKEISQDEMHTQEKLVQESTDKFIKLIDEAIVSKEADIMQV 185


>gi|332976811|gb|EGK13639.1| ribosome recycling factor [Desmospora sp. 8437]
          Length = 185

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 84/174 (48%), Positives = 116/174 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   I  LK+++ ++R GR +PS+LD V VE YGS +PLNQ+AN++  EPR+LVV  WD
Sbjct: 12  RMEKAIQALKRELASIRAGRATPSLLDKVTVECYGSEMPLNQLANISTPEPRLLVVQPWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  +  VER I +S+LGL P  +G ++RI +P  TEERR  LVKV     E++K+++RNI
Sbjct: 72  KSTLGDVERAILKSDLGLTPNNDGNLIRITIPALTEERRGELVKVVKKTGEEAKVAIRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +KK  K G+ SED     +++IQK+TD  I+  D   E K+KEIM  
Sbjct: 132 RRDANDEMKKLEKKGELSEDEARRGQDEIQKLTDRFIQETDKVVETKEKEIMEV 185


>gi|229586395|ref|YP_002844896.1| ribosome recycling factor [Rickettsia africae ESF-5]
 gi|259494553|sp|C3PMJ3|RRF_RICAE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|228021445|gb|ACP53153.1| Ribosome recycling factor [Rickettsia africae ESF-5]
          Length = 186

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/177 (48%), Positives = 123/177 (69%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRTELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM
Sbjct: 128 SLRNIRRDGNEALKKLAKDNVIAKDEHHSLSEQVQKLTDDYSNKVDSVIKQKEQEIM 184


>gi|293374703|ref|ZP_06621011.1| ribosome recycling factor [Turicibacter sanguinis PC909]
 gi|325840609|ref|ZP_08167090.1| ribosome recycling factor [Turicibacter sp. HGF1]
 gi|292646617|gb|EFF64619.1| ribosome recycling factor [Turicibacter sanguinis PC909]
 gi|325490258|gb|EGC92591.1| ribosome recycling factor [Turicibacter sp. HGF1]
          Length = 185

 Score =  172 bits (437), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/180 (46%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N + RM   I  LK++   LRTGR S ++LD ++V+ YG   P+NQ+A VTV EPR L
Sbjct: 6   LSNAEARMSKAIDSLKREFSVLRTGRASGALLDNIQVDYYGMPSPINQMAQVTVPEPRQL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +DK M+ ++ER I+E+N+GL P  +G+V+R+ VP  TEERR  L K    +AE +K
Sbjct: 66  VVKPYDKSMLQAIERAINEANIGLTPNNDGEVIRLNVPALTEERRRELAKKVKGFAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRD  D LKK +K+G+ +ED +     D+QK+TD  IK +D+  +EK+K+IM  
Sbjct: 126 VAIRNVRRDANDELKKLQKNGEITEDALKGYTEDVQKLTDKKIKEVDATADEKEKDIMSI 185


>gi|83951884|ref|ZP_00960616.1| ribosome recycling factor [Roseovarius nubinhibens ISM]
 gi|83836890|gb|EAP76187.1| ribosome recycling factor [Roseovarius nubinhibens ISM]
          Length = 187

 Score =  172 bits (436), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 82/181 (45%), Positives = 119/181 (65%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++  ++  RM   ++ L+ +  +LRTGR S SML+ V V+AYG   P+NQV  V V EPR
Sbjct: 7   LNTDDLTRRMDGAMASLRTEFASLRTGRASASMLEPVMVDAYGQQTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVNKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVASQYAES 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++  G  SED     E  +Q++TDS I  +D   E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKAKADG-MSEDDQKFWETSVQELTDSFIAKVDEALEHKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|239948540|ref|ZP_04700293.1| ribosome recycling factor [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922816|gb|EER22840.1| ribosome recycling factor [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 202

 Score =  172 bits (436), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/177 (48%), Positives = 123/177 (69%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 24  KNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 83

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 84  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRKELVKLAHKYGEDTKI 143

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM
Sbjct: 144 SLRNIRRDGNEELKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIM 200


>gi|332298055|ref|YP_004439977.1| Ribosome-recycling factor [Treponema brennaborense DSM 12168]
 gi|332181158|gb|AEE16846.1| Ribosome-recycling factor [Treponema brennaborense DSM 12168]
          Length = 183

 Score =  172 bits (436), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 83/173 (47%), Positives = 119/173 (68%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  TI+ LK D  TLRTGR S ++ D V+V+ YG+  PLNQV+ ++V E R +V+  +D
Sbjct: 10  RMEKTIAALKDDFKTLRTGRASAAIFDKVRVDYYGTPTPLNQVSTISVPEARSIVIQPFD 69

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  +E+ I +S LGLNP  +G+V+RI +P  T +RR  LVK A A AE S++++RNI
Sbjct: 70  KSLIGEIEKAIQKSELGLNPSNDGKVIRIAIPPLTADRRKELVKQAKATAENSRVAIRNI 129

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRDG D LKK +K G  +ED + + E ++QK TD  I++I+   EEK+KEIM 
Sbjct: 130 RRDGNDDLKKQQKDGSLTEDGLKTAETELQKSTDKFIQDINKILEEKEKEIME 182


>gi|254439528|ref|ZP_05053022.1| ribosome recycling factor [Octadecabacter antarcticus 307]
 gi|198254974|gb|EDY79288.1| ribosome recycling factor [Octadecabacter antarcticus 307]
          Length = 187

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/182 (46%), Positives = 119/182 (65%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  ++  RM   I+ L+ +  +LRTGR S S+L+ + V+AYGS  P+NQV  V V E 
Sbjct: 6   ILDTDDLTRRMDGAIANLRVEFASLRTGRASASILEPIMVDAYGSQTPINQVGTVNVPES 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 66  RMVTVNVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTQLTKVAGTYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
             ++S+RN+RRDGMD +KK++  G  SED     E ++Q +T+  IK ID   E K+ EI
Sbjct: 126 NGRVSIRNLRRDGMDQIKKAKNDG-ISEDDQKFWEGEMQGLTNDYIKRIDDQLEIKQAEI 184

Query: 184 MH 185
           M 
Sbjct: 185 MQ 186


>gi|56964004|ref|YP_175735.1| ribosome recycling factor [Bacillus clausii KSM-K16]
 gi|60390232|sp|Q5WFT1|RRF_BACSK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56910247|dbj|BAD64774.1| ribosome recycling factor [Bacillus clausii KSM-K16]
          Length = 185

 Score =  172 bits (435), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/178 (47%), Positives = 124/178 (69%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + K RM   I  L +++  LR GR +P++LD V VE YG+  PLNQ+A+VTV E R+L++
Sbjct: 8   DAKTRMDKAIDVLSRELAKLRAGRANPALLDRVTVEYYGAQTPLNQLASVTVPEARLLLI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + +DK  VAS+E+ I +S+LGL P  +GQV+RI +P  TEERR  LV++    AE+SK++
Sbjct: 68  TPYDKTAVASIEKAILKSDLGLTPSNDGQVIRIAIPPLTEERRKDLVRLVSKTAEESKVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIRRD  D LKK +K G+ +ED + S  +DIQK+TD+ +  ID   ++K++EI+  
Sbjct: 128 VRNIRRDANDELKKLQKDGEMTEDELRSATDDIQKLTDTYVAKIDEKAKQKEQEIIEV 185


>gi|157964221|ref|YP_001499045.1| ribosome recycling factor [Rickettsia massiliae MTU5]
 gi|157843997|gb|ABV84498.1| Ribosome recycling factor [Rickettsia massiliae MTU5]
          Length = 188

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/177 (48%), Positives = 122/177 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++ +M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 10  KNLQGKMEKALKVLDHELKGLRTGRASINLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 69

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 70  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPTLTEERRQELVKLAHKYGEDTKI 129

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM
Sbjct: 130 SLRNIRRDGNEELKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIM 186


>gi|119386701|ref|YP_917756.1| ribosome recycling factor [Paracoccus denitrificans PD1222]
 gi|166230812|sp|A1B966|RRF_PARDP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119377296|gb|ABL72060.1| ribosome recycling factor [Paracoccus denitrificans PD1222]
          Length = 187

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 79/181 (43%), Positives = 120/181 (66%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  +++ RM   +  L+ +  +LRTGR S SM++ + V+AYGS  P+NQ+  V V EPR
Sbjct: 7   IDTDDLERRMKGAMESLRHEFASLRTGRASASMVEPIMVDAYGSPTPINQIGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ +++WDK +V   E+ I ES LG+NP + G ++ +P+PE  EERR  L +VA  YAE 
Sbjct: 67  MVTINIWDKGLVGKAEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTRVAAQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++ SG  SED     E  +Q++TD  I ++D   E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKAKSSG-MSEDDQKFWEGAVQELTDKMIASVDQALEAKQAEIM 185

Query: 185 H 185
            
Sbjct: 186 Q 186


>gi|154253632|ref|YP_001414456.1| ribosome recycling factor [Parvibaculum lavamentivorans DS-1]
 gi|190360245|sp|A7HY16|RRF_PARL1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|154157582|gb|ABS64799.1| ribosome recycling factor [Parvibaculum lavamentivorans DS-1]
          Length = 187

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 81/184 (44%), Positives = 118/184 (64%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           +   D+ + + RM   +  LK++   LRTGR + S+L+ + VEAYG  +P+NQV  + V 
Sbjct: 3   DTTFDIDDTERRMRGALQSLKQEFAGLRTGRATASLLEPIVVEAYGQSMPINQVGTIGVP 62

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPRML V VWDK M+++VE+ I  S LGLNP V+G ++R+P+PE  +ERR  L K+A  Y
Sbjct: 63  EPRMLTVQVWDKGMISAVEKAIRSSGLGLNPNVDGMLIRLPIPELNQERRAELTKIAAKY 122

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E+++I+VRN+RRD MD LK+  K    S+D   S    +QK+TD  I  ID+    K+ 
Sbjct: 123 TEQARIAVRNVRRDAMDELKRLEKDSHMSQDDHKSWSEKVQKLTDKVIGEIDAALAHKEA 182

Query: 182 EIMH 185
           +IM 
Sbjct: 183 DIMQ 186


>gi|190360295|sp|A8F0R2|RRF_RICM5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 186

 Score =  171 bits (434), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/177 (48%), Positives = 122/177 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++ +M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQGKMEKALKVLDHELKGLRTGRASINLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPTLTEERRQELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM
Sbjct: 128 SLRNIRRDGNEELKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIM 184


>gi|229918658|ref|YP_002887304.1| ribosome recycling factor [Exiguobacterium sp. AT1b]
 gi|229470087|gb|ACQ71859.1| ribosome recycling factor [Exiguobacterium sp. AT1b]
          Length = 186

 Score =  171 bits (434), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/179 (47%), Positives = 122/179 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M    S LK+D  TLRTGR S S+LD V+V+ YG   PLNQVAN+   E R+L
Sbjct: 7   LKTAEEKMEKAHSSLKRDFGTLRTGRASASILDPVQVDYYGVPTPLNQVANINTPEARLL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK MV+ VE+ I +++LGL+P  +G V+R+ +P  TEERR  LVK+   YAE++K
Sbjct: 67  LIQPWDKSMVSEVEKAIQKADLGLSPSSDGTVIRLAIPALTEERRKELVKITKKYAEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD  ++LKK  K G+ +ED +    +D+Q +TDS IK ID     K+KEIM 
Sbjct: 127 VAVRNVRRDANENLKKLEKDGELTEDDLRGYADDVQTLTDSYIKKIDESAAIKEKEIME 185


>gi|325971044|ref|YP_004247235.1| ribosome-recycling factor [Spirochaeta sp. Buddy]
 gi|324026282|gb|ADY13041.1| Ribosome-recycling factor [Spirochaeta sp. Buddy]
          Length = 184

 Score =  171 bits (434), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 87/186 (46%), Positives = 127/186 (68%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M QV+D    + +M  ++  L KD   LRTGR S S+LD ++V+ YGS  P+NQVA V+V
Sbjct: 1   MQQVLD--TCESKMLKSLESLSKDFAGLRTGRASASLLDKIRVDYYGSETPINQVATVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+V+  WDK +++++E+ I +S+LGL P  +G+++R+  P   EERR  LVK A  
Sbjct: 59  PEARMIVIQPWDKSVLSAIEKAILKSDLGLPPNNDGKLIRLNFPPLNEERRKQLVKSAKN 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+S++++RN+RR+ MD LKK +KSG  SED +   E+ IQK+TDS I  I+S  +EK+
Sbjct: 119 TAEQSRVAMRNVRREAMDELKKLQKSGDISEDELKDAESKIQKMTDSYITQINSLSDEKE 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEI 184


>gi|219669723|ref|YP_002460158.1| ribosome recycling factor [Desulfitobacterium hafniense DCB-2]
 gi|254809508|sp|B8FRG2|RRF_DESHD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219539983|gb|ACL21722.1| ribosome recycling factor [Desulfitobacterium hafniense DCB-2]
          Length = 185

 Score =  171 bits (434), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 83/180 (46%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +DRM   +  LK++  T+R GR +P+MLD + VE YG+  P+NQ+AN++V EPRML
Sbjct: 6   LKEAEDRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  +  +E+ I +S+LGLNP  +G V+R+ +P+ T ERR  +VK     AE S+
Sbjct: 66  TIQPWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKKAEDSR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K   ASED V   ++D+QK+TD  +K ID     K+KEIM  
Sbjct: 126 VAVRNIRRDSNDELKKLEKDHTASEDEVKRAQDDVQKMTDKFVKEIDRIMGTKEKEIMEV 185


>gi|254449718|ref|ZP_05063155.1| ribosome recycling factor [Octadecabacter antarcticus 238]
 gi|198264124|gb|EDY88394.1| ribosome recycling factor [Octadecabacter antarcticus 238]
          Length = 187

 Score =  171 bits (433), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 83/182 (45%), Positives = 120/182 (65%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  ++  RM   I+ L+ +  +LRTGR S S+L+ + V+AYGS  P+NQV  V V E 
Sbjct: 6   ILDTDDLTRRMDGAIANLRVEFASLRTGRASASILEPIMVDAYGSQTPINQVGTVNVPES 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ V+VWDK +V+ VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 66  RMVTVNVWDKGLVSKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTQLTKVAGTYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
             ++S+RN+RRDGMD +KK++  G  SED     E  +Q++T+  IK +D   E K+ EI
Sbjct: 126 NGRVSIRNVRRDGMDQVKKAKNDG-MSEDDQKFWEGAVQEMTNDYIKRVDDQLEIKQAEI 184

Query: 184 MH 185
           M 
Sbjct: 185 MQ 186


>gi|262277277|ref|ZP_06055070.1| ribosome recycling factor [alpha proteobacterium HIMB114]
 gi|262224380|gb|EEY74839.1| ribosome recycling factor [alpha proteobacterium HIMB114]
          Length = 186

 Score =  171 bits (433), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 82/160 (51%), Positives = 112/160 (70%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + +M D+I  L KD+ T+RTGR   SMLDLVKVE YG  +P+NQVA +TV +P+ +
Sbjct: 7   LKSFEKKMEDSIVSLGKDLSTVRTGRAHSSMLDLVKVEVYGQSMPINQVATITVTDPQTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            + VWD   V   E+ I ES+L LNP+++GQ+LRIPVP+  E+RR  L K+ +  +EK K
Sbjct: 67  SIQVWDANNVKFCEKAIRESDLNLNPVIDGQLLRIPVPKLNEDRRKELSKIVNQQSEKIK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           IS+RN+RR GMD LKK  K+   SED    L N++QKITD
Sbjct: 127 ISIRNVRRTGMDFLKKEEKNKNISEDESKKLSNELQKITD 166


>gi|294677163|ref|YP_003577778.1| ribosome recycling factor [Rhodobacter capsulatus SB 1003]
 gi|294475983|gb|ADE85371.1| ribosome recycling factor [Rhodobacter capsulatus SB 1003]
          Length = 187

 Score =  171 bits (432), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 84/181 (46%), Positives = 121/181 (66%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  +++ RM   +  LK +  TLRTGR S SM++ + V+AYGS VP+NQV  + V EPR
Sbjct: 7   IDTDDLERRMEGAMHALKHEFGTLRTGRASASMVEPIMVDAYGSLVPINQVGTINVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V+VWDK M+  VE+ I +S LG+NP   G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTVNVWDKGMINKVEKAIRDSGLGINPQTNGPIIMLPIPELNEERRRELTKVAAQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++ +G  SED     E +I+++T   I  +D   E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKAKANG-MSEDDQKFWEGEIEELTKKHIGLVDKALEGKQAEIM 185

Query: 185 H 185
           H
Sbjct: 186 H 186


>gi|15837653|ref|NP_298341.1| ribosome recycling factor [Xylella fastidiosa 9a5c]
 gi|22001954|sp|Q9PEH7|RRF_XYLFA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|9105995|gb|AAF83861.1|AE003942_5 ribosome recycling factor [Xylella fastidiosa 9a5c]
          Length = 185

 Score =  170 bits (431), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 84/184 (45%), Positives = 126/184 (68%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   Q+ +DRM  +I  L+  + ++RTGR SPS+LD +K++AYG+  PLNQVA+++V
Sbjct: 2   LNQI--KQDAQDRMTKSIDALRNSLASVRTGRASPSLLDGIKIKAYGTDTPLNQVASISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R LV++V+DK M   VE+ I+ S+LGL P V G ++R+ +P  TEERR  L KV H+
Sbjct: 60  SEGRSLVITVFDKNMSKDVEKAIYASDLGLTPTVVGTLIRLNLPPLTEERRKELTKVVHS 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+++RNIRRD    +K   KS + +ED V   E DIQK+TD  IK++D   + K+
Sbjct: 120 EGEDTKVAIRNIRRDANQQIKDMLKSKEITEDEVRQGEEDIQKLTDKAIKSVDEVVKSKE 179

Query: 181 KEIM 184
           +E+M
Sbjct: 180 QELM 183


>gi|52785632|ref|YP_091461.1| ribosome recycling factor [Bacillus licheniformis ATCC 14580]
 gi|163119440|ref|YP_079046.2| ribosome recycling factor [Bacillus licheniformis ATCC 14580]
 gi|319645965|ref|ZP_08000195.1| ribosome-recycling factor [Bacillus sp. BT1B_CT2]
 gi|60390243|sp|Q65JJ6|RRF_BACLD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|52348134|gb|AAU40768.1| Frr [Bacillus licheniformis ATCC 14580]
 gi|145902947|gb|AAU23408.2| ribosome recycling factor [Bacillus licheniformis ATCC 14580]
 gi|317391715|gb|EFV72512.1| ribosome-recycling factor [Bacillus sp. BT1B_CT2]
          Length = 185

 Score =  170 bits (430), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K+RM   IS  ++++ T+R GR +PS+LD V VE YG+  PLNQ+A++TV E RML
Sbjct: 6   MNETKERMQKAISAYQRELATVRAGRANPSLLDKVAVEYYGAQTPLNQIASITVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  L K+   Y+E +K
Sbjct: 66  VITPYDKTALGDIEKAIQKADLGVTPSNDGNIIRITIPPLTEERRKELAKLVKKYSEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+G+ +ED + S   D+QK+TD  +  ID   ++K+KEIM  
Sbjct: 126 VAVRNIRRDANDDLKKLEKNGEMTEDELRSSTEDVQKLTDEYVSKIDEITKDKEKEIMEV 185


>gi|89895289|ref|YP_518776.1| hypothetical protein DSY2543 [Desulfitobacterium hafniense Y51]
 gi|122482357|sp|Q24UG0|RRF_DESHY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|89334737|dbj|BAE84332.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 185

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +DRM   +  LK++  T+R GR +P+MLD + VE YG+  P+NQ+AN++V EPRML
Sbjct: 6   LKEAEDRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  +  +E+ I +S+LGLNP  +G V+R+ +P+ T ERR  +VK     AE S+
Sbjct: 66  TIQPWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKKAEDSR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K   ASED V   ++D+QK+TD  +K I+     K+KEIM  
Sbjct: 126 VAVRNIRRDSNDELKKLEKDHTASEDEVKRAQDDVQKMTDKFVKEIERIMGTKEKEIMEV 185


>gi|28198252|ref|NP_778566.1| ribosome recycling factor [Xylella fastidiosa Temecula1]
 gi|32129996|sp|Q87EH6|RRF_XYLFT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|28056322|gb|AAO28215.1| ribosome recycling factor [Xylella fastidiosa Temecula1]
 gi|307579357|gb|ADN63326.1| ribosome recycling factor [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 185

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/184 (45%), Positives = 126/184 (68%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   Q+ +DRM  +I  L+  + ++RTGR SPS+LD +K++AYG+  PLNQVA+++V
Sbjct: 2   LNQI--KQDAQDRMTKSIDALRNSLASVRTGRASPSLLDGIKIKAYGTDTPLNQVASISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R LV++V+DK M   VE+ I+ S+LGL P V G ++R+ +P  TEERR  L KV H+
Sbjct: 60  SEGRSLVITVFDKNMSKDVEKAIYASDLGLTPTVVGTLIRLNLPPLTEERRKELTKVVHS 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+++RNIRRD    +K   KS + +ED V   E DIQK+TD  IK++D   + K+
Sbjct: 120 EGEDTKVAIRNIRRDANQQIKDMLKSKEITEDEVRHGEEDIQKLTDKAIKSVDEVVKSKE 179

Query: 181 KEIM 184
           +E+M
Sbjct: 180 QELM 183


>gi|71275615|ref|ZP_00651900.1| Ribosome recycling factor [Xylella fastidiosa Dixon]
 gi|71899512|ref|ZP_00681669.1| Ribosome recycling factor [Xylella fastidiosa Ann-1]
 gi|170729576|ref|YP_001775009.1| ribosome recycling factor [Xylella fastidiosa M12]
 gi|182680889|ref|YP_001829049.1| ribosome recycling factor [Xylella fastidiosa M23]
 gi|71163506|gb|EAO13223.1| Ribosome recycling factor [Xylella fastidiosa Dixon]
 gi|71730732|gb|EAO32806.1| Ribosome recycling factor [Xylella fastidiosa Ann-1]
 gi|167964369|gb|ACA11379.1| ribosome recycling factor [Xylella fastidiosa M12]
 gi|182630999|gb|ACB91775.1| ribosome recycling factor [Xylella fastidiosa M23]
          Length = 190

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/184 (45%), Positives = 126/184 (68%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   Q+ +DRM  +I  L+  + ++RTGR SPS+LD +K++AYG+  PLNQVA+++V
Sbjct: 7   LNQI--KQDAQDRMTKSIDALRNSLASVRTGRASPSLLDGIKIKAYGTDTPLNQVASISV 64

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R LV++V+DK M   VE+ I+ S+LGL P V G ++R+ +P  TEERR  L KV H+
Sbjct: 65  SEGRSLVITVFDKNMSKDVEKAIYASDLGLTPTVVGTLIRLNLPPLTEERRKELTKVVHS 124

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+++RNIRRD    +K   KS + +ED V   E DIQK+TD  IK++D   + K+
Sbjct: 125 EGEDTKVAIRNIRRDANQQIKDMLKSKEITEDEVRHGEEDIQKLTDKAIKSVDEVVKSKE 184

Query: 181 KEIM 184
           +E+M
Sbjct: 185 QELM 188


>gi|71899406|ref|ZP_00681565.1| Ribosome recycling factor [Xylella fastidiosa Ann-1]
 gi|71730815|gb|EAO32887.1| Ribosome recycling factor [Xylella fastidiosa Ann-1]
          Length = 190

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/184 (45%), Positives = 126/184 (68%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   Q+ +DRM  +I  L+  + ++RTGR SPS+LD +K++AYG+  PLNQVA+++V
Sbjct: 7   LNQI--KQDAQDRMTKSIDALRNSLASVRTGRASPSLLDGIKIKAYGTDTPLNQVASISV 64

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R LV++V+DK M   VE+ I+ S+LGL P V G ++R+ +P  TEERR  L KV H+
Sbjct: 65  SEGRSLVITVFDKNMSKDVEKAIYASDLGLTPTVVGTLIRLNLPPLTEERRKELTKVVHS 124

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+++RNIRRD    +K   KS + +ED V   E DIQK+TD  IK++D   + K+
Sbjct: 125 EGEDTKVAIRNIRRDANQQIKDMLKSKEITEDEVRHGEEDIQKLTDKAIKSVDKVVKSKE 184

Query: 181 KEIM 184
           +E+M
Sbjct: 185 QELM 188


>gi|148261537|ref|YP_001235664.1| ribosome recycling factor [Acidiphilium cryptum JF-5]
 gi|326405026|ref|YP_004285108.1| ribosome-recycling factor [Acidiphilium multivorum AIU301]
 gi|166230404|sp|A5G1L3|RRF_ACICJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146403218|gb|ABQ31745.1| ribosome recycling factor [Acidiphilium cryptum JF-5]
 gi|325051888|dbj|BAJ82226.1| ribosome-recycling factor [Acidiphilium multivorum AIU301]
          Length = 188

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/177 (46%), Positives = 117/177 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++ RM   +  LK++   LRTGR +P++LD VKVEAYG+ +PLNQVA V V E RML
Sbjct: 9   LADLQRRMDGAMETLKREFSGLRTGRANPALLDPVKVEAYGTLMPLNQVATVAVPESRML 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWD+ MV +    I +  LGLNP  +GQ++R+P+P  TEERR  L + A  YAE ++
Sbjct: 69  TVQVWDRGMVNATVAAIRDCGLGLNPQPDGQLIRVPLPLLTEERRNELARAAGKYAEGAR 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VR +RRDGM+ +K   K  +  ED      + +QK+TD+TIK ID    EK+K+I
Sbjct: 129 VAVRGVRRDGMETIKGFEKKHQIGEDQGRDWADRVQKLTDATIKKIDELLVEKEKDI 185


>gi|266622994|ref|ZP_06115929.1| ribosome recycling factor [Clostridium hathewayi DSM 13479]
 gi|288865250|gb|EFC97548.1| ribosome recycling factor [Clostridium hathewayi DSM 13479]
          Length = 184

 Score =  169 bits (429), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/178 (46%), Positives = 118/178 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  +D+M  T+  L+ D MT+R GR +P +LD +KV+ YG+  PL QV N+ V E RM+
Sbjct: 5   LQVYEDKMNKTLEVLESDYMTIRAGRANPHVLDKIKVDYYGTPTPLQQVGNINVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+K ++ ++E+ I  S+LG+NP  +G V+R+  PE TEERR  LVK      E +K
Sbjct: 65  IIQPWEKSLLKAIEKAILTSDLGINPTNDGSVIRLVFPELTEERRKELVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRDG D+ KK +K+ + SED +A  E DIQK+TD  I  ID   E K KE++
Sbjct: 125 VAVRNIRRDGNDYFKKLQKADEISEDDLAEAEEDIQKLTDKMIGKIDKAIEAKSKELL 182


>gi|157828071|ref|YP_001494313.1| ribosome recycling factor [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932770|ref|YP_001649559.1| ribosome recycling factor [Rickettsia rickettsii str. Iowa]
 gi|166231219|sp|A8GQY0|RRF_RICRS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044068|sp|B0BWC7|RRF_RICRO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157800552|gb|ABV75805.1| ribosome recycling factor [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165907857|gb|ABY72153.1| ribosome recycling factor (RRF) [Rickettsia rickettsii str. Iowa]
          Length = 186

 Score =  169 bits (428), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/177 (47%), Positives = 122/177 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRT R S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMEKALKVLDHELKGLRTSRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRTELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM
Sbjct: 128 SLRNIRRDGNEVLKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIM 184


>gi|108804238|ref|YP_644175.1| ribosome recycling factor [Rubrobacter xylanophilus DSM 9941]
 gi|123177371|sp|Q1AW65|RRF_RUBXD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|108765481|gb|ABG04363.1| ribosome recycling factor [Rubrobacter xylanophilus DSM 9941]
          Length = 186

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 127/185 (68%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ VIDL + + RM   +  ++    T+RTGR +P++LD ++VEAYG+ +P+  VA++  
Sbjct: 1   MSDVIDLSDAERRMKGALEAVRHQFATIRTGRANPALLDRIEVEAYGTRMPIKSVASIGA 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L ++ +D  ++ ++ER I +S+LGLNP  +G+++R+P+PE TEERR  L+++   
Sbjct: 61  PEPRLLTITPYDPNLLKTIERAIRDSDLGLNPQNDGKIIRLPIPELTEERRRELIRLVRH 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++SVRN+RRD M  +++ R+ G+ SED     E ++QK+TD+ IK ID    EK+
Sbjct: 121 MAEEGRVSVRNVRRDEMHDIQRLRREGEISEDDERRAEAELQKLTDAYIKRIDEALAEKE 180

Query: 181 KEIMH 185
            E+M 
Sbjct: 181 AELME 185


>gi|16078715|ref|NP_389534.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221309530|ref|ZP_03591377.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221313854|ref|ZP_03595659.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221318777|ref|ZP_03600071.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323049|ref|ZP_03604343.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321315419|ref|YP_004207706.1| ribosome recycling factor [Bacillus subtilis BSn5]
 gi|3122762|sp|P81101|RRF_BACSU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor; AltName: Full=Vegetative
           protein 12B; Short=VEG12B
 gi|2634024|emb|CAB13525.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291484207|dbj|BAI85282.1| ribosome recycling factor [Bacillus subtilis subsp. natto BEST195]
 gi|320021693|gb|ADV96679.1| ribosome recycling factor [Bacillus subtilis BSn5]
          Length = 185

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M   I+  ++++ T+R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTQTKEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK  +  +E+ I +++LGL P  +G ++RI +P  TEERR  LVKV   YAE++K
Sbjct: 66  VITPYDKTAIGDIEKAILKADLGLTPTSDGNMIRIAIPALTEERRKELVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM  
Sbjct: 126 VAVRNVRRDANDDLKKLEKNGDITEDELRASTEDVQKLTDEYVSKIDSVTKDKEKEIMEV 185


>gi|91205947|ref|YP_538302.1| ribosome recycling factor [Rickettsia bellii RML369-C]
 gi|157826692|ref|YP_001495756.1| ribosome recycling factor [Rickettsia bellii OSU 85-389]
 gi|122425318|sp|Q1RHF1|RRF_RICBR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231217|sp|A8GV48|RRF_RICB8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91069491|gb|ABE05213.1| Ribosome recycling factor [Rickettsia bellii RML369-C]
 gi|157801996|gb|ABV78719.1| ribosome recycling factor [Rickettsia bellii OSU 85-389]
          Length = 186

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/184 (46%), Positives = 124/184 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++V   +N++++M   +  L  ++  LRTGR S ++LD V VEAYG  +PL+QVA++T 
Sbjct: 1   MDKVTLKKNLQEKMDKALKVLDHELKGLRTGRASVNLLDSVTVEAYGDRMPLSQVASLTT 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + V VWDK MV+SVE+ I  +NLGL P  +GQ++R+P+P  TEERR  L K+AH 
Sbjct: 61  PDARTINVQVWDKSMVSSVEKAITVANLGLTPSSDGQLIRLPIPALTEERRKELAKLAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E +KIS+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K+
Sbjct: 121 YGEDTKISLRNIRRDGNEELKKMEKDNIIAKDEHHSLAEQVQKLTDEYSSKVDSAIKQKE 180

Query: 181 KEIM 184
           +EIM
Sbjct: 181 QEIM 184


>gi|294666399|ref|ZP_06731645.1| ribosome releasing factor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292603841|gb|EFF47246.1| ribosome releasing factor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 185

 Score =  169 bits (427), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 83/177 (46%), Positives = 119/177 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQTRMTKSIDALRHSLTTIRTGRASPALLDGIKVKAYGADTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H   E SK+
Sbjct: 67  ISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDSKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD    +K   K    +ED   S E+DIQK+TD  IKN+D   + K++E+M
Sbjct: 127 AIRNIRRDANQQVKDLLKDKAVTEDEARSAEDDIQKLTDKAIKNVDEVVKGKEQELM 183


>gi|313891920|ref|ZP_07825521.1| ribosome recycling factor [Dialister microaerophilus UPII 345-E]
 gi|329120951|ref|ZP_08249582.1| ribosome recycling factor [Dialister micraerophilus DSM 19965]
 gi|313119563|gb|EFR42754.1| ribosome recycling factor [Dialister microaerophilus UPII 345-E]
 gi|327471113|gb|EGF16567.1| ribosome recycling factor [Dialister micraerophilus DSM 19965]
          Length = 185

 Score =  169 bits (427), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 127/179 (70%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +++RM  +I  LK +  ++RTG+ SPS+LD + V+ YG+  P++QV +++V E RML
Sbjct: 6   INELRERMDKSIQALKTEFSSIRTGQASPSLLDRIFVDYYGTQTPISQVGSISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WDK ++  +E+ I +S+LGL P+ +G ++R+ +P+ TEERR  LVK+A+  AE++K
Sbjct: 66  VVQPWDKSVLKEIEKAILQSDLGLVPMNDGNLIRMAIPQLTEERRKDLVKIANKKAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRDG   LKK  K G  S+D+++  E+++Q +TD  IK ID+  E+K KEIM 
Sbjct: 126 VAIRNIRRDGNTFLKKEEKKGDISKDIISEAEDEVQDLTDIKIKEIDAVTEKKIKEIMS 184


>gi|303228555|ref|ZP_07315383.1| ribosome recycling factor [Veillonella atypica ACS-134-V-Col7a]
 gi|303232131|ref|ZP_07318834.1| ribosome recycling factor [Veillonella atypica ACS-049-V-Sch6]
 gi|302513237|gb|EFL55276.1| ribosome recycling factor [Veillonella atypica ACS-049-V-Sch6]
 gi|302516802|gb|EFL58716.1| ribosome recycling factor [Veillonella atypica ACS-134-V-Col7a]
          Length = 186

 Score =  168 bits (426), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 81/180 (45%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  ++RM  +I  LK +  ++RTGR S ++LD V V+ YGS  P+NQVAN++V EPRM+
Sbjct: 7   MQQQEERMNKSIESLKHEFASIRTGRASTALLDKVMVDYYGSPTPINQVANISVPEPRMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ WDK M+ ++E+ I +S+LGLNP  +G  +R+ +P+ TEERR  +VKV H  AE +K
Sbjct: 67  LIAPWDKSMIGAIEKAILQSDLGLNPGNDGTAIRLTIPQLTEERRKEIVKVVHKKAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+   +ED      + IQK+TD  IK ID     K+K+++  
Sbjct: 127 VAVRNIRRDANDALKKEEKAKTITEDDAKDGLDQIQKLTDKKIKQIDELKAVKEKDVLEV 186


>gi|149915215|ref|ZP_01903743.1| ribosome recycling factor [Roseobacter sp. AzwK-3b]
 gi|149810936|gb|EDM70775.1| ribosome recycling factor [Roseobacter sp. AzwK-3b]
          Length = 189

 Score =  168 bits (426), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 81/181 (44%), Positives = 118/181 (65%), Gaps = 1/181 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  +++ RM   +  LK +  +LRTGR S S+L+ V V+AYG   P+NQV  V V E R
Sbjct: 9   LDTGDLQRRMEGAMGALKTEFASLRTGRASASILEPVMVDAYGQRTPINQVGTVNVPESR 68

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 69  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRKELTKVAAQYAEH 128

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMD +KK++  G  SED     E+++Q +T+  I  +D   E K+ EIM
Sbjct: 129 ARVAVRNVRRDGMDQIKKAKADG-MSEDDQKFWESEVQDLTNKFIAQVDEALETKQAEIM 187

Query: 185 H 185
            
Sbjct: 188 Q 188


>gi|296330867|ref|ZP_06873342.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674385|ref|YP_003866057.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151872|gb|EFG92746.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412629|gb|ADM37748.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 185

 Score =  168 bits (426), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M   I+  ++++ T+R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTQTKEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  LVKV   YAE +K
Sbjct: 66  VVTPYDKSAIGDIEKAILKADLGITPTSDGNMIRIAIPALTEERRKELVKVVKKYAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM  
Sbjct: 126 VAVRNVRRDANDDLKKLEKNGDITEDELRASTEDVQKLTDEYVSKIDSVTKDKEKEIMEV 185


>gi|296132870|ref|YP_003640117.1| ribosome recycling factor [Thermincola sp. JR]
 gi|296031448|gb|ADG82216.1| ribosome recycling factor [Thermincola potens JR]
          Length = 185

 Score =  168 bits (425), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 78/175 (44%), Positives = 118/175 (67%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +DRM   +  L+KD+ TLRTGR +P++L+ ++V+ YG   P+NQ+A V+  EPR+LV+  
Sbjct: 10  EDRMRKAVEALRKDLATLRTGRATPALLEKIQVDYYGVPTPINQMAKVSAPEPRLLVIQP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK ++  +E+ I +S+LGL P  +G V+R+ +P+ T+ERR  LVK+    AE  ++++R
Sbjct: 70  WDKSVLGEIEKAIMKSDLGLTPNNDGTVIRLNIPQLTQERRAELVKICKKKAEDGRVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD  D LK+  KSG  SED     + +IQK+TD  IK +D   E K++EIM 
Sbjct: 130 NIRRDANDQLKEFEKSGDISEDDNRRGQEEIQKLTDKYIKEVDQLLEHKEQEIME 184


>gi|311068174|ref|YP_003973097.1| ribosome recycling factor [Bacillus atrophaeus 1942]
 gi|310868691|gb|ADP32166.1| ribosome recycling factor [Bacillus atrophaeus 1942]
          Length = 185

 Score =  168 bits (425), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+RM   ++  ++++ T+R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTETKERMEKAVAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  LVK+   YAE++K
Sbjct: 66  VITPYDKTAIGDIEKAILKADLGVTPTSDGNIIRIAIPALTEERRKELVKLVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM  
Sbjct: 126 VAVRNVRRDANDDLKKLEKNGDITEDELRTSNEDVQKLTDEYVSKIDSVTKDKEKEIMEV 185


>gi|238019366|ref|ZP_04599792.1| hypothetical protein VEIDISOL_01230 [Veillonella dispar ATCC 17748]
 gi|237864065|gb|EEP65355.1| hypothetical protein VEIDISOL_01230 [Veillonella dispar ATCC 17748]
          Length = 186

 Score =  168 bits (425), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 83/180 (46%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  ++RM  +I  LK +  ++RTGR S ++LD V V+ YGS  P+NQVAN++V EPRM+
Sbjct: 7   LQQAEERMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK M+ ++E+ I +S+LGLNP  +G  +R+ +P+ TEERR  +VKV H  AE +K
Sbjct: 67  VIAPWDKTMIGAIEKAILQSDLGLNPGNDGAQIRLTIPQLTEERRKEIVKVVHKKAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+   +ED      + IQK+TD+ IK ID     K+K+++  
Sbjct: 127 VAVRNIRRDVNDALKKEEKAKTITEDDAKDGLDQIQKLTDAKIKQIDELKAVKEKDVLEV 186


>gi|157692331|ref|YP_001486793.1| ribosome recycling factor [Bacillus pumilus SAFR-032]
 gi|166991553|sp|A8FDB6|RRF_BACP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157681089|gb|ABV62233.1| peptide chain release factor RF4 [Bacillus pumilus SAFR-032]
          Length = 185

 Score =  168 bits (425), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M   +    +++ T+R GR + S+LD V V+ YG+  PLNQ+A++TV E RML
Sbjct: 6   LNQTKEKMEKAVQAYGRELATVRAGRANASLLDKVTVDYYGAQTPLNQIASITVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+ I +S+LG+ P  +G V+RI +P  TEERR  LVKV   Y+E++K
Sbjct: 66  IITPYDKTAIGDIEKSIQKSDLGITPTSDGNVIRIAIPALTEERRKELVKVVRKYSEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G+ +ED + S   D+QK+TD  +  ID   ++K+KEIM  
Sbjct: 126 VAVRNVRRDANDELKKLEKNGEITEDELRSSTEDVQKLTDEYVAKIDDVMKDKEKEIMEV 185


>gi|328553453|gb|AEB23945.1| ribosome recycling factor [Bacillus amyloliquefaciens TA208]
          Length = 185

 Score =  168 bits (425), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+RM   ++   +++ ++R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTQTKERMEKAVAAYSRELASVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVSEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  LVKV   YAE++K
Sbjct: 66  VVTPYDKTAIGDIEKAILKADLGVTPTSDGTIIRIAIPALTEERRKELVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM 
Sbjct: 126 VAVRNVRRDSNDELKKLEKNGDITEDELRASSEDVQKLTDEFVSKIDSVTKDKEKEIME 184


>gi|330445148|ref|ZP_08308800.1| ribosome recycling factor [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489339|dbj|GAA03297.1| ribosome recycling factor [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 185

 Score =  168 bits (425), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 82/179 (45%), Positives = 120/179 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  ++  LK  ++ +RTGR  PS+LD + VE YG++ PLNQVANV   + R L 
Sbjct: 7   QDAQSRMEKSVEALKNQLVKIRTGRAHPSLLDTISVEYYGANTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+  A AE+ ++
Sbjct: 67  ITVFDRELAPKVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD   ++K   K  + SED     +++IQK+TD  IKNID+  E K+KE+M  
Sbjct: 127 AVRNIRRDANANVKALLKDKEISEDDDRRAQDEIQKLTDDAIKNIDAVLEVKEKELMEV 185


>gi|15604030|ref|NP_220545.1| ribosome recycling factor [Rickettsia prowazekii str. Madrid E]
 gi|6226047|sp|Q9ZE08|RRF_RICPR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|3860721|emb|CAA14622.1| RIBOSOME RECYCLING FACTOR (rrf) [Rickettsia prowazekii]
 gi|292571749|gb|ADE29664.1| Ribosome recycling factor [Rickettsia prowazekii Rp22]
          Length = 186

 Score =  168 bits (425), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 84/175 (48%), Positives = 120/175 (68%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++++M   I  L  ++  LRTGR S + LD V VEAYGS +PL+QVA+++  + R + V 
Sbjct: 10  LQEKMEKAIKVLGNELKGLRTGRASINFLDSVTVEAYGSKIPLSQVASLSTPDARTINVQ 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           VWDK MV+SVE+GI  +NLGL    +GQ++R+P+P  TEERR  LVK+AH Y E++KIS+
Sbjct: 70  VWDKSMVSSVEKGITIANLGLTHATDGQLIRLPIPSLTEERRKELVKLAHKYGEETKISL 129

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRRDG++ LKK  K     +D   +L   IQK+TD     +DS  ++K++EIM
Sbjct: 130 RNIRRDGIEELKKLEKDNIIVKDEYHNLSEQIQKLTDEYSSKVDSAIKQKEQEIM 184


>gi|313893396|ref|ZP_07826968.1| ribosome recycling factor [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313442037|gb|EFR60457.1| ribosome recycling factor [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 186

 Score =  167 bits (424), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  ++RM  +I  LK +  ++RTGR S ++LD V V+ YGS  P+NQVAN++V EPRM+
Sbjct: 7   LQQAEERMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK M+ ++E+ I +S+LGLNP  +G  +R+ +P+ TEERR  +VKV H  AE +K
Sbjct: 67  VIAPWDKTMIGAIEKAILQSDLGLNPGNDGAQIRLTIPQLTEERRKEIVKVVHKKAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+   +ED      ++IQK+TD+ +K+ID     K+K+++  
Sbjct: 127 VAVRNIRRDVNDALKKEEKAKTITEDDAKDGLDEIQKLTDAKVKHIDELKAVKEKDVLEV 186


>gi|114566420|ref|YP_753574.1| ribosome recycling factor [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318505|sp|Q0AYK1|RRF_SYNWW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114337355|gb|ABI68203.1| ribosome recycling factor [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 185

 Score =  167 bits (424), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 85/180 (47%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM  TI  L+KD+ +LR GR +P+ML+ + V+ YG   P+NQ+AN+TV E R+L
Sbjct: 6   LSDTEERMKKTIEHLRKDLASLRAGRANPAMLEKIMVDYYGQPTPINQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++AS+E+ I +S+LG+NP  +G V+R+ +P+ TEERR  LVKV    AE+++
Sbjct: 66  VIQPWDKTIIASIEKAIMKSDLGINPSNDGNVIRLVIPQLTEERRKELVKVLRKRAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + LK   K    SED      +DIQK TD  IK IDS  + K+KEIM  
Sbjct: 126 VAVRNIRRDSNELLKSGEKEKLISEDDNKKGMDDIQKETDRHIKEIDSILQGKEKEIMEV 185


>gi|154686069|ref|YP_001421230.1| ribosome recycling factor [Bacillus amyloliquefaciens FZB42]
 gi|166230410|sp|A7Z4S3|RRF_BACA2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|154351920|gb|ABS73999.1| Frr [Bacillus amyloliquefaciens FZB42]
          Length = 185

 Score =  167 bits (424), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+RM   ++   +++ ++R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTQTKERMEKAVAAYSRELASVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  LVKV   YAE++K
Sbjct: 66  VVTPYDKTAIGDIEKAILKADLGVTPTSDGTIIRIAIPALTEERRKELVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM  
Sbjct: 126 VAVRNVRRDSNDDLKKLEKNGDITEDELRASSEDVQKLTDEYVSKIDSVTKDKEKEIMEV 185


>gi|308173615|ref|YP_003920320.1| ribosome recycling factor [Bacillus amyloliquefaciens DSM 7]
 gi|307606479|emb|CBI42850.1| ribosome recycling factor [Bacillus amyloliquefaciens DSM 7]
 gi|328911756|gb|AEB63352.1| ribosome recycling factor [Bacillus amyloliquefaciens LL3]
          Length = 185

 Score =  167 bits (424), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+RM   ++   +++ ++R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTQTKERMEKAVAAYSRELASVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  LVKV   YAE++K
Sbjct: 66  VVTPYDKTAIGDIEKAILKADLGVTPTSDGTIIRIAIPALTEERRKELVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM 
Sbjct: 126 VAVRNVRRDSNDELKKLEKNGDITEDELRASSEDVQKLTDEFVSKIDSVTKDKEKEIME 184


>gi|157803342|ref|YP_001491891.1| ribosome recycling factor [Rickettsia canadensis str. McKiel]
 gi|166231218|sp|A8EXM3|RRF_RICCK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157784605|gb|ABV73106.1| ribosome recycling factor [Rickettsia canadensis str. McKiel]
          Length = 186

 Score =  167 bits (424), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 83/177 (46%), Positives = 123/177 (69%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVIVEAYGSKIPLSQVASISTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+ VE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSLVEKGITIANLGLTPATDGQLIRLPIPILTEERRKELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + LKK  K+   ++D   SL   +QK+T+     +DS  ++K++EIM
Sbjct: 128 SLRNIRRDGNEELKKLEKNNILTKDEHHSLSEQVQKLTNDYSNKVDSAIKQKEQEIM 184


>gi|194015089|ref|ZP_03053706.1| ribosome recycling factor [Bacillus pumilus ATCC 7061]
 gi|194014115|gb|EDW23680.1| ribosome recycling factor [Bacillus pumilus ATCC 7061]
          Length = 185

 Score =  167 bits (424), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M   +    +++ T+R GR + S+LD V V+ YG+  PLNQ+A++TV E RML
Sbjct: 6   LNQTKEKMEKAVQAYGRELATVRAGRANASLLDKVTVDYYGAQTPLNQIASITVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+ I +S+LG+ P  +G V+RI +P  TEERR  LVKV   Y+E++K
Sbjct: 66  IITPYDKTAIGDIEKSIQKSDLGITPTSDGNVIRIAIPALTEERRKELVKVVRKYSEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G+ +ED + S   D+QK+TD  +  ID   ++K+KEIM  
Sbjct: 126 VAVRNVRRDANDELKKLEKNGEITEDELRSSTEDVQKLTDEYVAKIDDVTKDKEKEIMEV 185


>gi|297617174|ref|YP_003702333.1| ribosome recycling factor [Syntrophothermus lipocalidus DSM 12680]
 gi|297145011|gb|ADI01768.1| ribosome recycling factor [Syntrophothermus lipocalidus DSM 12680]
          Length = 188

 Score =  167 bits (423), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++++ RM  T+  L KD+ +LR GR +P+MLD + VE YG   P+NQ+ N+ V EPRML
Sbjct: 9   VKDVESRMKKTVEHLVKDLASLRAGRANPAMLDKITVEYYGQPTPINQLGNIGVPEPRML 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  +  +E+ I +S+LG+NP  +G V+RI +P  TEERR  +VK+    AE++K
Sbjct: 69  VIQPWDKTAIPEIEKAILKSDLGVNPTNDGNVIRIAIPPLTEERRKEMVKMVRKRAEEAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RR+  D +K + K    SED      ++IQK+TD+TIK+ID   + K+K+IM  
Sbjct: 129 VAVRNLRREANDEIKLAEKEKLISEDEAKKRLDEIQKLTDNTIKDIDKVLQTKEKDIMEV 188


>gi|294140006|ref|YP_003555984.1| ribosome recycling factor [Shewanella violacea DSS12]
 gi|293326475|dbj|BAJ01206.1| ribosome recycling factor [Shewanella violacea DSS12]
          Length = 185

 Score =  167 bits (423), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 85/173 (49%), Positives = 109/173 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   I   K  M  +RTGR  PS+LD +KV  YGS  PL QV NVT+ + R L VSV+D
Sbjct: 12  RMAKCIEATKTQMAKVRTGRAHPSLLDSIKVSYYGSMTPLKQVGNVTIEDSRTLAVSVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             M+ +VE+ I  S+LGLNP+  G V+RIP+P  TEERR  L+KV  A AE S+ISVRN+
Sbjct: 72  ATMIQAVEKAIMSSDLGLNPMSAGAVIRIPLPSLTEERRKDLIKVVRAEAENSRISVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD    +K   K  + +ED V   E++IQK TD+ IK ID     K+ E+M 
Sbjct: 132 RRDANSEIKALEKEKECTEDDVHRTEDEIQKFTDAHIKQIDELLSAKEAELME 184


>gi|282850149|ref|ZP_06259528.1| ribosome recycling factor [Veillonella parvula ATCC 17745]
 gi|294791801|ref|ZP_06756949.1| ribosome recycling factor [Veillonella sp. 6_1_27]
 gi|282579642|gb|EFB85046.1| ribosome recycling factor [Veillonella parvula ATCC 17745]
 gi|294457031|gb|EFG25393.1| ribosome recycling factor [Veillonella sp. 6_1_27]
          Length = 186

 Score =  167 bits (423), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  +DRM  +I  LK +  ++RTGR S ++LD V V+ YGS  P+NQVAN++V EPRM+
Sbjct: 7   LQQAEDRMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK M+ ++E+ I +S+LGLNP  +G  +R+ +P+ TEERR  +VKV H  AE +K
Sbjct: 67  VIAPWDKTMIGAIEKAILQSDLGLNPGNDGAQIRLSIPQLTEERRKEIVKVVHKKAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + LKK  K+   +ED      + IQK+TD+ +K ID     K+K+++  
Sbjct: 127 VAVRNIRRDVNEALKKEEKAKTITEDDAKDGLDQIQKLTDAKVKQIDELKAVKEKDVLEV 186


>gi|254519196|ref|ZP_05131252.1| ribosome recycling factor [Clostridium sp. 7_2_43FAA]
 gi|226912945|gb|EEH98146.1| ribosome recycling factor [Clostridium sp. 7_2_43FAA]
          Length = 185

 Score =  167 bits (423), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 80/180 (44%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M  TIS LK D+ T+R GR +P+MLD ++V+ YGS  PLNQVAN++  EPR+L
Sbjct: 6   IQKAEEKMKKTISVLKSDLSTMRAGRANPTMLDRIQVDYYGSPCPLNQVANISAPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S W+K ++  +E+ I  S+LG+NP  +G V+R+ VPE TEE R  LVK      E++K
Sbjct: 66  VISPWEKSLMKEIEKAILTSDLGINPSNDGSVIRLVVPELTEETRRNLVKNVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRR+  D +K  +K G+ +ED + + E  +QKI DS +K +D+    K+KEIM  
Sbjct: 126 VALRSIRREANDKIKALKKDGEITEDELKNSEEKVQKIIDSFVKEVDTIIVAKEKEIMSI 185


>gi|121533727|ref|ZP_01665554.1| ribosome recycling factor [Thermosinus carboxydivorans Nor1]
 gi|121307718|gb|EAX48633.1| ribosome recycling factor [Thermosinus carboxydivorans Nor1]
          Length = 186

 Score =  167 bits (423), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 118/174 (67%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L+K+  +LR GR +PS+LD V V+ YG   P+NQVAN++V EPR++V+  W
Sbjct: 12  EKMKKALEVLRKEFASLRAGRATPSLLDKVTVDYYGMPSPINQVANISVPEPRLIVIQPW 71

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K M+A +E+ I +S+LGL P  +G V+R+ +P+ T++RR  LVKV H  AE++++++RN
Sbjct: 72  EKSMLAPIEKAILKSDLGLTPTNDGNVIRLSIPQLTQQRRSELVKVVHKKAEEARVAIRN 131

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RRD  D +KK  K  + SED     + D+QK+TD  IK +D     K+KEIM 
Sbjct: 132 LRRDANDAIKKLEKEKQVSEDEAKKAQEDMQKLTDKYIKEVDQVMAAKEKEIME 185


>gi|325474924|gb|EGC78110.1| ribosome-recycling factor [Treponema denticola F0402]
          Length = 185

 Score =  167 bits (422), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 120/178 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N +++M  T++ LK++   LRTGR S ++ D ++V  YG   PLNQ+AN+++ E R++V
Sbjct: 7   KNCEEKMKKTVAALKEEFNMLRTGRASSALFDKIRVNCYGESTPLNQLANISIPEARLVV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK ++  +E+ + +++L +NP  +G+V+RI +P  TE+RR  L K A   AE S++
Sbjct: 67  IQPWDKGLLVEIEKAVLQADLSVNPTNDGKVIRIAIPPLTEDRRKDLAKKAKTIAENSRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           SVRNIRRDG+D  KK +K GK SED + + E+  QK TD+ I  I+   E K+KEIM 
Sbjct: 127 SVRNIRRDGIDEAKKLQKDGKISEDQLKTAEDAFQKSTDAYIAEINKVLEAKEKEIME 184


>gi|330836659|ref|YP_004411300.1| ribosome recycling factor [Spirochaeta coccoides DSM 17374]
 gi|329748562|gb|AEC01918.1| ribosome recycling factor [Spirochaeta coccoides DSM 17374]
          Length = 188

 Score =  167 bits (422), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 81/180 (45%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M  +++ L      LRTGR + ++ D +KV+ YG   PLNQVA++++ E RM+
Sbjct: 9   LSQCEDKMNKSVNTLSASFQGLRTGRATAAIFDKIKVDYYGQETPLNQVASISIPEARMV 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  +E+ I +S LGLNP  +G++LRI  P  TE+RR  LVK + A AE+S+
Sbjct: 69  VIQPWDKGLLGPIEKAIQKSELGLNPNNDGKLLRINFPPLTEDRRKDLVKSSKATAEQSR 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD M+ LKK +KSG  SED     E+ IQK+TDS I  ++S   +K+KEIM  
Sbjct: 129 VAIRNIRRDAMEDLKKLQKSGAISEDEQKDGESRIQKLTDSFITKVNSLATDKEKEIMEI 188


>gi|21242171|ref|NP_641753.1| ribosome recycling factor [Xanthomonas axonopodis pv. citri str.
           306]
 gi|78047031|ref|YP_363206.1| ribosome recycling factor [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325929597|ref|ZP_08190711.1| ribosome recycling factor [Xanthomonas perforans 91-118]
 gi|24418656|sp|Q8PMK8|RRF_XANAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123585494|sp|Q3BVK7|RRF_XANC5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21107587|gb|AAM36289.1| ribosome recycling factor [Xanthomonas axonopodis pv. citri str.
           306]
 gi|78035461|emb|CAJ23106.1| ribosome recycling factor [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325540107|gb|EGD11735.1| ribosome recycling factor [Xanthomonas perforans 91-118]
          Length = 185

 Score =  167 bits (422), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 82/177 (46%), Positives = 119/177 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQTRMTKSIDALRHSLTTIRTGRASPALLDGIKVKAYGADTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H   E SK+
Sbjct: 67  ISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDSKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD    +K   K    +ED   S E+DIQK+TD  IK++D   + K++E+M
Sbjct: 127 AIRNIRRDANQQVKDLLKDKAVTEDEARSAEDDIQKLTDKAIKDVDEVVKGKEQELM 183


>gi|304316875|ref|YP_003852020.1| ribosome recycling factor [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778377|gb|ADL68936.1| ribosome recycling factor [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 184

 Score =  167 bits (422), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+N +++M  +I+ LK ++M++R GR +P++LD + ++ YG+  P+N++A +T  EP+++
Sbjct: 5   LKNTEEKMKKSIAVLKNELMSIRAGRANPALLDRISIDYYGTMTPINKLATITAPEPKVI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD   ++ +E+ I +S+L +NP  +G+++R+  P+ TEERR  LVK+ H   E+++
Sbjct: 65  IIQPWDTSKISEIEKAIQKSDLNINPTSDGKIIRLVFPDLTEERRKELVKLVHKKGEEAR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRRD  D +KK  K+G+ SED     E  +QK+TD  IK ID   E+K+KEIM F
Sbjct: 125 VAVRQIRRDANDIIKKMDKNGEISEDEKLKSEESVQKLTDKYIKEIDKILEQKEKEIMEF 184


>gi|325913951|ref|ZP_08176307.1| ribosome recycling factor [Xanthomonas vesicatoria ATCC 35937]
 gi|325539720|gb|EGD11360.1| ribosome recycling factor [Xanthomonas vesicatoria ATCC 35937]
          Length = 185

 Score =  166 bits (421), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/184 (45%), Positives = 123/184 (66%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V
Sbjct: 2   LNQI--KQDAQTRMTKSIDALRHSLTTVRTGRASPALLDGIKVKAYGTDTPLNQVASISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R LV+S++DK M+  VE+ ++ S+LGL P V G V+R+ +P  TEERR  L K  H 
Sbjct: 60  SEGRSLVISLFDKGMIKDVEKALYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E SK+++RNIRRD    +K   K  K +ED     E+DIQK+TD  IK++D   + K+
Sbjct: 120 EGEDSKVAIRNIRRDANQQVKDLLKDKKVTEDEARGAEDDIQKLTDKAIKDVDEVVKGKE 179

Query: 181 KEIM 184
           +E+M
Sbjct: 180 QELM 183


>gi|182417573|ref|ZP_02948898.1| ribosome recycling factor [Clostridium butyricum 5521]
 gi|237668448|ref|ZP_04528432.1| ribosome recycling factor [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182378586|gb|EDT76114.1| ribosome recycling factor [Clostridium butyricum 5521]
 gi|237656796|gb|EEP54352.1| ribosome recycling factor [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 185

 Score =  166 bits (421), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++N +++M  TIS L+ D+ T++ GR +P+MLD ++VE YGS  PL+QVAN++  EPR+L
Sbjct: 6   IKNAEEKMKKTISVLESDLSTMKAGRANPTMLDRIQVEYYGSMCPLSQVANISAPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K M+  +ER I +S+LGLNP  +G V+R+ VPE T E R  LVK      E++K
Sbjct: 66  MITPWEKPMLKDIERAILKSDLGLNPSNDGSVIRLVVPELTAETRKTLVKNVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR+IR+   D +K  +K G  SED +   E+D+QK TD+ +K ID+    K+KE++  
Sbjct: 126 VAVRSIRKAANDKIKTLKKDGDISEDQIKKGEDDVQKKTDAVVKQIDAIIAAKEKEVLSV 185


>gi|269797920|ref|YP_003311820.1| ribosome recycling factor [Veillonella parvula DSM 2008]
 gi|294793662|ref|ZP_06758799.1| ribosome recycling factor [Veillonella sp. 3_1_44]
 gi|269094549|gb|ACZ24540.1| ribosome recycling factor [Veillonella parvula DSM 2008]
 gi|294455232|gb|EFG23604.1| ribosome recycling factor [Veillonella sp. 3_1_44]
          Length = 186

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  +DRM  +I  LK +  ++RTGR S ++LD V V+ YGS  P+NQVAN++V EPRM+
Sbjct: 7   LQQAEDRMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK M+ ++E+ I +S+LGLNP  +G  +R+ +P+ TEERR  +VKV H  AE +K
Sbjct: 67  VIAPWDKTMIGAIEKAILQSDLGLNPGNDGAQIRLSIPQLTEERRKEIVKVVHKKAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + LKK  K+   +ED      + IQK+TD+ +K ID     K+K+++  
Sbjct: 127 VAVRNIRRDVNEALKKEEKAKTITEDDAKDGLDQIQKLTDAKVKQIDELKVVKEKDVLEV 186


>gi|51473353|ref|YP_067110.1| ribosome recycling factor [Rickettsia typhi str. Wilmington]
 gi|60390689|sp|Q68XL4|RRF_RICTY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|51459665|gb|AAU03628.1| ribosome recycling factor [Rickettsia typhi str. Wilmington]
          Length = 186

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/175 (48%), Positives = 117/175 (66%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++++M   I  L  ++  LRTGR S + LD V VEAYGS VPL QVA+++  + R + V 
Sbjct: 10  LQEKMEKAIKVLGNELKGLRTGRASVNFLDSVTVEAYGSKVPLAQVASLSTPDARTINVQ 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           VWDK MV+SVE+GI  +NLGL    +GQ++R+P+P  TEERR   VK+AH Y E++KIS+
Sbjct: 70  VWDKSMVSSVEKGITIANLGLTHATDGQLIRLPIPSLTEERRKEFVKLAHKYGEETKISL 129

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRRDG++ LKK  K     +D   SL   +QK+TD     +DS  ++K+ EIM
Sbjct: 130 RNIRRDGIEELKKLEKDNIIVKDEYHSLSEQVQKLTDEYSSKVDSAIKQKEHEIM 184


>gi|114562451|ref|YP_749964.1| ribosome recycling factor [Shewanella frigidimarina NCIMB 400]
 gi|122300314|sp|Q085D9|RRF_SHEFN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114333744|gb|ABI71126.1| ribosome recycling factor [Shewanella frigidimarina NCIMB 400]
          Length = 185

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 82/177 (46%), Positives = 114/177 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + ++RM   +   K  M  +RTGR  PS+LD ++V  YGS  PL QVANV V + R L V
Sbjct: 8   DAQERMSKCVDATKNQMAKVRTGRAHPSLLDSIQVSCYGSMSPLKQVANVGVEDSRTLTV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +V+D+ MV +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV    AE  +I+
Sbjct: 68  NVFDRSMVQAVEKAIMSSDLGLNPMSAGATLRIPLPSLTEERRKDFIKVVRNEAENGRIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RN+RRD +  +KK  K+   +ED V   E+++QK TDS+IKNID     K+KE+M 
Sbjct: 128 IRNVRRDAISEVKKLEKAKACTEDDVRRSEDEVQKHTDSSIKNIDQILAAKEKELME 184


>gi|261344733|ref|ZP_05972377.1| ribosome recycling factor [Providencia rustigianii DSM 4541]
 gi|282567175|gb|EFB72710.1| ribosome recycling factor [Providencia rustigianii DSM 4541]
          Length = 185

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 82/179 (45%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + VE YGS  PL Q+ANVTV + R L 
Sbjct: 7   KDAQDRMEKSLEALKSQISKIRTGRASPSLLDGIVVEYYGSATPLRQLANVTVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +I
Sbjct: 67  ISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRGEAEQGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     ++DIQK+TDS IK +D    +K+ E+M F
Sbjct: 127 AIRNVRRDANDKVKALLKDKEISEDDERRSQDDIQKLTDSFIKKVDEALAQKEAELMEF 185


>gi|291533215|emb|CBL06328.1| ribosome recycling factor [Megamonas hypermegale ART12/1]
          Length = 185

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 84/175 (48%), Positives = 117/175 (66%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  T+S  K +  +LR GR +P++LD V VE YGS VP+NQV N++V EPRM+++  W
Sbjct: 11  ERMKKTLSAAKSEFASLRAGRATPALLDKVMVEYYGSLVPVNQVGNISVPEPRMILIQPW 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K M+  +E+ I  S+LGL+P  +G V+R+ +P+ TEERR  LVK  +  AE+SK+SVRN
Sbjct: 71  EKPMLHEIEKAITRSDLGLSPNNDGTVIRLNIPQLTEERRTDLVKTLNKRAEESKVSVRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IRRD  + +KK  K+   +ED     + DIQKI D  IK ID    EK+KEIM  
Sbjct: 131 IRRDANEAIKKLEKAKSITEDDAKKAQEDIQKIVDKYIKEIDIARAEKEKEIMEV 185


>gi|87199393|ref|YP_496650.1| ribosome recycling factor [Novosphingobium aromaticivorans DSM
           12444]
 gi|123489816|sp|Q2G8K7|RRF_NOVAD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|87135074|gb|ABD25816.1| ribosome recycling factor [Novosphingobium aromaticivorans DSM
           12444]
          Length = 185

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 108/164 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D  +++ RM   +  L+ D+  LRTGR + ++LD + VE YGSH+PL QVA V+  EPR+
Sbjct: 5   DKADLERRMKGAVESLRGDLSGLRTGRANTALLDPIVVEVYGSHMPLAQVATVSAPEPRL 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V VWDK  V  VE+ I  + LGLNPI +G  LR+P+P+ TEERR  L K+A  YAE +
Sbjct: 65  LSVQVWDKSNVTPVEKAIRSAGLGLNPISDGNTLRLPIPDLTEERRKELAKLASKYAENA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTI 169
           +I++RN+RRDGMD LK      + SED     E D+QK+TD  I
Sbjct: 125 RIAIRNVRRDGMDALKADESKKEISEDERKRAETDLQKLTDDII 168


>gi|188588017|ref|YP_001920606.1| ribosome recycling factor [Clostridium botulinum E3 str. Alaska
           E43]
 gi|251779568|ref|ZP_04822488.1| ribosome recycling factor [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|238689676|sp|B2V4F7|RRF_CLOBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|188498298|gb|ACD51434.1| ribosome recycling factor [Clostridium botulinum E3 str. Alaska
           E43]
 gi|243083883|gb|EES49773.1| ribosome recycling factor [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 185

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 125/180 (69%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++N +++M  T++ LK ++ T++ GR +PSMLD ++++ YGS  PL+Q AN++  EPR+L
Sbjct: 6   IKNAEEKMQKTVTVLKSELGTMKAGRANPSMLDKIQIDYYGSMCPLSQAANISSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K+++  +E+ I +S+LGLNP  +G ++R+ +PE TEE R  LVK      E+SK
Sbjct: 66  MITPWEKQLLKEIEKAILKSDLGLNPSNDGSIIRLVIPELTEETRKDLVKKVKKTGEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K G  SED V   E+D+QK TD+ IK ID    +K+KEI+  
Sbjct: 126 VAIRSIRRDANDKIKALKKDGDLSEDQVKKGEDDVQKKTDAIIKEIDKIIVDKEKEILAI 185


>gi|20807853|ref|NP_623024.1| ribosome recycling factor [Thermoanaerobacter tengcongensis MB4]
 gi|254479463|ref|ZP_05092790.1| ribosome recycling factor [Carboxydibrachium pacificum DSM 12653]
 gi|22001937|sp|Q8RA24|RRF_THETN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|20516416|gb|AAM24628.1| Ribosome recycling factor [Thermoanaerobacter tengcongensis MB4]
 gi|214034606|gb|EEB75353.1| ribosome recycling factor [Carboxydibrachium pacificum DSM 12653]
          Length = 184

 Score =  166 bits (420), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/180 (46%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  T++ LK ++  +R GR +P++LD + V  YG+  PLN++A +T  EPR+L
Sbjct: 5   LKDSEERMKKTLNVLKSELAAIRAGRANPALLDRITVNYYGTPTPLNRLATITAPEPRVL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD   +  +E+ I +S+LG+NP+ +G+VLR+ +PE TEERR  LVK+ H  AE+++
Sbjct: 65  VVQPWDVSQIGEIEKAIQKSDLGINPVSDGKVLRLVLPELTEERRKELVKLVHKKAEEAR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VR IRRD  D +KK  K G+ SED     E +IQK+TD  IK ID   E K+KEIM  
Sbjct: 125 IAVRQIRRDANDLVKKMEKDGEISEDERKRREEEIQKLTDKYIKEIDKMVEAKEKEIMEI 184


>gi|289662904|ref|ZP_06484485.1| ribosome recycling factor [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289670225|ref|ZP_06491300.1| ribosome recycling factor [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 185

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 83/184 (45%), Positives = 122/184 (66%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V
Sbjct: 2   LNQI--KQDAQTRMTKSIDALRHSLTTVRTGRASPALLDGIKVKAYGTDTPLNQVASISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R LV+S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H 
Sbjct: 60  SEGRSLVISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E SK+++RNIRRD    +K   K    +ED     E+DIQK+TD  IK++D   + K+
Sbjct: 120 EGEDSKVAIRNIRRDANQQVKDLLKDKAVTEDEARGAEDDIQKLTDKAIKDVDEVVKAKE 179

Query: 181 KEIM 184
           +E+M
Sbjct: 180 QELM 183


>gi|238754804|ref|ZP_04616155.1| Ribosome-recycling factor [Yersinia ruckeri ATCC 29473]
 gi|238706964|gb|EEP99330.1| Ribosome-recycling factor [Yersinia ruckeri ATCC 29473]
          Length = 185

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 116/174 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RMG  +   +  +  +RTGR SPS+LD ++V+ YGS  PL Q+ANV V + R L ++V+D
Sbjct: 12  RMGKCVDAFQNHISKIRTGRASPSILDGIQVDYYGSATPLRQLANVVVEDSRTLAITVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KVA   AE+ ++SVRN+
Sbjct: 72  RSLNAAVEKAIMSSDLGLNPSSAGSVIRVPLPPLTEERRKDLIKVARGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K    SED     ++D+QK+TDS IK ID+   EK+ E+M+F
Sbjct: 132 RRDTNDKVKALLKDKAISEDDDRRCQDDVQKMTDSYIKKIDTALAEKEAELMNF 185


>gi|294500908|ref|YP_003564608.1| ribosome recycling factor [Bacillus megaterium QM B1551]
 gi|295706254|ref|YP_003599329.1| ribosome recycling factor [Bacillus megaterium DSM 319]
 gi|294350845|gb|ADE71174.1| ribosome recycling factor [Bacillus megaterium QM B1551]
 gi|294803913|gb|ADF40979.1| ribosome recycling factor [Bacillus megaterium DSM 319]
          Length = 185

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/178 (44%), Positives = 118/178 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQN K+RM   I    +++ ++R GR S S+LD V VE YG+  P+NQ+A V+V E RML
Sbjct: 6   LQNAKERMEKAIQSFSRELASIRAGRASASLLDRVTVEYYGAPTPINQLAQVSVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  VE+ I +S+LGL P  +G ++R+ +P  TEERR  LVK+   YAE++K
Sbjct: 66  VIQPYDKSQIGEVEKAILKSDLGLTPTSDGTIIRLSIPALTEERRRELVKMVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RRD  D  KK  K G+ +ED +    +DIQK+TD  I  +D   ++K++EIM
Sbjct: 126 VAVRNVRRDANDDFKKLEKKGEITEDDLRGYSDDIQKLTDDHIVKVDKVAKDKEEEIM 183


>gi|58581596|ref|YP_200612.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623520|ref|YP_450892.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|166712735|ref|ZP_02243942.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzicola BLS256]
 gi|188577166|ref|YP_001914095.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|62900777|sp|Q5H1E4|RRF_XANOR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123522271|sp|Q2P4A9|RRF_XANOM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689544|sp|B2SR02|RRF_XANOP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|58426190|gb|AAW75227.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367460|dbj|BAE68618.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521618|gb|ACD59563.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 185

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/177 (45%), Positives = 118/177 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQTRMTKSIDALRHSLTTVRTGRASPALLDGIKVKAYGTDTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H   E SK+
Sbjct: 67  ISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDSKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD    +K   K    +ED     E+DIQK+TD  IK++D   + K++E+M
Sbjct: 127 AIRNIRRDANQQVKDLLKDKAVTEDEARGAEDDIQKLTDKAIKDVDEVVKAKEQELM 183


>gi|307129823|ref|YP_003881839.1| ribosome recycling factor [Dickeya dadantii 3937]
 gi|306527352|gb|ADM97282.1| ribosome recycling factor [Dickeya dadantii 3937]
          Length = 185

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/174 (47%), Positives = 114/174 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YGS  PL Q+AN+ V + R L V+V+D
Sbjct: 12  RMDKCVEAFKNQISKVRTGRASPSLLDGIHVEYYGSATPLRQLANIVVEDTRTLAVTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+KV    AE+S+++VRN+
Sbjct: 72  RTLGPAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQSRVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D LK   K    SED     ++D+QK+TDS IK ID+   EK+KE+M F
Sbjct: 132 RRDANDKLKAQLKEKTISEDDERRSQDDVQKLTDSFIKKIDAVLAEKEKELMDF 185


>gi|288553032|ref|YP_003424967.1| ribosome recycling factor [Bacillus pseudofirmus OF4]
 gi|288544192|gb|ADC48075.1| ribosome recycling factor [Bacillus pseudofirmus OF4]
          Length = 185

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/179 (44%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q+ K+RM   I  L +++  LR GR +P++LD V VE YG+  PLNQ+A +TV E R+L
Sbjct: 6   MQDAKERMTKAIESLNRELAKLRAGRANPAILDRVTVEYYGAETPLNQLATITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +  +ER I +++LGL P  +G V+RI +P  TEERR  LVK+    AE+ K
Sbjct: 66  MIQPFDKTSMNDIERAIQKADLGLTPSNDGTVIRIAIPPLTEERRRELVKLVKKSAEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD  D LKK +K G+ +ED +    +D+QK+TD  I +ID+  ++K+KEIM 
Sbjct: 126 VAVRNVRRDANDDLKKLQKDGEMTEDELRRYTDDVQKLTDKHISDIDAVADKKEKEIME 184


>gi|51892632|ref|YP_075323.1| ribosome recycling factor [Symbiobacterium thermophilum IAM 14863]
 gi|60390686|sp|Q67PB4|RRF_SYMTH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|51856321|dbj|BAD40479.1| ribosome recycling factor [Symbiobacterium thermophilum IAM 14863]
          Length = 185

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ ++RM   +   ++++  +R  R +P++LD V+VEAYGS VP+N VA + V +PR L
Sbjct: 6   IKDAEERMKKAVEVFRQELAGMRANRATPALLDKVRVEAYGSEVPVNNVATIEVPDPRTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD+ ++ ++ER I+ S+LGLNP  +GQV+R+ +P  TEERR  LVKV     E+ +
Sbjct: 66  VIKPWDRSLIKAIERAINASDLGLNPTNDGQVIRLSIPPMTEERRRELVKVVAKRTEEQR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  + +KK  K    SED     ++++QK+TD  IK +D     K+KEIM  
Sbjct: 126 VAIRNIRRDANEQIKKLEKDKAVSEDESKRAQDEVQKLTDKYIKEVDQLMAAKEKEIMEV 185


>gi|42527846|ref|NP_972944.1| ribosome recycling factor [Treponema denticola ATCC 35405]
 gi|47116998|sp|P61310|RRF_TREDE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|41818674|gb|AAS12863.1| ribosome recycling factor [Treponema denticola ATCC 35405]
          Length = 185

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 119/178 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N +++M  T+  LK++   LRTGR S ++ D ++V  YG   PLNQ+AN+++ E R++V
Sbjct: 7   KNCEEKMKKTVVALKEEFNMLRTGRASSALFDKIRVNCYGESTPLNQLANISIPEARLVV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK ++  +E+ + +++L +NP  +G+V+RI +P  TE+RR  L K A   AE S++
Sbjct: 67  IQPWDKGLLVEIEKAVLQADLSVNPTNDGKVIRIAIPPLTEDRRKDLAKKAKTIAENSRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           SVRNIRRDG+D  KK +K GK SED + + E+  QK TD+ I  I+   E K+KEIM 
Sbjct: 127 SVRNIRRDGIDEAKKLQKDGKISEDQLKTAEDAFQKSTDAYIAEINKVLEAKEKEIME 184


>gi|268590529|ref|ZP_06124750.1| ribosome recycling factor [Providencia rettgeri DSM 1131]
 gi|291314115|gb|EFE54568.1| ribosome recycling factor [Providencia rettgeri DSM 1131]
          Length = 185

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/179 (45%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++   K  +  +RTGR SPS+LD + VE YGS  PL Q+ANVTV + R L 
Sbjct: 7   KDAQDRMEKSLEAFKSQISKVRTGRASPSLLDGITVEYYGSATPLRQLANVTVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +I
Sbjct: 67  ISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGDAEQGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++DIQK+TDS IK +D    +K+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKDKEISEDDERRSQDDIQKLTDSYIKKVDEALAQKEAELMEF 185


>gi|294624553|ref|ZP_06703230.1| ribosome releasing factor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601159|gb|EFF45219.1| ribosome releasing factor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 185

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/177 (45%), Positives = 118/177 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQTRMTKSIDALRHSLTTIRTGRASPALLDGIKVKAYGADTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H   E SK+
Sbjct: 67  ISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDSKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD    +K   K    +ED     E+DIQK+TD  IK++D   + K++E+M
Sbjct: 127 AIRNIRRDANQQVKDLLKDKAVTEDEARGAEDDIQKLTDKAIKDVDEVVKGKEQELM 183


>gi|183597594|ref|ZP_02959087.1| hypothetical protein PROSTU_00876 [Providencia stuartii ATCC 25827]
 gi|188023090|gb|EDU61130.1| hypothetical protein PROSTU_00876 [Providencia stuartii ATCC 25827]
          Length = 185

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/179 (45%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + V+ YG+  PL Q+ANVTV + R L 
Sbjct: 7   KDAQDRMEKSVEALKNQISKVRTGRASPSLLDGIMVDYYGAATPLRQLANVTVEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  ISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  D +K   K  + SED     ++DIQK+TD  IK +D    +K+ E+M F
Sbjct: 127 AVRNIRRDANDKIKALLKDKEISEDEERRSQDDIQKLTDGYIKKVDEALAQKEAELMEF 185


>gi|18310679|ref|NP_562613.1| ribosome recycling factor [Clostridium perfringens str. 13]
 gi|110800605|ref|YP_696384.1| ribosome recycling factor [Clostridium perfringens ATCC 13124]
 gi|110802993|ref|YP_698984.1| ribosome recycling factor [Clostridium perfringens SM101]
 gi|168208114|ref|ZP_02634119.1| ribosome recycling factor [Clostridium perfringens E str. JGS1987]
 gi|168211415|ref|ZP_02637040.1| ribosome recycling factor [Clostridium perfringens B str. ATCC
           3626]
 gi|168214470|ref|ZP_02640095.1| ribosome recycling factor [Clostridium perfringens CPE str. F4969]
 gi|168216984|ref|ZP_02642609.1| ribosome recycling factor [Clostridium perfringens NCTC 8239]
 gi|169342698|ref|ZP_02863739.1| ribosome recycling factor [Clostridium perfringens C str. JGS1495]
 gi|182627138|ref|ZP_02954853.1| ribosome recycling factor [Clostridium perfringens D str. JGS1721]
 gi|20141648|sp|Q46293|RRF_CLOPE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122956643|sp|Q0SSC3|RRF_CLOPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123344670|sp|Q0TPQ6|RRF_CLOP1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|18145360|dbj|BAB81403.1| ribosome recycling factor [Clostridium perfringens str. 13]
 gi|110675252|gb|ABG84239.1| ribosome recycling factor [Clostridium perfringens ATCC 13124]
 gi|110683494|gb|ABG86864.1| ribosome recycling factor [Clostridium perfringens SM101]
 gi|169299204|gb|EDS81274.1| ribosome recycling factor [Clostridium perfringens C str. JGS1495]
 gi|170660605|gb|EDT13288.1| ribosome recycling factor [Clostridium perfringens E str. JGS1987]
 gi|170710572|gb|EDT22754.1| ribosome recycling factor [Clostridium perfringens B str. ATCC
           3626]
 gi|170714030|gb|EDT26212.1| ribosome recycling factor [Clostridium perfringens CPE str. F4969]
 gi|177907475|gb|EDT70141.1| ribosome recycling factor [Clostridium perfringens D str. JGS1721]
 gi|182380949|gb|EDT78428.1| ribosome recycling factor [Clostridium perfringens NCTC 8239]
          Length = 185

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 78/175 (44%), Positives = 120/175 (68%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  TI+ L  ++ T++ GR +P+MLD ++VE YGS  PLNQVANV+  EPR+LV++ W
Sbjct: 11  EKMNKTINSLNSELATMKAGRANPTMLDRIQVEYYGSMCPLNQVANVSSPEPRLLVITPW 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K M+  +E+ I +S+LG+NP  +G ++R+ VPE TEE R  LVK      E++K+++R+
Sbjct: 71  EKPMLKEIEKAILKSDLGINPNNDGTIIRLLVPELTEETRKNLVKNVKKVGEQAKVAIRS 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IR+D  D +K  +K G  +ED +   E+DIQK+TD  +K ID+    K+KEIM  
Sbjct: 131 IRKDANDKVKNFKKEGTITEDEMKKGEDDIQKVTDKFVKEIDTIVAAKEKEIMSI 185


>gi|157962701|ref|YP_001502735.1| ribosome recycling factor [Shewanella pealeana ATCC 700345]
 gi|189044076|sp|A8H6L3|RRF_SHEPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157847701|gb|ABV88200.1| ribosome recycling factor [Shewanella pealeana ATCC 700345]
          Length = 185

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 115/174 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  M  +RTGR  PS+LD ++V  YGS  PL QVA+V++ + R L VSV+D
Sbjct: 12  RMDKCVESTKTQMAKVRTGRAHPSLLDTIQVPYYGSLTPLKQVASVSIGDARTLTVSVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M+A+VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KV  A AE  +I++RN+
Sbjct: 72  RTMIAAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRIAIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD   ++K+  K  + +ED V   E+D+QK+TD+ IK ID     K+KE+M F
Sbjct: 132 RRDANSNVKELEKEKECTEDDVRRSEDDVQKLTDAHIKLIDEILAAKEKELMEF 185


>gi|325923975|ref|ZP_08185564.1| ribosome recycling factor [Xanthomonas gardneri ATCC 19865]
 gi|325545558|gb|EGD16823.1| ribosome recycling factor [Xanthomonas gardneri ATCC 19865]
          Length = 185

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 84/184 (45%), Positives = 122/184 (66%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   Q+   RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V
Sbjct: 2   LNQI--KQDALTRMTKSIDALRHSLTTVRTGRASPALLDNIKVKAYGTDTPLNQVASISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R LV+S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H 
Sbjct: 60  SEGRSLVISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E SK+++RNIRRD    +K   K    +ED   S E+DIQK+TD  IK++D   + K+
Sbjct: 120 EGEDSKVAIRNIRRDANQQVKDLLKDKAVTEDEARSAEDDIQKLTDKAIKDVDEVVKGKE 179

Query: 181 KEIM 184
           +E+M
Sbjct: 180 QELM 183


>gi|120599549|ref|YP_964123.1| ribosome recycling factor [Shewanella sp. W3-18-1]
 gi|146292454|ref|YP_001182878.1| ribosome recycling factor [Shewanella putrefaciens CN-32]
 gi|166231227|sp|A4Y546|RRF_SHEPC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231510|sp|A1RLM4|RRF_SHESW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120559642|gb|ABM25569.1| ribosome recycling factor [Shewanella sp. W3-18-1]
 gi|145564144|gb|ABP75079.1| ribosome recycling factor [Shewanella putrefaciens CN-32]
 gi|319425756|gb|ADV53830.1| ribosome recycling factor [Shewanella putrefaciens 200]
          Length = 185

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 81/183 (44%), Positives = 117/183 (63%), Gaps = 4/183 (2%)

Query: 7   LQNIK----DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           ++NIK    +RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV V +
Sbjct: 2   IENIKKDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVED 61

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R L V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV  A A
Sbjct: 62  SRTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEA 121

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E  ++++RN+RRD +  +KK  K+ + +ED V   E+D+QK TD+ IK +D     K+ E
Sbjct: 122 EGGRVAIRNVRRDAISEVKKLEKAKECTEDDVRRFEDDVQKFTDAHIKKVDEILAAKEIE 181

Query: 183 IMH 185
           +M 
Sbjct: 182 LME 184


>gi|302874652|ref|YP_003843285.1| ribosome recycling factor [Clostridium cellulovorans 743B]
 gi|307690735|ref|ZP_07633181.1| ribosome recycling factor [Clostridium cellulovorans 743B]
 gi|302577509|gb|ADL51521.1| ribosome recycling factor [Clostridium cellulovorans 743B]
          Length = 185

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N +++M  T++ LKKD+ TL+ G+ +P+MLD ++VE YG+  P+NQVAN++  EPR+L
Sbjct: 6   ISNAEEKMKKTVTVLKKDLNTLKAGKANPTMLDRIEVEYYGTMTPINQVANISAPEPRIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  + ++E+ I  S+LG+NP  +G V+R+ VPE TEE R  + K    + E +K
Sbjct: 66  LIQPWDKGSLKAIEKAILISDLGINPNSDGNVIRLIVPELTEETRRDITKKVKKFGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR+IRRD  D +K  +K    +ED + S E+++QK TD+ +K IDS   +K+KE+M  
Sbjct: 126 VAVRSIRRDANDKIKNLKKENTITEDEMKSAEDNVQKKTDAFVKEIDSIISDKEKEVMSL 185


>gi|150016075|ref|YP_001308329.1| ribosome recycling factor [Clostridium beijerinckii NCIMB 8052]
 gi|189044050|sp|A6LSP3|RRF_CLOB8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149902540|gb|ABR33373.1| ribosome recycling factor [Clostridium beijerinckii NCIMB 8052]
          Length = 185

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +QN +++M  TIS LK D+ T++ GR +P+MLD + VE YGS  PL+QVANV+  EPR+L
Sbjct: 6   IQNAEEKMKKTISVLKSDLSTMKAGRANPTMLDRIHVEYYGSMCPLSQVANVSAPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K ++  +E+ I +S+LGLNP  +G ++R+ +PE TEE R  LVK      E++K
Sbjct: 66  MITPWEKPLLKEIEKAILKSDLGLNPSSDGSIIRLVIPELTEETRKTLVKNVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IR+   D +K  +K    SED V   E+++QK TD+ +K IDS    K+KE++  
Sbjct: 126 VAIRSIRKTANDKIKALKKDEDLSEDQVKKAEDEVQKKTDAVVKEIDSIIAAKEKEVLSV 185


>gi|257458508|ref|ZP_05623645.1| ribosome recycling factor [Treponema vincentii ATCC 35580]
 gi|257444105|gb|EEV19211.1| ribosome recycling factor [Treponema vincentii ATCC 35580]
          Length = 184

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 116/174 (66%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  +I+ LK +   LRTGR S S+ D ++V++YG   PLNQVA +++ E R++V+  W
Sbjct: 10  EKMKKSIAALKDEFNALRTGRASTSLFDKIRVDSYGQPTPLNQVATISIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I +S L LNP  +G+++RI +P  TEERR  L K A  +AE+ ++++RN
Sbjct: 70  DKSLLGEIEKAILKSELSLNPANDGKLIRIAIPPLTEERRKELAKQAKNFAEQCRVAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IRRDG+D  KK +K G  SED + + E   QK TD+ I +I+    EK+KEIM 
Sbjct: 130 IRRDGIDEAKKQQKDGLLSEDALKTAEEKFQKATDAHINDINKLLAEKEKEIME 183


>gi|68536249|ref|YP_250954.1| ribosome recycling factor [Corynebacterium jeikeium K411]
 gi|260578949|ref|ZP_05846852.1| ribosome recycling factor [Corynebacterium jeikeium ATCC 43734]
 gi|123650872|sp|Q4JV21|RRF_CORJK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|68263848|emb|CAI37336.1| frr [Corynebacterium jeikeium K411]
 gi|258602923|gb|EEW16197.1| ribosome recycling factor [Corynebacterium jeikeium ATCC 43734]
          Length = 185

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 121/175 (69%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM  ++   ++D+ T+RTGR +PSM + V  E YG   P+ Q+A ++V EPRML++  
Sbjct: 10  EERMTSSVEHAREDLTTIRTGRANPSMFNGVVAEYYGVPTPITQMATISVPEPRMLLIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +++  + ++E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VKVA +  E +KI++R
Sbjct: 70  YEQSTMDAIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKEMVKVAKSKGEDAKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR GM+ L K +K G+A ED V + E D++KIT S ++ +DS  E K+KE++ 
Sbjct: 130 NIRRKGMEQLGKIQKDGEAGEDEVRAAEKDLEKITHSYVEQVDSLVEAKEKELLE 184


>gi|147677590|ref|YP_001211805.1| ribosome recycling factor [Pelotomaculum thermopropionicum SI]
 gi|189044063|sp|A5D2T8|RRF_PELTS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146273687|dbj|BAF59436.1| ribosome recycling factor [Pelotomaculum thermopropionicum SI]
          Length = 185

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 77/172 (44%), Positives = 117/172 (68%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  TI  +KK+  +LR GR +P++LD V V  YG+  P+NQ+AN++V E R+LVV  WDK
Sbjct: 13  MKKTIEVVKKEFASLRAGRATPALLDKVMVNYYGTPTPVNQLANISVPEARLLVVQPWDK 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +ER I +S+LG+ P  +G V+R+ +P+ T+ERR  L+KV    AE+ ++++RNIR
Sbjct: 73  TVLPEIERAILKSDLGITPASDGNVIRLAIPQLTQERRAELMKVIKKKAEEGRVAIRNIR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RD  + LK  +K GK SED +   ++++QK+TD  IK IDS    K++EIM 
Sbjct: 133 RDTNEQLKSQQKDGKMSEDELKRSQDEVQKLTDRYIKEIDSLLSTKEQEIMQ 184


>gi|21230827|ref|NP_636744.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769174|ref|YP_243936.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188992321|ref|YP_001904331.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
           str. B100]
 gi|24418655|sp|Q8PAV6|RRF_XANCP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|81304866|sp|Q4USQ7|RRF_XANC8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229890170|sp|B0RW69|RRF_XANCB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21112430|gb|AAM40668.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574506|gb|AAY49916.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167734081|emb|CAP52287.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 185

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 82/184 (44%), Positives = 123/184 (66%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V
Sbjct: 2   LNQI--KQDAQTRMTKSIDALRHSLTTVRTGRASPALLDNIKVKAYGTDTPLNQVASISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R LV+S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H 
Sbjct: 60  SEGRSLVISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+++RNIRRD    +K   K  + +ED     E+DIQK+TD  IK++D   + K+
Sbjct: 120 EGEDAKVAIRNIRRDANQQVKDLLKDKQVTEDEARGAEDDIQKLTDKAIKDVDEVVKGKE 179

Query: 181 KEIM 184
           +E+M
Sbjct: 180 QELM 183


>gi|295100640|emb|CBK98185.1| ribosome recycling factor [Faecalibacterium prausnitzii L2-6]
          Length = 184

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 118/175 (67%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            +D+M   +  L++++ T+R GR +P +LD V V+ YGS  P+ QVA+V V E R L ++
Sbjct: 8   FEDKMKSAVEHLERELKTVRAGRANPGVLDKVTVDYYGSPTPIQQVASVAVSEARTLTIT 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WD+ ++ ++ + I  S++G+NPI +GQ +R+  P  TEERR  L K      E++K++V
Sbjct: 68  PWDRTLLRAISKAILASDVGINPIDDGQTIRLNFPAPTEERRKQLAKEVSKMGEEAKVAV 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RN+RRD MD  K  +K+G+ +ED   ++E D+QK+TD  +KNID+  EEK+KEIM
Sbjct: 128 RNVRRDAMDKAKAMKKAGELTEDTQKTMEEDVQKLTDKYVKNIDAAVEEKQKEIM 182


>gi|251790742|ref|YP_003005463.1| ribosome recycling factor [Dickeya zeae Ech1591]
 gi|247539363|gb|ACT07984.1| ribosome recycling factor [Dickeya zeae Ech1591]
          Length = 185

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 82/174 (47%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YGS  PL Q+AN+ V + R L V+V+D
Sbjct: 12  RMDKCVEAFKNQISKVRTGRASPSLLDGIHVEYYGSSTPLRQLANIVVEDSRTLAVTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RTLGPAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D LK   K    SED     ++DIQK+TD  IK ID+   EK+KE+M F
Sbjct: 132 RRDANDKLKAQLKDKTISEDEERRAQDDIQKLTDGFIKKIDAALAEKEKELMDF 185


>gi|315186476|gb|EFU20236.1| ribosome recycling factor [Spirochaeta thermophila DSM 6578]
          Length = 184

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 115/173 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  LK  + T+RTGR +P++ + + V  YG   PLNQVA+++  EPR++V+  WD
Sbjct: 11  RMKKSVHALKDQLATIRTGRATPALFEKITVNYYGQQTPLNQVASISAPEPRLVVIQPWD 70

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  +E+ I  S+L LNP+ +G+VLRI +P  TEERR   +K+A   AE+S++++RNI
Sbjct: 71  KSVLQEIEKAIQSSDLSLNPVNDGKVLRINIPPLTEERRKEYIKLAKNVAEQSRVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD  + LKK+ K G+ SED     E +IQK+T   I  I++  E K+KEIM 
Sbjct: 131 RRDANEALKKAEKEGRLSEDERKRGEEEIQKLTQKYIDEINNLLEAKEKEIME 183


>gi|163750354|ref|ZP_02157594.1| ribosome recycling factor [Shewanella benthica KT99]
 gi|161329844|gb|EDQ00830.1| ribosome recycling factor [Shewanella benthica KT99]
          Length = 185

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 85/172 (49%), Positives = 109/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   I   K  M  +RTGR  PS+LD +KV  YGS  PL QV NVT+ + R L VSV+D
Sbjct: 12  RMAKCIEATKTQMAKVRTGRAHPSLLDSIKVSYYGSMTPLKQVGNVTIEDSRTLAVSVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             M+ +VE+ I  S+LGLNP+  G V+RIP+P  TEERR  L+KV  A AE S+ISVRN+
Sbjct: 72  VSMIKAVEKAIMTSDLGLNPMSAGAVIRIPLPSLTEERRKDLIKVVRAEAENSRISVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD    +K   K  + +ED V   E++IQK TD+ IK ID     K+ E+M
Sbjct: 132 RRDANSDVKVLEKEKECTEDDVHRTEDEIQKFTDAHIKQIDDLLSAKEAELM 183


>gi|307718990|ref|YP_003874522.1| ribosome recycling factor [Spirochaeta thermophila DSM 6192]
 gi|306532715|gb|ADN02249.1| ribosome recycling factor [Spirochaeta thermophila DSM 6192]
          Length = 184

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 115/173 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  LK  + T+RTGR +P++ + + V  YG   PLNQVA+++  EPR++V+  WD
Sbjct: 11  RMKKSVHALKDQLATIRTGRATPALFEKITVNYYGQQTPLNQVASISAPEPRLVVIQPWD 70

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  +E+ I  S+L LNP+ +G+VLRI +P  TEERR   +K+A   AE+S++++RNI
Sbjct: 71  KSVLQEIEKAIQSSDLSLNPVNDGKVLRINIPPLTEERRKEYIKLAKNVAEQSRVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD  + LKK+ K G+ SED     E +IQK+T   I  I++  E K+KEIM 
Sbjct: 131 RRDANEALKKAEKEGQLSEDERKRGEEEIQKLTQKYIDEINNLLEAKEKEIME 183


>gi|323705413|ref|ZP_08116988.1| ribosome recycling factor [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535315|gb|EGB25091.1| ribosome recycling factor [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 184

 Score =  164 bits (416), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +++M  +I+ LK ++M++R GR +P++LD + ++ YG+  P+N++A +T  EP+++
Sbjct: 5   LKSTEEKMKKSIAVLKNELMSIRAGRANPALLDRISIDYYGTMTPINKLATITAPEPKII 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD   ++ +E+ I +S+L +NP  +G+++R+  P+ TEERR  LVK+ H   E++K
Sbjct: 65  IIQPWDTSKISEIEKAIQKSDLNINPTSDGKIIRLVFPDLTEERRKELVKLVHKKGEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRRD  D +KK  K+G+ SED     E ++QK+TD  IK ID   E+K+KEIM  
Sbjct: 125 VAVRQIRRDANDAIKKMDKNGEISEDEKLKSEENVQKLTDKYIKEIDKILEQKEKEIMEI 184


>gi|90580974|ref|ZP_01236775.1| ribosome releasing factor [Vibrio angustum S14]
 gi|90437852|gb|EAS63042.1| ribosome releasing factor [Vibrio angustum S14]
          Length = 185

 Score =  164 bits (416), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/179 (45%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  ++  L+  ++ +RTGR  PS+LD + VE YG++ PLNQVANV   + R L 
Sbjct: 7   QDAQTRMEKSVDALRNQLVKIRTGRAHPSLLDTIHVEYYGANTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+  A AE+ ++
Sbjct: 67  ITVFDRELAPKVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    +K   K  + SED     +++IQK+TD  IKNID+  E K+KE+M  
Sbjct: 127 AVRNIRRDANATVKGLLKDKEISEDDDRRAQDEIQKLTDDAIKNIDAVLEVKEKELMEV 185


>gi|257470869|ref|ZP_05634959.1| ribosome recycling factor (RRF) [Fusobacterium ulcerans ATCC 49185]
 gi|317065071|ref|ZP_07929556.1| ribosome Recycling Factor [Fusobacterium ulcerans ATCC 49185]
 gi|313690747|gb|EFS27582.1| ribosome Recycling Factor [Fusobacterium ulcerans ATCC 49185]
          Length = 188

 Score =  164 bits (416), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 85/179 (47%), Positives = 121/179 (67%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++  ++MG  I   K    ++R GR S SMLD VKVE YGS +PLNQV +V+  E R+L
Sbjct: 7   VKSCNEKMGKAIEATKHKFTSIRAGRASVSMLDSVKVEQYGSDMPLNQVGSVSAPEARLL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ I  +NLGL P  +G+V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 67  VIDPWDKSLISKIEKAIMAANLGLTPNNDGKVIRLVMPELTAERRKEYVKMAKTEAENGK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKA--SEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VRNIR+DG + LKK  K  ++  SED V +LE +IQK+TD+ IK ID  F +K+KEI
Sbjct: 127 VAVRNIRKDGNNDLKKLSKDKESPISEDEVKTLEAEIQKLTDAHIKAIDDLFAKKEKEI 185


>gi|300724792|ref|YP_003714117.1| ribosome releasing factor [Xenorhabdus nematophila ATCC 19061]
 gi|297631334|emb|CBJ92029.1| ribosome releasing factor [Xenorhabdus nematophila ATCC 19061]
          Length = 185

 Score =  164 bits (416), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 80/179 (44%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + VE YGS  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSVEALKNQISKVRTGRASPSLLDGISVEYYGSATPLRQIANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M A+VE+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  ITVFDRSMTAAVEKAIMASDLGLNPASAGTIIRVPLPPLTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  D +K   K  + SED     +++IQK+TDS IK +D     K+ E+M F
Sbjct: 127 SIRNIRRDANDKVKALLKEKEISEDEERRSQDEIQKLTDSFIKKVDEALANKETELMDF 185


>gi|91792914|ref|YP_562565.1| ribosome recycling factor [Shewanella denitrificans OS217]
 gi|123061015|sp|Q12NY4|RRF_SHEDO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91714916|gb|ABE54842.1| ribosome recycling factor [Shewanella denitrificans OS217]
          Length = 185

 Score =  164 bits (416), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 80/179 (44%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PL QVANV + + R L
Sbjct: 6   LLDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGAMSPLKQVANVGIEDSRTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+V+D+ MV +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV    AE  +
Sbjct: 66  SVTVFDRSMVQAVEKAIMTSDLGLNPMTAGATLRIPLPALTEERRKDFIKVVRNEAENGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RN+RRD +  +KK  K+ + +ED V   E+++QK TD+ IKN+D     K+KE+M 
Sbjct: 126 IAIRNVRRDAISEVKKLEKAKECTEDDVRRSEDEVQKYTDAHIKNVDEVLTAKEKELME 184


>gi|167624892|ref|YP_001675186.1| ribosome recycling factor [Shewanella halifaxensis HAW-EB4]
 gi|189044075|sp|B0TP80|RRF_SHEHH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167354914|gb|ABZ77527.1| ribosome recycling factor [Shewanella halifaxensis HAW-EB4]
          Length = 185

 Score =  164 bits (416), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 80/174 (45%), Positives = 115/174 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  M  +RTGR  PS+LD ++V  YGS  PL QVA+V++ + R L VSV+D
Sbjct: 12  RMDKCVESTKTQMAKVRTGRAHPSLLDTIQVPYYGSLTPLKQVASVSIGDARTLTVSVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M+A+VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KV  A AE  +I++RN+
Sbjct: 72  RTMIAAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRIAIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD   ++K+  K  + +ED V   E+D+QK+TD+ IK +D     K+KE+M F
Sbjct: 132 RRDANSNVKELEKEKECTEDDVRRSEDDVQKLTDAHIKLVDDVLAAKEKELMEF 185


>gi|89075417|ref|ZP_01161834.1| ribosome releasing factor [Photobacterium sp. SKA34]
 gi|89048833|gb|EAR54403.1| ribosome releasing factor [Photobacterium sp. SKA34]
          Length = 185

 Score =  164 bits (416), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 81/179 (45%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  ++  L+  ++ +RTGR  PS+LD + VE YG++ PLNQVANV   + R L 
Sbjct: 7   QDAQTRMEKSVDALRNQLVKIRTGRAHPSLLDTIHVEYYGANTPLNQVANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+  A AE+ ++
Sbjct: 67  ITVFDRELAPKVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    +K   K  + SED     +++IQK+TD  IKNID+  E K+KE+M  
Sbjct: 127 AVRNIRRDANATVKGLLKDKEISEDDDRRAQDEIQKLTDDAIKNIDAVLEVKEKELMEV 185


>gi|167037634|ref|YP_001665212.1| ribosome recycling factor [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040295|ref|YP_001663280.1| ribosome recycling factor [Thermoanaerobacter sp. X514]
 gi|256750775|ref|ZP_05491660.1| ribosome recycling factor [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914379|ref|ZP_07131695.1| ribosome recycling factor [Thermoanaerobacter sp. X561]
 gi|307724385|ref|YP_003904136.1| ribosome recycling factor [Thermoanaerobacter sp. X513]
 gi|320116049|ref|YP_004186208.1| ribosome recycling factor [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|238687580|sp|B0K1P6|RRF_THEPX RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238687714|sp|B0K9R3|RRF_THEP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166854535|gb|ABY92944.1| ribosome recycling factor [Thermoanaerobacter sp. X514]
 gi|166856468|gb|ABY94876.1| ribosome recycling factor [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256750358|gb|EEU63377.1| ribosome recycling factor [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889314|gb|EFK84460.1| ribosome recycling factor [Thermoanaerobacter sp. X561]
 gi|307581446|gb|ADN54845.1| ribosome recycling factor [Thermoanaerobacter sp. X513]
 gi|319929140|gb|ADV79825.1| ribosome recycling factor [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 184

 Score =  164 bits (415), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M  ++S LK ++  +R GR +P++LD + V+ YG+  PLN++A +T  EPR+L
Sbjct: 5   LKASEEKMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD   ++ +E+ I +S+LG+NP+ +G+VLR+  PE TEERR  LVK+ H  AE++K
Sbjct: 65  VVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRRD  D +KK  K+G+ SED     E +IQK+TD  IK ID   E K+KEIM  
Sbjct: 125 VAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKVVEAKEKEIMEI 184


>gi|310779561|ref|YP_003967894.1| ribosome recycling factor [Ilyobacter polytropus DSM 2926]
 gi|309748884|gb|ADO83546.1| ribosome recycling factor [Ilyobacter polytropus DSM 2926]
          Length = 186

 Score =  164 bits (415), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 80/177 (45%), Positives = 118/177 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + +++M   I   K    ++R GR + SMLD +KVE YGS +PLNQVANV+  E R+L
Sbjct: 7   MNDCREKMDKAIESTKHKFASIRAGRANVSMLDGIKVEQYGSEMPLNQVANVSAPEARLL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  +E+ I  SNLGL P  +G+V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 67  VIDPWDKSIIQKIEKTIMLSNLGLTPNNDGKVIRLQIPELTAERRKEYVKLAKTEAENGK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I++RNIR+D  +HL++  K G  ++D + S E+D QKITD+ IK +D   ++K+KEI
Sbjct: 127 IAIRNIRKDANNHLRRLEKDGDITQDELKSFEDDTQKITDNHIKLVDELLKKKEKEI 183


>gi|313888244|ref|ZP_07821915.1| ribosome recycling factor [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845647|gb|EFR33037.1| ribosome recycling factor [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 185

 Score =  164 bits (415), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 121/179 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + RM  +I  L + + ++R GR + S+LD + V+ YG   PLNQVA+++  E R+L 
Sbjct: 7   KNTESRMSKSIDSLTESLQSIRAGRANTSLLDRIYVDYYGQQSPLNQVASLSAPEARLLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD  ++  +E+ I +S+LG+ P  +G+++R+ +P+ TEERR  L K+   YAE++K+
Sbjct: 67  IQPWDATLIPEIEKAIQKSDLGITPSNDGKIIRLVIPQLTEERRKDLTKLVGKYAEEAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD M+ +KK+ K+ + SED   + E DIQK+TD  IK++DS   +K+KE+M  
Sbjct: 127 SIRNIRRDAMEDIKKAEKAKEISEDDRKTYEEDIQKLTDKYIKDVDSVAADKEKELMEI 185


>gi|15614987|ref|NP_243290.1| ribosome recycling factor [Bacillus halodurans C-125]
 gi|14195173|sp|Q9KA66|RRF_BACHD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|10175044|dbj|BAB06143.1| ribosome recycling factor [Bacillus halodurans C-125]
          Length = 185

 Score =  164 bits (414), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 80/179 (44%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + RM      L +++  LR GR +P+MLD + VE YG+  PLNQ+A ++V E R+L
Sbjct: 6   LNDAEQRMTKATEALGRELAKLRAGRANPAMLDRITVEYYGAETPLNQLATISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  ++ +ER I +S+LGL P  +G V+RI +P  TEERR  L K+    AE++K
Sbjct: 66  VIQPFDKSSISDIERAIQKSDLGLTPSNDGTVIRITIPPLTEERRRDLTKLVKKSAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD  D LKK +K G+ +ED +  +  D+QK+TD  I+ ID   E K+KEIM 
Sbjct: 126 VAVRNIRRDANDDLKKRQKDGELTEDDLRRVTEDVQKLTDKYIEQIDQKAEAKEKEIME 184


>gi|322382357|ref|ZP_08056264.1| ribosome recycling factor-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153710|gb|EFX46085.1| ribosome recycling factor-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 180

 Score =  164 bits (414), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 119/178 (66%), Gaps = 1/178 (0%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N +DRM   ++ L+K++++LR GR +P++LD V+VE YG+  PLNQ+AN+ V +PR L++
Sbjct: 4   NAEDRMQKAVAALQKELVSLRAGRATPALLDRVQVEYYGAMTPLNQLANINVPDPRTLLI 63

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WDK  + ++E+ I +S LGL P  +G ++R+ +P  TEERRL LVK+   Y E +K++
Sbjct: 64  QPWDKSSLGAIEKAILKSELGLTPTSDGTMIRLTIPPLTEERRLELVKMTKKYGEDAKVA 123

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRRD  + +KK  K+ + SED     ++DIQK TD  I  +D     K+KEIM  
Sbjct: 124 IRNIRRDSNESIKKMEKT-EISEDESRRHQDDIQKSTDKYIAEVDKVLAAKEKEIMEV 180


>gi|307264902|ref|ZP_07546464.1| ribosome recycling factor [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326389448|ref|ZP_08211015.1| ribosome recycling factor [Thermoanaerobacter ethanolicus JW 200]
 gi|306920160|gb|EFN50372.1| ribosome recycling factor [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325994453|gb|EGD52878.1| ribosome recycling factor [Thermoanaerobacter ethanolicus JW 200]
          Length = 184

 Score =  164 bits (414), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M  ++S LK ++  +R GR +P++LD + V+ YG+  PLN++A +T  EPR+L
Sbjct: 5   LKASEEKMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD   ++ +E+ I +S+LG+NP+ +G+VLR+  PE TEERR  LVK+ H  AE++K
Sbjct: 65  VVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRRD  D +KK  K+G+ SED     E +IQK+TD  IK ID   E K+KEIM  
Sbjct: 125 VAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKAVEAKEKEIMEI 184


>gi|264679364|ref|YP_003279271.1| ribosome recycling factor [Comamonas testosteroni CNB-2]
 gi|299532323|ref|ZP_07045716.1| ribosome recycling factor [Comamonas testosteroni S44]
 gi|262209877|gb|ACY33975.1| ribosome recycling factor [Comamonas testosteroni CNB-2]
 gi|298719731|gb|EFI60695.1| ribosome recycling factor [Comamonas testosteroni S44]
          Length = 186

 Score =  163 bits (413), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/177 (45%), Positives = 119/177 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +MG +I  LK ++  +RTGR +P++LD + VE YGS VPL+QVANV++L+ R + 
Sbjct: 8   KNTETKMGQSIEALKNNLARVRTGRANPALLDAIHVEYYGSMVPLSQVANVSLLDSRTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A VE+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E +KI
Sbjct: 68  VQPWEKNMAAKVEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGENAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + +KK  K  +ASED     E +IQKITD  I  +D+    K+++IM
Sbjct: 128 AVRNLRRDANEGVKKLVKDKEASEDDQKRSEAEIQKITDKHIAEVDTLVAAKEQDIM 184


>gi|269101942|ref|ZP_06154639.1| ribosome recycling factor [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268161840|gb|EEZ40336.1| ribosome recycling factor [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 185

 Score =  163 bits (413), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 81/179 (45%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K RM  ++  LK  +  +RTGR  PS+LD + VE YG++ PLNQVANV   + R L 
Sbjct: 7   QDAKTRMEKSVDALKSQLAKVRTGRAHPSLLDTIYVEYYGANTPLNQVANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+  A AE+ ++
Sbjct: 67  ITVFDRELAPKVEKAIMMSDLGLNPMSAGTVIRVPLPALTEERRRDLVKIVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD   ++K   K  + SED     +++IQK+TD  IK+I++  E K+KE+M  
Sbjct: 127 AVRNIRRDANANVKALLKDKEISEDDDRRAQDEIQKLTDDAIKSIEAVLEVKEKELMEV 185


>gi|114777897|ref|ZP_01452811.1| Ribosome recycling factor [Mariprofundus ferrooxydans PV-1]
 gi|114551684|gb|EAU54236.1| Ribosome recycling factor [Mariprofundus ferrooxydans PV-1]
          Length = 181

 Score =  163 bits (413), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 119/175 (68%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +++RM  ++  L+ ++ T+RTGR + ++LD V V  YGS VP NQV N++V EPR+L+++
Sbjct: 5   LEERMKKSVVALRSELATIRTGRANAALLDQVTVSYYGSEVPFNQVGNISVPEPRILMIT 64

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            W+K ++  +E+ I +S+LGLNP  +G+V+RI +PE TE+RR  LVK A    EK+++S+
Sbjct: 65  PWEKSIIGDIEKAILKSDLGLNPTSDGEVVRIMLPELTEDRRKELVKKARTIGEKARVSI 124

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRRD  D +KK  K     ED    L++ IQKITD  I  +D   E K+++I+
Sbjct: 125 RNIRRDANDEVKKQAKDDNLPEDESKRLQDRIQKITDKYIAEVDQVIEHKEQDIL 179


>gi|308270379|emb|CBX26991.1| Ribosome-recycling factor [uncultured Desulfobacterium sp.]
          Length = 191

 Score =  163 bits (413), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 81/187 (43%), Positives = 125/187 (66%), Gaps = 2/187 (1%)

Query: 2   NQVIDL--QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           N +I+L  Q +++ MG +I+ L+ ++  +RTGR S S+LD ++V+ YG+  PLNQ+A+++
Sbjct: 5   NPMIELLFQEVRENMGKSIAALQNELKRVRTGRASLSILDGIRVDYYGTLTPLNQIASLS 64

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           V E R++ V  WD   +  +E+ I +S+LGL P  +G+++RI +P  TE+RR  LVKV H
Sbjct: 65  VPESRLITVQPWDVSAIKEIEKAILKSDLGLTPSSDGKIIRISIPPLTEDRRKKLVKVVH 124

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E  KI+VRNIRRD  + +K  +K G  +ED     ++ IQKITD  IK ID  ++EK
Sbjct: 125 KMCEDYKIAVRNIRRDSNESIKGFKKDGDLAEDAAFKAQDSIQKITDEHIKLIDGIYKEK 184

Query: 180 KKEIMHF 186
           +KEI+ F
Sbjct: 185 EKEILEF 191


>gi|224476382|ref|YP_002633988.1| ribosome recycling factor [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254809530|sp|B9DPH1|RRF_STACT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|222420989|emb|CAL27803.1| putative ribosome recycling factor [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 184

 Score =  163 bits (413), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 82/180 (45%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + RM  +I  L +++ T+  GR + ++L  VKV+ YG+  P+ Q+A++ V EPR+L
Sbjct: 5   LSETRSRMKKSIESLSRELATINAGRANSNLLAGVKVDYYGAPTPVQQLASINVPEPRLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VVS +DK  ++ +ER I+ +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K
Sbjct: 65  VVSPYDKTSLSDIERAINAANLGVNPSSDGEVIRIMVPALTEERRKELVKDVKKMGENAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D LKK  K G  SED + +  +D+QKITD +IK +D   EEK+K+IM  
Sbjct: 125 VSIRNIRRDSNDDLKKDEKEGVISEDELRTGTDDVQKITDESIKEVDKVLEEKEKDIMSV 184


>gi|257084575|ref|ZP_05578936.1| ribosome recycling factor [Enterococcus faecalis Fly1]
 gi|307287723|ref|ZP_07567766.1| ribosome recycling factor [Enterococcus faecalis TX0109]
 gi|256992605|gb|EEU79907.1| ribosome recycling factor [Enterococcus faecalis Fly1]
 gi|306501461|gb|EFM70764.1| ribosome recycling factor [Enterococcus faecalis TX0109]
 gi|315164822|gb|EFU08839.1| ribosome recycling factor [Enterococcus faecalis TX1302]
          Length = 185

 Score =  163 bits (413), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 124/179 (69%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L++++  +R GR + S+LD ++VE YG+  P+NQ+A++ + E R+L
Sbjct: 6   LATAKEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A +E+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE SK
Sbjct: 66  MITPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RRD MD LKK++K+G  +ED + S E D+QK+TD +IKNID+   EK++E++ 
Sbjct: 126 IAVRNVRRDAMDELKKAQKNGDITEDELRSFEKDVQKLTDDSIKNIDAITAEKEQELLE 184


>gi|168188136|ref|ZP_02622771.1| ribosome recycling factor [Clostridium botulinum C str. Eklund]
 gi|169294032|gb|EDS76165.1| ribosome recycling factor [Clostridium botulinum C str. Eklund]
          Length = 185

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/180 (45%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M  +IS LKKD+ +++ G+ +P+MLD V VE YGS  P+NQ+ANV+  EPR+L
Sbjct: 6   LNNSQEKMLKSISVLKKDLGSMKAGKANPAMLDRVNVEYYGSETPINQLANVSSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  +  +ER I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E+SK
Sbjct: 66  LIQPWDKNSLKDIERAILQSDLGLNPSNDGSVIRLIIPELTEETRKDIVKKVKKVGEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++R+IRR+G D +K  +K+   +ED     EN +QKITD  I  ID+  + K+KE+M  
Sbjct: 126 IAIRSIRREGNDKIKNLKKNNDITEDEAKEGENSVQKITDKYITEIDNIIDAKEKEVMSV 185


>gi|253681713|ref|ZP_04862510.1| ribosome recycling factor [Clostridium botulinum D str. 1873]
 gi|253561425|gb|EES90877.1| ribosome recycling factor [Clostridium botulinum D str. 1873]
          Length = 185

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 119/178 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M  +IS LKK++ +++ G+ +PSMLD +KVE YGS  P+NQ+ANV+  EPR+L
Sbjct: 6   LNKSKEKMDKSISVLKKELSSMKAGKANPSMLDKIKVEYYGSETPINQLANVSSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  +  +ER I +S+LGLNP  +G V+R+ VPE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKNSLKDIERAILQSDLGLNPSNDGSVIRLIVPELTEETRKEIVKKVKKMGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++R+IRRD  D +K  +K  + +ED     E+ +QKITD  IK ID     K+K++M
Sbjct: 126 VAIRSIRRDANDKIKNLKKDNEITEDEAKEGEDSVQKITDKAIKEIDEVISLKEKDVM 183


>gi|212710394|ref|ZP_03318522.1| hypothetical protein PROVALCAL_01454 [Providencia alcalifaciens DSM
           30120]
 gi|212686976|gb|EEB46504.1| hypothetical protein PROVALCAL_01454 [Providencia alcalifaciens DSM
           30120]
          Length = 185

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/179 (45%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + VE YGS  PL Q+ANVTV + R L 
Sbjct: 7   KDAQDRMEKSLESLKSQISKVRTGRASPSLLDGITVEYYGSATPLRQLANVTVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +I
Sbjct: 67  ISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGDAEQGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     ++DIQK+TD  IK +D    +K+ E+M F
Sbjct: 127 AIRNVRRDANDKVKALLKDKEISEDDERRSQDDIQKLTDHFIKKVDEALAQKEAELMEF 185


>gi|24215994|ref|NP_713475.1| ribosome recycling factor [Leptospira interrogans serovar Lai str.
           56601]
 gi|45656744|ref|YP_000830.1| ribosome recycling factor [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|34924967|sp|Q8F143|RRF_LEPIN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|59798561|sp|Q72U11|RRF_LEPIC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|24197218|gb|AAN50493.1|AE011490_8 ribosome recycling factor [Leptospira interrogans serovar Lai str.
           56601]
 gi|45599980|gb|AAS69467.1| ribosome recycling factor [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 184

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/177 (45%), Positives = 121/177 (68%), Gaps = 2/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +K +M  TI  +KKD  T+RTGR +PS+++ ++V+ YG+  P+NQ+ N++V EPRML
Sbjct: 7   ISGMKTKMDKTIDLVKKDFGTIRTGRANPSLVEDIRVDYYGNQTPINQLGNISVPEPRML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK ++  +E+ I  S LGL P  +G V+RI +PE T ERR  L KV  + +E+ K
Sbjct: 67  VISPYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD M+ LKK  +    S+D + S+++ IQKITDS I  I +   EK+KEI
Sbjct: 127 VAIRNIRRDAMEDLKKHTEG--MSQDEIKSVQDQIQKITDSYIDKISALTAEKEKEI 181


>gi|271499498|ref|YP_003332523.1| ribosome recycling factor [Dickeya dadantii Ech586]
 gi|270343053|gb|ACZ75818.1| ribosome recycling factor [Dickeya dadantii Ech586]
          Length = 185

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/174 (45%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SP++LD + VE YGS  PL Q+AN+ V + R L V+V+D
Sbjct: 12  RMDKCVEAFKNQISKVRTGRASPTLLDGIHVEYYGSATPLRQLANIVVEDSRTLAVTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RTLGPAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D LK   K    SED     ++D+QK+TD  IK ID+   EK+KE+M F
Sbjct: 132 RRDANDKLKAQLKDKTISEDEERRAQDDVQKLTDGFIKKIDAALAEKEKELMDF 185


>gi|317129173|ref|YP_004095455.1| ribosome recycling factor [Bacillus cellulosilyticus DSM 2522]
 gi|315474121|gb|ADU30724.1| ribosome recycling factor [Bacillus cellulosilyticus DSM 2522]
          Length = 185

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 119/173 (68%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++   +K++ T+R GR +PS+LD V+VE YG   PLNQ+A++ V E RML +  +D
Sbjct: 12  KMSKSVEAFRKELATIRAGRANPSLLDKVQVEYYGMMTPLNQLASIAVPEARMLTIQPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  +  +ER I +++LGL+P  +G ++RI +P  TEERR  LVK+   Y+E++K++VRNI
Sbjct: 72  KSSLQDIERAIQKADLGLSPTNDGNIIRIAIPALTEERRKELVKLVGRYSEEAKVAVRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD  D LKK  K G+ +ED +   ++++QK+TD  IK+ID   + K++EIM 
Sbjct: 132 RRDANDELKKLEKDGELTEDDLRWNQDEVQKLTDGVIKDIDEIAKSKEQEIME 184


>gi|157825336|ref|YP_001493056.1| ribosome recycling factor [Rickettsia akari str. Hartford]
 gi|166231216|sp|A8GMC3|RRF_RICAH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157799294|gb|ABV74548.1| ribosome releasing factor [Rickettsia akari str. Hartford]
          Length = 186

 Score =  163 bits (412), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 120/175 (68%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++++M   +  L  ++  LRTGR S ++LD V VEAYGS + L+QVA+++  + R + V 
Sbjct: 10  LQEKMDKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMLLSQVASLSTPDARTINVQ 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KIS+
Sbjct: 70  VWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRKELVKLAHKYGEDAKISL 129

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRRDG + LKK  K    ++D   +L   +QK+TD     +DS  ++K+++IM
Sbjct: 130 RNIRRDGNEELKKLEKDNIIAKDEHHNLSEQVQKLTDEYSSKVDSAIKQKEQDIM 184


>gi|258645593|ref|ZP_05733062.1| ribosome recycling factor [Dialister invisus DSM 15470]
 gi|260402951|gb|EEW96498.1| ribosome recycling factor [Dialister invisus DSM 15470]
          Length = 185

 Score =  162 bits (411), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 129/179 (72%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+++ ++M  +I  L+ +  ++RTG+ SPS+LD V V+ YGS  P+ QVA+VTV E RM
Sbjct: 5   ELKHLSEKMDKSIQALRNEFTSIRTGQASPSLLDRVFVDYYGSKTPVTQVASVTVPEARM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           LVV  WDK ++  +E+ I+ S+LGL P+ +G ++R+ +P+ TE+RR  LVKV +  AE++
Sbjct: 65  LVVQPWDKGILKDIEKAINMSDLGLVPMNDGNLIRMAIPQLTEQRRKDLVKVVNKKAEEA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           K+++RNIRRDG   LKK  K+   S+D++  +E+ IQK+TD  IK++++  ++K KEI+
Sbjct: 125 KVAIRNIRRDGNVFLKKEEKNSDISKDVIKDMEDKIQKLTDQKIKDLEAVTDKKVKEIL 183


>gi|221066088|ref|ZP_03542193.1| ribosome recycling factor [Comamonas testosteroni KF-1]
 gi|220711111|gb|EED66479.1| ribosome recycling factor [Comamonas testosteroni KF-1]
          Length = 186

 Score =  162 bits (411), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/177 (45%), Positives = 118/177 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +MG +I  LK ++  +RTGR +P++LD + VE YGS VPL+QVANV++L+ R + 
Sbjct: 8   KNTETKMGQSIEALKNNLARVRTGRANPALLDAIHVEYYGSMVPLSQVANVSLLDSRTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A VE+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E  KI
Sbjct: 68  VQPWEKNMAAKVEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGENGKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + +KK  K  +ASED     E +IQKITD  I  +D+    K+++IM
Sbjct: 128 AIRNLRRDANESVKKLVKDKEASEDDQKRSEAEIQKITDKHIAEVDTLVAAKEQDIM 184


>gi|253988128|ref|YP_003039484.1| ribosome recycling factor [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779578|emb|CAQ82739.1| ribosome recycling factor (ribosome-releasing factor) (rrf)
           [Photorhabdus asymbiotica]
          Length = 185

 Score =  162 bits (411), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + VE YG+  PL Q+ANVT  + R L 
Sbjct: 7   KDAQDRMEKSVEALKNQISKVRTGRASPSLLDGITVEYYGAPTPLRQIANVTAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  ++E+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  ITVFDRSMTPAIEKAIMSSDLGLNPSSAGTIIRVPLPPLTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD  D +K   K  + SED     +++IQK+TD+ IK +D    +K++E+M F
Sbjct: 127 SVRNIRRDANDKIKALLKDKEISEDDERRAQDEIQKLTDNFIKKVDEALAKKEEELMEF 185


>gi|253581352|ref|ZP_04858578.1| ribosome recycling factor [Fusobacterium varium ATCC 27725]
 gi|251836716|gb|EES65250.1| ribosome recycling factor [Fusobacterium varium ATCC 27725]
          Length = 188

 Score =  162 bits (411), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/182 (48%), Positives = 120/182 (65%), Gaps = 4/182 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           V+ L N  ++MG  I   K    ++R GR S SMLD V+VE YGS +PLNQV +V+  E 
Sbjct: 6   VVKLCN--EKMGKAIEATKHKFTSIRAGRASVSMLDSVRVEQYGSEMPLNQVGSVSAPEA 63

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R+LV+  WDK +++ +E+ I  +NLGL P  +G+V+R+ +PE T ERR   VK+A   AE
Sbjct: 64  RLLVIDPWDKSLISKIEKAIMAANLGLTPNNDGKVIRLVMPELTAERRKEYVKMAKTEAE 123

Query: 124 KSKISVRNIRRDGMDHLKK--SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
             K++VRNIR+DG + LKK    K    SED V +LE +IQKITD+ IK ID  F +K+K
Sbjct: 124 NGKVAVRNIRKDGNNDLKKLSKDKENPISEDEVKTLEAEIQKITDAHIKVIDDLFAKKEK 183

Query: 182 EI 183
           EI
Sbjct: 184 EI 185


>gi|212636274|ref|YP_002312799.1| ribosome recycling factor [Shewanella piezotolerans WP3]
 gi|226703268|sp|B8CQ82|RRF_SHEPW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|212557758|gb|ACJ30212.1| Ribosome recycling factor [Shewanella piezotolerans WP3]
          Length = 185

 Score =  162 bits (411), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  M  +RTGR  PS+LD ++V  YGS  PL QVA+V++ + R L VSV+D
Sbjct: 12  RMDKCVESTKTQMAKVRTGRAHPSLLDTIQVPYYGSLTPLKQVASVSIGDARTLNVSVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M+A+VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KV  A AE  +I+VRN+
Sbjct: 72  RTMIAAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRIAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD    +K   K  + +ED V   E+++QK TD+ IK ID     K+KE+M F
Sbjct: 132 RRDANSDVKALEKEKECTEDDVRRTEDEVQKFTDAHIKKIDEILAAKEKELMEF 185


>gi|331269638|ref|YP_004396130.1| ribosome recycling factor [Clostridium botulinum BKT015925]
 gi|329126188|gb|AEB76133.1| ribosome recycling factor [Clostridium botulinum BKT015925]
          Length = 185

 Score =  162 bits (411), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  TIS LKK++ +++ G+ +P+MLD +KVE YGS  P+NQ+ANV+  EPR+L
Sbjct: 6   LNKSQEKMDKTISVLKKELSSMKAGKANPAMLDKIKVEYYGSETPINQLANVSSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  +  +ER I +S+LGLNP  +G V+R+ VPE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKNSLKDIERAILQSDLGLNPSNDGSVIRLIVPELTEETRKEIVKKVKKMGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K  + +ED     E+ +QKITD  IK ID     K+ ++M  
Sbjct: 126 VAIRSIRRDANDKIKNLKKDNEVTEDEAKEGEDSVQKITDKAIKQIDEVISSKENDVMSI 185


>gi|24373200|ref|NP_717243.1| ribosome recycling factor [Shewanella oneidensis MR-1]
 gi|34924965|sp|Q8EGH2|RRF_SHEON RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|24347421|gb|AAN54687.1|AE015609_6 ribosome recycling factor [Shewanella oneidensis MR-1]
          Length = 185

 Score =  162 bits (411), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 115/178 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV V + R L 
Sbjct: 7   KDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV  A AE  ++
Sbjct: 67  VTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RN+RRD +  +KK  K+ + +ED V   E+++QK TD+ IK +D     K+ E+M 
Sbjct: 127 AIRNVRRDAISDVKKLEKAKECTEDDVRRFEDEVQKFTDAHIKKVDEILAAKEIELME 184


>gi|29376892|ref|NP_816046.1| ribosome recycling factor [Enterococcus faecalis V583]
 gi|227519884|ref|ZP_03949933.1| ribosome recycling factor [Enterococcus faecalis TX0104]
 gi|227553929|ref|ZP_03983976.1| ribosome recycling factor [Enterococcus faecalis HH22]
 gi|229549430|ref|ZP_04438155.1| ribosome recycling factor [Enterococcus faecalis ATCC 29200]
 gi|255972134|ref|ZP_05422720.1| ribosome recycling factor [Enterococcus faecalis T1]
 gi|255975201|ref|ZP_05425787.1| ribosome recycling factor [Enterococcus faecalis T2]
 gi|256617047|ref|ZP_05473893.1| ribosome recycling factor [Enterococcus faecalis ATCC 4200]
 gi|256763091|ref|ZP_05503671.1| ribosome recycling factor [Enterococcus faecalis T3]
 gi|256853758|ref|ZP_05559123.1| ribosome recycling factor [Enterococcus faecalis T8]
 gi|256956675|ref|ZP_05560846.1| ribosome recycling factor [Enterococcus faecalis DS5]
 gi|256961308|ref|ZP_05565479.1| ribosome recycling factor [Enterococcus faecalis Merz96]
 gi|256963564|ref|ZP_05567735.1| ribosome recycling factor [Enterococcus faecalis HIP11704]
 gi|257079630|ref|ZP_05573991.1| ribosome recycling factor [Enterococcus faecalis JH1]
 gi|257087429|ref|ZP_05581790.1| ribosome recycling factor [Enterococcus faecalis D6]
 gi|257090589|ref|ZP_05584950.1| ribosome recycling factor [Enterococcus faecalis CH188]
 gi|257416636|ref|ZP_05593630.1| ribosome recycling factor [Enterococcus faecalis AR01/DG]
 gi|257419852|ref|ZP_05596846.1| ribosome recycling factor [Enterococcus faecalis T11]
 gi|257421959|ref|ZP_05598949.1| ribosome recycling factor [Enterococcus faecalis X98]
 gi|293383593|ref|ZP_06629503.1| ribosome recycling factor [Enterococcus faecalis R712]
 gi|293387294|ref|ZP_06631851.1| ribosome recycling factor [Enterococcus faecalis S613]
 gi|294780910|ref|ZP_06746264.1| ribosome recycling factor [Enterococcus faecalis PC1.1]
 gi|300861008|ref|ZP_07107095.1| ribosome recycling factor [Enterococcus faecalis TUSoD Ef11]
 gi|307270847|ref|ZP_07552134.1| ribosome recycling factor [Enterococcus faecalis TX4248]
 gi|307271503|ref|ZP_07552775.1| ribosome recycling factor [Enterococcus faecalis TX0855]
 gi|307277169|ref|ZP_07558273.1| ribosome recycling factor [Enterococcus faecalis TX2134]
 gi|307285820|ref|ZP_07565954.1| ribosome recycling factor [Enterococcus faecalis TX0860]
 gi|307290551|ref|ZP_07570463.1| ribosome recycling factor [Enterococcus faecalis TX0411]
 gi|312899827|ref|ZP_07759146.1| ribosome recycling factor [Enterococcus faecalis TX0470]
 gi|312905119|ref|ZP_07764240.1| ribosome recycling factor [Enterococcus faecalis TX0635]
 gi|312906143|ref|ZP_07765155.1| ribosome recycling factor [Enterococcus faecalis DAPTO 512]
 gi|312909488|ref|ZP_07768343.1| ribosome recycling factor [Enterococcus faecalis DAPTO 516]
 gi|312953477|ref|ZP_07772317.1| ribosome recycling factor [Enterococcus faecalis TX0102]
 gi|34924912|sp|Q831V2|RRF_ENTFA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29344357|gb|AAO82116.1| ribosome recycling factor [Enterococcus faecalis V583]
 gi|227072678|gb|EEI10641.1| ribosome recycling factor [Enterococcus faecalis TX0104]
 gi|227176915|gb|EEI57887.1| ribosome recycling factor [Enterococcus faecalis HH22]
 gi|229305667|gb|EEN71663.1| ribosome recycling factor [Enterococcus faecalis ATCC 29200]
 gi|255963152|gb|EET95628.1| ribosome recycling factor [Enterococcus faecalis T1]
 gi|255968073|gb|EET98695.1| ribosome recycling factor [Enterococcus faecalis T2]
 gi|256596574|gb|EEU15750.1| ribosome recycling factor [Enterococcus faecalis ATCC 4200]
 gi|256684342|gb|EEU24037.1| ribosome recycling factor [Enterococcus faecalis T3]
 gi|256710701|gb|EEU25744.1| ribosome recycling factor [Enterococcus faecalis T8]
 gi|256947171|gb|EEU63803.1| ribosome recycling factor [Enterococcus faecalis DS5]
 gi|256951804|gb|EEU68436.1| ribosome recycling factor [Enterococcus faecalis Merz96]
 gi|256954060|gb|EEU70692.1| ribosome recycling factor [Enterococcus faecalis HIP11704]
 gi|256987660|gb|EEU74962.1| ribosome recycling factor [Enterococcus faecalis JH1]
 gi|256995459|gb|EEU82761.1| ribosome recycling factor [Enterococcus faecalis D6]
 gi|256999401|gb|EEU85921.1| ribosome recycling factor [Enterococcus faecalis CH188]
 gi|257158464|gb|EEU88424.1| ribosome recycling factor [Enterococcus faecalis ARO1/DG]
 gi|257161680|gb|EEU91640.1| ribosome recycling factor [Enterococcus faecalis T11]
 gi|257163783|gb|EEU93743.1| ribosome recycling factor [Enterococcus faecalis X98]
 gi|291079105|gb|EFE16469.1| ribosome recycling factor [Enterococcus faecalis R712]
 gi|291083331|gb|EFE20294.1| ribosome recycling factor [Enterococcus faecalis S613]
 gi|294452036|gb|EFG20484.1| ribosome recycling factor [Enterococcus faecalis PC1.1]
 gi|295113452|emb|CBL32089.1| ribosome recycling factor [Enterococcus sp. 7L76]
 gi|300850047|gb|EFK77797.1| ribosome recycling factor [Enterococcus faecalis TUSoD Ef11]
 gi|306498406|gb|EFM67911.1| ribosome recycling factor [Enterococcus faecalis TX0411]
 gi|306502581|gb|EFM71848.1| ribosome recycling factor [Enterococcus faecalis TX0860]
 gi|306506099|gb|EFM75265.1| ribosome recycling factor [Enterococcus faecalis TX2134]
 gi|306511775|gb|EFM80773.1| ribosome recycling factor [Enterococcus faecalis TX0855]
 gi|306512760|gb|EFM81405.1| ribosome recycling factor [Enterococcus faecalis TX4248]
 gi|310627789|gb|EFQ11072.1| ribosome recycling factor [Enterococcus faecalis DAPTO 512]
 gi|310628686|gb|EFQ11969.1| ribosome recycling factor [Enterococcus faecalis TX0102]
 gi|310631509|gb|EFQ14792.1| ribosome recycling factor [Enterococcus faecalis TX0635]
 gi|311290161|gb|EFQ68717.1| ribosome recycling factor [Enterococcus faecalis DAPTO 516]
 gi|311293077|gb|EFQ71633.1| ribosome recycling factor [Enterococcus faecalis TX0470]
 gi|315025416|gb|EFT37348.1| ribosome recycling factor [Enterococcus faecalis TX2137]
 gi|315030225|gb|EFT42157.1| ribosome recycling factor [Enterococcus faecalis TX4000]
 gi|315032889|gb|EFT44821.1| ribosome recycling factor [Enterococcus faecalis TX0017]
 gi|315035626|gb|EFT47558.1| ribosome recycling factor [Enterococcus faecalis TX0027]
 gi|315146673|gb|EFT90689.1| ribosome recycling factor [Enterococcus faecalis TX4244]
 gi|315150163|gb|EFT94179.1| ribosome recycling factor [Enterococcus faecalis TX0012]
 gi|315152144|gb|EFT96160.1| ribosome recycling factor [Enterococcus faecalis TX0031]
 gi|315155331|gb|EFT99347.1| ribosome recycling factor [Enterococcus faecalis TX0043]
 gi|315159093|gb|EFU03110.1| ribosome recycling factor [Enterococcus faecalis TX0312]
 gi|315161686|gb|EFU05703.1| ribosome recycling factor [Enterococcus faecalis TX0645]
 gi|315166409|gb|EFU10426.1| ribosome recycling factor [Enterococcus faecalis TX1341]
 gi|315170306|gb|EFU14323.1| ribosome recycling factor [Enterococcus faecalis TX1342]
 gi|315173660|gb|EFU17677.1| ribosome recycling factor [Enterococcus faecalis TX1346]
 gi|315574370|gb|EFU86561.1| ribosome recycling factor [Enterococcus faecalis TX0309B]
 gi|315579052|gb|EFU91243.1| ribosome recycling factor [Enterococcus faecalis TX0630]
 gi|315580155|gb|EFU92346.1| ribosome recycling factor [Enterococcus faecalis TX0309A]
 gi|323481387|gb|ADX80826.1| ribosome recycling factor [Enterococcus faecalis 62]
 gi|327535683|gb|AEA94517.1| ribosome recycling factor [Enterococcus faecalis OG1RF]
 gi|329572247|gb|EGG53907.1| ribosome recycling factor [Enterococcus faecalis TX1467]
          Length = 185

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 124/179 (69%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L++++  +R GR + S+LD ++VE YG+  P+NQ+A++ + E R+L
Sbjct: 6   LATAKEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A +E+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE SK
Sbjct: 66  MITPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD MD LKK++K+G  +ED + S E D+QK+TD +IKNID+   EK++E++ 
Sbjct: 126 VAVRNVRRDAMDELKKAQKNGDITEDELRSFEKDVQKLTDDSIKNIDAITAEKEQELLE 184


>gi|330830752|ref|YP_004393704.1| ribosome-recycling factor [Aeromonas veronii B565]
 gi|328805888|gb|AEB51087.1| Ribosome-recycling factor [Aeromonas veronii B565]
          Length = 185

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/178 (46%), Positives = 114/178 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + KDRMG ++  LK  M  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L +
Sbjct: 8   DAKDRMGKSVEALKTQMSKIRTGRAHPSLLDGIQVEYYGAATPLKQLANVVAEDARTLSI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S++D+ M+ +VE+ I  S+LGLNP   GQ LR+P+P  TEERR  L K+  A AE ++++
Sbjct: 68  SIFDRSMIQAVEKAILTSDLGLNPSSNGQTLRVPLPPLTEERRRDLTKIVRAEAENARVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIRRD    LK   K  + SED     + +IQK+TDS IK +D     K+KE+M  
Sbjct: 128 VRNIRRDANADLKALLKDKEISEDDDRRAQEEIQKLTDSYIKLVDEALAVKEKELMEI 185


>gi|117921253|ref|YP_870445.1| ribosome recycling factor [Shewanella sp. ANA-3]
 gi|166231228|sp|A0KZ20|RRF_SHESA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|117613585|gb|ABK49039.1| ribosome recycling factor [Shewanella sp. ANA-3]
          Length = 185

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 115/178 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV + + R L 
Sbjct: 7   KDAQERMGKCVEATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGIEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV  A AE  ++
Sbjct: 67  VTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RN+RRD +  +KK  K+ + +ED V   E+++QK TD+ IK +D     K+ E+M 
Sbjct: 127 AIRNVRRDAISEVKKLEKAKECTEDDVRRFEDEVQKFTDAHIKKVDEILAAKEIELME 184


>gi|254360757|ref|ZP_04976905.1| peptide chain release factor RF4 [Mannheimia haemolytica PHL213]
 gi|261491693|ref|ZP_05988274.1| peptide chain release factor RF4 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261494456|ref|ZP_05990942.1| peptide chain release factor RF4 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|153091327|gb|EDN73301.1| peptide chain release factor RF4 [Mannheimia haemolytica PHL213]
 gi|261309840|gb|EEY11057.1| peptide chain release factor RF4 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261312646|gb|EEY13768.1| peptide chain release factor RF4 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 185

 Score =  162 bits (411), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL QVANV   + R L 
Sbjct: 7   KDTQDRMEKSLEALKGHIAKIRTGRAQPSLLDGIQVEYYGSATPLRQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+DK ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  A  E+ K+
Sbjct: 67  VNVFDKSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKAEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E DIQKITD+ IK +D     K+KE++ F
Sbjct: 127 AIRNVRRDANDQIKALLKDKEISENEQHKAEEDIQKITDTFIKKVDEVLAAKEKELLDF 185


>gi|237785749|ref|YP_002906454.1| ribosome recycling factor [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259494536|sp|C4LJA6|RRF_CORK4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|237758661|gb|ACR17911.1| Ribosome recycling factor [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 185

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 119/175 (68%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM  ++ + ++D+ T+RTGR +PSM + V+ E YG   P+ Q+A ++V EPRML++  
Sbjct: 10  EERMTQSVEYAREDLTTIRTGRANPSMFNGVQAEYYGVMTPITQMATISVPEPRMLLIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++  ++ ++E  I  S+LG+NP  +GQVLR+ VP+ TEERR  +V++A +  E ++I++R
Sbjct: 70  YEPSIMNAIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRKEMVRLAKSKGEDARIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR GMD LK+ +K G+A ED V + E ++ K T   +  +D   E K+KE+M 
Sbjct: 130 NIRRKGMDELKRIQKDGEAGEDEVQAAEKELDKTTHEYVSQVDKLIEAKEKELME 184


>gi|227326540|ref|ZP_03830564.1| ribosome recycling factor [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 185

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/174 (47%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD ++VE YGS  PL QVANV V + R L +SV+D
Sbjct: 12  RMDKCVEAFKNQISKIRTGRASPSILDGIQVEYYGSATPLRQVANVVVEDSRTLAISVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +ISVRN+
Sbjct: 72  RSLGPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRISVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D LK   K    SED     ++D+QK+TD+ IK +D    EK+ E+M F
Sbjct: 132 RRDANDKLKALLKDKAISEDEERRAQDDVQKLTDNFIKKVDVALAEKEAELMEF 185


>gi|268315588|ref|YP_003289307.1| ribosome recycling factor [Rhodothermus marinus DSM 4252]
 gi|262333122|gb|ACY46919.1| ribosome recycling factor [Rhodothermus marinus DSM 4252]
          Length = 192

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 121/178 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++ M  +++ L+ ++  LR GR +P+ML+ V+VE YG+  PL Q+A++T  +P +L
Sbjct: 13  LDDAREHMEKSLAHLRTELAALRAGRATPAMLEDVRVEYYGTMTPLMQLASITAPQPDLL 72

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  WD+  + ++ER I  +NLGLNP  +G ++RIP+P  +EERR  LV+ A   AE+++
Sbjct: 73  IVQPWDRSALGAIERAIINANLGLNPSNDGNIIRIPIPPLSEERRKELVRAARIRAEEAR 132

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRR   DH+KK+++     ED+  + E ++QK+TD+ I+ ++   E K+ EIM
Sbjct: 133 VAIRNIRRHAKDHIKKAKEEEHLPEDLCHAAEEELQKLTDTYIEKVNQLLERKEAEIM 190


>gi|332296167|ref|YP_004438090.1| Ribosome-recycling factor [Thermodesulfobium narugense DSM 14796]
 gi|332179270|gb|AEE14959.1| Ribosome-recycling factor [Thermodesulfobium narugense DSM 14796]
          Length = 185

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 126/180 (70%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           ++++++ RM   +  L K+  ++RTGR SP++LD VKV+ YG+ VP+ Q+ANV+  + R 
Sbjct: 5   EIEHLRQRMSKAVDNLSKEFASVRTGRASPALLDHVKVDYYGTTVPIKQLANVSQQDART 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L+++V+DK  + +V++ I  S+LGL P V+G VLRI +P  T+ERR  LVKV    AE++
Sbjct: 65  LLINVYDKNALQAVDKAIRLSDLGLTPQVDGMVLRIVIPTLTQERRKELVKVVKKMAEEA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++VRNIRRD ++ L+K  K+ + SED +   +N+ QKITDS I+ ID     K+KEI++
Sbjct: 125 RVAVRNIRRDELEILEKRAKNKEISEDDLKRFKNEFQKITDSYIQEIDKLLSNKEKEILN 184


>gi|319441376|ref|ZP_07990532.1| ribosome recycling factor [Corynebacterium variabile DSM 44702]
          Length = 185

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +D M  ++  +++D+ T+RTGR +P+M + V  E YG   P+ Q+A ++V EPRML
Sbjct: 6   LLDAEDHMSRSVDHVREDLTTIRTGRANPAMFNRVFAEYYGMRTPITQMATISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++  ++  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  LVKVA    E +K
Sbjct: 66  IIKPYEMSVMQEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDLVKVARGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+RNIRR GMD LKK +K G A ED V + E ++ KIT   +  +D     K+KE+M 
Sbjct: 126 ISIRNIRRKGMDSLKKIQKDGDAGEDEVQAAEKELDKITQGYVAQVDEVVSSKEKELME 184


>gi|332530832|ref|ZP_08406758.1| ribosome recycling factor [Hylemonella gracilis ATCC 19624]
 gi|332039744|gb|EGI76144.1| ribosome recycling factor [Hylemonella gracilis ATCC 19624]
          Length = 187

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 82/185 (44%), Positives = 120/185 (64%), Gaps = 1/185 (0%)

Query: 1   MNQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  + D++ N++ +M  +I  LK ++  +RTGR +P++LD V+VE YGS VPL+QVANV 
Sbjct: 1   MTTIADIKKNVEGKMDQSIEALKNNLSKIRTGRANPALLDAVQVEYYGSMVPLSQVANVA 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           +L+ R + V  W+K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+  
Sbjct: 61  LLDARTISVQPWEKGMGAKIEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLVR 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E +KI+VRN+RRDG + +KK  K   ASED     E DIQK TD  +  ID     K
Sbjct: 121 NEGEAAKIAVRNLRRDGNEAVKKLVKDKTASEDDQKRAEADIQKFTDKHVATIDQLVAAK 180

Query: 180 KKEIM 184
           ++E+M
Sbjct: 181 EQEVM 185


>gi|160900377|ref|YP_001565959.1| ribosome recycling factor [Delftia acidovorans SPH-1]
 gi|238687160|sp|A9BMM9|RRF_DELAS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|160365961|gb|ABX37574.1| ribosome recycling factor [Delftia acidovorans SPH-1]
          Length = 186

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 81/172 (47%), Positives = 115/172 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +MG +I  LK ++  +RTGR +PS+LD + V+ YGS VPL+QVANV +L+ R + V  W+
Sbjct: 13  KMGQSIEALKNNLARVRTGRANPSLLDSIHVDYYGSMVPLSQVANVNLLDARTISVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M A VE+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E SKI+VRN+
Sbjct: 73  KSMSAKVEKAIRESDLGLNPASLGDLIRVPMPPMSEERRKEMTKLARNEGEASKIAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + +KK  K  +ASED     E D+QK+TD  I  ID+    K+++IM
Sbjct: 133 RRDANEAVKKLVKDKEASEDDQKRCEADVQKMTDKHITEIDALVAAKEQDIM 184


>gi|257082024|ref|ZP_05576385.1| ribosome recycling factor [Enterococcus faecalis E1Sol]
 gi|256990054|gb|EEU77356.1| ribosome recycling factor [Enterococcus faecalis E1Sol]
          Length = 185

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 124/179 (69%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L++++  +R GR + S+LD ++VE YG+  P+NQ+A++ + E R+L
Sbjct: 6   LATAKEKMTKAEEGLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A +E+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE SK
Sbjct: 66  MITPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD MD LKK++K+G  +ED + S E D+QK+TD +IKNID+   EK++E++ 
Sbjct: 126 VAVRNVRRDAMDELKKAQKNGDITEDELRSFEKDVQKLTDDSIKNIDAITAEKEQELLE 184


>gi|167759673|ref|ZP_02431800.1| hypothetical protein CLOSCI_02032 [Clostridium scindens ATCC 35704]
 gi|167662704|gb|EDS06834.1| hypothetical protein CLOSCI_02032 [Clostridium scindens ATCC 35704]
          Length = 183

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 119/178 (66%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  +D+M  T++ L+ D+ T+R GR +P++L+ + V+ YG+  P+ QV NV+V EPRM+
Sbjct: 5   LQVYEDKMKKTMASLESDLATIRAGRANPNVLNKIMVDYYGTPTPIQQVGNVSVPEPRMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+K MV ++E+ I  S LG+NP  +G  +R+  PE TEERR  LVK      E +K
Sbjct: 65  LIQPWEKSMVKAIEKAIQTSELGINPTNDGSAIRLVFPELTEERRKELVKDVKKKGEGAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRDG D LKK + S + SED +  +E ++QK+TD  +K +D   E K KE+M
Sbjct: 125 VAIRNIRRDGNDALKKLKGS-EVSEDEIKDMEEELQKVTDKFVKKVDEAVEAKSKEVM 181


>gi|258516352|ref|YP_003192574.1| ribosome recycling factor [Desulfotomaculum acetoxidans DSM 771]
 gi|257780057|gb|ACV63951.1| ribosome recycling factor [Desulfotomaculum acetoxidans DSM 771]
          Length = 185

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/179 (44%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +D M  T+  +KKD  +LR GR +P +LD + V+ YG+  P+NQ+ANV+V E R+L
Sbjct: 6   LEDAEDSMKKTVEVVKKDFASLRAGRATPGLLDKINVDYYGTPTPVNQLANVSVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++ ++E+ I +S+LG+ P  +G V+R+ VP+ TEERR  LVKV    AE+ +
Sbjct: 66  VIQPWDKSVIPALEKAILKSDLGITPNSDGVVIRLAVPQLTEERRKDLVKVVKKKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD  D LK  +K G  +ED     ++++QK+TD  IK+ID     K+KEIM 
Sbjct: 126 VAVRNIRRDANDLLKSEQKDGNITEDDSRRAQDEVQKLTDKYIKDIDQLMANKEKEIMQ 184


>gi|119774279|ref|YP_927019.1| ribosome recycling factor [Shewanella amazonensis SB2B]
 gi|166231223|sp|A1S4P3|RRF_SHEAM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119766779|gb|ABL99349.1| ribosome recycling factor [Shewanella amazonensis SB2B]
          Length = 185

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 112/178 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRMG  +   K  M  +RTGR  PS+LD ++V  YGS  PL QV NVT+ + R L 
Sbjct: 7   KDAQDRMGKCVEATKAQMAKVRTGRAHPSLLDTIQVNYYGSMTPLKQVGNVTIEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+  + +VE+ I  S+LGLNP+  G  +RIP+P  TEERR  LVKV  A AE+ ++
Sbjct: 67  VNVFDRSAIQAVEKAIMSSDLGLNPMSAGATIRIPLPPLTEERRRDLVKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RN+RRD     K+  K  + +ED V   E ++QKITD  IK ID     K+ E+M 
Sbjct: 127 AIRNVRRDANSSFKQLEKEKECTEDDVRRSEEEVQKITDLHIKKIDELLAAKEAELME 184


>gi|113970973|ref|YP_734766.1| ribosome recycling factor [Shewanella sp. MR-4]
 gi|114048197|ref|YP_738747.1| ribosome recycling factor [Shewanella sp. MR-7]
 gi|123130244|sp|Q0HGV8|RRF_SHESM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123131225|sp|Q0HT65|RRF_SHESR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|113885657|gb|ABI39709.1| ribosome recycling factor [Shewanella sp. MR-4]
 gi|113889639|gb|ABI43690.1| ribosome recycling factor [Shewanella sp. MR-7]
          Length = 185

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 115/178 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV + + R L 
Sbjct: 7   KDAQERMGKCVEATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGIEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV  A AE  ++
Sbjct: 67  VTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RN+RRD +  +KK  K+ + +ED V   E+++QK TD+ IK +D     K+ E+M 
Sbjct: 127 AIRNVRRDAISDVKKLEKAKECTEDDVRRFEDEVQKFTDAHIKKVDEILAAKEIELME 184


>gi|116620031|ref|YP_822187.1| ribosome recycling factor [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223193|gb|ABJ81902.1| ribosome recycling factor [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 201

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 119/178 (66%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N+K RM   +S L+ +M ++RTGR + S+LD ++V+ YG+  PLNQVAN+ V EP ++ +
Sbjct: 23  NLKTRMEKAVSDLQHEMASIRTGRATLSLLDHIRVDYYGTPTPLNQVANLHVPEPNLITI 82

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WD   + ++E+ I  S+LGLNP  +G+V+R+P+P  TEERR  LVK  HA AE  +++
Sbjct: 83  QPWDVSQIGTIEKSIRTSDLGLNPANDGKVIRLPIPPLTEERRKELVKKLHAAAEHHRVA 142

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIRRDG + +KK  K  K +ED      ++IQK+TD  +  +D+  + K+KEIM  
Sbjct: 143 VRNIRRDGNEAVKKLSKDKKITEDDDKKAHDEIQKLTDLYMGKVDTAAKTKEKEIMEI 200


>gi|253687340|ref|YP_003016530.1| ribosome recycling factor [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259494550|sp|C6DAI6|RRF_PECCP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|251753918|gb|ACT11994.1| ribosome recycling factor [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 185

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/174 (45%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD ++VE YGS  PL QVANV V + R L ++V+D
Sbjct: 12  RMDKCVEAFKNQISKIRTGRASPSILDGIQVEYYGSATPLRQVANVVVEDSRTLAITVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RTLGPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D LK   K    SED     ++D+QK+TD+ IK +D+   EK+ E+M F
Sbjct: 132 RRDANDKLKALLKDKAISEDEERRAQDDVQKLTDNFIKKVDTALAEKEAELMEF 185


>gi|220934336|ref|YP_002513235.1| ribosome recycling factor [Thioalkalivibrio sp. HL-EbGR7]
 gi|254809540|sp|B8GQ53|RRF_THISH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219995646|gb|ACL72248.1| ribosome recycling factor [Thioalkalivibrio sp. HL-EbGR7]
          Length = 185

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/179 (46%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ K RMG +I  L+ ++  +RTGR   S+LD V VE YGS VP++QVANV V + R L 
Sbjct: 7   KDAKARMGKSIESLRNELAKIRTGRAHTSLLDHVMVEYYGSDVPISQVANVNVEDARTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K MV+ VE+ I  S+LGLNP   G V+R+P+P  TEERR  LVKV    AE +++
Sbjct: 67  VTPWEKTMVSKVEKAIMTSDLGLNPSSMGTVIRVPMPALTEERRRDLVKVVRGEAENARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  + LK   K  + SED     +++IQK+TDS I+ +D    EK+KE+M  
Sbjct: 127 AIRNIRRDANNALKALVKGKEISEDDERRAQDEIQKLTDSHIEEVDKVLAEKEKELMEV 185


>gi|295696146|ref|YP_003589384.1| ribosome recycling factor [Bacillus tusciae DSM 2912]
 gi|295411748|gb|ADG06240.1| ribosome recycling factor [Bacillus tusciae DSM 2912]
          Length = 184

 Score =  162 bits (409), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 119/177 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  ++RM  ++  LKK+  ++R GR +P +LD V VE YG+ +P++Q+A++T  EPR+L
Sbjct: 5   MKQAEERMNKSLQALKKEFASVRAGRATPGLLDKVTVEYYGTSMPIHQLASITAPEPRLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  +A +E+ I +S+LGL P  +GQV+R+ +P+ T+ERR  L ++    AE+S+
Sbjct: 65  VIQPWDKGALAEIEKAILKSDLGLTPTNDGQVIRLAIPQLTQERRQELARMVRKLAEESR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR+  D ++KS K G  SED    L+  IQ +TD  I+ ID     K+KEI
Sbjct: 125 VAIRNIRREANDEIRKSEKDGSVSEDEGRRLQERIQGLTDRFIEEIDRLLAAKEKEI 181


>gi|315651639|ref|ZP_07904650.1| ribosome recycling factor [Eubacterium saburreum DSM 3986]
 gi|315486093|gb|EFU76464.1| ribosome recycling factor [Eubacterium saburreum DSM 3986]
          Length = 184

 Score =  162 bits (409), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 118/178 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D+M  +I  L ++  ++R GR +P +LD +KVE YG+  P+ QV N++V EPR++
Sbjct: 5   IKKFEDKMTKSIDVLLEEYASIRAGRANPHVLDRIKVEYYGTPTPIQQVGNISVPEPRII 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S W+K ++  +E+ I+ S+LG+NP  +G  +R+  PE TEERR  LVK      E  K
Sbjct: 65  QISPWEKSLLKEIEKAINMSDLGINPTNDGSCIRLVFPELTEERRKELVKDVKKKGEACK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD +D +KK  K+G+ +ED V   EN IQKITD  I+ +D   E+K KEI+
Sbjct: 125 VAVRNIRRDAIDAVKKLEKAGEFTEDDVKDGENKIQKITDKAIERVDKAIEDKSKEIL 182


>gi|227536081|ref|ZP_03966130.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300772051|ref|ZP_07081921.1| ribosome recycling factor [Sphingobacterium spiritivorum ATCC
           33861]
 gi|227243978|gb|EEI93993.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300760354|gb|EFK57180.1| ribosome recycling factor [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 187

 Score =  162 bits (409), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/186 (45%), Positives = 124/186 (66%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQ--NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN++I LQ  + KD M   +SF + ++  +R G+ SPSMLD + V+ YGS  PL QV+NV
Sbjct: 1   MNELISLQLDDCKDSMTKAVSFAESELTKIRAGKASPSMLDGISVDYYGSPTPLAQVSNV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R +V+  W+K +++++E+ I +SNLGLNP  +G V+R+ VP  TEERR  LVK A
Sbjct: 61  NTTDARTIVIQPWEKSLISAIEKAIIDSNLGLNPQNDGIVIRLVVPALTEERRRDLVKKA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AEK +I++RNIR+D  + +KK +  G ASED +   E ++QK+TDS I  +D   E 
Sbjct: 121 KEEAEKGRIAIRNIRKDTNESIKKLKNDG-ASEDEIKVGEAEVQKLTDSFIVQVDKLAEL 179

Query: 179 KKKEIM 184
           K+K+IM
Sbjct: 180 KEKDIM 185


>gi|290968867|ref|ZP_06560404.1| ribosome recycling factor [Megasphaera genomosp. type_1 str. 28L]
 gi|290781163|gb|EFD93754.1| ribosome recycling factor [Megasphaera genomosp. type_1 str. 28L]
          Length = 186

 Score =  162 bits (409), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 122/179 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +QN +++M  TI  LK+D  ++RTGR S S+LD V VE YG+  P+ QVANV+  EP ++
Sbjct: 7   VQNYEEKMDKTIEALKRDFTSIRTGRASTSLLDRVTVEYYGTPTPIKQVANVSAPEPSLI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+++++  +E+ I +S+LGLNP  +G ++R+ +P+ TEERR  L K    YAE++K
Sbjct: 67  TIVPWERKILGDIEKAILKSDLGLNPNNDGAMIRLEIPKPTEERRKELTKKVSKYAEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           + +RNIRRD  D +KK+ K+ + +ED    +++ IQK+TD  +K ID    +K+KE+M 
Sbjct: 127 VVIRNIRRDANDSIKKAEKAKEITEDESKDVQDKIQKLTDKKVKFIDELKLKKEKEVME 185


>gi|260892482|ref|YP_003238579.1| ribosome recycling factor [Ammonifex degensii KC4]
 gi|260864623|gb|ACX51729.1| ribosome recycling factor [Ammonifex degensii KC4]
          Length = 184

 Score =  161 bits (408), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 117/172 (68%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   KKD+  +RTGR SP++L+ V V+ YG   P+NQ+A +T  EPR+LV+  WD+
Sbjct: 12  MKKAVEHFKKDLAAIRTGRASPALLEKVMVDYYGVPTPVNQLATITAPEPRLLVIQPWDR 71

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +E+ I +S+LGL P  +GQV+R+ +P+ T+ERR  LV+VA   AE++++++RNIR
Sbjct: 72  SIINEIEKAILKSDLGLTPNNDGQVIRLILPQLTQERREELVRVARKRAEEARVAIRNIR 131

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R+  D LK+ +K    SED +  L+ ++QK+T+  IK +D+    K+KEIM 
Sbjct: 132 REANDELKEKQKKENVSEDEIKRLQGEVQKLTEKYIKEVDNLLAAKEKEIME 183


>gi|223041490|ref|ZP_03611693.1| ribosome recycling factor [Actinobacillus minor 202]
 gi|240948667|ref|ZP_04753039.1| ribosome recycling factor [Actinobacillus minor NM305]
 gi|223017748|gb|EEF16155.1| ribosome recycling factor [Actinobacillus minor 202]
 gi|240296883|gb|EER47461.1| ribosome recycling factor [Actinobacillus minor NM305]
          Length = 185

 Score =  161 bits (408), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL QVANV   + R L 
Sbjct: 7   KDTQDRMEKSLDALKSHISKIRTGRAQPSLLDGIQVEYYGSATPLRQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ KI
Sbjct: 67  VNVFDRSLISAVEKAILTSDLGLNPSSAGATIRVPLPPLTEERRRDLIKIVKGEGEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     +++IQKITDS IK +D     K+KE++ F
Sbjct: 127 AIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDSYIKKVDEVLAAKEKELLDF 185


>gi|320535432|ref|ZP_08035541.1| ribosome recycling factor [Treponema phagedenis F0421]
 gi|320147719|gb|EFW39226.1| ribosome recycling factor [Treponema phagedenis F0421]
          Length = 184

 Score =  161 bits (408), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 119/174 (68%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M  +I+ LK D  TLRTGR S S+ + ++VE YG   PLNQVA++++ E R++V+  
Sbjct: 9   EEKMKKSIAALKDDFNTLRTGRASASLFEKIRVECYGELSPLNQVASISIPEARLVVIQP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK ++ ++E+ I +S L LNP  +G+++RI +P  TE+RR  L K A   AE+S+I++R
Sbjct: 69  WDKSLLPNIEKAILKSELSLNPSNDGKIIRIAIPPLTEDRRKELAKQAKNIAEQSRIAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRRDG++  KK +K G  SED + + E   QK TD+ I  I++   EK+KEI+
Sbjct: 129 NIRRDGIEEAKKLQKEGSLSEDDLKTAEEKFQKATDAHISEINTILAEKEKEIL 182


>gi|225574998|ref|ZP_03783608.1| hypothetical protein RUMHYD_03077 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037845|gb|EEG48091.1| hypothetical protein RUMHYD_03077 [Blautia hydrogenotrophica DSM
           10507]
          Length = 183

 Score =  161 bits (408), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 117/178 (65%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ   D+M  T   L+ D+ T+R GR +P +LD ++V+ YG+  PL QVAN+TV EPR++
Sbjct: 5   LQKYDDKMSKTKKSLEADLATIRAGRANPHILDKIQVDYYGTPSPLQQVANITVPEPRVI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+ +MV  + + I  S+LG+NP  +G+++R+ +PE TEERR  LVK      E +K
Sbjct: 65  QIQPWEAKMVKEISKAILSSDLGINPNTDGKMIRLILPELTEERRKELVKDVKKRGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD  D  KK  K+   SED V  LE+ IQK+TD  +K IDS  E+K KEI+
Sbjct: 125 VAIRNIRRDANDAFKKLAKAD-VSEDEVKELEDKIQKMTDKAVKEIDSTVEQKSKEIL 181


>gi|298529658|ref|ZP_07017061.1| ribosome recycling factor [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511094|gb|EFI34997.1| ribosome recycling factor [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 184

 Score =  161 bits (408), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 125/186 (67%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+QV+D  + +++M   I+ L KD+  LRTGR S  ++D + VE YG+  PLNQ+A++++
Sbjct: 1   MDQVLD--DCREKMDKAIASLDKDLAKLRTGRASVGLVDGITVEYYGTMTPLNQLASISI 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + +  WD+ + + +E+ I +S+LGLNP+ +G+++RI +P  TEERR  LVK+A  
Sbjct: 59  PDSRTIAIQPWDRNVFSGIEKAIMKSDLGLNPVSDGKIIRINIPPLTEERRKDLVKMAKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y+E +K+++RN+RR+  D LKK +     +ED +     ++QKITDS +  +D    +K+
Sbjct: 119 YSEDAKVALRNVRREANDTLKKMKNDKDLTEDEMHKGHEEVQKITDSYVSKVDRILADKE 178

Query: 181 KEIMHF 186
           KEIM F
Sbjct: 179 KEIMEF 184


>gi|256830146|ref|YP_003158874.1| ribosome recycling factor [Desulfomicrobium baculatum DSM 4028]
 gi|256579322|gb|ACU90458.1| ribosome recycling factor [Desulfomicrobium baculatum DSM 4028]
          Length = 184

 Score =  161 bits (407), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 121/179 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+  +RM  +I  L+KD   LRTGR S +++D ++VE YG+  PLNQVA+V++ + R + 
Sbjct: 6   QDCTNRMQKSIDSLEKDFSKLRTGRASTALVDSIRVEYYGTPTPLNQVASVSIPDSRTIS 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S WD+    S+E+ I +S+LGL PI +G+ +RI +P  TEERR  LVK+A  Y E++K+
Sbjct: 66  ISPWDRNAFNSIEKAIMKSDLGLTPINDGRAIRINIPVLTEERRKDLVKMAKKYTEEAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D LKK   + + SED +   ++++QK TD+ +K  D+   EK+KEIM  
Sbjct: 126 AIRNVRRDVNDALKKMHTAKEISEDDLHKAQDEVQKTTDNFVKKADAVLAEKEKEIMEI 184


>gi|256003336|ref|ZP_05428327.1| ribosome recycling factor [Clostridium thermocellum DSM 2360]
 gi|281417721|ref|ZP_06248741.1| ribosome recycling factor [Clostridium thermocellum JW20]
 gi|255992626|gb|EEU02717.1| ribosome recycling factor [Clostridium thermocellum DSM 2360]
 gi|281409123|gb|EFB39381.1| ribosome recycling factor [Clostridium thermocellum JW20]
 gi|316940242|gb|ADU74276.1| ribosome recycling factor [Clostridium thermocellum DSM 1313]
          Length = 183

 Score =  161 bits (407), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 124/180 (68%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           + +NI+++M  T+S LK ++ T+R GR + ++LD + V+ YG   P+NQ+  ++V EPR+
Sbjct: 3   EYKNIEEKMKKTVSVLKDELNTVRAGRANAAILDRITVDYYGVPTPINQLGTISVPEPRV 62

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+  WD +++  +E+ I +S++G+NP  +G+V+R+  P  TEERR  L K+A  Y E +
Sbjct: 63  IVIQPWDAQILKEIEKEIQKSDIGINPNNDGKVIRLVFPPLTEERRKELTKLAKKYGEDA 122

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++R+IRRDG++ +K  +K+G+ +ED + S E DIQ +TD  I  ID   E K+KEI+ 
Sbjct: 123 KVAIRSIRRDGIEKMKAMKKNGEITEDDLKSAEKDIQNLTDKYIAEIDKLIEIKEKEILE 182


>gi|242240394|ref|YP_002988575.1| ribosome recycling factor [Dickeya dadantii Ech703]
 gi|242132451|gb|ACS86753.1| ribosome recycling factor [Dickeya dadantii Ech703]
          Length = 185

 Score =  161 bits (407), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YGS  PL Q+AN+ V + R L V+V+D
Sbjct: 12  RMDKCVEAFKSQIGKIRTGRASPSLLDGIHVEYYGSATPLRQLANIVVEDARTLAVTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RTMGPAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKVVRGDAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D LK   K    SED     +++IQK+TDS IK +D+   +K+KE+M F
Sbjct: 132 RRDANDKLKVLLKDKTISEDEERRAQDEIQKLTDSFIKKVDAALADKEKELMDF 185


>gi|332284282|ref|YP_004416193.1| ribosome recycling factor [Pusillimonas sp. T7-7]
 gi|330428235|gb|AEC19569.1| ribosome recycling factor [Pusillimonas sp. T7-7]
          Length = 186

 Score =  161 bits (407), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 81/177 (45%), Positives = 115/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+++ RMG +I  LK  +  +RTGR    +LD V+VE YGS VP++QVAN+ +L+ R + 
Sbjct: 8   QSVESRMGKSIETLKVGLSKIRTGRAHAGILDHVQVEYYGSPVPVSQVANINLLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VW+K M   VE+ I +S+LGLNPI  G  +R+P+P  TEERR  L KV     E +KI
Sbjct: 68  VQVWEKSMAGPVEKAIRDSDLGLNPIAMGDSIRVPMPALTEERRRDLTKVVRTEGEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  D LKK  K  + SED    +++++QK+TD  +  ID    +K+ EIM
Sbjct: 128 AVRNLRRDANDSLKKLVKDKEISEDDERRMQDEVQKLTDKHVAEIDKLVAQKEAEIM 184


>gi|228475010|ref|ZP_04059738.1| ribosome recycling factor [Staphylococcus hominis SK119]
 gi|314936580|ref|ZP_07843927.1| ribosome recycling factor [Staphylococcus hominis subsp. hominis
           C80]
 gi|228270995|gb|EEK12383.1| ribosome recycling factor [Staphylococcus hominis SK119]
 gi|313655199|gb|EFS18944.1| ribosome recycling factor [Staphylococcus hominis subsp. hominis
           C80]
          Length = 184

 Score =  161 bits (407), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 80/180 (44%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q+ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+L
Sbjct: 5   IQDTKSRMKKSIENLSRELANISAGRANSNLLNGVNVDYYGAPTPVQQLASINVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK      E SK
Sbjct: 65  VISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRITVPALTEERRKELVKNVKKIGEDSK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D LKK  K+G  +ED + S   D+QK+TD++IK ID+  +EK+K+IM  
Sbjct: 125 VSIRNIRRDINDQLKKDEKNGDITEDDLRSQTEDVQKVTDNSIKEIDNLVDEKEKDIMSV 184


>gi|237736212|ref|ZP_04566693.1| ribosome recycling factor [Fusobacterium mortiferum ATCC 9817]
 gi|229421765|gb|EEO36812.1| ribosome recycling factor [Fusobacterium mortiferum ATCC 9817]
          Length = 188

 Score =  160 bits (406), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/176 (46%), Positives = 117/176 (66%), Gaps = 2/176 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            K++MG  +   K    ++R GR + SMLD +KVE YGS +PLNQV +V+  E R+LV+ 
Sbjct: 10  CKEKMGKAVEATKHKFTSIRAGRANVSMLDGIKVEQYGSEMPLNQVGSVSAPEARLLVID 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  +NLGL P  +G+V+R+ +PE T +RR   VK+A + AE  K++V
Sbjct: 70  PWDKSLIGKIEKAIIAANLGLTPNNDGKVIRLIMPELTADRRKEYVKMAKSEAENGKVAV 129

Query: 130 RNIRRDGMDHLKK--SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RNIR+DG + LKK    K    SED V +LE +IQK+TD+ IK ID  F +K+KEI
Sbjct: 130 RNIRKDGNNDLKKLLKDKENPVSEDEVKNLEAEIQKLTDAHIKEIDELFAKKEKEI 185


>gi|127513560|ref|YP_001094757.1| ribosome recycling factor [Shewanella loihica PV-4]
 gi|166231226|sp|A3QGA0|RRF_SHELP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|126638855|gb|ABO24498.1| ribosome recycling factor [Shewanella loihica PV-4]
          Length = 185

 Score =  160 bits (406), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 111/178 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ K RM   +   K  M  +RTGR  PS+LD +KV  YG+  PL QV NV++ + R L 
Sbjct: 7   EDAKSRMAKCVEATKNQMAKVRTGRAHPSLLDSIKVPYYGTPTPLKQVGNVSIEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D  M+A+VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KV  A AE  +I
Sbjct: 67  ITVFDTTMIAAVEKAIMSSDLGLNPMSAGTTIRIPLPALTEERRKDLIKVVRAEAENGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +VRN+RRD    +K   K  + +ED V   E++IQK TD+ IK ID     K+ E+M 
Sbjct: 127 AVRNVRRDANSDVKALEKEKECTEDDVRRTEDEIQKFTDAHIKQIDEILTAKEAELME 184


>gi|15895066|ref|NP_348415.1| ribosome recycling factor [Clostridium acetobutylicum ATCC 824]
 gi|22001946|sp|Q97I63|RRF_CLOAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|15024762|gb|AAK79755.1|AE007688_4 Ribosome recycling factor [Clostridium acetobutylicum ATCC 824]
 gi|325509204|gb|ADZ20840.1| ribosome recycling factor [Clostridium acetobutylicum EA 2018]
          Length = 185

 Score =  160 bits (406), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ ++++M  +IS LKK++ +++ GR +P+MLD ++V+ YG+  PLNQ+AN++V E R+L
Sbjct: 6   IKELEEKMTKSISALKKELTSMKAGRANPAMLDRIEVDYYGTMTPLNQLANISVPESRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  + S+E+ I  S+LGLNP  +G  +R+ +PE TEE R  +VK      E  K
Sbjct: 66  MIQPWDKSAMKSIEKAILISDLGLNPSNDGTTMRLVIPELTEETRKNIVKNVKKAGEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R IRRD  D +K  +K    +ED + S ENDIQK TDS +K ID   E K+KEIM  
Sbjct: 126 VALRAIRRDANDKVKSLKKDNSITEDEMKSAENDIQKKTDSYVKEIDKMVEAKEKEIMSI 185


>gi|315144762|gb|EFT88778.1| ribosome recycling factor [Enterococcus faecalis TX2141]
          Length = 185

 Score =  160 bits (406), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 124/179 (69%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L++++  +R GR + S+LD ++V+ YG+  P+NQ+A++ + E R+L
Sbjct: 6   LATAKEKMTKAEESLRRELGQIRAGRANASLLDRIQVKYYGAPTPVNQLASINIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A +E+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE SK
Sbjct: 66  MITPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD MD LKK++K+G  +ED + S E D+QK+TD +IKNID+   EK++E++ 
Sbjct: 126 VAVRNVRRDAMDELKKAQKNGDITEDELRSFEKDVQKLTDDSIKNIDAITAEKEQELLE 184


>gi|148270514|ref|YP_001244974.1| ribosome recycling factor [Thermotoga petrophila RKU-1]
 gi|166231525|sp|A5IMH5|RRF_THEP1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|147736058|gb|ABQ47398.1| ribosome recycling factor [Thermotoga petrophila RKU-1]
          Length = 185

 Score =  160 bits (406), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M  T+  ++ ++  +RTG+ SP++L+ +KV+ YG   P+NQ+A ++V E R L
Sbjct: 6   IKEAKEKMKKTLERIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISVSEERTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ I+ S+LGLNPI +G V+R+  P  T E+R   VK A    E+ K
Sbjct: 66  VIKPWDKSVLSLIEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD +  +K+ +K GK  ED    LEN+IQK+TD  I+N+D  FE KK+EIM F
Sbjct: 126 IAIRNIRRDILKKIKEDQKEGKIPEDDAKRLENEIQKLTDEFIENLDKVFEIKKEEIMEF 185


>gi|332637898|ref|ZP_08416761.1| ribosome recycling factor [Weissella cibaria KACC 11862]
          Length = 185

 Score =  160 bits (405), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 121/185 (65%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N ++D  N  +RMG     L++++  +R G  +PS+L  V  E YG+  PLNQ+A++TV 
Sbjct: 3   NPILDSAN--ERMGKAADVLRRELGNIRAGVANPSILRNVTAEYYGAPTPLNQLASITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+++ +DK ++  +E+ I  S+LGL P  +G V+R+ +P  TEE R +L K     
Sbjct: 61  EARVLLITPFDKSILKDIEQAIFASDLGLTPANDGSVIRLVIPALTEETRKSLAKEVKGE 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +EK+K++VRN+RRD MD  KK+ K+G  SED    LE+DIQK TD+ +KNID    EK+K
Sbjct: 121 SEKAKVAVRNVRRDAMDDAKKALKNGDMSEDEARKLEDDIQKATDAAVKNIDGIAAEKEK 180

Query: 182 EIMHF 186
           E++  
Sbjct: 181 ELLTI 185


>gi|228477911|ref|ZP_04062525.1| ribosome recycling factor [Streptococcus salivarius SK126]
 gi|228250401|gb|EEK09641.1| ribosome recycling factor [Streptococcus salivarius SK126]
          Length = 185

 Score =  160 bits (405), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 117/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD + VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFAHSHESLAREFGSIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKGSIADIERAINESDLGINPANDGSVVRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K  + +ED + +LE DIQK TD  +K IDS   EK+KE++
Sbjct: 126 IAIRNIRRDAMDEAKKQEKDKEITEDQLKALEKDIQKATDDAVKKIDSMTAEKEKELL 183


>gi|226313032|ref|YP_002772926.1| ribosome recycling factor [Brevibacillus brevis NBRC 100599]
 gi|254809495|sp|C0ZF63|RRF_BREBN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226095980|dbj|BAH44422.1| ribosome recycling factor [Brevibacillus brevis NBRC 100599]
          Length = 185

 Score =  160 bits (405), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 123/186 (66%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M Q + L +++DRM   I+ LK+D+ +LR GR +P+MLD V V+ YG+  P++Q+AN++V
Sbjct: 1   MPQTV-LNDMEDRMNKAINALKRDLSSLRAGRANPAMLDRVTVDYYGTPTPISQLANISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML +  WDK  +  ++R + +S+LG++P  +G ++R+ +P  TEERR  LVK+A  
Sbjct: 60  PEPRMLTIQPWDKTALKEIDRALQQSDLGISPSNDGVIIRLIIPPLTEERRKELVKLAGK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++K+++RNIRRD  D +KK  K+   SED     +  IQK TD  I  +D   ++K+
Sbjct: 120 GGEEAKVAIRNIRRDANDEIKKLEKAATISEDDSRRHQETIQKTTDKFIAEVDKIVKDKE 179

Query: 181 KEIMHF 186
           K+I+  
Sbjct: 180 KDILEV 185


>gi|193215251|ref|YP_001996450.1| ribosome recycling factor [Chloroherpeton thalassium ATCC 35110]
 gi|193088728|gb|ACF14003.1| ribosome recycling factor [Chloroherpeton thalassium ATCC 35110]
          Length = 187

 Score =  160 bits (405), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 83/179 (46%), Positives = 111/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + RM  +I  ++ +   +RTG+ S  +LD +KVEAYG  +PL QV NV  L+ R L
Sbjct: 8   LSDAESRMQKSIENVRHEFAAIRTGKASAGLLDGIKVEAYGQAMPLKQVGNVGTLDSRTL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWDK MVA+VE+ I +SNLGLNP  +GQ +RIPVP  TEERR   VKV    AE+ K
Sbjct: 68  TVQVWDKGMVATVEKAIRDSNLGLNPATDGQTIRIPVPPLTEERRKEYVKVTKKQAEEGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD    + K  K    +ED  A  + DI  +T    K++D    +K+KEIM 
Sbjct: 128 VAVRNIRRDANHAIDKLEKEKLITEDEKARAKKDIDNLTHKYEKSLDELTSKKEKEIME 186


>gi|312898662|ref|ZP_07758052.1| ribosome recycling factor [Megasphaera micronuciformis F0359]
 gi|310620581|gb|EFQ04151.1| ribosome recycling factor [Megasphaera micronuciformis F0359]
          Length = 186

 Score =  160 bits (405), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 77/170 (45%), Positives = 115/170 (67%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
           TI   K+++ ++RTGR S S+LD V V+ YG+  P+NQVANV+  EPR++ +S W++ M+
Sbjct: 17  TIENFKRNLSSIRTGRASTSLLDRVSVDYYGTPTPVNQVANVSAPEPRLITISPWERTML 76

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
             +E+ I +S+LGLNP  +G ++R+ +P+ TEERR  L K     AE +K++VRNIRRD 
Sbjct: 77  GEIEKAILKSDLGLNPNNDGTIIRLEIPQLTEERRKELSKKVGKEAEDAKVAVRNIRRDS 136

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            D +KKS K  + +ED     +  IQKITD+ IK ID   ++K+KE+M  
Sbjct: 137 NDAVKKSEKKKEITEDDSKEAQTKIQKITDAKIKQIDEIKDKKEKEVMEV 186


>gi|300933102|ref|ZP_07148358.1| ribosome recycling factor [Corynebacterium resistens DSM 45100]
          Length = 185

 Score =  160 bits (405), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 119/176 (67%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM  ++   ++++ T+RTGR +P+M + +  E YG   P+ Q+A ++V EPRML++  
Sbjct: 10  EERMTSSVEHAREELTTIRTGRANPAMFNGIIAEYYGVPTPITQMATISVPEPRMLIIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++   +  +E  I  S+LG+NP  +GQVLR+ VP+ TEERR  LVKVA +  E +KI++R
Sbjct: 70  YEASTMQDIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRRDLVKVAKSKGEDAKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRR GM+ L K +K G+A ED V + E D++K+T + ++ +D+  E K+KE+M  
Sbjct: 130 NIRRKGMEGLGKIQKDGEAGEDEVKAAEKDLEKVTQNHVEQVDALVENKEKELMEV 185


>gi|296117647|ref|ZP_06836231.1| ribosome recycling factor [Corynebacterium ammoniagenes DSM 20306]
 gi|295969378|gb|EFG82619.1| ribosome recycling factor [Corynebacterium ammoniagenes DSM 20306]
          Length = 185

 Score =  160 bits (405), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 119/175 (68%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM +++   +++++T+RTGR +PSM + V  E YG   P+ Q+++++V EPRML++  
Sbjct: 10  EERMANSVEHTREELVTIRTGRANPSMFNGVVAEYYGVPTPITQMSSISVPEPRMLLIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +++ M+  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  LVKVA +  E  KI++R
Sbjct: 70  YEQSMMGEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDLVKVAKSKGEDGKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR  M+ LKK +K G A ED +A+ E +++KIT   I+ +D     K+ E+M 
Sbjct: 130 NIRRKAMEQLKKLQKDGDAGEDEIAAAEKEMEKITHGYIEQVDKLVANKEAELME 184


>gi|145300058|ref|YP_001142899.1| ribosome recycling factor [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166230408|sp|A4SQH9|RRF_AERS4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|142852830|gb|ABO91151.1| ribosome recycling factor [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 185

 Score =  160 bits (405), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 113/178 (63%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + KDRM  ++  LK  M  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L +
Sbjct: 8   DAKDRMAKSVESLKTQMSKIRTGRAHPSLLDGIQVEYYGAATPLKQLANVVAEDARTLSI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S++D+ M+ +VE+ I  S+LGLNP   GQ LR+P+P  TEERR  L K+  A AE ++++
Sbjct: 68  SIFDRSMIQAVEKAILTSDLGLNPSSNGQTLRVPLPPLTEERRRDLTKIVRAEAEGARVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIRRD    LK   K  + SED     + +IQK+TDS IK +D     K+KE+M  
Sbjct: 128 VRNIRRDANADLKALLKDKEISEDDDRRAQEEIQKLTDSFIKLVDDALAAKEKELMEI 185


>gi|164687908|ref|ZP_02211936.1| hypothetical protein CLOBAR_01553 [Clostridium bartlettii DSM
           16795]
 gi|164602321|gb|EDQ95786.1| hypothetical protein CLOBAR_01553 [Clostridium bartlettii DSM
           16795]
          Length = 184

 Score =  160 bits (404), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 116/177 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  TI  LK +  T+R GR +  MLD ++V+ YG+  P+NQ+ +++V EPR LV
Sbjct: 6   KKLQAQMDKTIEALKYEFSTIRAGRANAQMLDKIRVDYYGTPTPINQIGSISVPEPRTLV 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WDK  +  +E+ I  S+LGLNP  +G V+R+ VP  TEERR+ L K A   AE+ K+
Sbjct: 66  INPWDKSAMKEIEKAIMNSDLGLNPTNDGDVIRLNVPALTEERRIELTKKAKKAAEEFKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            +RN RRD  D LKK +K G+ +ED +   + D+QK+TD  IK IDS    K+K+IM
Sbjct: 126 RIRNERRDANDKLKKMQKDGEITEDELKRGQEDVQKLTDKYIKEIDSLLAVKEKDIM 182


>gi|70726656|ref|YP_253570.1| ribosome recycling factor [Staphylococcus haemolyticus JCSC1435]
 gi|123660049|sp|Q4L5W1|RRF_STAHJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|68447380|dbj|BAE04964.1| ribosome recycling factor [Staphylococcus haemolyticus JCSC1435]
          Length = 184

 Score =  160 bits (404), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q+ K RM  +I  L +++  +  GR + ++L  V V+ YG+  P+ Q+A++ V E R+L
Sbjct: 5   IQDTKARMSKSIDNLSRELANISAGRANSNLLSGVTVDYYGAPTPVQQLASINVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK  VA +E+ I+ +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K
Sbjct: 65  VISPYDKSSVADIEKAIYAANLGVNPTSDGEVIRITVPALTEERRKELVKNVKKIGEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D LKK  K+G  +ED + S   D+QK TD++IK ID   E+K+K+IM  
Sbjct: 125 VSIRNIRRDINDQLKKDEKNGDITEDDLRSQTEDVQKATDNSIKEIDQLVEDKEKDIMSV 184


>gi|328948074|ref|YP_004365411.1| ribosome-recycling factor [Treponema succinifaciens DSM 2489]
 gi|328448398|gb|AEB14114.1| Ribosome-recycling factor [Treponema succinifaciens DSM 2489]
          Length = 179

 Score =  160 bits (404), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 119/173 (68%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T++ LK++  ++RTGR S ++ D V+V+ YG+  PLNQV N+++ E R +V+S +D
Sbjct: 7   RMEKTVNSLKEEYKSIRTGRASAAIFDKVRVDYYGTPTPLNQVGNISIPEARTIVISPFD 66

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  +E+ I ++ LGLNP  +G+V+RI +P  T +RR  LVK A A AE  + ++RNI
Sbjct: 67  KSIMGDIEKAIQKAELGLNPNNDGKVIRIAIPPLTADRRKELVKQAKATAENYRTTIRNI 126

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRDG + LKK +K+G+ +ED + +    +QK+TD  I+ I+  +E K+KEIM 
Sbjct: 127 RRDGNEDLKKQQKAGELTEDQLKTETEKLQKLTDKYIEEINGIYEAKEKEIME 179


>gi|30263828|ref|NP_846205.1| ribosome recycling factor [Bacillus anthracis str. Ames]
 gi|47529252|ref|YP_020601.1| ribosome recycling factor [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186674|ref|YP_029926.1| ribosome recycling factor [Bacillus anthracis str. Sterne]
 gi|65321151|ref|ZP_00394110.1| COG0233: Ribosome recycling factor [Bacillus anthracis str. A2012]
 gi|170706904|ref|ZP_02897362.1| ribosome recycling factor [Bacillus anthracis str. A0389]
 gi|229604313|ref|YP_002868062.1| ribosome recycling factor [Bacillus anthracis str. A0248]
 gi|33301536|sp|Q81WL1|RRF_BACAN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809489|sp|C3P5M6|RRF_BACAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|30258472|gb|AAP27691.1| ribosome recycling factor [Bacillus anthracis str. Ames]
 gi|47504400|gb|AAT33076.1| ribosome recycling factor [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180601|gb|AAT55977.1| ribosome recycling factor [Bacillus anthracis str. Sterne]
 gi|170128322|gb|EDS97191.1| ribosome recycling factor [Bacillus anthracis str. A0389]
 gi|229268721|gb|ACQ50358.1| ribosome recycling factor [Bacillus anthracis str. A0248]
          Length = 185

 Score =  160 bits (404), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 81/184 (44%), Positives = 120/184 (65%), Gaps = 2/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
            QV+   N  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV 
Sbjct: 3   QQVLKFSN--EKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+LV+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   Y
Sbjct: 61  EARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKY 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE++K++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+K
Sbjct: 121 AEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEK 180

Query: 182 EIMH 185
           EIM 
Sbjct: 181 EIME 184


>gi|217970577|ref|YP_002355811.1| ribosome recycling factor [Thauera sp. MZ1T]
 gi|217507904|gb|ACK54915.1| ribosome recycling factor [Thauera sp. MZ1T]
          Length = 185

 Score =  160 bits (404), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +NI+ +M  ++  LK D+  +RTGR    +LD V VE YGS VP+NQVAN+T+++ R + 
Sbjct: 7   KNIEQKMLKSVEALKTDLAKVRTGRAHTGLLDHVMVEYYGSMVPVNQVANITLIDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M+  VER I +S+LGLNP   G++LR+P+P  TEERR  L KV     E +K+
Sbjct: 67  VQTWEKPMLGKVERAIRDSDLGLNPANMGELLRVPMPALTEERRRDLTKVVRHEGETAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRDG   LK + K    SED     E++IQK+TD  +  ID    +K++E+M  
Sbjct: 127 AIRNLRRDGNQQLKDAVKDKAISEDDERRGEDEIQKLTDRYVAEIDKLLAQKEQELMQI 185


>gi|281412821|ref|YP_003346900.1| ribosome recycling factor [Thermotoga naphthophila RKU-10]
 gi|281373924|gb|ADA67486.1| ribosome recycling factor [Thermotoga naphthophila RKU-10]
          Length = 185

 Score =  160 bits (404), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M  T+  ++ ++  +RTG+ SP++L+ +KV+ YG   P+NQ+A ++V E R L
Sbjct: 6   IKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISVSEERTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ I+ S+LGLNPI +G V+R+  P  T E+R   VK A    E+ K
Sbjct: 66  VIKPWDKSVLSLIEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD +  +K+ +K GK  ED    LEN+IQK+TD  I+N+D  FE KK+EIM F
Sbjct: 126 IAIRNIRRDILKKIKEDQKEGKIPEDDAKRLENEIQKLTDEFIENLDKVFEIKKEEIMEF 185


>gi|167854950|ref|ZP_02477725.1| ribosome releasing factor [Haemophilus parasuis 29755]
 gi|219870409|ref|YP_002474784.1| ribosome recycling factor [Haemophilus parasuis SH0165]
 gi|254809514|sp|B8F3D4|RRF_HAEPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167853907|gb|EDS25146.1| ribosome releasing factor [Haemophilus parasuis 29755]
 gi|219690613|gb|ACL31836.1| ribosome recycling factor [Haemophilus parasuis SH0165]
          Length = 185

 Score =  160 bits (404), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L 
Sbjct: 7   KDTQERMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ K+
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  D +K   K  + SE+     ++DIQKITD  IK +D    +K+KE+M F
Sbjct: 127 SIRNIRRDANDKIKTLEKEKQISENDERKAQDDIQKITDIYIKKVDEILADKEKELMDF 185


>gi|229545182|ref|ZP_04433907.1| ribosome recycling factor [Enterococcus faecalis TX1322]
 gi|229309727|gb|EEN75714.1| ribosome recycling factor [Enterococcus faecalis TX1322]
          Length = 185

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 123/179 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L++++  +R GR + S+LD ++VE YG+  P+NQ+A++ + E R+L
Sbjct: 6   LATAKEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A +E+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE SK
Sbjct: 66  MITPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD MD LKK++K+   +ED + S E D+QK+TD +IKNID+   EK++E++ 
Sbjct: 126 VAVRNVRRDAMDELKKAQKNSDITEDELRSFEKDVQKLTDDSIKNIDAITAEKEQELLE 184


>gi|52425984|ref|YP_089121.1| ribosome recycling factor [Mannheimia succiniciproducens MBEL55E]
 gi|60390244|sp|Q65R74|RRF_MANSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|52308036|gb|AAU38536.1| Frr protein [Mannheimia succiniciproducens MBEL55E]
          Length = 185

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++V+ YGS  PL Q+ANV   + R L 
Sbjct: 7   KDTQDRMEKSLEALKGHIAKIRTGRAQPSLLDAIQVDYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ K+
Sbjct: 67  VTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E +IQKITDS IK +D    EK+KE+M F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENDQRKAEEEIQKITDSYIKKVDEVLAEKEKELMDF 185


>gi|312864198|ref|ZP_07724432.1| ribosome recycling factor [Streptococcus vestibularis F0396]
 gi|322517322|ref|ZP_08070197.1| ribosome recycling factor [Streptococcus vestibularis ATCC 49124]
 gi|311100199|gb|EFQ58408.1| ribosome recycling factor [Streptococcus vestibularis F0396]
 gi|322124019|gb|EFX95572.1| ribosome recycling factor [Streptococcus vestibularis ATCC 49124]
          Length = 185

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 116/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++   +R GR + S+LD + VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFAHSHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKGSIADIERAINESDLGINPANDGSVVRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K  + +ED + +LE DIQK TD  +K IDS   EK+KE++
Sbjct: 126 IAIRNIRRDAMDEAKKQEKDKEITEDQLKALEKDIQKATDDAVKKIDSMTAEKEKELL 183


>gi|126173691|ref|YP_001049840.1| ribosome recycling factor [Shewanella baltica OS155]
 gi|217974057|ref|YP_002358808.1| ribosome recycling factor [Shewanella baltica OS223]
 gi|304409565|ref|ZP_07391185.1| ribosome recycling factor [Shewanella baltica OS183]
 gi|307303923|ref|ZP_07583676.1| ribosome recycling factor [Shewanella baltica BA175]
 gi|166231224|sp|A3D2K8|RRF_SHEB5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809529|sp|B8E7R3|RRF_SHEB2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|125996896|gb|ABN60971.1| ribosome recycling factor [Shewanella baltica OS155]
 gi|217499192|gb|ACK47385.1| ribosome recycling factor [Shewanella baltica OS223]
 gi|304352083|gb|EFM16481.1| ribosome recycling factor [Shewanella baltica OS183]
 gi|306912821|gb|EFN43244.1| ribosome recycling factor [Shewanella baltica BA175]
          Length = 185

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/183 (44%), Positives = 114/183 (62%), Gaps = 4/183 (2%)

Query: 7   LQNIK----DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           ++NIK    +RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV V +
Sbjct: 2   IENIKKDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVED 61

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R L V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV    A
Sbjct: 62  SRTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRNEA 121

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E  +I++RN+RRD +  +KK  K+   +ED V   E ++QK TD+ IK ID     K+ E
Sbjct: 122 ENGRIAIRNVRRDAISEVKKLEKAKACTEDDVRRSEEEVQKFTDAHIKKIDEILAAKEIE 181

Query: 183 IMH 185
           +M 
Sbjct: 182 LME 184


>gi|206603564|gb|EDZ40044.1| Ribosome recycling factor [Leptospirillum sp. Group II '5-way CG']
          Length = 184

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 124/179 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL+  + ++   + F KK++ TLRTGR S S+L+ VK+  YG+   +++VA++ +++ R+
Sbjct: 4   DLKEPQKKLESAVEFFKKEIQTLRTGRPSLSLLENVKISYYGNPSSVDKVASLNIMDNRI 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+S WD +M+  +E+ I  +N+GL P  +G+V+RI VP  TEERR  +VK+    AE +
Sbjct: 64  IVISPWDMKMIPEIEKAIMAANIGLTPQNDGKVIRIAVPPMTEERRKQMVKLLKKMAEDA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KI++RNIRRDG D LKK +  G   ED +  L++++QKITD T++ +D   ++K++EIM
Sbjct: 124 KIAIRNIRRDGNDELKKKKSDGLIQEDRLKKLQDELQKITDQTVQKVDDLTQKKEQEIM 182


>gi|124516676|gb|EAY58184.1| ribosome recycling factor [Leptospirillum rubarum]
          Length = 184

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 125/179 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL+  + ++   + F KK++ TLRTGR S S+L+ VKV  YG+   +++VA++ +++ R+
Sbjct: 4   DLKEPQKKLESAVEFFKKEIQTLRTGRPSLSLLENVKVSYYGNPSSVDKVASLNIMDNRI 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+S WD +M+  +E+ I  +N+GL P  +G+V+RI VP  TEERR  +VK+    AE++
Sbjct: 64  IVISPWDMKMIPEIEKAILAANIGLTPQNDGKVIRIAVPPMTEERRKQMVKLLKKMAEEA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KI++RNIRRDG D LKK +  G   ED +  L++++QK+TD T++ ID   ++K++EIM
Sbjct: 124 KIAIRNIRRDGNDELKKKKSDGLIQEDRLKKLQDELQKMTDQTVQKIDDLTQKKEQEIM 182


>gi|54310081|ref|YP_131101.1| ribosome recycling factor [Photobacterium profundum SS9]
 gi|60390707|sp|Q6LN27|RRF_PHOPR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|46914520|emb|CAG21299.1| putative ribosome recycling factor [Photobacterium profundum SS9]
          Length = 185

 Score =  160 bits (404), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 121/182 (66%), Gaps = 1/182 (0%)

Query: 6   DLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++QN  ++RMG ++  LK  ++ +RTGR  PS+LD + VE YG++ PL Q+ANV   + R
Sbjct: 4   EIQNDAQERMGKSVDALKNQLVKIRTGRAHPSLLDTIYVEYYGANTPLKQLANVVAEDSR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L ++V+D+E+   +E+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE+
Sbjct: 64  TLAITVFDRELTPKIEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRKEAEQ 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++++RNIRRD    LK   K  + SED     +++IQK+TD  +KNI++  E K+KE+M
Sbjct: 124 GRVAIRNIRRDANADLKALLKDKEISEDDDRRAQDEIQKLTDVAVKNIEAVLEVKEKELM 183

Query: 185 HF 186
             
Sbjct: 184 EV 185


>gi|322372351|ref|ZP_08046887.1| ribosome recycling factor [Streptococcus sp. C150]
 gi|321277393|gb|EFX54462.1| ribosome recycling factor [Streptococcus sp. C150]
          Length = 185

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 116/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD + VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFAHSHESLAREFGSIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKGSIADIERAINESDLGINPANDGSVVRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K  + +ED +  LE DIQK TD  +K IDS   EK+KE++
Sbjct: 126 IAIRNIRRDAMDEAKKQEKDKEITEDQLKGLEKDIQKATDDAVKKIDSMTAEKEKELL 183


>gi|229092864|ref|ZP_04223998.1| Ribosome-recycling factor [Bacillus cereus Rock3-42]
 gi|228690486|gb|EEL44269.1| Ribosome-recycling factor [Bacillus cereus Rock3-42]
          Length = 185

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+KEIM 
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIME 184


>gi|170017339|ref|YP_001728258.1| ribosome recycling factor [Leuconostoc citreum KM20]
 gi|190360251|sp|B1MZ62|RRF_LEUCK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169804196|gb|ACA82814.1| Ribosome recycling factor [Leuconostoc citreum KM20]
          Length = 181

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/181 (44%), Positives = 122/181 (67%), Gaps = 3/181 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
             DL + K RM      L++++ ++RTGR +P +LD ++VE YG+  PLNQVA+++V E 
Sbjct: 2   AFDLTDAKSRMQGAQDALQRELTSIRTGRANPHILDRIEVEYYGAMTPLNQVASISVPEA 61

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R+L+++ +DK  +  + R I+ S+LGLNP  +G ++R+ +P+ TEE R  L K   A AE
Sbjct: 62  RVLLITPFDKTALEEIIRAINMSDLGLNPSSDGNIVRLMIPQMTEEGRKDLAKQVKAEAE 121

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K+K+SVRN+RRD MD +KK +   +  ED V   ENDIQK+TD+ IK ID    EK+KE+
Sbjct: 122 KAKVSVRNVRRDAMDSVKKEK---EMPEDDVRKAENDIQKLTDNNIKAIDDIASEKEKEL 178

Query: 184 M 184
           +
Sbjct: 179 L 179


>gi|49478397|ref|YP_037885.1| ribosome recycling factor [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52141664|ref|YP_085165.1| ribosome recycling factor [Bacillus cereus E33L]
 gi|118479046|ref|YP_896197.1| ribosome recycling factor [Bacillus thuringiensis str. Al Hakam]
 gi|165872626|ref|ZP_02217257.1| ribosome recycling factor [Bacillus anthracis str. A0488]
 gi|167635820|ref|ZP_02394129.1| ribosome recycling factor [Bacillus anthracis str. A0442]
 gi|167639854|ref|ZP_02398123.1| ribosome recycling factor [Bacillus anthracis str. A0193]
 gi|170687902|ref|ZP_02879116.1| ribosome recycling factor [Bacillus anthracis str. A0465]
 gi|177652096|ref|ZP_02934642.1| ribosome recycling factor [Bacillus anthracis str. A0174]
 gi|190568475|ref|ZP_03021382.1| ribosome recycling factor [Bacillus anthracis Tsiankovskii-I]
 gi|196036913|ref|ZP_03104297.1| ribosome recycling factor [Bacillus cereus W]
 gi|196042138|ref|ZP_03109421.1| ribosome recycling factor [Bacillus cereus NVH0597-99]
 gi|196044581|ref|ZP_03111816.1| ribosome recycling factor [Bacillus cereus 03BB108]
 gi|218904952|ref|YP_002452786.1| ribosome recycling factor [Bacillus cereus AH820]
 gi|225865805|ref|YP_002751183.1| ribosome recycling factor [Bacillus cereus 03BB102]
 gi|227813268|ref|YP_002813277.1| ribosome recycling factor [Bacillus anthracis str. CDC 684]
 gi|228916461|ref|ZP_04080027.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228928872|ref|ZP_04091904.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935138|ref|ZP_04097965.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228947543|ref|ZP_04109833.1| Ribosome-recycling factor [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123337|ref|ZP_04252541.1| Ribosome-recycling factor [Bacillus cereus 95/8201]
 gi|229162760|ref|ZP_04290717.1| Ribosome-recycling factor [Bacillus cereus R309803]
 gi|229186063|ref|ZP_04313233.1| Ribosome-recycling factor [Bacillus cereus BGSC 6E1]
 gi|254683469|ref|ZP_05147329.1| ribosome recycling factor [Bacillus anthracis str. CNEVA-9066]
 gi|254721990|ref|ZP_05183779.1| ribosome recycling factor [Bacillus anthracis str. A1055]
 gi|254735862|ref|ZP_05193568.1| ribosome recycling factor [Bacillus anthracis str. Western North
           America USA6153]
 gi|254739612|ref|ZP_05197306.1| ribosome recycling factor [Bacillus anthracis str. Kruger B]
 gi|254756015|ref|ZP_05208046.1| ribosome recycling factor [Bacillus anthracis str. Vollum]
 gi|254759324|ref|ZP_05211349.1| ribosome recycling factor [Bacillus anthracis str. Australia 94]
 gi|301055314|ref|YP_003793525.1| ribosome releasing factor [Bacillus anthracis CI]
 gi|60390240|sp|Q636K2|RRF_BACCZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390255|sp|Q6HEZ1|RRF_BACHK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230411|sp|A0RHJ7|RRF_BACAH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703251|sp|B7JJA2|RRF_BACC0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809490|sp|C3L7A3|RRF_BACAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809491|sp|C1EP48|RRF_BACC3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|49329953|gb|AAT60599.1| ribosome recycling factor [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|51975133|gb|AAU16683.1| ribosome recycling factor [Bacillus cereus E33L]
 gi|118418271|gb|ABK86690.1| ribosome recycling factor [Bacillus thuringiensis str. Al Hakam]
 gi|164711658|gb|EDR17204.1| ribosome recycling factor [Bacillus anthracis str. A0488]
 gi|167512255|gb|EDR87632.1| ribosome recycling factor [Bacillus anthracis str. A0193]
 gi|167528777|gb|EDR91535.1| ribosome recycling factor [Bacillus anthracis str. A0442]
 gi|170668218|gb|EDT18967.1| ribosome recycling factor [Bacillus anthracis str. A0465]
 gi|172082465|gb|EDT67530.1| ribosome recycling factor [Bacillus anthracis str. A0174]
 gi|190560479|gb|EDV14457.1| ribosome recycling factor [Bacillus anthracis Tsiankovskii-I]
 gi|195990468|gb|EDX54452.1| ribosome recycling factor [Bacillus cereus W]
 gi|196024616|gb|EDX63288.1| ribosome recycling factor [Bacillus cereus 03BB108]
 gi|196026990|gb|EDX65614.1| ribosome recycling factor [Bacillus cereus NVH0597-99]
 gi|218535243|gb|ACK87641.1| ribosome recycling factor [Bacillus cereus AH820]
 gi|225788805|gb|ACO29022.1| ribosome recycling factor [Bacillus cereus 03BB102]
 gi|227004475|gb|ACP14218.1| ribosome recycling factor [Bacillus anthracis str. CDC 684]
 gi|228597482|gb|EEK55132.1| Ribosome-recycling factor [Bacillus cereus BGSC 6E1]
 gi|228620642|gb|EEK77511.1| Ribosome-recycling factor [Bacillus cereus R309803]
 gi|228660113|gb|EEL15749.1| Ribosome-recycling factor [Bacillus cereus 95/8201]
 gi|228812063|gb|EEM58394.1| Ribosome-recycling factor [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228824503|gb|EEM70308.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830679|gb|EEM76284.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228843040|gb|EEM88122.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|300377483|gb|ADK06387.1| ribosome releasing factor [Bacillus cereus biovar anthracis str.
           CI]
          Length = 185

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+KEIM 
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIME 184


>gi|46198814|ref|YP_004481.1| ribosome recycling factor (rrf) [Thermus thermophilus HB27]
 gi|55980827|ref|YP_144124.1| ribosome recycling factor [Thermus thermophilus HB8]
 gi|6831652|sp|Q9WX76|RRF_THET8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390719|sp|Q72KE0|RRF_THET2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|11513707|pdb|1EH1|A Chain A, Ribosome Recycling Factor From Thermus Thermophilus
 gi|157836509|pdb|2V46|Y Chain Y, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 1 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 1.
 gi|157836565|pdb|2V48|Y Chain Y, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 3 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 2.
 gi|158429965|pdb|2QBE|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 50s Subunit Of The
           First 70s Ribosome, With Rrf Bound. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|158430018|pdb|2QBG|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 50s Subunit Of The
           Second 70s Ribosome, With Rrf Bound. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|158430071|pdb|2QBI|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 50s
           Subunit Of The First 70s Ribosome, With Gentamicin And
           Rrf Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158430124|pdb|2QBK|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 50s
           Subunit Of The Second 70s Ribosome, With Gentamicin And
           Rrf Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158431424|pdb|2Z4L|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           50s Subunit Of The First 70s Ribosome, With Paromomycin
           And Rrf Bound. The Entire Crystal Structure Contains Two
           70s Ribosomes And Is Described In Remark 400.
 gi|158431477|pdb|2Z4N|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           50s Subunit Of The Second 70s Ribosome, With Paromomycin
           And Rrf Bound. The Entire Crystal Structure Contains Two
           70s Ribosomes And Is Described In Remark 400.
 gi|4589668|dbj|BAA76865.1| frr [Thermus thermophilus]
 gi|46196437|gb|AAS80854.1| ribosome recycling factor (rrf) [Thermus thermophilus HB27]
 gi|55772240|dbj|BAD70681.1| ribosome recycling factor (Rrf) [Thermus thermophilus HB8]
          Length = 185

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 113/174 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +  M  ++  L+ ++  LRTGR +P++L  +KVE YG+HVPLNQ+A VT  +PR LVV  
Sbjct: 11  RSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLVVQS 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD+  + ++E+ I +S+LGLNP  +G  L I +P  TEERR  LV+    YAE+ ++++R
Sbjct: 71  WDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRVAIR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRR+ +D LKK  K    SED     E +IQKITD  I   D   E+K++EI+
Sbjct: 131 NIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLAEKKEQEIL 184


>gi|259046749|ref|ZP_05737150.1| ribosome recycling factor [Granulicatella adiacens ATCC 49175]
 gi|259036645|gb|EEW37900.1| ribosome recycling factor [Granulicatella adiacens ATCC 49175]
          Length = 186

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K+RM  +   L++++ ++R GR + S+LD ++VE YG+  P+NQ+A++TV E RML
Sbjct: 7   LAHTKERMKKSEDALQRELGSIRAGRANASLLDRLEVEYYGALTPVNQLASITVPEARML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +ER I  S++G+ P  +G V+R+ +P+ TEERR  L K     AE +K
Sbjct: 67  LITPYDKSSLNDIERAILMSDIGITPTSDGSVIRLIIPQLTEERRKELAKQVGKEAENAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRRD +D  KK+ K+ + +ED + +LE DIQK+TD ++KNID     K+KE++  
Sbjct: 127 VSVRNIRRDAIDQAKKAEKAKEITEDELHTLEKDIQKVTDDSVKNIDKLAATKEKELLEV 186


>gi|125973518|ref|YP_001037428.1| ribosome recycling factor [Clostridium thermocellum ATCC 27405]
 gi|190360240|sp|A3DE56|RRF_CLOTH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|125713743|gb|ABN52235.1| ribosome recycling factor [Clostridium thermocellum ATCC 27405]
          Length = 183

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 123/180 (68%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           + +NI+++M  T+S LK ++ T+R GR + ++LD + V+ YG   P+NQ+  ++V EPR+
Sbjct: 3   EYKNIEEKMKKTVSVLKDELNTVRAGRANAAILDRITVDYYGVPTPINQLGTISVPEPRV 62

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+  WD +++  +E+ I +S++G+NP  +G+V+R+  P  TEERR  L K+A  Y E +
Sbjct: 63  IVIQPWDAQILKEIEKEIQKSDIGINPNNDGKVIRLVFPPLTEERRKELTKLAKKYGEDA 122

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++R+IRRDG++  K  +K+G+ +ED + S E DIQ +TD  I  ID   E K+KEI+ 
Sbjct: 123 KVAIRSIRRDGIEKKKAMKKNGEITEDDLKSAEKDIQNLTDKYIAEIDKLIEIKEKEILE 182


>gi|56478854|ref|YP_160443.1| ribosome recycling factor [Aromatoleum aromaticum EbN1]
 gi|60390230|sp|Q5NZH2|RRF_AZOSE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56314897|emb|CAI09542.1| ribosome recycling factor [Aromatoleum aromaticum EbN1]
          Length = 185

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I  LK D+  +RTGR    +LD V VE YGS VP++QV+NVT+++ R + V VW+
Sbjct: 12  KMQKSIDVLKADLAKVRTGRAHTGLLDHVMVEYYGSMVPISQVSNVTLIDARTIGVQVWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+  VER I +S+LGLNP  +G ++R+P+P  TEERR  L KV     E +K+++RN+
Sbjct: 72  KPMMQKVERAIRDSDLGLNPANQGDIIRVPMPALTEERRRDLTKVVRHEGEAAKVAIRNL 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD   HLK + K    SED     + DIQK+TD  I  ID    +K++E+M  
Sbjct: 132 RRDANQHLKDAVKDKTISEDDDRRAQEDIQKLTDRNIAEIDKLLAQKEQELMQL 185


>gi|226940990|ref|YP_002796064.1| ribosome recycling factor [Laribacter hongkongensis HLHK9]
 gi|254809516|sp|C1D9F3|RRF_LARHH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226715917|gb|ACO75055.1| Frr [Laribacter hongkongensis HLHK9]
          Length = 185

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/172 (44%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  TI   K  +  +RTGR    +LD + V+ YGS  P+NQVANVT+++ R + V VW+
Sbjct: 12  KMQKTIEAFKHTLAKVRTGRAHAGLLDHITVDYYGSDTPINQVANVTLIDARTIGVQVWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M A VE+ I +S+LGLNP+  G+V+R+P+P  TEERR  L KV    AE ++++VRN+
Sbjct: 72  KNMAAKVEKAIRDSDLGLNPMSMGEVIRVPMPALTEERRRDLTKVVKGEAEDARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + LK   K    +ED     ++DIQK+TD  +  +D  F EK+KE+M
Sbjct: 132 RRDANNDLKTLLKDKDITEDEERRAQDDIQKLTDKYVAEVDKLFAEKEKELM 183


>gi|311030097|ref|ZP_07708187.1| ribosome recycling factor [Bacillus sp. m3-13]
          Length = 185

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/184 (44%), Positives = 121/184 (65%), Gaps = 2/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQVI     KDRM   +    +++ T+R GR S ++LD V V+ YG+  P+NQ+A++ V 
Sbjct: 3   NQVI--TQTKDRMEKAVQAYSRELATIRAGRASAALLDKVTVDYYGAPTPVNQLASLNVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+LVV  +DK  +  +E+ I +++LGLNP  +G V+RI +P  TEERR  LVK     
Sbjct: 61  EARLLVVQPYDKTSLGDIEKAIIKADLGLNPSNDGTVIRISIPALTEERRKELVKQIKKI 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +E++K+ +RNIRRDG D LKK  K+G+ +ED +    +DIQK TD+ I  +D+  +EK+K
Sbjct: 121 SEEAKVGIRNIRRDGNDDLKKLEKNGEITEDELRGYTDDIQKQTDAFIAKVDTVTKEKEK 180

Query: 182 EIMH 185
           EIM 
Sbjct: 181 EIME 184


>gi|261822596|ref|YP_003260702.1| ribosome recycling factor [Pectobacterium wasabiae WPP163]
 gi|261606609|gb|ACX89095.1| ribosome recycling factor [Pectobacterium wasabiae WPP163]
          Length = 185

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/174 (45%), Positives = 110/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD ++VE YGS  PL Q+ANV V + R L +SV+D
Sbjct: 12  RMDKCVEAFKNQINRIRTGRASPSILDGIQVEYYGSATPLRQLANVVVEDSRTLAISVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +ISVRN+
Sbjct: 72  RSLGPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRISVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D  K   K    SED     ++D+QK+TD+ IK +D    EK+ E+M F
Sbjct: 132 RRDANDKFKALLKDKAISEDEERRAQDDVQKLTDNFIKKVDVALAEKEAELMEF 185


>gi|90413532|ref|ZP_01221523.1| ribosome releasing factor [Photobacterium profundum 3TCK]
 gi|90325464|gb|EAS41947.1| ribosome releasing factor [Photobacterium profundum 3TCK]
          Length = 185

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 121/182 (66%), Gaps = 1/182 (0%)

Query: 6   DLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++QN  ++RMG ++  LK  ++ +RTGR  PS+LD + VE YG++ PL Q+ANV   + R
Sbjct: 4   EIQNDAQERMGKSVDALKNQLVKIRTGRAHPSLLDTIYVEYYGANTPLKQLANVVAEDSR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L ++V+D+E+   +E+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE+
Sbjct: 64  TLAITVFDRELTPKIEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRKEAEQ 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++++RNIRRD    LK   K  + SED     +++IQK+TD  +KNI++  E K+KE+M
Sbjct: 124 GRVAIRNIRRDANADLKALLKDKEISEDDDRRAQDEIQKLTDIAVKNIEAVLEVKEKELM 183

Query: 185 HF 186
             
Sbjct: 184 EV 185


>gi|37524676|ref|NP_928020.1| ribosome releasing factor [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|39932036|sp|Q7N8P4|RRF_PHOLL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|36784101|emb|CAE12970.1| ribosome releasing factor [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 185

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + VE YG+  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSVEALKNQISKVRTGRASPSLLDGIIVEYYGAPTPLRQLANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  ++E+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV  + AE+ ++
Sbjct: 67  ITVFDRTMTPAIEKAIMASDLGLNPSSAGTTIRVPLPPLTEERRKDLIKVVRSEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD  D +K   K  + SED     ++DIQK+TD+ IK +D    +K++E+M F
Sbjct: 127 SVRNIRRDANDKIKALLKDKEISEDDERRAQDDIQKLTDNFIKKVDEALTKKEEELMEF 185


>gi|75764985|ref|ZP_00744310.1| Ribosome Recycling Factor (RRF) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218898977|ref|YP_002447388.1| ribosome recycling factor [Bacillus cereus G9842]
 gi|228902327|ref|ZP_04066484.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 4222]
 gi|228909648|ref|ZP_04073471.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 200]
 gi|228940912|ref|ZP_04103471.1| Ribosome-recycling factor [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973841|ref|ZP_04134417.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980430|ref|ZP_04140740.1| Ribosome-recycling factor [Bacillus thuringiensis Bt407]
 gi|229031454|ref|ZP_04187454.1| Ribosome-recycling factor [Bacillus cereus AH1271]
 gi|229098293|ref|ZP_04229240.1| Ribosome-recycling factor [Bacillus cereus Rock3-29]
 gi|229104386|ref|ZP_04235055.1| Ribosome-recycling factor [Bacillus cereus Rock3-28]
 gi|229117310|ref|ZP_04246688.1| Ribosome-recycling factor [Bacillus cereus Rock1-3]
 gi|226703252|sp|B7IUI3|RRF_BACC2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|74487527|gb|EAO51418.1| Ribosome Recycling Factor (RRF) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218541328|gb|ACK93722.1| ribosome recycling factor [Bacillus cereus G9842]
 gi|228666210|gb|EEL21674.1| Ribosome-recycling factor [Bacillus cereus Rock1-3]
 gi|228679084|gb|EEL33292.1| Ribosome-recycling factor [Bacillus cereus Rock3-28]
 gi|228685191|gb|EEL39122.1| Ribosome-recycling factor [Bacillus cereus Rock3-29]
 gi|228729743|gb|EEL80723.1| Ribosome-recycling factor [Bacillus cereus AH1271]
 gi|228779250|gb|EEM27507.1| Ribosome-recycling factor [Bacillus thuringiensis Bt407]
 gi|228785866|gb|EEM33869.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818748|gb|EEM64814.1| Ribosome-recycling factor [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228849937|gb|EEM94768.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 200]
 gi|228857296|gb|EEN01799.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 4222]
 gi|326941592|gb|AEA17488.1| ribosome recycling factor [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 185

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRASSSVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+KEIM 
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIME 184


>gi|89098609|ref|ZP_01171491.1| ribosome recycling factor [Bacillus sp. NRRL B-14911]
 gi|89086571|gb|EAR65690.1| ribosome recycling factor [Bacillus sp. NRRL B-14911]
          Length = 185

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N K+RM   I    +++ ++R GR S S+LD + V+ YG+  P+NQ+A ++V E R+L
Sbjct: 6   ISNSKERMTKAIQAYSRELASIRAGRASASLLDRITVDYYGAPTPVNQLAGISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E+ I +S+LGLNP  +G +LR+ +P  TEERR  LVKV    +E +K
Sbjct: 66  VIQPYDKSILGEIEKAIIKSDLGLNPTNDGNLLRLAIPALTEERRKELVKVVKKESEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D LKK  K+G+ +ED +    +DIQK+TD  I  +DS  ++K+KEI+  
Sbjct: 126 VAIRNIRRDANDDLKKLEKNGEITEDDLRGYSDDIQKMTDEHITKVDSITKDKEKEILEV 185


>gi|117619336|ref|YP_855717.1| ribosome recycling factor [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166230407|sp|A0KHG6|RRF_AERHH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|117560743|gb|ABK37691.1| ribosome recycling factor [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 185

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 113/178 (63%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + KDRM  ++  LK  M  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L +
Sbjct: 8   DAKDRMAKSVESLKTQMSKIRTGRAHPSLLDGIQVEYYGAATPLKQLANVVAEDARTLSI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S++D+ M+ +VE+ I  S+LGLNP   GQ LR+P+P  TEERR  L K+  A AE ++++
Sbjct: 68  SIFDRSMIQAVEKAILTSDLGLNPSSNGQTLRVPLPPLTEERRRDLTKIVRAEAEGARVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIRRD    LK   K  + SED     + +IQK+TDS IK +D     K+KE+M  
Sbjct: 128 VRNIRRDANADLKALLKDKEISEDDDRRAQEEIQKLTDSFIKLVDEALALKEKELMEI 185


>gi|172040501|ref|YP_001800215.1| ribosome recycling factor [Corynebacterium urealyticum DSM 7109]
 gi|238057837|sp|B1VG92|RRF_CORU7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|171851805|emb|CAQ04781.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 185

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM  ++ F ++D+ T+RTGR +P+M + V  E YG   P+ Q+A ++V E RM+
Sbjct: 6   LLECEERMTSSVEFAREDLTTIRTGRANPAMFNSVIAEYYGVPTPITQMATISVPEARMM 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +++  +  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +V+ A +  E +K
Sbjct: 66  LIKPYEQSQIQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRREMVRQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RNIRR GM+ L K +K G A ED V + EN+++KIT + +K +D   E K++E+M 
Sbjct: 126 IAIRNIRRHGMEQLAKIQKDGDAGEDEVRASENELEKITSNYVKQVDELVERKEEELME 184


>gi|152999980|ref|YP_001365661.1| ribosome recycling factor [Shewanella baltica OS185]
 gi|160874601|ref|YP_001553917.1| ribosome recycling factor [Shewanella baltica OS195]
 gi|166231225|sp|A6WLA9|RRF_SHEB8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044074|sp|A9KUK8|RRF_SHEB9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151364598|gb|ABS07598.1| ribosome recycling factor [Shewanella baltica OS185]
 gi|160860123|gb|ABX48657.1| ribosome recycling factor [Shewanella baltica OS195]
 gi|315266842|gb|ADT93695.1| ribosome recycling factor [Shewanella baltica OS678]
          Length = 185

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/183 (43%), Positives = 114/183 (62%), Gaps = 4/183 (2%)

Query: 7   LQNIK----DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           ++NIK    +RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV V +
Sbjct: 2   IENIKKDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVED 61

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R L V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV    A
Sbjct: 62  SRTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRNEA 121

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E  +I++RN+RRD +  +KK  K+   +ED V   E ++QK TD+ IK +D     K+ E
Sbjct: 122 ENGRIAIRNVRRDAISEVKKLEKAKACTEDDVRRSEEEVQKFTDAHIKKVDEILAAKEIE 181

Query: 183 IMH 185
           +M 
Sbjct: 182 LME 184


>gi|309782134|ref|ZP_07676864.1| ribosome recycling factor [Ralstonia sp. 5_7_47FAA]
 gi|308919200|gb|EFP64867.1| ribosome recycling factor [Ralstonia sp. 5_7_47FAA]
          Length = 186

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/177 (45%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I  LK D+  +RTGR    +LD V+V+ YGS VP++QVANVT+++ R + 
Sbjct: 8   KNAEQKMQKSIEALKTDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANVTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I E++LGLNP   G ++R+P P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKKMVQAVEKAIREADLGLNPATMGDIIRVPTPALTEERRKELTKVVKGEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + LKK  K    SED      +DIQK+TD  +  ID    EK KEIM
Sbjct: 128 AVRNLRRDANEQLKKLVKDKAISEDDERRGGDDIQKLTDKFVAEIDKLVAEKDKEIM 184


>gi|241662946|ref|YP_002981306.1| ribosome recycling factor [Ralstonia pickettii 12D]
 gi|240864973|gb|ACS62634.1| ribosome recycling factor [Ralstonia pickettii 12D]
          Length = 186

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/177 (45%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I  LK D+  +RTGR    +LD V+V+ YGS VP++QVANVT+++ R + 
Sbjct: 8   KNAEQKMQKSIDALKTDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANVTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I E++LGLNP   G ++R+P P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKKMVQAVEKAIREADLGLNPATMGDIIRVPTPALTEERRKELTKVVKGEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + LKK  K    SED      +DIQK+TD  +  ID    EK KEIM
Sbjct: 128 AVRNLRRDANEQLKKLVKDKAISEDDERRGGDDIQKLTDKFVAEIDKLVAEKDKEIM 184


>gi|227114690|ref|ZP_03828346.1| ribosome recycling factor [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 185

 Score =  159 bits (402), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 110/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD ++VE YGS  PL Q+AN+ V + R L +SV+D
Sbjct: 12  RMDKCVEAFKNQINRIRTGRASPSILDGIQVEYYGSATPLRQLANIVVEDSRTLAISVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +ISVRN+
Sbjct: 72  RSLGPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRISVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D  K   K    SED     ++D+QK+TD+ IK +D    EK+ E+M F
Sbjct: 132 RRDANDKFKALLKDKAISEDEERRAQDDVQKLTDNFIKKVDVALAEKEAELMEF 185


>gi|283851250|ref|ZP_06368533.1| ribosome recycling factor [Desulfovibrio sp. FW1012B]
 gi|283573419|gb|EFC21396.1| ribosome recycling factor [Desulfovibrio sp. FW1012B]
          Length = 184

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +DRM   +S L K+   LRTGR + S+LD V+VE YGS  PL Q+A+V+  + R +
Sbjct: 5   LTEAEDRMKKALSVLDKEFARLRTGRATTSLLDGVRVEYYGSVTPLEQIASVSTPDSRTI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++    VER I +S+LGL P+ +G+++RI +P  TE+RR  L KVA  YAE++K
Sbjct: 65  TIQPWDRKAFNDVERAILKSDLGLTPVNDGKIIRISIPPLTEDRRKDLAKVAKKYAEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRD  + LKK +     SED     + D+QK+TD  I   D  F +K+KEIM  
Sbjct: 125 VAIRNVRRDANEALKKKKNDKAISEDDQHKGQEDVQKLTDGYIAKTDEAFSKKEKEIMEI 184


>gi|163791595|ref|ZP_02185996.1| ribosome recycling factor [Carnobacterium sp. AT7]
 gi|159873144|gb|EDP67247.1| ribosome recycling factor [Carnobacterium sp. AT7]
          Length = 185

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 124/178 (69%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ   ++M  T S L++++ T+R GR +  +LD + V  YG+  PL Q+A ++V EPR+L
Sbjct: 6   LQTTNEKMVKTESALQRELGTIRAGRANAGLLDRINVVYYGAPTPLKQLAQISVPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  ++ +E+ I +S+LG++P  +G V+R+ +P+ TEERR  L K     AE +K
Sbjct: 66  MITPFDKTSISDIEKSIMQSDLGISPANDGNVIRLVIPQLTEERRKELAKKVGKEAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRNIRR+ MD LKK+ K+ + ++D + + E DIQKIT+ ++KNID+   EK+KE++
Sbjct: 126 VSVRNIRREAMDELKKAEKNNEITQDDLRTFEEDIQKITNESVKNIDAIAAEKEKELL 183


>gi|290473660|ref|YP_003466532.1| ribosome releasing factor [Xenorhabdus bovienii SS-2004]
 gi|289172965|emb|CBJ79736.1| ribosome releasing factor [Xenorhabdus bovienii SS-2004]
          Length = 205

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + V+ YGS  PL Q+A+V   + R L 
Sbjct: 27  KDAQDRMEKSVEALKNQISKIRTGRASPSLLDGISVDYYGSATPLRQIASVVAEDARTLA 86

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  ++E+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 87  ITVFDRSMTPAIEKAIMASDLGLNPSSAGTIIRVPLPALTEERRKDLIKVVRGDAEQGRV 146

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD  D +K   K  + SED     +++IQK+TDS IK ID     K+ E+M F
Sbjct: 147 SVRNIRRDANDKVKALLKDKEISEDEERRSQDEIQKLTDSFIKKIDEALASKETELMDF 205


>gi|308048672|ref|YP_003912238.1| ribosome recycling factor [Ferrimonas balearica DSM 9799]
 gi|307630862|gb|ADN75164.1| ribosome recycling factor [Ferrimonas balearica DSM 9799]
          Length = 185

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/179 (45%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ KDRM  ++   +  M  +RTGR  PS+LD + V  YG   PL QV NVT  + R L 
Sbjct: 7   KDAKDRMVKSVEATQTQMSKVRTGRAHPSLLDSIMVSYYGVDTPLKQVGNVTTEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+DK M+ +VE+ I  S+LGLNP   G ++RIP+P  TEERR  LVKV  A AE  ++
Sbjct: 67  VTVFDKSMIQAVEKAIMASDLGLNPNSAGTMIRIPLPPLTEERRRDLVKVVRAEAEHGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    +K   K  + SED     E+DIQK+TD  +K ID+   +K+KE+M  
Sbjct: 127 AVRNIRRDANSDIKALEKEKEISEDDARRGEDDIQKLTDQYVKQIDAILADKEKELMEV 185


>gi|42782915|ref|NP_980162.1| ribosome recycling factor [Bacillus cereus ATCC 10987]
 gi|206978510|ref|ZP_03239367.1| ribosome recycling factor [Bacillus cereus H3081.97]
 gi|217961244|ref|YP_002339812.1| ribosome recycling factor [Bacillus cereus AH187]
 gi|229140465|ref|ZP_04269020.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST26]
 gi|229197934|ref|ZP_04324650.1| Ribosome-recycling factor [Bacillus cereus m1293]
 gi|60390260|sp|Q732P5|RRF_BACC1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703254|sp|B7HLF7|RRF_BACC7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|42738842|gb|AAS42770.1| ribosome recycling factor [Bacillus cereus ATCC 10987]
 gi|206743279|gb|EDZ54729.1| ribosome recycling factor [Bacillus cereus H3081.97]
 gi|217063331|gb|ACJ77581.1| ribosome recycling factor [Bacillus cereus AH187]
 gi|228585652|gb|EEK43754.1| Ribosome-recycling factor [Bacillus cereus m1293]
 gi|228643026|gb|EEK99302.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST26]
 gi|324327721|gb|ADY22981.1| ribosome recycling factor [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 185

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR + S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSANEKMEKAVAAYSRELATVRAGRANASVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+KEIM 
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIME 184


>gi|148380389|ref|YP_001254930.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 3502]
 gi|153933414|ref|YP_001384607.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 19397]
 gi|153934708|ref|YP_001388123.1| ribosome recycling factor [Clostridium botulinum A str. Hall]
 gi|166230778|sp|A7FPZ5|RRF_CLOB1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230779|sp|A5I4K9|RRF_CLOBH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|148289873|emb|CAL83981.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 3502]
 gi|152929458|gb|ABS34958.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 19397]
 gi|152930622|gb|ABS36121.1| ribosome recycling factor [Clostridium botulinum A str. Hall]
          Length = 184

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 120/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG TI  LKK++ +++ GR +P+MLD ++ E YGS  PLNQ+ N++V E R+L
Sbjct: 6   LKKADEKMGKTIVALKKELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  ++++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKGALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK IDS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKDD-VSEDDIKKAEDDIQKKTDKYIKEIDSIISAKEKEILSI 184


>gi|284008517|emb|CBA75037.1| ribosome recycling factor [Arsenophonus nasoniae]
          Length = 185

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR SPS+LD + VE YG+  PL Q+AN+T  + R L 
Sbjct: 7   KDAQERMEKSVEALKSQISKVRTGRASPSLLDGIVVEYYGAATPLRQLANITAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +  +VE+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  ITVFDRTLTPAVEKAIMASDLGLNPSSAGTIIRVPLPPLTEERRKDLIKVVRNDAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN RRD  D +K   K  + SED     +++IQK+TD+ IK +D   E+K+KE+M F
Sbjct: 127 SVRNARRDANDKIKALLKDKEISEDDERRAQDEIQKLTDNFIKKVDEALEQKEKELMEF 185


>gi|260583805|ref|ZP_05851553.1| ribosome recycling factor [Granulicatella elegans ATCC 700633]
 gi|260158431|gb|EEW93499.1| ribosome recycling factor [Granulicatella elegans ATCC 700633]
          Length = 186

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N K+RM  T   L++++  +R GR + S+LD ++VE YG   P+NQ+A+VTV E RML
Sbjct: 7   IANAKERMKKTEDALQRELGGIRAGRANASLLDRLQVEYYGVPTPVNQLASVTVPEARML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +ER I  S++G+ P  +G V+R+ +P+ TEERR  L K     AE +K
Sbjct: 67  LITPYDKSSLQDIERAILMSDIGITPTNDGSVVRLVIPQLTEERRKELAKQVGKEAEGAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRRD ++HLKK+ K+ + +ED +   E DIQK+TD ++KNID   + K+KE++  
Sbjct: 127 VSVRNIRRDAIEHLKKAEKNKEITEDDLRGYEKDIQKLTDDSVKNIDHLAQVKEKELLEV 186


>gi|237808853|ref|YP_002893293.1| ribosome recycling factor [Tolumonas auensis DSM 9187]
 gi|259494557|sp|C4L861|RRF_TOLAT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|237501114|gb|ACQ93707.1| ribosome recycling factor [Tolumonas auensis DSM 9187]
          Length = 185

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 112/178 (62%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + KDRM  ++  LK  M  +RTGR  P++LD + VE YGS  PL QVANV   + R L V
Sbjct: 8   DAKDRMTKSVDSLKSHMSKIRTGRAQPALLDGIMVEYYGSATPLRQVANVVAEDSRTLAV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           SV+D+ M+ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  A AE++++S
Sbjct: 68  SVFDRSMIQAVEKAIMTSDLGLNPSSAGTTIRVPLPALTEERRKDLIKLVRAEAEQARVS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRN+RRD    LK   K    SED     + +IQK+TDS +K +D     K+KE+M  
Sbjct: 128 VRNVRRDCNADLKALLKDKDISEDDDRRAQEEIQKLTDSFVKLVDDLLAAKEKELMEI 185


>gi|241890096|ref|ZP_04777394.1| ribosome recycling factor [Gemella haemolysans ATCC 10379]
 gi|241863718|gb|EER68102.1| ribosome recycling factor [Gemella haemolysans ATCC 10379]
          Length = 185

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 120/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N+ +RM   I+ L++++ ++R G+ S ++LD + V+ YG   P+NQVA V+V EP+ML
Sbjct: 6   MNNLNERMEKAIASLRRELASIRAGKASAAVLDRLTVDYYGVPTPINQVAGVSVPEPKML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S ++K ++  +E+ I  S+LGLNP  +G V+RI  P  TEERR  L K+    +E +K
Sbjct: 66  VISPYEKTLLGDIEKAIQASDLGLNPANDGTVIRIVFPALTEERRKELAKLVGKESEGAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD MD +KK  KS + +ED +    +DIQK+TD  +  ID   +EK++E+M 
Sbjct: 126 VAVRNVRRDAMDAMKKLEKSSQITEDDLKGYSDDIQKVTDKFVAEIDKVTKEKQEELMS 184


>gi|229019019|ref|ZP_04175860.1| Ribosome-recycling factor [Bacillus cereus AH1273]
 gi|229025264|ref|ZP_04181684.1| Ribosome-recycling factor [Bacillus cereus AH1272]
 gi|228736017|gb|EEL86592.1| Ribosome-recycling factor [Bacillus cereus AH1272]
 gi|228742259|gb|EEL92418.1| Ribosome-recycling factor [Bacillus cereus AH1273]
          Length = 185

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRASSSVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRDG D LKK  K+G  +ED +     DIQK TD  I  +D   + K+KEIM 
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGDITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIME 184


>gi|297568948|ref|YP_003690292.1| ribosome recycling factor [Desulfurivibrio alkaliphilus AHT2]
 gi|296924863|gb|ADH85673.1| ribosome recycling factor [Desulfurivibrio alkaliphilus AHT2]
          Length = 184

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 125/185 (67%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++VI    + D+M  +I   ++++  +RTGR S S+LD VKVEAYGS +PLNQVA +T+
Sbjct: 1   MDEVI--LEMSDKMEKSIEAYRRELSRIRTGRASLSLLDGVKVEAYGSSMPLNQVATLTI 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+V+  WD + V+++E+ IH S++GL P  +G+V+R+ +P+ TEERR  +VK    
Sbjct: 59  PESRMIVIQPWDAQQVSAIEKAIHASDIGLTPNSDGKVIRLMIPQLTEERRKEMVKQVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E+ +++VRN RR+ +D LKK +   +  ED    L+++ Q+ TD  IK IDS   EK+
Sbjct: 119 ISEEYRVAVRNSRREAIDTLKKLKNDKQLPEDDFFRLQDEAQQETDRFIKQIDSIMAEKE 178

Query: 181 KEIMH 185
           KE+M 
Sbjct: 179 KEMME 183


>gi|256847041|ref|ZP_05552487.1| ribosome recycling factor [Lactobacillus coleohominis 101-4-CHN]
 gi|256715705|gb|EEU30680.1| ribosome recycling factor [Lactobacillus coleohominis 101-4-CHN]
          Length = 186

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 122/178 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N K++M  +   LK+ +  +R GR + S+L+ VKV+ YG+  PLNQ+A++TV E R L
Sbjct: 7   LANAKEKMAKSGEALKRTLADIRAGRANASILNPVKVDYYGALTPLNQMASITVPEARQL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +DK  +  +ER I+E++LGL P  +G+ +RI +P+ TEERR  LVK   A  E +K
Sbjct: 67  LVSPYDKSTLKDIERAIYEADLGLTPQNDGEAIRIMIPQLTEERRKELVKDVKAELENAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RR+ MD LKK  K G  ++D   +LE+ +QK TD+ IKN+++  ++K+ E+M
Sbjct: 127 VAVRNVRREAMDDLKKGNKDGDFNDDEFHNLEDQVQKETDAGIKNLEAIAKDKEDELM 184


>gi|289578399|ref|YP_003477026.1| ribosome recycling factor [Thermoanaerobacter italicus Ab9]
 gi|297544675|ref|YP_003676977.1| ribosome recycling factor [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|289528112|gb|ADD02464.1| ribosome recycling factor [Thermoanaerobacter italicus Ab9]
 gi|296842450|gb|ADH60966.1| ribosome recycling factor [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 184

 Score =  159 bits (401), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/180 (44%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M  ++S LK ++  +R GR +P++LD + V+ YG+  PLN++A +T  E R+L
Sbjct: 5   LKASEEKMQKSLSVLKSELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEARVL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD   ++ +E+ I +S+LG+NP+ +G+VLR+  PE TEERR  LVK+ +  AE++K
Sbjct: 65  VVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVYKKAEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRRD  D +KK  K+G+ SED     E +IQK+TD  IK ID   E K+KEIM  
Sbjct: 125 VAVRQIRRDANDTVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKIAETKEKEIMEI 184


>gi|206889935|ref|YP_002249340.1| ribosome recycling factor [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741873|gb|ACI20930.1| ribosome recycling factor [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 185

 Score =  158 bits (400), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 81/174 (46%), Positives = 122/174 (70%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +   KKD+ T RTGR S  +LD +KVE YGS VPLNQVA + + EPRM+ +  W
Sbjct: 11  EKMNQALEVFKKDLSTFRTGRASLGILDNIKVEYYGSTVPLNQVATLGIPEPRMITIQPW 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +++M++ +ER I +S+LGL PI +G++++I +P  TEERR  LVKV     E++++++RN
Sbjct: 71  EQKMISEIERAIMKSDLGLTPINDGKMIKIVIPPLTEERRKQLVKVVRKRTEEARVAIRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IRRD ++ +KK+ K  K SED    ++ +IQKIT+S I+ ID   E+K+KEIM 
Sbjct: 131 IRRDIIEEIKKAEKEKKLSEDESRRIQEEIQKITNSFIEKIDHALEQKEKEIME 184


>gi|50119974|ref|YP_049141.1| ribosome recycling factor [Pectobacterium atrosepticum SCRI1043]
 gi|60390249|sp|Q6D8E0|RRF_ERWCT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|49610500|emb|CAG73945.1| ribosome recycling factor [Pectobacterium atrosepticum SCRI1043]
          Length = 185

 Score =  158 bits (400), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/174 (45%), Positives = 109/174 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YGS  PL Q+ANV V + R L +SV+D
Sbjct: 12  RMDKCVEAFKNQINRIRTGRASPSILDGIHVEYYGSATPLRQLANVVVEDSRTLAISVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +ISVRN+
Sbjct: 72  RSLSPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRISVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D  K   K    SED     ++D+QK+TD+ IK +D    EK+ E+M F
Sbjct: 132 RRDANDKFKALLKDKAISEDEERRAQDDVQKLTDNFIKKVDVALAEKEAELMEF 185


>gi|157376290|ref|YP_001474890.1| ribosome recycling factor [Shewanella sediminis HAW-EB3]
 gi|189044077|sp|A8FY39|RRF_SHESH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157318664|gb|ABV37762.1| ribosome recycling factor [Shewanella sediminis HAW-EB3]
          Length = 185

 Score =  158 bits (400), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/177 (45%), Positives = 109/177 (61%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + K RM   +   K  M  +RTGR  PS+LD +KV  YGS  PL QV NV++ + R L V
Sbjct: 8   DAKSRMEKCVESTKTQMAKVRTGRAHPSLLDTIKVSYYGSMTPLKQVGNVSIEDSRTLAV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +V+D  M+ +VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KV  A AE  +I+
Sbjct: 68  NVFDSTMIQAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           VRN+RRD    +K   K  + +ED V   E+D+QK TD+ IK ID     K+ E+M 
Sbjct: 128 VRNVRRDANSDVKSLEKEKECTEDDVRRTEDDVQKFTDAHIKLIDEILTAKEAELME 184


>gi|168184638|ref|ZP_02619302.1| ribosome recycling factor [Clostridium botulinum Bf]
 gi|170756757|ref|YP_001781975.1| ribosome recycling factor [Clostridium botulinum B1 str. Okra]
 gi|226949785|ref|YP_002804876.1| ribosome recycling factor [Clostridium botulinum A2 str. Kyoto]
 gi|237795867|ref|YP_002863419.1| ribosome recycling factor [Clostridium botulinum Ba4 str. 657]
 gi|229564223|sp|B1II63|RRF_CLOBK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809503|sp|C1FSK2|RRF_CLOBJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|259494535|sp|C3L0C9|RRF_CLOB6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169121969|gb|ACA45805.1| ribosome recycling factor [Clostridium botulinum B1 str. Okra]
 gi|182672259|gb|EDT84220.1| ribosome recycling factor [Clostridium botulinum Bf]
 gi|226841674|gb|ACO84340.1| ribosome recycling factor [Clostridium botulinum A2 str. Kyoto]
 gi|229263177|gb|ACQ54210.1| ribosome recycling factor [Clostridium botulinum Ba4 str. 657]
 gi|322806698|emb|CBZ04267.1| ribosome recycling factor [Clostridium botulinum H04402 065]
          Length = 184

 Score =  158 bits (400), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 120/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG TI  LK+++ +++ GR +P+MLD ++ E YGS  PLNQ+ N++V E R+L
Sbjct: 6   LKKADEKMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  ++++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK IDS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKDD-VSEDDIKKAEDDIQKKTDKYIKEIDSIISAKEKEILSI 184


>gi|220931612|ref|YP_002508520.1| ribosome recycling factor [Halothermothrix orenii H 168]
 gi|254809515|sp|B8CW56|RRF_HALOH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219992922|gb|ACL69525.1| ribosome recycling factor [Halothermothrix orenii H 168]
          Length = 185

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N K +M   +   K D+ T+RTGR  PS+++ + V+ YG+  P+ Q+A V   E R LV
Sbjct: 7   KNAKQKMEKVLEATKHDLNTVRTGRARPSLVENIMVDYYGTQTPIQQMAKVVAPEARQLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK ++ S+E+ I +SNLGLNP  +G V+RI +P+ TEERR  LVKVAH  AEK +I
Sbjct: 67  IEPWDKSVIESIEKAILKSNLGLNPSNDGNVIRINIPQLTEERRKELVKVAHEKAEKGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRR+  D LK+  K+ + SED      + IQ++TD+ I  ID   E+K+++IM  
Sbjct: 127 AIRNIRREANDELKEMEKNSEISEDNYHRGLDMIQELTDTYIDKIDKMLEDKEQDIMEV 185


>gi|119898197|ref|YP_933410.1| ribosome recycling factor [Azoarcus sp. BH72]
 gi|166230409|sp|A1K6R8|RRF_AZOSB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119670610|emb|CAL94523.1| Frr protein [Azoarcus sp. BH72]
          Length = 185

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 110/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I  LK D+  +RTGR    +LD V VE YGS VP+NQVAN+T+++ R + V  W+
Sbjct: 12  KMQKSIDALKTDLAKIRTGRAHTGLLDHVMVEYYGSMVPINQVANITLIDARTIGVQTWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+  VE+ I + +LGLNP   G+++R+P+P  TEERR  L KV     E +K++VRN+
Sbjct: 72  KPMLGKVEKAIRDCDLGLNPANMGEIIRVPMPALTEERRRDLTKVVRQEGETAKVAVRNL 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD   HLK + K    SED     ++DIQK+TD  +  ID    +K++E+M  
Sbjct: 132 RRDANQHLKDAVKDKTISEDDERRSQDDIQKLTDKYVAEIDKLLAQKEQELMQI 185


>gi|319762178|ref|YP_004126115.1| ribosome recycling factor [Alicycliphilus denitrificans BC]
 gi|330826010|ref|YP_004389313.1| ribosome recycling factor [Alicycliphilus denitrificans K601]
 gi|317116739|gb|ADU99227.1| ribosome recycling factor [Alicycliphilus denitrificans BC]
 gi|329311382|gb|AEB85797.1| ribosome recycling factor [Alicycliphilus denitrificans K601]
          Length = 186

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N+  +M  +I+ LK ++  +RTGR +P++LD + VE YGS VPL+QVANV++L+ R + 
Sbjct: 8   KNLDAKMDQSIAALKNNLSKVRTGRANPALLDSIHVEYYGSMVPLSQVANVSLLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A VE+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E +K+
Sbjct: 68  VQPWEKNMGAKVEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGENAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + +KK  K   ASED     E DIQK TD  I  ID+    K+++I+  
Sbjct: 128 AVRNLRRDANEAVKKLVKEKLASEDEQKRAEADIQKTTDKHIAEIDALVAAKEQDILAI 186


>gi|30021912|ref|NP_833543.1| ribosome recycling factor [Bacillus cereus ATCC 14579]
 gi|47569102|ref|ZP_00239791.1| ribosome recycling factor [Bacillus cereus G9241]
 gi|206972656|ref|ZP_03233597.1| ribosome recycling factor [Bacillus cereus AH1134]
 gi|218234587|ref|YP_002368625.1| ribosome recycling factor [Bacillus cereus B4264]
 gi|228922578|ref|ZP_04085878.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954100|ref|ZP_04116129.1| Ribosome-recycling factor [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228960040|ref|ZP_04121704.1| Ribosome-recycling factor [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228986967|ref|ZP_04147093.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229047510|ref|ZP_04193100.1| Ribosome-recycling factor [Bacillus cereus AH676]
 gi|229071322|ref|ZP_04204545.1| Ribosome-recycling factor [Bacillus cereus F65185]
 gi|229081079|ref|ZP_04213589.1| Ribosome-recycling factor [Bacillus cereus Rock4-2]
 gi|229111295|ref|ZP_04240848.1| Ribosome-recycling factor [Bacillus cereus Rock1-15]
 gi|229129100|ref|ZP_04258073.1| Ribosome-recycling factor [Bacillus cereus BDRD-Cer4]
 gi|229146395|ref|ZP_04274766.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST24]
 gi|229152023|ref|ZP_04280218.1| Ribosome-recycling factor [Bacillus cereus m1550]
 gi|229157400|ref|ZP_04285478.1| Ribosome-recycling factor [Bacillus cereus ATCC 4342]
 gi|229180100|ref|ZP_04307444.1| Ribosome-recycling factor [Bacillus cereus 172560W]
 gi|229191993|ref|ZP_04318963.1| Ribosome-recycling factor [Bacillus cereus ATCC 10876]
 gi|296504319|ref|YP_003666019.1| ribosome recycling factor [Bacillus thuringiensis BMB171]
 gi|33301535|sp|Q812X4|RRF_BACCR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703253|sp|B7HDU7|RRF_BACC4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29897468|gb|AAP10744.1| Ribosome Recycling Factor (RRF) [Bacillus cereus ATCC 14579]
 gi|47554264|gb|EAL12626.1| ribosome recycling factor [Bacillus cereus G9241]
 gi|206732413|gb|EDZ49594.1| ribosome recycling factor [Bacillus cereus AH1134]
 gi|218162544|gb|ACK62536.1| ribosome recycling factor [Bacillus cereus B4264]
 gi|228591544|gb|EEK49393.1| Ribosome-recycling factor [Bacillus cereus ATCC 10876]
 gi|228603309|gb|EEK60786.1| Ribosome-recycling factor [Bacillus cereus 172560W]
 gi|228626127|gb|EEK82876.1| Ribosome-recycling factor [Bacillus cereus ATCC 4342]
 gi|228631372|gb|EEK88006.1| Ribosome-recycling factor [Bacillus cereus m1550]
 gi|228637028|gb|EEK93487.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST24]
 gi|228654337|gb|EEL10202.1| Ribosome-recycling factor [Bacillus cereus BDRD-Cer4]
 gi|228672071|gb|EEL27362.1| Ribosome-recycling factor [Bacillus cereus Rock1-15]
 gi|228702123|gb|EEL54599.1| Ribosome-recycling factor [Bacillus cereus Rock4-2]
 gi|228711776|gb|EEL63728.1| Ribosome-recycling factor [Bacillus cereus F65185]
 gi|228723757|gb|EEL75112.1| Ribosome-recycling factor [Bacillus cereus AH676]
 gi|228772745|gb|EEM21185.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228799556|gb|EEM46509.1| Ribosome-recycling factor [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228805666|gb|EEM52256.1| Ribosome-recycling factor [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228837007|gb|EEM82348.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296325371|gb|ADH08299.1| ribosome recycling factor [Bacillus thuringiensis BMB171]
          Length = 185

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR + S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRANASVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+KEIM 
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIME 184


>gi|307256592|ref|ZP_07538373.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865002|gb|EFM96904.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 185

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 114/176 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +DRM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L V+V
Sbjct: 10  QDRMEKSLEALKSHISKIRTGRAQPSLLDGIQVEYYGSATPLRQLANVVAEDARTLAVNV 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ KI++R
Sbjct: 70  FDRSLISAVEKAILTSDLGLNPSSAGATIRVPLPPLTEERRRDLIKIVKGEGEQGKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRD  D +K   K  + SED     +++IQKITD  +K +D     K+KE+++F
Sbjct: 130 NVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDGYVKKVDEVLAAKEKELLNF 185


>gi|297584070|ref|YP_003699850.1| ribosome recycling factor [Bacillus selenitireducens MLS10]
 gi|297142527|gb|ADH99284.1| ribosome recycling factor [Bacillus selenitireducens MLS10]
          Length = 185

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 120/177 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+N ++RM  ++    +++ ++R GR +PS+LD V+VE YG   PLNQ+A ++V E R+L
Sbjct: 6   LKNAEERMNKSLESFGRELGSVRAGRANPSILDRVQVEYYGMMTPLNQLATISVPEGRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +DK  +  +E+ I +++LGL+P  +G ++RI +P  TEERR  L+KV   YAE +K
Sbjct: 66  VVQPFDKSSLPDIEKAIQKADLGLSPSNDGNIIRISIPALTEERRKELIKVVGRYAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VRN+RRD  D LKK  K G+ +ED +   ++D+QK+TD  IK ID   + K+ +I
Sbjct: 126 VAVRNVRRDANDELKKLEKDGEMTEDELRRGQDDVQKLTDDYIKKIDERVKAKENDI 182


>gi|260775282|ref|ZP_05884179.1| ribosome recycling factor [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608463|gb|EEX34628.1| ribosome recycling factor [Vibrio coralliilyticus ATCC BAA-450]
          Length = 185

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   QDAQERMEKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAIMTSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQKITD+ +K +D     K+KE+M  
Sbjct: 127 AIRNIRRDANGELKALLKDKEISEDEDRKGQDEIQKITDAAVKQVDEVLAAKEKELMEV 185


>gi|239636263|ref|ZP_04677265.1| ribosome recycling factor [Staphylococcus warneri L37603]
 gi|239597618|gb|EEQ80113.1| ribosome recycling factor [Staphylococcus warneri L37603]
 gi|330685682|gb|EGG97323.1| ribosome recycling factor [Staphylococcus epidermidis VCU121]
          Length = 184

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ + RM  +I  L K++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+L
Sbjct: 5   IKDTRARMQKSIDNLSKELANISAGRANSNLLNGVNVDYYGAPTPVQQLASINVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK  VA +E+ I+ +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K
Sbjct: 65  VISPYDKSSVADIEKAINAANLGVNPTSDGEVIRISVPALTEERRKELVKDVKKIGEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD++IK ID   ++K+K+IM  
Sbjct: 125 VSIRNIRRDVNDQLKKDEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVDDKEKDIMSV 184


>gi|32034388|ref|ZP_00134578.1| COG0233: Ribosome recycling factor [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208052|ref|YP_001053277.1| ribosome recycling factor [Actinobacillus pleuropneumoniae L20]
 gi|165975984|ref|YP_001651577.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|190149883|ref|YP_001968408.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|303251563|ref|ZP_07337737.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|303252201|ref|ZP_07338369.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|307245431|ref|ZP_07527519.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307247544|ref|ZP_07529588.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307249778|ref|ZP_07531756.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307252124|ref|ZP_07534023.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307254385|ref|ZP_07536223.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307258844|ref|ZP_07540576.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307261026|ref|ZP_07542708.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307263207|ref|ZP_07544827.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|322514208|ref|ZP_08067270.1| ribosome recycling factor [Actinobacillus ureae ATCC 25976]
 gi|166230406|sp|A3MZT6|RRF_ACTP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238687536|sp|B0BUC8|RRF_ACTPJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238692331|sp|B3GXB4|RRF_ACTP7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|126096844|gb|ABN73672.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|165876085|gb|ABY69133.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|189915014|gb|ACE61266.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|302648984|gb|EFL79172.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|302649561|gb|EFL79743.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306853772|gb|EFM85989.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306855909|gb|EFM88068.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306858193|gb|EFM90271.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306860424|gb|EFM92438.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306862684|gb|EFM94640.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306867195|gb|EFM99051.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306869328|gb|EFN01123.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306871424|gb|EFN03148.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|322119901|gb|EFX91910.1| ribosome recycling factor [Actinobacillus ureae ATCC 25976]
          Length = 185

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L 
Sbjct: 7   KDTQDRMEKSLEALKSHISKIRTGRAQPSLLDGIQVEYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ KI
Sbjct: 67  VNVFDRSLISAVEKAILTSDLGLNPSSAGATIRVPLPPLTEERRRDLIKIVKGEGEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     +++IQKITD  +K +D     K+KE++ F
Sbjct: 127 AIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDGYVKKVDEVLAAKEKELLDF 185


>gi|241764760|ref|ZP_04762769.1| ribosome recycling factor [Acidovorax delafieldii 2AN]
 gi|241365750|gb|EER60422.1| ribosome recycling factor [Acidovorax delafieldii 2AN]
          Length = 186

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 112/172 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I+  K ++  +RTGR +P++LD V VE YGS VPL+QVANV +L+ R + V  W+
Sbjct: 13  KMDQSIAAFKNNLQKIRTGRANPALLDTVHVEYYGSPVPLSQVANVALLDSRTISVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E +KI+VRN+
Sbjct: 73  KGMGAKIEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGESAKIAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + +KK  K   ASED     E D+QK TD  I  ID+    K++EIM
Sbjct: 133 RRDANESVKKLVKDKLASEDDQKRAETDVQKFTDKHIAEIDALVAAKEQEIM 184


>gi|326316576|ref|YP_004234248.1| ribosome recycling factor [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373412|gb|ADX45681.1| ribosome recycling factor [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 186

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 117/177 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I   K ++  +RTGR +P++LD V+VE YGS VPL+QVANV++++ R + 
Sbjct: 8   KNTEAKMDQSIVAFKNNLAKIRTGRANPALLDSVQVEYYGSMVPLSQVANVSLIDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E +K+
Sbjct: 68  VQPWEKGMGAKIEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + +KK  K   ASED     E DIQK+TD  I  +D+    K++EIM
Sbjct: 128 AVRNLRRDANESVKKLVKDKLASEDEQKRAEADIQKVTDKHIAEVDALVAAKEQEIM 184


>gi|323701848|ref|ZP_08113518.1| ribosome recycling factor [Desulfotomaculum nigrificans DSM 574]
 gi|323533152|gb|EGB23021.1| ribosome recycling factor [Desulfotomaculum nigrificans DSM 574]
          Length = 184

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 117/179 (65%), Gaps = 1/179 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N ++ M  T+  ++K+  +LR GR +P++LD V V  YG+  PLNQ+AN++V E R L
Sbjct: 6   IANAEENMKKTVEVVRKEFASLRAGRATPALLDKVVVSYYGTPTPLNQLANISVPEARSL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  +  +ER I +S+LG+ P  +G V+R+ +P+ T+ERR  LVKV    AE+ +
Sbjct: 66  VIQPWDKSALPEIERAILKSDLGITPTSDGTVIRLTIPQLTQERRAELVKVVKKKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRR+ +D +K  +K G   ED V   + D+QKITD  IK ID   + K++EIM 
Sbjct: 126 VAIRNIRREVIDQIKAKQKEG-VPEDEVKRGQEDMQKITDKFIKEIDEMVKSKEQEIMQ 183


>gi|323142320|ref|ZP_08077152.1| ribosome recycling factor [Phascolarctobacterium sp. YIT 12067]
 gi|322413204|gb|EFY04091.1| ribosome recycling factor [Phascolarctobacterium sp. YIT 12067]
          Length = 187

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 124/186 (66%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++I    I+ +M  +++ L+ D+ +LR GR +PS+L+ V V+ YGS  P+ QVA+VTV
Sbjct: 4   VNEII--SGIESKMEKSVAALRVDLASLRAGRATPSLLEKVMVDYYGSPTPVTQVASVTV 61

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+V+  W+K ++  +E+ I +S+LGLNP  +G  +R+ +P+ TEERR  LVKV H 
Sbjct: 62  PEPRMIVIQPWEKNILKDIEKAIMKSDLGLNPNSDGICIRLNLPQLTEERRKDLVKVVHK 121

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++ VRN+RRD  D +KK+ K+ + +ED        +QK+TD  +K ID+    K+
Sbjct: 122 KAEEYRVVVRNLRRDANDAIKKTEKAKEITEDEAKKGTEKVQKLTDKVMKEIDAAAANKE 181

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 182 KEVMEV 187


>gi|302339357|ref|YP_003804563.1| ribosome recycling factor [Spirochaeta smaragdinae DSM 11293]
 gi|301636542|gb|ADK81969.1| ribosome recycling factor [Spirochaeta smaragdinae DSM 11293]
          Length = 184

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 115/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + RM  +IS L  D   LRTGR S ++ D +KV+ YG   PL+Q A ++V E R++
Sbjct: 5   LKDAESRMKKSISALGDDFNGLRTGRASAALFDKIKVDYYGQSTPLSQAATISVPEARLV 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  +ER I +S L +NP  +G+V+RI +P  TEERR  LVKVA   AE+ K
Sbjct: 65  VIQPWDKGLLGEIERAIQKSELSVNPNNDGKVIRINIPPLTEERRKELVKVAKNQAEQCK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD  + LKK +KSG  SED      ++IQK+TD  ++      E K++EIM 
Sbjct: 125 VAIRNIRRDANEELKKIQKSGDISEDEEKRGADEIQKLTDKHVEEAGKLLEAKEQEIME 183


>gi|153940196|ref|YP_001391730.1| ribosome recycling factor [Clostridium botulinum F str. Langeland]
 gi|166230780|sp|A7GG20|RRF_CLOBL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|152936092|gb|ABS41590.1| ribosome recycling factor [Clostridium botulinum F str. Langeland]
 gi|295319756|gb|ADG00134.1| ribosome recycling factor [Clostridium botulinum F str. 230613]
          Length = 184

 Score =  158 bits (399), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 120/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG TI  LK+++ +++ GR +P+MLD ++ E YGS  PLNQ+ N+++ E R+L
Sbjct: 6   LKKADEKMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  ++++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK IDS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKDD-VSEDDIKKAEDDIQKKTDKYIKEIDSIISAKEKEILSI 184


>gi|169350431|ref|ZP_02867369.1| hypothetical protein CLOSPI_01199 [Clostridium spiroforme DSM 1552]
 gi|169292751|gb|EDS74884.1| hypothetical protein CLOSPI_01199 [Clostridium spiroforme DSM 1552]
          Length = 181

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 115/178 (64%), Gaps = 4/178 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    +RMG TI   K+D+ T+RTGR +P+MLD V V  YGS  P+NQ+A ++V+E R L
Sbjct: 6   LDEASERMGKTIDSFKRDLTTVRTGRANPAMLDRVMVNYYGSPTPINQMAGISVVEGRQL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E GI+E+ LGL P  +G+++RI VP  TE+RR    K    +AE +K
Sbjct: 66  VIKPYDKSVIKDIEHGIYEAELGLTPQNDGEIIRIMVPALTEDRRREFAKQVWKFAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD  D +KK       SED + + +  +QK+TD  +K ID   + K+KEIM
Sbjct: 126 VSIRNIRRDSNDEIKKV----DGSEDEIKAGQEKVQKLTDKFVKEIDEIAKVKEKEIM 179


>gi|212639532|ref|YP_002316052.1| ribosome recycling factor [Anoxybacillus flavithermus WK1]
 gi|212561012|gb|ACJ34067.1| Ribosome recycling factor [Anoxybacillus flavithermus WK1]
          Length = 183

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N K++M   +    +++ T+R GR +P++L+ + V+ YG   P+ Q+A + V E R+L
Sbjct: 4   LTNAKEKMDKAVQAFSRELATIRAGRANPALLEKITVDYYGMPTPIIQLAGIQVPEARLL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E+ I  S+LGL P  +G V+RI +P  TEERR  LVK+   YAE++K
Sbjct: 64  VIQPYDKSVLKEIEKAILASDLGLTPSNDGSVIRISIPPLTEERRRELVKLVKKYAEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD  D LKK  K+G+ +ED +     DIQK+TD  I  ID+  +EK+KE+M 
Sbjct: 124 VAVRNIRRDANDELKKLEKNGEITEDELRGYTEDIQKLTDDHIAKIDAITKEKEKEVME 182


>gi|323497979|ref|ZP_08102988.1| ribosome recycling factor [Vibrio sinaloensis DSM 21326]
 gi|323317024|gb|EGA70026.1| ribosome recycling factor [Vibrio sinaloensis DSM 21326]
          Length = 185

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K+RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   QDAKERMDKSVEALKNNLSKVRTGRAHPSLLSGINVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +K +D     K+KE+M  
Sbjct: 127 AIRNIRRDANGELKALLKDKEISEDEDRKGQDEIQKLTDAAVKQVDEVLAAKEKELMEV 185


>gi|282882018|ref|ZP_06290659.1| ribosome recycling factor [Peptoniphilus lacrimalis 315-B]
 gi|300813724|ref|ZP_07094044.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|281298048|gb|EFA90503.1| ribosome recycling factor [Peptoniphilus lacrimalis 315-B]
 gi|300512181|gb|EFK39361.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 185

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 116/170 (68%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
           TIS LK+D  ++R GR + S+LD + V+ YG   P+NQVA ++  EPRML++S WD +++
Sbjct: 16  TISSLKEDFQSIRAGRANTSLLDKITVDYYGQQSPINQVAGLSAPEPRMLMISPWDPKLI 75

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
             +E+ I +S+LG+ P  +G+V+R+ +P+ TEERR  L KV    +E +KI++RNIRRD 
Sbjct: 76  PEIEKSILKSDLGITPSNDGKVIRLIIPQLTEERRKDLTKVVGKNSEAAKIAIRNIRRDA 135

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           MD +KK+ KS + +ED   S E +IQK+TD  I+ ID   + K+ E+M  
Sbjct: 136 MDEIKKAEKSKEITEDDRKSNEEEIQKLTDKYIEEIDKITKAKEIELMEI 185


>gi|254492622|ref|ZP_05105793.1| ribosome recycling factor [Methylophaga thiooxidans DMS010]
 gi|224462143|gb|EEF78421.1| ribosome recycling factor [Methylophaga thiooxydans DMS010]
          Length = 185

 Score =  157 bits (398), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 81/179 (45%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++  DRM  +++ L   M  +R GR   S+LD ++V  YGS VPL+QVANV V + R L 
Sbjct: 7   KDAADRMKKSVAALGTAMAKIRAGRAHTSLLDHLQVPYYGSDVPLSQVANVGVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K+MV+ VE+ I  S+LG+NP+  G  +RIP+P  TEERR  LVKVA   AE +++
Sbjct: 67  VTPWEKDMVSVVEKAIMTSDLGVNPMSAGMTIRIPIPPLTEERRRDLVKVAKGEAENARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     E ++QK+TD+TIK ID    +K+ ++M  
Sbjct: 127 AVRNIRRDANSTLKDLLKEKEISEDEQRGAEEEVQKLTDATIKEIDQVLADKESDLMEV 185


>gi|168180688|ref|ZP_02615352.1| ribosome recycling factor [Clostridium botulinum NCTC 2916]
 gi|182668443|gb|EDT80422.1| ribosome recycling factor [Clostridium botulinum NCTC 2916]
          Length = 184

 Score =  157 bits (398), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 120/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG TI  LK+++ +++ GR +P+MLD ++ E YGS  PLNQ+ N++V E R+L
Sbjct: 6   LKKADEKMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  ++++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKGALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK IDS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKDD-VSEDDIKKAEDDIQKKTDKYIKEIDSIISAKEKEILSI 184


>gi|332289930|ref|YP_004420782.1| ribosome recycling factor [Gallibacterium anatis UMN179]
 gi|330432826|gb|AEC17885.1| ribosome recycling factor [Gallibacterium anatis UMN179]
          Length = 185

 Score =  157 bits (398), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 79/184 (42%), Positives = 118/184 (64%), Gaps = 4/184 (2%)

Query: 7   LQNIKD----RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           ++ IKD    RM  ++  LK  +  +RTGR  PS+LD + VE YG+  PL QVANV   +
Sbjct: 2   IKTIKDEAQQRMEKSVEALKNQISKIRTGRAHPSLLDGIHVEYYGAATPLRQVANVVAED 61

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R L ++V+D+ ++++VE+ I  S+LGLNP   G V+R+P+P  TEERR  L K+  A A
Sbjct: 62  ARTLAITVFDRSLISAVEKAIMASDLGLNPASAGTVIRVPLPPLTEERRRDLTKIVRAEA 121

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E+ +++VRNIRRD  D +K   K  + SE+     +++IQK+TD  +K +D    EK+KE
Sbjct: 122 EQGRVAVRNIRRDANDKIKALLKEKEISENDERKAQDEIQKLTDLYVKKVDEALAEKEKE 181

Query: 183 IMHF 186
           +M F
Sbjct: 182 LMDF 185


>gi|330817436|ref|YP_004361141.1| Ribosome releasing factor [Burkholderia gladioli BSR3]
 gi|327369829|gb|AEA61185.1| Ribosome releasing factor [Burkholderia gladioli BSR3]
          Length = 186

 Score =  157 bits (398), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+ + R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLADARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I ES+LGLNP   G  +R+P+P  TEERR  L KV  + AE +K+
Sbjct: 68  VQPWEKPMVAKVEKAIRESDLGLNPATSGDAIRVPMPALTEERRRELAKVVKSEAETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRASDDVQKLTDKYVAEIDKLAQTKEAEIM 184


>gi|152976190|ref|YP_001375707.1| ribosome recycling factor [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189044044|sp|A7GRF4|RRF_BACCN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|152024942|gb|ABS22712.1| ribosome recycling factor [Bacillus cytotoxicus NVH 391-98]
          Length = 185

 Score =  157 bits (398), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 115/174 (66%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+LV+  +
Sbjct: 11  EKMEKAVAAYSRELATVRAGRASASILDKVQVDYYGAPTPVVQLANITVPEARLLVIQPY 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE +K+++RN
Sbjct: 71  DKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRELVKVVKKYAEDAKVAIRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K++EIM 
Sbjct: 131 VRRDGNDELKKLEKAGEMTEDDLRGYTEDIQKETDKYIAKVDEIAKNKEQEIME 184


>gi|289208668|ref|YP_003460734.1| ribosome recycling factor [Thioalkalivibrio sp. K90mix]
 gi|288944299|gb|ADC71998.1| ribosome recycling factor [Thioalkalivibrio sp. K90mix]
          Length = 185

 Score =  157 bits (398), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 116/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ + RM  +I  L+ ++  +RTGR  PS+L+ V V+ YG  VP+NQVAN+   + R L
Sbjct: 6   IKDARQRMDKSIEALRNELAKIRTGRAHPSLLEHVHVDYYGMEVPINQVANINAEDSRTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  ++K+MVA VE+ I  S+LGLNP   G V+R+P+P  TEERR  LVKV  A AE ++
Sbjct: 66  AVVPYEKDMVAKVEKAIMTSDLGLNPASMGTVIRVPLPALTEERRRDLVKVVRAEAENAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD  +  K++ K  + SED     +  +QK+TD  I  ID+  E+K+ E+M
Sbjct: 126 VAVRNIRRDANNTFKQAVKDKEVSEDEERKAQEQVQKLTDDHIAKIDALLEDKEAELM 183


>gi|242278734|ref|YP_002990863.1| ribosome recycling factor [Desulfovibrio salexigens DSM 2638]
 gi|242121628|gb|ACS79324.1| ribosome recycling factor [Desulfovibrio salexigens DSM 2638]
          Length = 185

 Score =  157 bits (398), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 79/186 (42%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N+V  L + K RM   ++ L+ D   LRTGR + S++D + V+ YG+  P+NQ+A+V++
Sbjct: 2   INEV--LADGKKRMEGALTALENDFAKLRTGRAATSLVDNISVDYYGTPTPINQLASVSI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + +  WDK     +++ + +S+LGLNP+ +G+VLRI +P  TEERR  LVK+A  
Sbjct: 60  PDSRTISIQPWDKGAFPLIDKALQQSDLGLNPVNDGKVLRIAIPPLTEERRKELVKIAKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E SKI++RN+RRD  D LKK  K    SED     ++D+QKITD  +K  D    EK+
Sbjct: 120 YTEDSKIAIRNVRRDMNDTLKKLEKDKDISEDEQRKAQDDVQKITDGYVKKCDVACGEKE 179

Query: 181 KEIMHF 186
           KEI+  
Sbjct: 180 KEILEI 185


>gi|16272749|ref|NP_438968.1| ribosome recycling factor [Haemophilus influenzae Rd KW20]
 gi|148827996|ref|YP_001292749.1| ribosome recycling factor [Haemophilus influenzae PittGG]
 gi|260579900|ref|ZP_05847730.1| ribosome recycling factor [Haemophilus influenzae RdAW]
 gi|1173172|sp|P44307|RRF_HAEIN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230791|sp|A5UHW0|RRF_HAEIG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|1573820|gb|AAC22467.1| ribosome releasing factor (rrf) [Haemophilus influenzae Rd KW20]
 gi|148719238|gb|ABR00366.1| ribosome recycling factor [Haemophilus influenzae PittGG]
 gi|260093184|gb|EEW77117.1| ribosome recycling factor [Haemophilus influenzae RdAW]
          Length = 185

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV  
Sbjct: 2   LNQI--KKDAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+   
Sbjct: 60  EDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ K++VRN+RRD  D +K   K  + SE+     E +IQKITD  IK +D    +K+
Sbjct: 120 EGEQGKVAVRNVRRDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEVLADKE 179

Query: 181 KEIMHF 186
           KE+M F
Sbjct: 180 KELMDF 185


>gi|331001980|ref|ZP_08325500.1| ribosome-recycling factor [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411776|gb|EGG91181.1| ribosome-recycling factor [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 184

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 117/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  +I  L ++   +R GR +P +LD +KV+ YG+  P+ QV NV+V EPR++
Sbjct: 5   IKKFEEKMNKSIDVLLEEYAAIRAGRANPHVLDRIKVDYYGTATPIQQVGNVSVPEPRII 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S W+K ++  +E+ I+ S+LG+NP  +G  +R+  PE TEERR  LVK      E  K
Sbjct: 65  QISPWEKSLLKEIEKAINMSDLGINPTNDGSCIRLVFPELTEERRKELVKDVKKKGEACK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD +D +KK  K+G+ +ED V   EN IQK+TD  I+ +D   E+K KEI+
Sbjct: 125 VAIRNIRRDAIDAVKKLEKAGEFTEDDVKDGENKIQKMTDKAIERVDKAIEDKSKEIL 182


>gi|320450765|ref|YP_004202861.1| ribosome recycling factor [Thermus scotoductus SA-01]
 gi|320150934|gb|ADW22312.1| ribosome recycling factor [Thermus scotoductus SA-01]
          Length = 185

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 112/171 (65%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++  L+ ++  LRTGR +P++L  +KVE YG+HVPLNQ+A VT  + + LVV  WD+
Sbjct: 14  MQKSLEALEHNLAGLRTGRANPALLLHLKVEYYGTHVPLNQIATVTAPDAKTLVVQSWDQ 73

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++E+ I +S+LGLNP  +G  L I +P  TEERR  LVK A  YAE+ +I++RNIR
Sbjct: 74  NALKAIEKAIRDSDLGLNPANKGDALYINIPPLTEERRKELVKTARHYAEEGRIAIRNIR 133

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R+ ++ LKK  K    SED     E +IQKITD  I   D   E+K++EI+
Sbjct: 134 REALEKLKKLSKELHLSEDDTKRAEAEIQKITDEFIAKADELLEKKEQEIL 184


>gi|218781002|ref|YP_002432320.1| ribosome recycling factor [Desulfatibacillum alkenivorans AK-01]
 gi|226703258|sp|B8FGE3|RRF_DESAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|218762386|gb|ACL04852.1| ribosome recycling factor [Desulfatibacillum alkenivorans AK-01]
          Length = 185

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 119/176 (67%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   I+ L+K ++ +RTGR S SMLD VK++ YG+  P+NQ A V + E R++ +  
Sbjct: 10  REKMDKAIAALEKGLLRVRTGRASLSMLDGVKLDYYGTPTPINQAATVAIPESRLITIQP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD  ++  +E+ I +S+LGLNP  +G+++RI +P  TE+RR  +VK+ +  +E+ KISVR
Sbjct: 70  WDASVIKDIEKAILKSDLGLNPSNDGKIIRIAIPPLTEDRRKEMVKLVNKMSEEGKISVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD  + +K  +K G  +ED+    ++++QKITD  +K +D    +K+KEI+ F
Sbjct: 130 NIRRDANETIKSMKKDGDIAEDLAFKGQDEVQKITDDFVKKVDDICAQKEKEILEF 185


>gi|15673991|ref|NP_268166.1| ribosome recycling factor [Lactococcus lactis subsp. lactis Il1403]
 gi|281492614|ref|YP_003354594.1| ribosome recycling factor [Lactococcus lactis subsp. lactis KF147]
 gi|13878747|sp|Q9CE39|RRF_LACLA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|12725055|gb|AAK06107.1|AE006430_12 ribosome recycling factor [Lactococcus lactis subsp. lactis Il1403]
 gi|281376278|gb|ADA65769.1| Ribosome recycling factor [Lactococcus lactis subsp. lactis KF147]
 gi|326407547|gb|ADZ64618.1| ribosome recycling factor [Lactococcus lactis subsp. lactis CV56]
          Length = 185

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 120/176 (68%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +DRM  ++  L++D+  +R GR + S+LD V+V  YG+  PLNQ+A++T+ E R+L+V+ 
Sbjct: 10  QDRMKQSLGSLQRDLGHIRAGRANASLLDRVQVVYYGAPTPLNQLASITIPEARVLMVTP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  +E+ ++ES+LG+ P  +G V+R+ +P  TEERR  LVK    Y E +K+++R
Sbjct: 70  FDKSILKDIEKALYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKYIESAKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD MD  KKS K+ + +ED +  LEN+IQK+TD  +K  D     K+KE++  
Sbjct: 130 NIRRDAMDTAKKSEKAKEITEDDLKDLENNIQKVTDDAVKEADRLASIKEKELLDI 185


>gi|261367153|ref|ZP_05980036.1| ribosome recycling factor [Subdoligranulum variabile DSM 15176]
 gi|282571279|gb|EFB76814.1| ribosome recycling factor [Subdoligranulum variabile DSM 15176]
          Length = 184

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 115/176 (65%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            +++M  ++  L +++ ++R GR +P++LD V V+ YGS  P+NQ+A V+V E R+L ++
Sbjct: 8   FEEKMNASVDHLVRELASIRAGRANPAVLDRVTVDYYGSPTPINQIAAVSVAEARILTIT 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WD++M+  + + I  S++G+NPI +GQV+R+  P  TEERR  L K      E++K++V
Sbjct: 68  PWDRQMLKPISKAIQTSDIGINPIDDGQVIRLVFPAPTEERRKQLTKDVQKQGEEAKVAV 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RN+RRD MD  K  +K+G+ +ED    LE + QK+TD  +K ID     K KEIM 
Sbjct: 128 RNVRRDAMDKFKAMKKAGELTEDDQKKLEEETQKLTDKYVKMIDETCAAKNKEIME 183


>gi|120610506|ref|YP_970184.1| ribosome recycling factor [Acidovorax citrulli AAC00-1]
 gi|166230402|sp|A1TN72|RRF_ACIAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120588970|gb|ABM32410.1| ribosome recycling factor [Acidovorax citrulli AAC00-1]
          Length = 186

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 116/177 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I   K ++  +RTGR +P++LD V+VE YGS VPL+QVANV++++ R + 
Sbjct: 8   KNTEAKMDQSIVAFKNNLAKIRTGRANPALLDSVQVEYYGSMVPLSQVANVSLIDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A +E+ I ES LGLNP   G ++R+P+P  +EERR  + K+A    E +K+
Sbjct: 68  VQPWEKGMGAKIEKAIRESELGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + +KK  K   ASED     E DIQK+TD  I  +D+    K++EIM
Sbjct: 128 AVRNLRRDANESVKKLVKDKLASEDEQKRAEADIQKVTDKHIAEVDALVAAKEQEIM 184


>gi|227488622|ref|ZP_03918938.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227543226|ref|ZP_03973275.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227091516|gb|EEI26828.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181035|gb|EEI62007.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 185

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 114/174 (65%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  T+   ++++  +RTGR +PSM + V  E YG   P+NQ+A ++V EPRML++  +
Sbjct: 11  ERMEATVDHTREELSHIRTGRANPSMFNGVIAEFYGQPTPINQMATISVPEPRMLLIKPY 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D   +  +ER I  S+LG+NP  +GQVLR+ VP+ TEERR  +VKVA +  E+ KI++RN
Sbjct: 71  DMNSMDDIERAIRNSDLGVNPTNDGQVLRVTVPQLTEERRREMVKVAKSKGEEGKIAIRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IRR GMD LKK +K G A ED V + E ++ K+T      ++   E K+K++M 
Sbjct: 131 IRRKGMDQLKKIQKDGDAGEDEVQAGEKELDKVTKKNETRVEELVEAKEKDLME 184


>gi|293390815|ref|ZP_06635149.1| ribosome recycling factor [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951349|gb|EFE01468.1| ribosome recycling factor [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 185

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   Q+ +DRM  ++  LK  +  +RTGR  PS+LD ++V+ YGS  PL Q+ANV  
Sbjct: 2   INQI--RQDAEDRMEKSLEALKGHIAKIRTGRAQPSLLDAIQVDYYGSATPLRQLANVVA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  A
Sbjct: 60  EDARTLAVTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRELIKIVKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ K+++RN+RRD  D +K   K  + SE+     E  IQK+TDS IK +D    +K+
Sbjct: 120 EGEQGKVAIRNVRRDANDKIKALLKDKEISENDQHKAEEVIQKLTDSFIKKVDDVLADKE 179

Query: 181 KEIMHF 186
           KE++ F
Sbjct: 180 KELLDF 185


>gi|229544425|ref|ZP_04433483.1| ribosome recycling factor [Bacillus coagulans 36D1]
 gi|229324910|gb|EEN90587.1| ribosome recycling factor [Bacillus coagulans 36D1]
          Length = 186

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 122/184 (66%), Gaps = 2/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQVID    KD+M   I   ++++ ++R GR + ++LD + ++ YG+  P+NQ+A+++V 
Sbjct: 4   NQVID--TAKDKMAKAIQAFQRELGSIRAGRANAALLDKITIDYYGARTPVNQLASISVP 61

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R++V+  +DK ++  +ER I +S+LGL P  +G V+R+ +P  TEERR  LVK+    
Sbjct: 62  EARLMVIQPYDKTVLGEIERAILKSDLGLTPNNDGSVIRLSIPPLTEERRKELVKLIKKE 121

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE++K+++RN+RRD  D LKK  K+G+ +ED       D+QKITD  I+ ID   + K++
Sbjct: 122 AEEAKVAIRNVRRDANDELKKQEKNGEITEDEHRGFAEDVQKITDQHIQKIDKMTKTKEQ 181

Query: 182 EIMH 185
           EIM 
Sbjct: 182 EIME 185


>gi|329767058|ref|ZP_08258586.1| ribosome-recycling factor [Gemella haemolysans M341]
 gi|328837783|gb|EGF87408.1| ribosome-recycling factor [Gemella haemolysans M341]
          Length = 185

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N+ +RM   I+ L++++ ++R G+ S ++LD + V+ YG   P+NQVA V+V EP+ML
Sbjct: 6   MNNLNERMEKAIASLRRELASIRAGKASAAVLDRLTVDYYGVPTPINQVAGVSVPEPKML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S ++K ++  +E+ I  S+LGLNP  +G V+RI  P  TEERR  L K+    +E +K
Sbjct: 66  VISPYEKTLLGDIEKVIQASDLGLNPANDGTVIRIVFPALTEERRKELAKLVGKESEGAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD MD +KK  KS + +ED +    +DIQK+TD  I  ID   +EK+ E+M 
Sbjct: 126 VAVRNVRRDAMDSMKKLEKSSQITEDDLKGYSDDIQKVTDKFIAEIDKVTKEKQDELMS 184


>gi|325290374|ref|YP_004266555.1| ribosome recycling factor [Syntrophobotulus glycolicus DSM 8271]
 gi|324965775|gb|ADY56554.1| ribosome recycling factor [Syntrophobotulus glycolicus DSM 8271]
          Length = 185

 Score =  157 bits (397), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  T+  L+K+ +T+R G  + SMLD + V+ YG+  P+NQVAN++V EPRML
Sbjct: 6   VKETEEKMKKTLEVLRKEFVTIRAGSANQSMLDKIMVDYYGTPTPINQVANISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W+K M+  VE+ I +S+LG+NP+ +G V+R+ +P+ T +RR  +V+     AE+++
Sbjct: 66  VIQPWEKTMIQPVEKAIMKSDLGINPVNDGSVVRLVIPQLTADRRTEIVRTVKKKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRRD  + +KK  K    SED     +  IQK+TD  IK+ID    +K+KEI   
Sbjct: 126 VSVRNIRRDMNEEIKKMEKDKTVSEDESKKGQEKIQKLTDKYIKDIDDVLSKKEKEITEV 185


>gi|238022655|ref|ZP_04603081.1| hypothetical protein GCWU000324_02564 [Kingella oralis ATCC 51147]
 gi|237865858|gb|EEP66994.1| hypothetical protein GCWU000324_02564 [Kingella oralis ATCC 51147]
          Length = 185

 Score =  157 bits (397), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 114/174 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  LK+++  +RTGR    +LD V+V+ YGS VP++QVANVT+L+ R + V V++
Sbjct: 12  KMQRSLEVLKENLAKVRTGRAHTGLLDQVEVDYYGSAVPVSQVANVTLLDARTIGVKVYE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             M A+VE+ I +SNLGLNP   G V+R+P+P  TEERR  L+KV  + AE  ++S+RN+
Sbjct: 72  SNMAAAVEKAIRDSNLGLNPAAMGDVIRVPMPMLTEERRKDLIKVVRSEAEDGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  DH+KK  K  + SED     E  IQK+TD  I  +D     K++++M  
Sbjct: 132 RRDANDHIKKLLKDKEISEDEARRGEEAIQKLTDKAIAEVDKILAAKEEDLMAI 185


>gi|261866956|ref|YP_003254878.1| ribosome recycling factor [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412288|gb|ACX81659.1| ribosome recycling factor [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 185

 Score =  157 bits (397), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ +DRM  ++  LK  +  +RTGR  PS+LD ++V+ YGS  PL Q+ANV   + R L 
Sbjct: 7   QDAEDRMEKSLDALKGHIAKIRTGRAQPSLLDAIQVDYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  A  E+ K+
Sbjct: 67  VTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRELIKIVKAEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E  IQK+TDS IK +D    +K+KE++ F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENDQHKAEEVIQKLTDSFIKKVDDVLADKEKELLDF 185


>gi|170760155|ref|YP_001787743.1| ribosome recycling factor [Clostridium botulinum A3 str. Loch
           Maree]
 gi|238688518|sp|B1KWM1|RRF_CLOBM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169407144|gb|ACA55555.1| ribosome recycling factor [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 184

 Score =  157 bits (397), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 119/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG +I  LK+++ +++ GR +P+MLD +  E YGS  PLNQ+AN++V E R+L
Sbjct: 6   LKKADEKMGKSIVALKRELASMKAGRANPAMLDRIDAEYYGSMTPLNQLANISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  + ++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKSSMGAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEETK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK IDS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKDD-VSEDDIKKTEDDIQKKTDKYIKEIDSIISAKEKEILSI 184


>gi|229845859|ref|ZP_04465971.1| ribosome recycling factor [Haemophilus influenzae 7P49H1]
 gi|229810863|gb|EEP46580.1| ribosome recycling factor [Haemophilus influenzae 7P49H1]
          Length = 185

 Score =  157 bits (396), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV  
Sbjct: 2   LNQI--KKDAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+   
Sbjct: 60  EDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRNLIKIVKG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ K+++RN+RRD  D +K   K  + SE+     E +IQKITD  IK +D    +K+
Sbjct: 120 EGEQGKVAIRNVRRDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEVLADKE 179

Query: 181 KEIMHF 186
           KE+M F
Sbjct: 180 KELMDF 185


>gi|158320548|ref|YP_001513055.1| ribosome recycling factor [Alkaliphilus oremlandii OhILAs]
 gi|166991552|sp|A8MHH2|RRF_ALKOO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|158140747|gb|ABW19059.1| ribosome recycling factor [Alkaliphilus oremlandii OhILAs]
          Length = 185

 Score =  157 bits (396), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 124/179 (69%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M  TI+ LK ++ ++R GR +P+MLD + VE YGS  P+ Q+A +T  EPR++ 
Sbjct: 7   KNLEEKMNKTINALKDELASIRAGRANPAMLDRIVVEYYGSPTPIKQIAAITAPEPRIIS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   ++S+E+ I +S+LG+NP  +G+++RI VP+ TEERR  L KVA   +E +K+
Sbjct: 67  IQPYDGSALSSIEKAILQSDLGVNPSNDGKLIRIIVPQLTEERRKELTKVAKKTSEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RN RR+  D LKK +K  + +ED + + ++++QKITD  IK +D   E+K+K+IM  
Sbjct: 127 VLRNERRNANDRLKKMQKDNEITEDELKTAQDEVQKITDKFIKMVDELTEKKEKDIMEV 185


>gi|253573556|ref|ZP_04850899.1| ribosome recycling factor [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251847084|gb|EES75089.1| ribosome recycling factor [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 184

 Score =  157 bits (396), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 118/185 (63%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M Q I  ++ ++RM   I  L++D+ TLR GR +PS+LD ++V+ YGS  P+NQ+AN+  
Sbjct: 1   MPQTIK-KHAEERMEKAIQALRRDLSTLRAGRATPSLLDRIQVDYYGSPTPINQLANINT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L++  WDK  ++ +ER I +S+LGL P  +G  +R+ +P  TEERR+ LVK+   
Sbjct: 60  PDSRTLLIQPWDKSSLSEIERAIQKSDLGLTPANDGSSIRLTIPALTEERRIELVKMTKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + E++K+++RNIRRD  D +KK  K+   SED     + DIQK TD  I  +D     K+
Sbjct: 120 FGEEAKVAIRNIRRDANDDIKKLEKTD-ISEDESRRHQEDIQKTTDKFIAEVDKVLAAKE 178

Query: 181 KEIMH 185
           KEIM 
Sbjct: 179 KEIME 183


>gi|217967587|ref|YP_002353093.1| ribosome recycling factor [Dictyoglomus turgidum DSM 6724]
 gi|217336686|gb|ACK42479.1| ribosome recycling factor [Dictyoglomus turgidum DSM 6724]
          Length = 185

 Score =  157 bits (396), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 115/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            + I+++M   +  +KK+   +RTG+ S  + D +KV  YG+ +PLNQVA + V E R +
Sbjct: 6   FKEIEEKMKKAVEVVKKEFQNIRTGKPSVGIFDEIKVSYYGNMMPLNQVATLKVAEGRTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK ++  +E+ I +S LGL P  +GQV+R+  P  TEERR  LVK+ H  AE  +
Sbjct: 66  LIQPWDKSIIGEIEKAILKSELGLTPQNDGQVIRVVFPPLTEERRKELVKIVHKEAETGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD ++  KK ++ GK SED    L+ ++QKITD  I+ I+   E K+KEIM 
Sbjct: 126 VAIRNIRRDYLEIFKKEKQEGKISEDEFYRLQEELQKITDKFIEEIEKLIEMKEKEIME 184


>gi|269966254|ref|ZP_06180343.1| Ribosome-recycling factor [Vibrio alginolyticus 40B]
 gi|269829169|gb|EEZ83414.1| Ribosome-recycling factor [Vibrio alginolyticus 40B]
          Length = 185

 Score =  157 bits (396), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKIRTGRAHPSLLSGISVEYYGAATPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAIMTSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     +++IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDEDRKAQDEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|224368820|ref|YP_002602981.1| ribosome recycling factor [Desulfobacterium autotrophicum HRM2]
 gi|259494538|sp|C0QB20|RRF_DESAH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|223691536|gb|ACN14819.1| Frr [Desulfobacterium autotrophicum HRM2]
          Length = 185

 Score =  157 bits (396), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 114/176 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +DRM  ++  L+K+M  +RTGR S +MLD VKV+ YG+  PLNQ+A++ + E RM+ V  
Sbjct: 10  RDRMVKSVKTLEKEMTRVRTGRASMTMLDGVKVDYYGTLTPLNQMASIAIPESRMITVQP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD   +  VE+GI ++N+GL P  +G+++RI +P  TE+RR  + K  H   E+ K++VR
Sbjct: 70  WDISAIKEVEKGILKANIGLTPSSDGKIIRITIPPLTEDRRREIAKTVHNTCEEFKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD  D LK  +K G  SED     + ++Q ITD  IK I++ F  K+KEI+  
Sbjct: 130 NIRRDSNDTLKSLQKDGDISEDENFKAQKEVQDITDEFIKQIEAVFAAKEKEILEL 185


>gi|329769638|ref|ZP_08261042.1| ribosome-recycling factor [Gemella sanguinis M325]
 gi|328838393|gb|EGF88002.1| ribosome-recycling factor [Gemella sanguinis M325]
          Length = 185

 Score =  157 bits (396), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N+ +RM   I+ L++++ ++R G+ S S+LD + V+ YG   P+NQVA ++V EP+ML
Sbjct: 6   MNNLNERMEKAIANLRRELASIRAGKASASVLDRLTVDYYGVATPINQVAGISVPEPKML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S ++K ++  +E+ I  S+LGLNP  +G V+RI  P  TEERR  L K+    +E +K
Sbjct: 66  VISPYEKTLLGDIEKAIQASDLGLNPANDGTVIRIVFPALTEERRKELAKLVGKESEGAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD MD +KK  K+ + +ED +    +DIQK TD  +  ID   +EK+ E+M 
Sbjct: 126 VAVRNVRRDAMDSMKKLEKASQITEDDLKGYSDDIQKATDKYVAEIDKVTKEKQDELMS 184


>gi|227484637|ref|ZP_03914953.1| ribosome recycling factor [Anaerococcus lactolyticus ATCC 51172]
 gi|227237357|gb|EEI87372.1| ribosome recycling factor [Anaerococcus lactolyticus ATCC 51172]
          Length = 186

 Score =  157 bits (396), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 112/172 (65%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+   +K + T++ GR + ++LD +    YG+  P+NQ A V++ E R+LV+  WDK
Sbjct: 14  MQKTVDSFEKRIATIKAGRATEAILDGITFSYYGTETPINQAATVSIPEARLLVIKPWDK 73

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E+ I +SN+G+ P  +G+++R+P P  TE+RR    K  + YAE +KI VRN+R
Sbjct: 74  NNIGPIEKAILKSNIGITPGNDGEIIRLPFPALTEDRRKEYTKEVNTYAEDAKIVVRNVR 133

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RD MD +KKS KSG  +ED    LE++IQK+TD  IK I+   E+K KE+M+
Sbjct: 134 RDSMDEVKKSEKSGDITEDDRYKLEDEIQKVTDKFIKTIEEMTEKKNKELMN 185


>gi|68249403|ref|YP_248515.1| ribosome recycling factor [Haemophilus influenzae 86-028NP]
 gi|145630555|ref|ZP_01786335.1| ribosome recycling factor [Haemophilus influenzae R3021]
 gi|145632167|ref|ZP_01787902.1| ribosome recycling factor [Haemophilus influenzae 3655]
 gi|145634780|ref|ZP_01790488.1| ribosome recycling factor [Haemophilus influenzae PittAA]
 gi|145636632|ref|ZP_01792299.1| ribosome recycling factor [Haemophilus influenzae PittHH]
 gi|145640909|ref|ZP_01796491.1| ribosome recycling factor [Haemophilus influenzae R3021]
 gi|229844676|ref|ZP_04464815.1| ribosome recycling factor [Haemophilus influenzae 6P18H1]
 gi|260581625|ref|ZP_05849422.1| ribosome recycling factor [Haemophilus influenzae NT127]
 gi|319775258|ref|YP_004137746.1| ribosome recycling factor [Haemophilus influenzae F3047]
 gi|319897698|ref|YP_004135895.1| ribosome recycling factor [Haemophilus influenzae F3031]
 gi|329122815|ref|ZP_08251387.1| ribosome recycling factor [Haemophilus aegyptius ATCC 11116]
 gi|81336171|sp|Q4QM92|RRF_HAEI8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|68057602|gb|AAX87855.1| ribosome recycling factor [Haemophilus influenzae 86-028NP]
 gi|144983945|gb|EDJ91387.1| ribosome recycling factor [Haemophilus influenzae R3021]
 gi|144987074|gb|EDJ93604.1| ribosome recycling factor [Haemophilus influenzae 3655]
 gi|145267946|gb|EDK07942.1| ribosome recycling factor [Haemophilus influenzae PittAA]
 gi|145270158|gb|EDK10094.1| ribosome recycling factor [Haemophilus influenzae PittHH]
 gi|145274423|gb|EDK14287.1| ribosome recycling factor [Haemophilus influenzae 22.4-21]
 gi|229812390|gb|EEP48080.1| ribosome recycling factor [Haemophilus influenzae 6P18H1]
 gi|260095218|gb|EEW79109.1| ribosome recycling factor [Haemophilus influenzae NT127]
 gi|301169527|emb|CBW29128.1| ribosome recycling factor [Haemophilus influenzae 10810]
 gi|309973700|gb|ADO96901.1| Ribosome releasing factor [Haemophilus influenzae R2846]
 gi|317433204|emb|CBY81578.1| ribosome recycling factor [Haemophilus influenzae F3031]
 gi|317449849|emb|CBY86059.1| ribosome recycling factor [Haemophilus influenzae F3047]
 gi|327472079|gb|EGF17517.1| ribosome recycling factor [Haemophilus aegyptius ATCC 11116]
          Length = 185

 Score =  157 bits (396), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV  
Sbjct: 2   LNQI--KKDAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+   
Sbjct: 60  EDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ K+++RN+RRD  D +K   K  + SE+     E +IQKITD  IK +D    +K+
Sbjct: 120 EGEQGKVAIRNVRRDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEVLADKE 179

Query: 181 KEIMHF 186
           KE+M F
Sbjct: 180 KELMDF 185


>gi|145628296|ref|ZP_01784097.1| ribosome recycling factor [Haemophilus influenzae 22.1-21]
 gi|145638390|ref|ZP_01794000.1| ribosome recycling factor [Haemophilus influenzae PittII]
 gi|144980071|gb|EDJ89730.1| ribosome recycling factor [Haemophilus influenzae 22.1-21]
 gi|145272719|gb|EDK12626.1| ribosome recycling factor [Haemophilus influenzae PittII]
 gi|309751530|gb|ADO81514.1| Ribosome releasing factor [Haemophilus influenzae R2866]
          Length = 185

 Score =  157 bits (396), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV  
Sbjct: 2   LNQI--KKDAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+   
Sbjct: 60  EDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ K+++RN+RRD  D +K   K  + SE+     E +IQKITD  IK +D    +K+
Sbjct: 120 EGEQGKVAIRNVRRDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEVLTDKE 179

Query: 181 KEIMHF 186
           KE+M F
Sbjct: 180 KELMDF 185


>gi|303325662|ref|ZP_07356105.1| ribosome recycling factor [Desulfovibrio sp. 3_1_syn3]
 gi|302863578|gb|EFL86509.1| ribosome recycling factor [Desulfovibrio sp. 3_1_syn3]
          Length = 186

 Score =  157 bits (396), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRM   ++ L +D   LRTGR S +++D +K + YG+  P++Q+A+V V + R L
Sbjct: 7   LLDAEDRMEKALAALDRDFAKLRTGRASTALVDGIKADYYGTPTPVSQMASVAVPDSRTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  +A+VE+ I +S+LGL P+ +G+++RI +P  TEERR  LVKVA  Y+E++K
Sbjct: 67  TIQPWDKGGIAAVEKAILKSDLGLTPVNDGKIIRIVIPPLTEERRKDLVKVARKYSEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K  + +ED +    +D+QK+TD  + ++D     K+KEIM  
Sbjct: 127 VAVRNVRRDANDGLKKLEKDKEITEDELKKAVDDVQKLTDKFVGDVDKKCAGKEKEIMDI 186


>gi|317495174|ref|ZP_07953544.1| ribosome recycling protein [Gemella moribillum M424]
 gi|316914596|gb|EFV36072.1| ribosome recycling protein [Gemella moribillum M424]
          Length = 185

 Score =  157 bits (396), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N+ +RM   I+ L++++ ++R G+ S ++LD + V+ YG   P+NQVA V+V EP+ML
Sbjct: 6   MNNLNERMEKAIASLRRELASIRAGKASAAVLDRLTVDYYGVATPINQVAGVSVPEPKML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S ++K ++  +ER I  S+LGLNP  +G V+RI  P  TEERR  L K+    +E +K
Sbjct: 66  VISPYEKTLLGDIERAIQASDLGLNPSNDGSVIRIVFPALTEERRKELAKLVGKESEGAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD +D +KK  K+ + +ED +    +DIQK+TD  +  ID   +EK+ E+M 
Sbjct: 126 VAVRNVRRDAIDAMKKLEKASQITEDDLKGYSDDIQKVTDKFVAEIDKVTKEKQDELMS 184


>gi|15603852|ref|NP_246926.1| ribosome recycling factor [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431830|sp|P57984|RRF_PASMU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|12722427|gb|AAK04071.1| Errf [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 185

 Score =  157 bits (396), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++   K  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L V+V+D
Sbjct: 12  RMEKSLETFKNHIAKVRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLAVTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ KI+VRN+
Sbjct: 72  RSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEAEQGKIAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     +++IQKITD+ +K +D    +K+KE++ F
Sbjct: 132 RRDANDQIKALLKDKEISEDEERKAQDEIQKITDTFVKKVDEVLADKEKELLDF 185


>gi|152978335|ref|YP_001343964.1| ribosome recycling factor [Actinobacillus succinogenes 130Z]
 gi|171704207|sp|A6VM32|RRF_ACTSZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|150840058|gb|ABR74029.1| ribosome recycling factor [Actinobacillus succinogenes 130Z]
          Length = 185

 Score =  157 bits (396), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++V+ YG+  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVDYYGAATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+  A  E+ K+
Sbjct: 67  VTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLTKLVKAEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + +K   K  + SE+     E+DIQK+TDS +K +D    +K+KE+M F
Sbjct: 127 AVRNVRRDANEKIKALLKDKEISENEQRKAEDDIQKLTDSFVKKVDEVLADKEKELMDF 185


>gi|170727617|ref|YP_001761643.1| ribosome recycling factor [Shewanella woodyi ATCC 51908]
 gi|238688707|sp|B1KNU0|RRF_SHEWM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169812964|gb|ACA87548.1| ribosome recycling factor [Shewanella woodyi ATCC 51908]
          Length = 185

 Score =  157 bits (396), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 111/178 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM   +   K  M  +RTGR  PS+LD +KV  YGS  PL QV NV++ + R L 
Sbjct: 7   KDAQDRMDKCVEATKTQMAKVRTGRAHPSLLDSIKVPYYGSLTPLKQVGNVSIEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D  M+ +VE+ I  S+LGLNP+  G  +R+P+P  TEERR  L+KV  A AE  +I
Sbjct: 67  ISVFDSTMIPAVEKAIMSSDLGLNPMSAGATIRVPLPALTEERRKDLIKVVRAEAENGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +VRN+RRD    +K   K  + +ED V   E+++QK TD+ IK ID     K+ E+M 
Sbjct: 127 AVRNVRRDANSDVKALEKEKECTEDDVHRSEDEVQKFTDAHIKLIDEILAAKEAELME 184


>gi|187778975|ref|ZP_02995448.1| hypothetical protein CLOSPO_02570 [Clostridium sporogenes ATCC
           15579]
 gi|187772600|gb|EDU36402.1| hypothetical protein CLOSPO_02570 [Clostridium sporogenes ATCC
           15579]
          Length = 184

 Score =  157 bits (396), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 120/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG TI  LK+++ +++ GR +P+MLD ++ E YGS  PLNQ+ N++V E R+L
Sbjct: 6   LKKADEKMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  ++++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK +DS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKDD-VSEDDIKKAEDDIQKKTDKYIKEVDSIISVKEKEILSI 184


>gi|313904228|ref|ZP_07837607.1| ribosome recycling factor [Eubacterium cellulosolvens 6]
 gi|313471030|gb|EFR66353.1| ribosome recycling factor [Eubacterium cellulosolvens 6]
          Length = 184

 Score =  157 bits (396), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 77/173 (44%), Positives = 111/173 (64%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  TI+ L  ++ T+R GR +P +LD + VE YG+  PL QVAN+TV E R++ +  W
Sbjct: 10  EKMTKTIANLDSELATIRAGRANPHVLDRITVEYYGAPTPLQQVANITVPEARIIQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +  MV  + + I  S LG+NP  +G+V+R+  PE TE+RR  L K      E +K+++RN
Sbjct: 70  EASMVKEIVKAIQMSELGINPSTDGKVVRLIFPELTEDRRKELTKDVKKKGEAAKVAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRD  D  KK  K+   SED++A LE D+QK+TD  IK+ID   E K KE+M
Sbjct: 130 IRRDANDSFKKLEKAEDLSEDIIAGLEEDVQKLTDKYIKDIDKAVEVKSKELM 182


>gi|116327676|ref|YP_797396.1| ribosome recycling factor [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330591|ref|YP_800309.1| ribosome recycling factor [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281654|sp|Q04U69|RRF_LEPBJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122284528|sp|Q053N2|RRF_LEPBL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116120420|gb|ABJ78463.1| Ribosome recycling factor [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124280|gb|ABJ75551.1| Ribosome recycling factor [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 184

 Score =  157 bits (396), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 120/177 (67%), Gaps = 2/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +K +M  TI  +KKD  T+RTGR +PS+++ ++V+ YG+  P+NQ+ N++V EPRML
Sbjct: 7   ISGMKTKMDKTIDLVKKDFGTVRTGRANPSLVEDIRVDYYGTLTPINQLGNISVPEPRML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK ++  +E+ I  S LGL P  +G V+RI +PE T ERR  L K+  + +E+ K
Sbjct: 67  VISPYDKGIMKDIEKAIQASGLGLQPSNDGVVIRIIIPELTGERRKELAKIVKSKSEEKK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD M+ LKK  +    S+D + ++++ IQK TDS I  I +   EK+KEI
Sbjct: 127 VAIRNIRRDAMEDLKKHTEG--LSQDEIKTIQDRIQKTTDSYIDKISALTAEKEKEI 181


>gi|172057857|ref|YP_001814317.1| ribosome recycling factor [Exiguobacterium sibiricum 255-15]
 gi|229564225|sp|B1YI73|RRF_EXIS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|171990378|gb|ACB61300.1| ribosome recycling factor [Exiguobacterium sibiricum 255-15]
          Length = 185

 Score =  156 bits (395), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 119/185 (64%), Gaps = 1/185 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+Q I ++  ++RM      LKK++ TLR GR + S+LD V+V+ YGS  PLNQVANV  
Sbjct: 1   MSQAI-MKQAEERMEKAHLSLKKELATLRAGRANVSILDPVQVDYYGSPTPLNQVANVNT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+++++ WDK MV  +E+ I  ++LGL P  +G V+R+ +P  TE+RR  LVK+   
Sbjct: 60  PEARLILITPWDKSMVTEIEKAIQRADLGLAPSSDGTVIRLAIPPLTEDRRKELVKLVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E+ K+++RNIRRD  + LKK  K G  +ED +     D+Q +TD  +K +D    +K+
Sbjct: 120 YTEEGKVALRNIRRDTNEQLKKQEKDGVLTEDDLRGYTEDVQTLTDKFVKVLDQTAADKE 179

Query: 181 KEIMH 185
           +EIM 
Sbjct: 180 QEIME 184


>gi|125625049|ref|YP_001033532.1| Frr protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|166230795|sp|A2RNG1|RRF_LACLM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|124493857|emb|CAL98850.1| Frr protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071855|gb|ADJ61255.1| ribosome recycling factor [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 185

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 121/176 (68%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM  +++ L++D+  LR GR + S+LD V+V  YG+  PLNQ+A++T+ E R+L+V+ 
Sbjct: 10  QERMKHSLASLQRDLGHLRAGRANASLLDRVQVVYYGAPTPLNQLASITIPEARVLMVTP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  +E+ ++ES+LG+ P  +G V+R+ +P  TEERR  LVK    Y E +K+++R
Sbjct: 70  FDKSILKDIEKALYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKYIESAKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD MD  KKS K+ + +ED +  LEN+IQK+TD  +K  D     K+KE++  
Sbjct: 130 NIRRDAMDTAKKSEKAKEITEDDLKDLENEIQKVTDDAVKEADRLASVKEKELLDI 185


>gi|91223476|ref|ZP_01258741.1| ribosome releasing factor [Vibrio alginolyticus 12G01]
 gi|262393522|ref|YP_003285376.1| ribosome recycling factor [Vibrio sp. Ex25]
 gi|91191562|gb|EAS77826.1| ribosome releasing factor [Vibrio alginolyticus 12G01]
 gi|262337116|gb|ACY50911.1| ribosome recycling factor [Vibrio sp. Ex25]
          Length = 185

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKIRTGRAHPSLLSGISVEYYGAATPLNQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAIMTSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     +++IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDEDRKAQDEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|260913177|ref|ZP_05919659.1| ribosome recycling factor [Pasteurella dagmatis ATCC 43325]
 gi|260632764|gb|EEX50933.1| ribosome recycling factor [Pasteurella dagmatis ATCC 43325]
          Length = 185

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++   K  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L 
Sbjct: 7   KDTQARMEKSLETFKNHIAKVRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ KI
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEAEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     +++IQKITD  +K +D    +K+KE+M F
Sbjct: 127 AVRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDLYVKKVDEVLADKEKELMDF 185


>gi|270264817|ref|ZP_06193081.1| ribosome-recycling factor [Serratia odorifera 4Rx13]
 gi|270041115|gb|EFA14215.1| ribosome-recycling factor [Serratia odorifera 4Rx13]
          Length = 199

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 116/174 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++   K  +  +RTGR SPS+LD + VE YGS  PL Q+ANVTV + R L ++++D
Sbjct: 26  RMEKSVEAFKTQISKIRTGRASPSILDGIMVEYYGSATPLRQLANVTVEDSRTLAINLFD 85

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + ++VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +++VRN+
Sbjct: 86  RSLGSAVEKAIMSSDLGLNPSSAGSVIRVPLPPLTEERRKDLIKVVRNEAEQGRVAVRNV 145

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+KE+M F
Sbjct: 146 RRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKLLDAALADKEKELMEF 199


>gi|187928370|ref|YP_001898857.1| ribosome recycling factor [Ralstonia pickettii 12J]
 gi|238691813|sp|B2UB09|RRF_RALPJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|187725260|gb|ACD26425.1| ribosome recycling factor [Ralstonia pickettii 12J]
          Length = 186

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I  LK D+  +RTGR    +LD V+V+ YGS VP++QVANVT+++ R + 
Sbjct: 8   KNAEQKMQKSIEALKTDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANVTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I E++LGLNP   G ++R+P P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKKMVQAVEKAIREADLGLNPATMGDIIRVPTPALTEERRKELTKVVKGEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + LKK  K    SED      +++QK+TD  +  ID    EK KEIM
Sbjct: 128 AVRNLRRDANEQLKKLVKDKAISEDDERRGGDEVQKLTDKFVAEIDKLVAEKDKEIM 184


>gi|239631340|ref|ZP_04674371.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066628|ref|YP_003788651.1| ribosome recycling factor [Lactobacillus casei str. Zhang]
 gi|239525805|gb|EEQ64806.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439035|gb|ADK18801.1| Ribosome recycling factor [Lactobacillus casei str. Zhang]
          Length = 185

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 118/185 (63%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQ+ID   +   MG T   L++++  +R GR + S+L+ + VE YG+  PLNQ+A +T+ 
Sbjct: 3   NQIIDQAKVN--MGKTEESLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPR+L VS +DK  + ++E  ++ S+LG+NP  +G V+R+ +P+ T ERR  + K    Y
Sbjct: 61  EPRVLQVSPYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKY 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +E +KI+VRNIRR+G+D LK+  K G  +ED +  LE D+QK TD   K ID     K+K
Sbjct: 121 SESAKIAVRNIRREGLDKLKRQEKDGDITEDDLHRLEKDMQKATDDATKRIDEIAAAKEK 180

Query: 182 EIMHF 186
           EI   
Sbjct: 181 EITEV 185


>gi|148265750|ref|YP_001232456.1| ribosome recycling factor [Geobacter uraniireducens Rf4]
 gi|189044056|sp|A5G7W5|RRF_GEOUR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146399250|gb|ABQ27883.1| ribosome recycling factor [Geobacter uraniireducens Rf4]
          Length = 185

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 113/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N+   M  TI  L+K+   +RTGR S  +LD +KV+ YG+  P+NQVA + V EPR +
Sbjct: 6   INNMSTHMDKTIDALRKEYQRVRTGRASTGLLDEIKVDFYGTPSPINQVATLAVPEPRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD +M+  +E+ I  +NLGL P  +G+V+R+ +P  TEERR  +VK     AE +K
Sbjct: 66  TLQPWDAKMIPVIEKAIMNANLGLTPANDGKVIRLNIPPLTEERRKDIVKQLKKLAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD +D LKK  K  K SED +   E ++Q +T+S +  ID  F  K+KE+M 
Sbjct: 126 VAVRNIRRDAIDELKKQEKDKKISEDDLKRAEKEVQDVTNSHVAKIDEVFVHKEKEVME 184


>gi|291296165|ref|YP_003507563.1| ribosome recycling factor [Meiothermus ruber DSM 1279]
 gi|290471124|gb|ADD28543.1| ribosome recycling factor [Meiothermus ruber DSM 1279]
          Length = 185

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 112/174 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +  M  ++  L+  + T+RTGR +P++L+ +KVE YGS +PLNQV  V+  +PR LVV  
Sbjct: 10  RQHMQKSLEALEHHLTTMRTGRANPAILNNIKVEYYGSTMPLNQVGTVSSPDPRTLVVQS 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD  M+  +E+ I +S+LGLNP  +G  L I +P  TEERR  LVK    YAE+++I+VR
Sbjct: 70  WDPNMLKEIEKAIRDSDLGLNPTNKGDALYISIPPLTEERRRDLVKSVKQYAEEARIAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRR+ +D  KK  K    SED +   E +IQKITD  +  ID    +K++EI+
Sbjct: 130 NIRREALDKAKKLEKEKHLSEDDIKRAEAEIQKITDEFVHKIDEALHKKEQEIL 183


>gi|325105870|ref|YP_004275524.1| ribosome recycling factor [Pedobacter saltans DSM 12145]
 gi|324974718|gb|ADY53702.1| ribosome recycling factor [Pedobacter saltans DSM 12145]
          Length = 187

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/186 (46%), Positives = 116/186 (62%), Gaps = 3/186 (1%)

Query: 1   MNQVI--DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I  +L+  K  M   I+    ++M +R G+ SPSMLD V VE YGS  PL QVAN+
Sbjct: 1   MNEFIKLELEEAKATMQKAITHTDNELMKIRAGKASPSMLDGVLVEYYGSPTPLAQVANI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R +VV  W+K M+  +E+GI  SN GLNP  +G V+R+ VP  TEERR  LVK A
Sbjct: 61  NTPDARTIVVQPWEKSMIGPIEKGILNSNCGLNPQNDGSVVRLNVPPLTEERRKQLVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AE  KIS+RNIR++  + +KK +  G  SED + + E ++QKITD  I  ID   E 
Sbjct: 121 KEEAEAGKISIRNIRKNTNESIKKLKSEG-VSEDEIKAGEAEVQKITDGFIAKIDVMIEG 179

Query: 179 KKKEIM 184
           K+K+IM
Sbjct: 180 KEKDIM 185


>gi|312866459|ref|ZP_07726677.1| ribosome recycling factor [Streptococcus downei F0415]
 gi|311098153|gb|EFQ56379.1| ribosome recycling factor [Streptococcus downei F0415]
          Length = 185

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/183 (43%), Positives = 118/183 (64%), Gaps = 2/183 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N +ID  N  +R   +   L ++   +R GR + S+LD ++V+ YG+  PLNQ+A++TV 
Sbjct: 3   NPIIDKAN--ERFKHSHEALGREFSAIRAGRANASLLDRIEVDYYGAPTPLNQLASITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L++S +DK  +  +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K     
Sbjct: 61  EARVLLISPFDKNSIKEIERAINESDLGINPANDGSVIRLVIPALTEETRKDLAKEVKKL 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E +K+++RNIRRD MD  KK  K  + +ED + SLE DIQK TD  +K IDS   EK+K
Sbjct: 121 GENAKVAIRNIRRDAMDDAKKQEKDKEITEDELKSLEKDIQKATDDAVKKIDSMTNEKEK 180

Query: 182 EIM 184
           E++
Sbjct: 181 ELL 183


>gi|210622737|ref|ZP_03293329.1| hypothetical protein CLOHIR_01277 [Clostridium hiranonis DSM 13275]
 gi|210154069|gb|EEA85075.1| hypothetical protein CLOHIR_01277 [Clostridium hiranonis DSM 13275]
          Length = 185

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 116/178 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  TI  LK +  T+R GR + +MLD V+V+ YG+  P+NQ+A ++V EPR L+
Sbjct: 7   EQLEQKMDATIEALKFEFGTIRAGRANAAMLDKVRVDYYGTLTPINQMAAISVPEPRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WDK  +  +E+ I  S++GL P  +G V+R+ VP  TEERR  L K AH  +E  K+
Sbjct: 67  ITPWDKSSMHEIEKAIANSDVGLTPSNDGSVIRLSVPALTEERRKELAKKAHKASEDFKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            +RN RRD  D LKK  K+G+ +ED +     ++QKITD  IK IDS + +K+K+IM 
Sbjct: 127 RIRNERRDANDKLKKIEKAGEITEDELKKATEEVQKITDKYIKEIDSLYAKKEKDIME 184


>gi|116512953|ref|YP_811860.1| ribosome recycling factor [Lactococcus lactis subsp. cremoris SK11]
 gi|123320141|sp|Q02WC5|RRF_LACLS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116108607|gb|ABJ73747.1| ribosome recycling factor [Lactococcus lactis subsp. cremoris SK11]
          Length = 185

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 121/176 (68%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM  +++ L++D+  LR GR + S+LD V+V  YG+  PLNQ+A++T+ E R+L+V+ 
Sbjct: 10  QERMKHSLASLQRDLGHLRAGRANASLLDRVQVVYYGAPTPLNQLASITIPEARVLMVTP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  +E+ ++ES+LG+ P  +G V+R+ +P  TEERR  LVK    Y E +K+++R
Sbjct: 70  FDKSILKDIEKSLYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKYIESAKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD MD  KKS K+ + +ED +  LEN+IQK+TD  +K  D     K+KE++  
Sbjct: 130 NIRRDAMDTAKKSEKAKEITEDDLKDLENEIQKVTDDAVKEADRLASVKEKELLDI 185


>gi|184155193|ref|YP_001843533.1| ribosome recycling factor [Lactobacillus fermentum IFO 3956]
 gi|260662307|ref|ZP_05863203.1| ribosome recycling factor [Lactobacillus fermentum 28-3-CHN]
 gi|183226537|dbj|BAG27053.1| ribosome recycling factor [Lactobacillus fermentum IFO 3956]
 gi|260553690|gb|EEX26582.1| ribosome recycling factor [Lactobacillus fermentum 28-3-CHN]
          Length = 186

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M  +   LK+ +  +R GR + S+L+ V VE YG+  PLNQ+A++T+ E R L
Sbjct: 7   LAEAKEKMAKSGDALKRTLADIRAGRANASLLNTVTVEYYGAPTPLNQLASITIPEARQL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER I+ESNLGL P  +G+ +R+ VP+ TE+RR  LVK   A  EK+K
Sbjct: 67  LISPYDKTTLKDIERAIYESNLGLTPQNDGETIRLVVPQLTEDRRKELVKDVKAEMEKAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K G  ++D    LE  +Q+ TD+ IKN++    +K+KE++ 
Sbjct: 127 VAVRNVRREAMDDLKKGNKDGDFNDDEFHDLEKQVQEETDAGIKNLEQIAADKEKELLE 185


>gi|85712041|ref|ZP_01043095.1| Ribosome recycling factor [Idiomarina baltica OS145]
 gi|85694227|gb|EAQ32171.1| Ribosome recycling factor [Idiomarina baltica OS145]
          Length = 185

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K+RM  ++  L+  M  +RTGR  PS+LD V V  YG   PL Q+AN+T  + R L
Sbjct: 6   IKDAKERMEKSVESLRSQMSKVRTGRAHPSILDSVMVNYYGVDTPLKQLANITTEDSRTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++V+DK    +VE+ I  S+LGLNP   G V+RIP+P  TEERR  LVK+  A AE+++
Sbjct: 66  ALTVFDKSSAQAVEKAILTSDLGLNPASAGAVIRIPLPPLTEERRRDLVKIVRAEAEQAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + LK+  K  + +ED   S E+D+QK+TD+ +K ID   + K++++M  
Sbjct: 126 VAVRNIRRDANNDLKELLKEKEITEDEEHSAEDDVQKLTDTYVKKIDESLKAKEQDLMEV 185


>gi|255994878|ref|ZP_05428013.1| ribosome recycling factor [Eubacterium saphenum ATCC 49989]
 gi|255993591|gb|EEU03680.1| ribosome recycling factor [Eubacterium saphenum ATCC 49989]
          Length = 190

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 121/184 (65%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M ++ID  N K++   TIS L  ++ ++R GR +PS+LD ++V+ YG+  PL  +AN++V
Sbjct: 7   MKEIID--NFKEKGEKTISLLTGELNSVRAGRANPSLLDQIRVDYYGTPTPLKNIANISV 64

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +P+ L++S +D   +  + + I+ES LG+NP+ +G+ +R+ VP+ TEERR  + K+   
Sbjct: 65  PDPKSLMISPFDPSAIKEIIKAINESELGINPLDDGKNIRLKVPQLTEERRKEITKMVKQ 124

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             + +KI++RN+RRD  DHLKK+ K+G  SED +     DIQ  TD   K ID   +EK+
Sbjct: 125 ITDDAKIAIRNLRRDANDHLKKAEKNGDISEDELKGDTKDIQTKTDEFTKKIDGMLKEKE 184

Query: 181 KEIM 184
           KEIM
Sbjct: 185 KEIM 188


>gi|149183486|ref|ZP_01861915.1| ribosome recycling factor [Bacillus sp. SG-1]
 gi|148848798|gb|EDL63019.1| ribosome recycling factor [Bacillus sp. SG-1]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N K+RM   I    +++ ++R GR + S+LD + V+ YG+  P+NQ+A ++V E RML
Sbjct: 6   MSNTKERMTKAIQTFTRELASIRAGRANASLLDKITVDYYGAPTPVNQLAGISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +S+LG+ P  +G +LRI +P+ TEERR  LVK+    +E +K
Sbjct: 66  VIQPYDKSALGDIEKAIMKSDLGITPSSDGNILRIVIPQLTEERRKDLVKLVKKESEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD  D  KK  K+G  +ED +    +D+QK+TD  I  IDS  ++K+KEI+ 
Sbjct: 126 VAIRNIRRDANDEFKKLEKNGDITEDDLRGYSDDVQKLTDDHINQIDSIAKDKEKEILE 184


>gi|308068689|ref|YP_003870294.1| ribosome recycling factor (ribosome releasing factor)
           [Paenibacillus polymyxa E681]
 gi|305857968|gb|ADM69756.1| Ribosome recycling factor (Ribosome releasing factor)
           [Paenibacillus polymyxa E681]
          Length = 184

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 113/178 (63%), Gaps = 1/178 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM   I  L++D+ +LR GR +P++LD V+VE YG+  P+NQ+ANV   + R L+
Sbjct: 7   KSAEERMQKAIQALQRDLASLRAGRATPALLDRVQVEYYGAMTPVNQLANVNTPDSRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +A +ER I +S+LGL P  +G  +R+ +P  TEERR  LVK+     E++KI
Sbjct: 67  IQPWDKSSLADIERAIQKSDLGLTPSNDGNTIRLSIPALTEERRTDLVKLTKKNGEEAKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RNIRRD  D +KK  KS   SED     + DIQK TD  I  +D     K+KEIM 
Sbjct: 127 AIRNIRRDANDDIKKLEKSD-ISEDESRKHQEDIQKTTDKFIAEVDKVLAAKEKEIME 183


>gi|78045140|ref|YP_360604.1| ribosome recycling factor [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123575922|sp|Q3AB80|RRF_CARHZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|77997255|gb|ABB16154.1| ribosome recycling factor [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +D M   I  LKK+  T+R GR +P++L+ V VE YG+ +P+NQ+A ++  EPR+L
Sbjct: 6   LKEAQDHMQKAIEVLKKEFATMRVGRATPALLEKVVVEYYGTQMPVNQLATISAPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  + ++E+ I +S+LG+ P  +G V+R+ +P  T+ERR  LVKVA   AE+++
Sbjct: 66  VIQPWDKGALGAIEKAILKSDLGITPTNDGSVIRLAIPPLTQERRQELVKVARKKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D +K   K    SED     ++++QK+TD  IK +D   + K+ EI+  
Sbjct: 126 VAIRNIRRDANDRIKDLEKDKVISEDEGKRGQDEVQKLTDKFIKTVDELLKAKEDEILSI 185


>gi|304404282|ref|ZP_07385944.1| ribosome recycling factor [Paenibacillus curdlanolyticus YK9]
 gi|304347260|gb|EFM13092.1| ribosome recycling factor [Paenibacillus curdlanolyticus YK9]
          Length = 184

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 118/185 (63%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M Q I  ++ ++RM   I  LK+D+ TLR GR +P++LD ++VE YG+  P+NQ+AN+  
Sbjct: 1   MPQAIK-KDAEERMEKAIGALKRDLATLRAGRATPALLDRIQVEYYGAMTPVNQLANINT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L++  WDK  +A++E+ I +S+LGL P  +G  +R+ +P  TEERR  LVK+   
Sbjct: 60  PDSRTLLLQPWDKSSLAAIEKAIMKSDLGLTPSNDGSTIRLSIPALTEERRSELVKLTKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + E++KI+VRNIRRD  D +KK  K    SED     ++DIQK TD  +  +D     K+
Sbjct: 120 FGEEAKIAVRNIRRDANDDIKKLEKDA-ISEDESRRHQDDIQKTTDRFVGEVDKVLAAKE 178

Query: 181 KEIMH 185
           KEIM 
Sbjct: 179 KEIME 183


>gi|303247584|ref|ZP_07333855.1| ribosome recycling factor [Desulfovibrio fructosovorans JJ]
 gi|302491064|gb|EFL50958.1| ribosome recycling factor [Desulfovibrio fructosovorans JJ]
          Length = 184

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +DRM   ++ L K+   LRTGR + S+LD ++V+ YG+  PL+Q+A+V+  + R +
Sbjct: 5   LKDAEDRMQKALASLDKEFARLRTGRATTSLLDGIRVDYYGTPTPLDQMASVSTPDSRTI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ WD++    VE+ I +S+LGL P+ +G+++RI +P  TE+RR  L KVA  YAE++K
Sbjct: 65  TIAPWDRKAFHDVEKAILKSDLGLTPVNDGKIIRISIPPLTEDRRKDLAKVAKKYAEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D LKK +     SED     + D+QK+TD+ I   D    +K+KEIM  
Sbjct: 125 VAIRNIRRDANDALKKKKNDKAISEDDQHKGQEDVQKLTDAYIAKADDALAKKEKEIMEI 184


>gi|113461129|ref|YP_719197.1| ribosome recycling factor [Haemophilus somnus 129PT]
 gi|170717712|ref|YP_001784784.1| ribosome recycling factor [Haemophilus somnus 2336]
 gi|122945268|sp|Q0I379|RRF_HAES1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044058|sp|B0UUI5|RRF_HAES2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|112823172|gb|ABI25261.1| ribosome recycling factor [Haemophilus somnus 129PT]
 gi|168825841|gb|ACA31212.1| ribosome recycling factor [Haemophilus somnus 2336]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L+  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L 
Sbjct: 7   KDTQQRMEKSLETLRTHIAKIRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ KI
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     +++IQKITD+ +K +D    +K+KE++ F
Sbjct: 127 AIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDTFVKKVDEILADKEKELLDF 185


>gi|126699754|ref|YP_001088651.1| ribosome recycling factor [Clostridium difficile 630]
 gi|254975733|ref|ZP_05272205.1| ribosome recycling factor [Clostridium difficile QCD-66c26]
 gi|255093120|ref|ZP_05322598.1| ribosome recycling factor [Clostridium difficile CIP 107932]
 gi|255101273|ref|ZP_05330250.1| ribosome recycling factor [Clostridium difficile QCD-63q42]
 gi|255307149|ref|ZP_05351320.1| ribosome recycling factor [Clostridium difficile ATCC 43255]
 gi|255314862|ref|ZP_05356445.1| ribosome recycling factor [Clostridium difficile QCD-76w55]
 gi|255517536|ref|ZP_05385212.1| ribosome recycling factor [Clostridium difficile QCD-97b34]
 gi|255650647|ref|ZP_05397549.1| ribosome recycling factor [Clostridium difficile QCD-37x79]
 gi|260683737|ref|YP_003215022.1| ribosome recycling factor [Clostridium difficile CD196]
 gi|260687397|ref|YP_003218531.1| ribosome recycling factor [Clostridium difficile R20291]
 gi|306520574|ref|ZP_07406921.1| ribosome recycling factor [Clostridium difficile QCD-32g58]
 gi|122973796|sp|Q185S5|RRF_CLOD6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|115251191|emb|CAJ69022.1| Ribosome-recycling factor [Clostridium difficile]
 gi|260209900|emb|CBA63839.1| ribosome recycling factor [Clostridium difficile CD196]
 gi|260213414|emb|CBE05060.1| ribosome recycling factor [Clostridium difficile R20291]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 118/178 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++++M  TI  LK +  T+R GR +  MLD ++V+ YG+  P+NQ+  ++V EPR+L+
Sbjct: 7   KQLEEKMNGTIDALKFEFGTIRAGRANAQMLDKIRVDYYGTPTPINQIGAISVPEPRILM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S WDK  +  +E+ I  S+LGLNP  +G+V+R+ VP  TEERR  L K A   AE+ K+
Sbjct: 67  ISPWDKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAAEEFKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            +RN RRD  + +KK  K G+ +ED +   ++++QK+TD  IK ID+   +K+K+IM 
Sbjct: 127 RIRNERRDANEKIKKMEKGGELTEDELKKAQDEVQKMTDKFIKEIDTLLSKKEKDIME 184


>gi|71278867|ref|YP_268298.1| ribosome recycling factor [Colwellia psychrerythraea 34H]
 gi|123633168|sp|Q485G7|RRF_COLP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|71144607|gb|AAZ25080.1| ribosome recycling factor [Colwellia psychrerythraea 34H]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 81/180 (45%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ +DRMG +I  LK  +  +RTGR   S+LD + VE YG   PLNQV NV+V + R L
Sbjct: 6   IEDAQDRMGKSIEALKTSLTKIRTGRAHASLLDNIVVEYYGMDTPLNQVGNVSVPDARNL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++V+DK M+++VE+ I +S+LGLNP   G ++RIP+P  TEERR  LVKV    AE  K
Sbjct: 66  SITVFDKSMISAVEKAIMKSDLGLNPQSNGTLIRIPLPPLTEERRKDLVKVVRGEAEGGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD     K   K  + SED     E+ IQKITD  +K +D    +K+ E+M  
Sbjct: 126 VAIRNIRRDANSDFKSLLKEKEISEDDHHQAEDSIQKITDVFVKQVDEVLVKKEAELMEI 185


>gi|261253725|ref|ZP_05946298.1| ribosome recycling factor [Vibrio orientalis CIP 102891]
 gi|260937116|gb|EEX93105.1| ribosome recycling factor [Vibrio orientalis CIP 102891]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   QDAQERMEKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +K +D     K+KE+M  
Sbjct: 127 AIRNIRRDANGELKALLKDKEISEDEDRKGQDEIQKLTDAAVKQVDEVLAAKEKELMEV 185


>gi|169824406|ref|YP_001692017.1| ribosome recycling factor [Finegoldia magna ATCC 29328]
 gi|302380616|ref|ZP_07269081.1| ribosome recycling factor [Finegoldia magna ACS-171-V-Col3]
 gi|303233629|ref|ZP_07320283.1| ribosome recycling factor [Finegoldia magna BVS033A4]
 gi|238687737|sp|B0S187|RRF_FINM2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167831211|dbj|BAG08127.1| ribosome recycling factor [Finegoldia magna ATCC 29328]
 gi|302311559|gb|EFK93575.1| ribosome recycling factor [Finegoldia magna ACS-171-V-Col3]
 gi|302495063|gb|EFL54815.1| ribosome recycling factor [Finegoldia magna BVS033A4]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++++ +   T+  LK+++ T+R GR +PS+LD + VE YG+  PL QVA ++  E R+L
Sbjct: 6   LKDMETKADKTLHALKEELKTVRAGRANPSILDNIMVEYYGTSTPLKQVATISAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK ++  +E+ I  SNLG+ P  +G ++R+P P+ TE+RR  L KV   Y EKSK
Sbjct: 66  TIQPWDKSIMKEIEKQIQASNLGITPSNDGTIIRLPFPQLTEDRRKELTKVVKEYGEKSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD +D  KK  K+ + SED +  L +DIQ +TD   K ID+   +K+ E+M  
Sbjct: 126 VTIRSIRRDFVDDAKKMEKNAEISEDELHVLLDDIQSLTDKLTKEIDNIVTDKETELMEI 185


>gi|163941562|ref|YP_001646446.1| ribosome recycling factor [Bacillus weihenstephanensis KBAB4]
 gi|229013007|ref|ZP_04170172.1| Ribosome-recycling factor [Bacillus mycoides DSM 2048]
 gi|229061427|ref|ZP_04198772.1| Ribosome-recycling factor [Bacillus cereus AH603]
 gi|229134631|ref|ZP_04263441.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST196]
 gi|229168563|ref|ZP_04296286.1| Ribosome-recycling factor [Bacillus cereus AH621]
 gi|229174490|ref|ZP_04302022.1| Ribosome-recycling factor [Bacillus cereus MM3]
 gi|229564221|sp|A9VT62|RRF_BACWK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|163863759|gb|ABY44818.1| ribosome recycling factor [Bacillus weihenstephanensis KBAB4]
 gi|228609050|gb|EEK66340.1| Ribosome-recycling factor [Bacillus cereus MM3]
 gi|228614969|gb|EEK72071.1| Ribosome-recycling factor [Bacillus cereus AH621]
 gi|228648892|gb|EEL04917.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST196]
 gi|228717850|gb|EEL69498.1| Ribosome-recycling factor [Bacillus cereus AH603]
 gi|228748261|gb|EEL98121.1| Ribosome-recycling factor [Bacillus mycoides DSM 2048]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRASSSVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD  D LKK  K+G  +ED +     DIQK TD  I  +D   + K+KEIM 
Sbjct: 126 VAVRNVRRDSNDDLKKLEKAGDITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIME 184


>gi|163801782|ref|ZP_02195679.1| ribosome releasing factor [Vibrio sp. AND4]
 gi|159174290|gb|EDP59094.1| ribosome releasing factor [Vibrio sp. AND4]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLAKVRTGRAHPSLLSGISVEYYGASTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE +++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     +++IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANSDLKGLLKDKEISEDEDRKAQDEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|170723240|ref|YP_001750928.1| ribosome recycling factor [Pseudomonas putida W619]
 gi|229564262|sp|B1JBQ7|RRF_PSEPW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169761243|gb|ACA74559.1| ribosome recycling factor [Pseudomonas putida W619]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 117/177 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRMG +I  L +++ ++RTGR  PS+LD VKV A+GS +PLNQVA V+V + R L 
Sbjct: 7   KDAQDRMGKSIEALGRNLASIRTGRAHPSILDSVKVPAWGSEMPLNQVAAVSVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQASAVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD +  LKK  K  + SED      ++IQK+TD  +  ID+ F+ K+K+++
Sbjct: 127 AVRNVRRDALADLKKLTKDKEISEDEERRAADEIQKLTDKFVAEIDAAFKAKEKDLL 183


>gi|313115645|ref|ZP_07801101.1| ribosome recycling factor [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622031|gb|EFQ05530.1| ribosome recycling factor [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 184

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 115/174 (66%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +D+M  ++  L +++  +R GR +P++LD V V+ YG+  P+ QVA+V V E R L ++ 
Sbjct: 9   EDKMKSSVEHLGRELGAVRAGRANPAVLDKVSVDYYGAPTPIQQVASVAVAEARTLTITP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD+ ++  + + I  S++G+ PI +G  +R+  P  TEERR  L K      E++K++VR
Sbjct: 69  WDRTLLRPISKAIMASDVGITPIDDGSTIRLNFPAPTEERRKQLAKEVSKLGEEAKVAVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRR+ MD  K  +K+G+ +ED   ++E D+QK+TD  IKNID+  EEK+KEIM
Sbjct: 129 NIRREAMDKAKAMKKAGELTEDSQKTMEEDVQKLTDKYIKNIDAAVEEKQKEIM 182


>gi|156975503|ref|YP_001446410.1| ribosome recycling factor [Vibrio harveyi ATCC BAA-1116]
 gi|166231528|sp|A7MXZ7|RRF_VIBHB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|156527097|gb|ABU72183.1| hypothetical protein VIBHAR_03234 [Vibrio harveyi ATCC BAA-1116]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE S++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGSRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     +++IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANSDLKGLLKDKEISEDEDRKAQDEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|121594920|ref|YP_986816.1| ribosome recycling factor [Acidovorax sp. JS42]
 gi|222110429|ref|YP_002552693.1| ribosome recycling factor [Acidovorax ebreus TPSY]
 gi|166230405|sp|A1W915|RRF_ACISJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809509|sp|B9MGM0|RRF_DIAST RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120607000|gb|ABM42740.1| ribosome recycling factor [Acidovorax sp. JS42]
 gi|221729873|gb|ACM32693.1| ribosome recycling factor [Acidovorax ebreus TPSY]
          Length = 186

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I+  K ++  +RTGR +P +LD + VE YGS VPL+QVANV +L+ R + V  W+
Sbjct: 13  KMDQSIAAFKNNLAKIRTGRANPQLLDTIHVEYYGSMVPLSQVANVALLDARTISVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A +  E +K+++RN+
Sbjct: 73  KNMGAKIEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARSEGEGAKVAIRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  + +KK  K   ASED     E D+QK TD  I  ID+    K++EIM  
Sbjct: 133 RRDANEGVKKLVKDKLASEDDQKRAEADVQKTTDKHIAEIDALVAAKEQEIMAI 186


>gi|59712566|ref|YP_205342.1| ribosome recycling factor [Vibrio fischeri ES114]
 gi|71649417|sp|Q5E3E2|RRF_VIBF1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|59480667|gb|AAW86454.1| ribosome recycling factor [Vibrio fischeri ES114]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK +++ +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNNLLKIRTGRAHPSLLSGISVEYYGAQTPLNQVANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELAGLVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAENGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K  + SED     +++IQK+TD+ +K+ID     K+KE+M  
Sbjct: 127 AIRNIRRDANGDVKALLKEKEISEDDDRRAQDEIQKLTDAAVKSIDEVLAVKEKELMEV 185


>gi|227514718|ref|ZP_03944767.1| ribosome recycling factor [Lactobacillus fermentum ATCC 14931]
 gi|227086922|gb|EEI22234.1| ribosome recycling factor [Lactobacillus fermentum ATCC 14931]
          Length = 186

 Score =  156 bits (394), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M  +   LK+ +  +R GR + S+L+ V VE YG+  PLNQ+A++T+ E R L
Sbjct: 7   LAEAKEKMAKSGDALKRTLADIRAGRANASLLNTVTVEYYGAPTPLNQLASITIPEARQL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER I+ESNLGL P  +G+ +R+ VP+ TE+RR  LVK   A  EK+K
Sbjct: 67  LISPYDKTTLKDIERAIYESNLGLTPQNDGETIRLVVPQLTEDRRKELVKDVKAEMEKAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K G  ++D    LE  +Q+ TD+ IKN++    +K+KE++ 
Sbjct: 127 VAVRNVRREAMDDLKKGNKDGDFNDDEFHDLEKKVQEETDAGIKNLEQIAADKEKELLE 185


>gi|317493185|ref|ZP_07951608.1| ribosome recycling protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918845|gb|EFV40181.1| ribosome recycling protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 185

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/173 (44%), Positives = 113/173 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K ++  +RTGR  P++LD + VE YGS  PL QVANV   + R L ++V+D
Sbjct: 12  RMDKCVEAFKSNISKIRTGRAHPNLLDGISVEYYGSATPLRQVANVVAEDSRTLAITVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+K+  A AE+ ++SVRN+
Sbjct: 72  RSLSAAVEKAIMASDLGLNPMSAGAVIRVPLPALTEERRKDLIKLVRAEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD  D +K   K  + SED     ++++QK+TD  IK IDS   +K+KE+M 
Sbjct: 132 RRDANDKVKVLLKDKEISEDEDRKSQDEVQKMTDVMIKKIDSALADKEKELME 184


>gi|239826646|ref|YP_002949270.1| ribosome recycling factor [Geobacillus sp. WCH70]
 gi|259494544|sp|C5D9B8|RRF_GEOSW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|239806939|gb|ACS24004.1| ribosome recycling factor [Geobacillus sp. WCH70]
          Length = 185

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 117/175 (66%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M   +    +++ T+R GR +PS+L+ V V+ YG   P+ Q+A+++V E R+LV+  
Sbjct: 10  KEKMDKAVQAFTRELATIRAGRANPSLLEKVTVDYYGMPTPIIQLASISVPEARLLVIQP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  +E+ I  S+LGL P  +G V+RI +P  TEERR  LVK+   Y+E +K++VR
Sbjct: 70  YDKSVIKDIEKAILSSDLGLTPSNDGSVIRITIPPLTEERRRELVKLVKKYSEDAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD  D LKK  K+G+ +ED +    +D+QK+TD  I  ID+  +EK+KE+M 
Sbjct: 130 NIRRDANDELKKLEKNGEITEDELRGYTDDVQKLTDDHIAKIDAITKEKEKEVME 184


>gi|116495065|ref|YP_806799.1| ribosome recycling factor [Lactobacillus casei ATCC 334]
 gi|191638568|ref|YP_001987734.1| ribosome recycling factor [Lactobacillus casei BL23]
 gi|227534923|ref|ZP_03964972.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|122263518|sp|Q038L5|RRF_LACC3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238693049|sp|B3WES5|RRF_LACCB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116105215|gb|ABJ70357.1| ribosome recycling factor [Lactobacillus casei ATCC 334]
 gi|190712870|emb|CAQ66876.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Lactobacillus casei BL23]
 gi|227187679|gb|EEI67746.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|327382607|gb|AEA54083.1| Ribosome recycling factor, RRF [Lactobacillus casei LC2W]
 gi|327385804|gb|AEA57278.1| Ribosome recycling factor, RRF [Lactobacillus casei BD-II]
          Length = 185

 Score =  156 bits (394), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 118/185 (63%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQ+ID   +   MG T   L++++  +R GR + S+L+ + VE YG+  PLNQ+A +T+ 
Sbjct: 3   NQIIDQAKVN--MGKTEESLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPR+L VS +DK  + ++E  ++ S+LG+NP  +G V+R+ +P+ T ERR  + K    Y
Sbjct: 61  EPRVLQVSPYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKY 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +E +KI++RNIRR+G+D LK+  K G  +ED +  LE D+QK TD   K ID     K+K
Sbjct: 121 SESAKIAIRNIRREGLDKLKRQEKDGDITEDDLHRLEKDMQKATDDATKRIDEIAAAKEK 180

Query: 182 EIMHF 186
           EI   
Sbjct: 181 EITEV 185


>gi|242373550|ref|ZP_04819124.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           M23864:W1]
 gi|242348913|gb|EES40515.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           M23864:W1]
          Length = 184

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A+++V E R+L
Sbjct: 5   IKDTKARMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASISVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK  V  +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K
Sbjct: 65  VISPYDKTSVDDIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKDVKKIGEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  DHLKK  K+G  +ED + S  +D+QK TD++IK ID   ++K+K+IM  
Sbjct: 125 VSIRNIRRDINDHLKKQEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVDDKEKDIMSV 184


>gi|238763976|ref|ZP_04624932.1| Ribosome-recycling factor [Yersinia kristensenii ATCC 33638]
 gi|238697793|gb|EEP90554.1| Ribosome-recycling factor [Yersinia kristensenii ATCC 33638]
          Length = 185

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L ++V+D
Sbjct: 12  RMEKCLEAFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++S+RN+
Sbjct: 72  RSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     + DIQK+TD+ IK +D+    K+ E+M F
Sbjct: 132 RRDANDKVKALLKDKEISEDEDRRSQEDIQKLTDAFIKKVDAALAAKETELMDF 185


>gi|317153887|ref|YP_004121935.1| ribosome recycling factor [Desulfovibrio aespoeensis Aspo-2]
 gi|316944138|gb|ADU63189.1| ribosome recycling factor [Desulfovibrio aespoeensis Aspo-2]
          Length = 184

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K RM   IS L+KD   LRTGR + +++D + V+ YG+  P+NQ+++V+V + + +
Sbjct: 5   LNDGKKRMAGAISALEKDFSKLRTGRATTALVDTIVVDYYGTPTPINQLSSVSVPDAKSI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+    +VE+ I  S+LGLNP+ +G+++RI +P  TEERR  LVKVA  Y E+ K
Sbjct: 65  TIQPWDRGAFGAVEKAIQTSDLGLNPVNDGKIIRISIPPLTEERRKELVKVAKKYTEECK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RRD  D LKK  K    SED +   E D+QK+TD  +K  +     K+KEI+  
Sbjct: 125 IAIRNVRRDLNDSLKKLEKDKAISEDELKKGEADVQKLTDDFVKQSEGVLVAKEKEILEI 184


>gi|237745598|ref|ZP_04576078.1| ribosome recycling factor [Oxalobacter formigenes HOxBLS]
 gi|229376949|gb|EEO27040.1| ribosome recycling factor [Oxalobacter formigenes HOxBLS]
          Length = 186

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 115/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  ++  LK D+  +RTGR    +LD ++V+ YGS   ++QVANVT+L+ R + 
Sbjct: 8   KNAEQKMNKSVDSLKADLAKVRTGRAHTGILDHIQVDYYGSPTQISQVANVTLLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV+ +E+ I +S+LGLNP   G ++R+P P  TEERR  +VK+     E +K+
Sbjct: 68  VQPWEKKMVSVIEKAIRDSDLGLNPSSVGDIIRVPTPPLTEERRKEMVKLVKTEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD  + LKK  K    SED     ++DIQK+TD  ++ ID    EK+KE+M
Sbjct: 128 AVRNIRRDANEALKKMVKDKACSEDEERRAQDDIQKLTDRFVQQIDKLLTEKEKEVM 184


>gi|285018794|ref|YP_003376505.1| ribosome recycling factor (rrf) protein [Xanthomonas albilineans
           GPE PC73]
 gi|283474012|emb|CBA16513.1| probable ribosome recycling factor (rrf) protein [Xanthomonas
           albilineans]
          Length = 185

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 116/177 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  ++ +RTGR S ++++ +KV  YGS +PL+QVA+V V + R L 
Sbjct: 7   QDAQTRMAKSIDALRHTLIKVRTGRASTALVEHLKVNYYGSEMPLSQVASVAVADARSLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K+MV++VE+ I  S+LGL P   G  +R+ +P  TEERR  L KV H   E +K+
Sbjct: 67  ITPWEKQMVSAVEKAILASDLGLTPNTAGTTIRLNLPALTEERRRELSKVVHGEGEDTKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD   H+K   K  K +ED     E+DIQK+TD  IK++D   + K++E+M
Sbjct: 127 AIRNIRRDANQHIKDLLKDKKVTEDEARGSEDDIQKLTDKAIKDVDEVVKSKEQELM 183


>gi|323495359|ref|ZP_08100437.1| ribosome recycling factor [Vibrio brasiliensis LMG 20546]
 gi|323310430|gb|EGA63616.1| ribosome recycling factor [Vibrio brasiliensis LMG 20546]
          Length = 185

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   QDAQERMEKSVEALKNNLSKVRTGRAHPSLLAGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +K +D     K+KE+M  
Sbjct: 127 AIRNIRRDANGELKALLKDKEISEDEDRKGQDEIQKLTDAAVKQVDEVLAAKEKELMEV 185


>gi|310641584|ref|YP_003946342.1| ribosome-recycling factor [Paenibacillus polymyxa SC2]
 gi|309246534|gb|ADO56101.1| Ribosome-recycling factor [Paenibacillus polymyxa SC2]
          Length = 184

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 113/178 (63%), Gaps = 1/178 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM   I  L++D+ +LR GR +P++LD V+VE YG+  P+NQ+AN+   + R L+
Sbjct: 7   KSAEERMQKAIQALQRDLSSLRAGRATPALLDRVQVEYYGAMTPVNQLANINTPDSRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +A +ER I +S+LGL P  +G  +R+ +P  TEERR  LVK+     E++KI
Sbjct: 67  IQPWDKSSLADIERAIQKSDLGLTPSNDGNTIRLSIPALTEERRTDLVKLTKKSGEEAKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RNIRRD  D +KK  KS   SED     + DIQK TD  I  +D     K+KEIM 
Sbjct: 127 AIRNIRRDANDDIKKMEKSD-ISEDESRKHQEDIQKTTDKFIAEVDKVLAAKEKEIME 183


>gi|257464022|ref|ZP_05628407.1| ribosome recycling factor (RRF) [Fusobacterium sp. D12]
 gi|317061543|ref|ZP_07926028.1| ribosome recycling factor [Fusobacterium sp. D12]
 gi|313687219|gb|EFS24054.1| ribosome recycling factor [Fusobacterium sp. D12]
          Length = 189

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 117/180 (65%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +M  T+   K+   ++R GR S +MLD +KVE YGS +PLNQVA V+  E R+L
Sbjct: 8   IQECESKMKKTVEATKEKFTSIRAGRASVAMLDTIKVEQYGSEMPLNQVATVSAPEARLL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M+  +E+ I  +NLG+NP  +G+V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 68  VIDPWDKTMIPKIEKAILAANLGMNPNNDGRVVRLVMPELTAERRKEYVKLAKKEAENGK 127

Query: 127 ISVRNIRRD---GMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D    +  ++K ++SG  SED +   E ++Q +TD TIK +D    +K+KEI
Sbjct: 128 IAVRNIRKDMNTALKKIEKDKESG-MSEDELKRFEAEVQTLTDKTIKELDELLAKKEKEI 186


>gi|312883811|ref|ZP_07743530.1| ribosome recycling factor [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368560|gb|EFP96093.1| ribosome recycling factor [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 185

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   QDAQERMEKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +K +D     K+KE+M  
Sbjct: 127 AIRNIRRDANGDLKALLKEKEISEDEDRKGQDEIQKLTDAAVKQVDEVLAAKEKELMEV 185


>gi|209695848|ref|YP_002263778.1| ribosome recycling factor [Aliivibrio salmonicida LFI1238]
 gi|226749946|sp|B6EK54|RRF_ALISL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|208009801|emb|CAQ80108.1| ribosome recycling factor [Aliivibrio salmonicida LFI1238]
          Length = 185

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK +++ +RTGR  PS+L  + VE YG+  P+NQVAN+   + R L 
Sbjct: 7   KDAQERMEKSVEALKNNLLKIRTGRAHPSLLSGLSVEYYGARTPINQVANIIAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR +LVK+    AE  ++
Sbjct: 67  ITVFDKELAGLVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRKSLVKIVRGEAENGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    +K   K  + SED     +++IQK+TD  +KNID     K+KE+M  
Sbjct: 127 AVRNIRRDANGDIKALLKDKEISEDDDRRTQDEIQKLTDIAVKNIDDVLAVKEKELMEV 185


>gi|319786511|ref|YP_004145986.1| ribosome recycling factor [Pseudoxanthomonas suwonensis 11-1]
 gi|317465023|gb|ADV26755.1| ribosome recycling factor [Pseudoxanthomonas suwonensis 11-1]
          Length = 185

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 115/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+ +++ +RTGR S  ++D ++V AYGS VPL+QVA V+V + R LV
Sbjct: 7   QDAQARMAKSIEALRHNLVKVRTGRASTGLVDTIRVSAYGSDVPLSQVAAVSVSDARSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WDK MV  +E+ I  S+LGL P   G  +R+ +P  TEERR  L KV  +  E +K+
Sbjct: 67  ITPWDKSMVGPIEKAILASDLGLTPNTAGTTIRLNLPALTEERRRDLAKVVASEGEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD    +K   K  + +ED V   E+DIQKITD  IK++D   + K++E+M
Sbjct: 127 AIRNVRRDANQQVKDLLKEKQVTEDDVRRAEDDIQKITDKAIKDVDEVVKAKEQELM 183


>gi|295399842|ref|ZP_06809823.1| ribosome recycling factor [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111646|ref|YP_003989962.1| ribosome recycling factor [Geobacillus sp. Y4.1MC1]
 gi|294978245|gb|EFG53842.1| ribosome recycling factor [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216747|gb|ADP75351.1| ribosome recycling factor [Geobacillus sp. Y4.1MC1]
          Length = 185

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 118/175 (67%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M   +    +++ T+R GR +PS+L+ + V+ YG+  P+ Q+A+++  E R+LV+  
Sbjct: 10  KEKMDKAVQAFTRELATIRAGRANPSLLEKITVDYYGAPTPIIQLASISAPEARLLVIQP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  +E+ I  S+LGL P  +G V+RI +P  TEERR  LVK+   Y+E +K++VR
Sbjct: 70  YDKSVIKDIEKAILSSDLGLTPSNDGSVIRIAIPPLTEERRRELVKLVKKYSEDAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD  D LKK  K+G+ +ED +    +DIQK+TD+ I  ID+  +EK+KE+M 
Sbjct: 130 NIRRDANDELKKLEKNGEITEDELRGYIDDIQKLTDNHIAKIDTITKEKEKEVME 184


>gi|242242542|ref|ZP_04796987.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           W23144]
 gi|242233969|gb|EES36281.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           W23144]
 gi|319401451|gb|EFV89661.1| ribosome recycling factor [Staphylococcus epidermidis FRI909]
          Length = 184

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+L
Sbjct: 5   IKDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K
Sbjct: 65  VISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKKIGEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD++IK+ID    +K+K+IM  
Sbjct: 125 VSIRNIRRDINDQLKKDEKNGDITEDDLRSQTDDVQKATDNSIKDIDQLVADKEKDIMSV 184


>gi|319649531|ref|ZP_08003687.1| ribosome recycling factor [Bacillus sp. 2_A_57_CT2]
 gi|317398693|gb|EFV79375.1| ribosome recycling factor [Bacillus sp. 2_A_57_CT2]
          Length = 185

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 120/178 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + K+RM   IS   +++ ++R G+ + S+LD + V+ YG+  P+NQ+A V+  E R+L
Sbjct: 6   IADAKERMTKAISAYTRELASIRAGKANASLLDRITVDYYGAPTPVNQLAGVSAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK ++  +E+ I +S++GLNP  +G V+R+ +P+ TEERR  LVKV    +E +K
Sbjct: 66  VITPYDKSILGEIEKAILKSDIGLNPSNDGSVIRLAIPQLTEERRKDLVKVVKKESEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+RRD  D LKK  K+G  +ED +    +DIQK+TD  I  ID   +EK+KEI+
Sbjct: 126 VAIRNVRRDANDDLKKLEKNGDITEDDLRGFSDDIQKLTDDHISKIDELTKEKEKEIL 183


>gi|319940997|ref|ZP_08015334.1| ribosome-recycling factor [Sutterella wadsworthensis 3_1_45B]
 gi|319805570|gb|EFW02365.1| ribosome-recycling factor [Sutterella wadsworthensis 3_1_45B]
          Length = 186

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 107/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +MG T+  L+ D   +RTGR S  +LD ++V+ YG   PLNQVA V V +   L
Sbjct: 7   IQQTQHKMGVTVEKLRDDFTRIRTGRASTGLLDKIRVDYYGCPTPLNQVAQVGVGDAHTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  W+K MV   E+ I +S+LGLNP   G  +R+P+P  TEERR  L KV   + E++K
Sbjct: 67  TVQPWEKNMVKVCEKAIRDSDLGLNPATSGDTIRVPLPPLTEERRRELTKVVKGFGEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RRD    L++  K  + SED     E +IQK+TD  +  ID    EK KEIM
Sbjct: 127 VAVRNLRRDANTQLERLEKDKEISEDDQRRYETEIQKLTDRFVAEIDKVIAEKDKEIM 184


>gi|227904185|ref|ZP_04021990.1| ribosome recycling factor [Lactobacillus acidophilus ATCC 4796]
 gi|227868204|gb|EEJ75625.1| ribosome recycling factor [Lactobacillus acidophilus ATCC 4796]
          Length = 185

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D MG +I   +K + ++R G  + ++LD V+VE YG+  PL Q+++VT+ EPR+L
Sbjct: 6   IKKAQDNMGKSIKVYQKKLASVRAGVANAALLDNVQVEYYGAPTPLTQMSSVTIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTSERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RR+ MD LKK  K+G  +ED   +LE  +QK+TD   K ID   +EK+KEI  
Sbjct: 126 IAVRNVRREAMDSLKKEEKNGDITEDEQRNLEKQVQKVTDDATKKIDQLADEKRKEITQ 184


>gi|51245009|ref|YP_064893.1| ribosome recycling factor [Desulfotalea psychrophila LSv54]
 gi|60390247|sp|Q6AP38|RRF_DESPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|50876046|emb|CAG35886.1| probable ribosome recycling factor [Desulfotalea psychrophila
           LSv54]
          Length = 184

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 115/173 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++   K D+  +RTGR S S+LD + V AYGS +PLNQVA +T+ E RM+ +  WD
Sbjct: 11  RMAKSVEAFKNDLSRVRTGRASISILDDITVVAYGSTMPLNQVATLTIPESRMIALQPWD 70

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            +M+  +E+ I +S LGLNP+ +G+V+R+ +P+ TE+RR  LVK     AE+ ++++RN+
Sbjct: 71  PQMIPPIEKAILKSGLGLNPVNDGKVVRLNIPQLTEDRRKDLVKQVKKIAEEFRVAIRNV 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD +D LK  +K  + SED +  L++D QK TD  IK +D     K+KE+M 
Sbjct: 131 RRDAIDTLKLQKKDKEISEDDLFKLQDDAQKETDIYIKQLDEVSASKEKEVME 183


>gi|257439607|ref|ZP_05615362.1| ribosome recycling factor [Faecalibacterium prausnitzii A2-165]
 gi|257197974|gb|EEU96258.1| ribosome recycling factor [Faecalibacterium prausnitzii A2-165]
          Length = 184

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 116/175 (66%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            +++M  ++  L +++  +R GR +P++LD V V+ YG+  P+ QVA+V V E R L ++
Sbjct: 8   FEEKMKSSVEHLDRELAAVRAGRANPAVLDKVSVDYYGAPTPIQQVASVAVSEARTLTIT 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WD+ ++ ++ + I  S++G+ PI +G  +R+  P  TEERR  L K      E++K++V
Sbjct: 68  PWDRTLLRAISKAIMASDVGITPIDDGSTIRLNFPAPTEERRKQLAKEVAKLGEEAKVAV 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RN+RRD MD  K  +K+G+ +ED   ++E ++QK+TD  IKNID+  EEK+KEIM
Sbjct: 128 RNVRRDAMDKAKAMKKAGELTEDTQKTMEEEVQKLTDKYIKNIDAAVEEKQKEIM 182


>gi|261407947|ref|YP_003244188.1| ribosome recycling factor [Paenibacillus sp. Y412MC10]
 gi|329929321|ref|ZP_08283074.1| ribosome recycling factor [Paenibacillus sp. HGF5]
 gi|261284410|gb|ACX66381.1| ribosome recycling factor [Paenibacillus sp. Y412MC10]
 gi|328936690|gb|EGG33133.1| ribosome recycling factor [Paenibacillus sp. HGF5]
          Length = 184

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 114/178 (64%), Gaps = 1/178 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N ++RM   I  LK+D+ TLR GR +P++LD + VE YG+  PLNQ+AN++  + R L+
Sbjct: 7   KNAEERMEKAILSLKRDLATLRAGRAAPALLDRITVEYYGAQTPLNQLANISTPDSRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +A +E+ I +S++GL P  +G  +R+ VP  TEERR  LVK+   + E++K+
Sbjct: 67  IQPWDKSSLADIEKAIMKSDIGLTPANDGNQIRLVVPALTEERRTELVKMTKKFGEEAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RNIRRD  D +KK  K+   SED     + DIQK TD  I  +D     K+KEIM 
Sbjct: 127 AIRNIRRDANDDIKKLEKTD-ISEDESRRHQEDIQKATDKFIAEVDKVLVAKEKEIME 183


>gi|197335484|ref|YP_002156787.1| ribosome recycling factor [Vibrio fischeri MJ11]
 gi|226749945|sp|B5F9X3|RRF_VIBFM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|197316974|gb|ACH66421.1| ribosome recycling factor [Vibrio fischeri MJ11]
          Length = 185

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK +++ +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNNLLKVRTGRAHPSLLSGISVEYYGAKTPLNQVANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELAGLVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAENGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    +K   K  + SED     +++IQK+TD+ +K+ID     K+KE+M  
Sbjct: 127 AVRNIRRDANGDVKALLKEKEISEDDDRRAQDEIQKLTDAAVKSIDEVLAVKEKELMEV 185


>gi|255656125|ref|ZP_05401534.1| ribosome recycling factor [Clostridium difficile QCD-23m63]
 gi|296450443|ref|ZP_06892199.1| ribosome recycling factor [Clostridium difficile NAP08]
 gi|296879434|ref|ZP_06903428.1| ribosome recycling factor [Clostridium difficile NAP07]
 gi|296260704|gb|EFH07543.1| ribosome recycling factor [Clostridium difficile NAP08]
 gi|296429580|gb|EFH15433.1| ribosome recycling factor [Clostridium difficile NAP07]
          Length = 185

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 117/178 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++++M  TI  LK +  T+R GR +  MLD ++V+ YG+  P+NQ+  ++V EPR+L+
Sbjct: 7   KQLEEKMNGTIDALKFEFGTIRAGRANAQMLDKIRVDYYGTPTPINQIGAISVPEPRILM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S WDK  +  +E+ I  S+LGLNP  +G+V+R+ VP  TEERR  L K A   AE  K+
Sbjct: 67  ISPWDKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAAEDFKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            +RN RRD  + +KK  K G+ +ED +   ++++QK+TD  IK ID+   +K+K+IM 
Sbjct: 127 RIRNERRDANEKIKKMEKGGELTEDELKKAQDEVQKMTDKFIKEIDTLLSKKEKDIME 184


>gi|241896312|ref|ZP_04783608.1| ribosome recycling factor [Weissella paramesenteroides ATCC 33313]
 gi|241870473|gb|EER74224.1| ribosome recycling factor [Weissella paramesenteroides ATCC 33313]
          Length = 185

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 120/178 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K+RM      L++++  +R G  +PS+L  + VE YG+  PLNQ+A+VTV E R+L
Sbjct: 6   IESAKERMSKAGDALRRELGNIRAGVANPSILRNITVEYYGAETPLNQLASVTVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I  S+LGL P  +G V+R+ +P  TEE R  L K   A +EK+K
Sbjct: 66  LITPFDKSVLKGIEQSIFASDLGLTPANDGSVIRLVIPALTEETRKDLAKEVKAESEKAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RRD MD  KK+ K+   SED   ++E+DIQK TD+ IKN+D    EK+KE++
Sbjct: 126 VAVRNVRRDAMDDAKKALKNNDLSEDEAHNIEDDIQKATDAAIKNVDEIAAEKEKELL 183


>gi|300780937|ref|ZP_07090791.1| ribosome recycling factor [Corynebacterium genitalium ATCC 33030]
 gi|300532644|gb|EFK53705.1| ribosome recycling factor [Corynebacterium genitalium ATCC 33030]
          Length = 185

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM +++   + +++T+RTGR +P+M + V  E YG+  P+NQ+A ++V EPRML
Sbjct: 6   LLDAEERMTNSVEHTRGELVTIRTGRANPAMFNSVMAEFYGAPTPINQMATISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +  +E  I  S+LG+NP  +GQV+R+ +P+ TEERR  LVK A    E  K
Sbjct: 66  LIKPYDPSTMGEIENAIRNSDLGVNPTDDGQVIRVTIPQLTEERRRDLVKQAKGKGEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RN+RR GMD LKK +K G A ED V++ E ++ K T   +  ID    +K+ E++ 
Sbjct: 126 IAIRNVRRSGMDALKKIQKDGDAGEDEVSAAEKELDKTTAKYVDMIDDLVNKKEAELLE 184


>gi|326693032|ref|ZP_08230037.1| ribosome recycling factor [Leuconostoc argentinum KCTC 3773]
          Length = 181

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 122/183 (66%), Gaps = 3/183 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
             D+ + K RM      L++++ ++RTGR +P +LD ++VE YG+  PLNQVA+++V E 
Sbjct: 2   AFDITDAKARMQGAQDALQRELGSIRTGRANPRILDRIEVEYYGAMTPLNQVASISVPEA 61

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R+L+++ +DK ++  + R I+ S+LGLNP  +G ++R+ +P+ TEE R  L K   A AE
Sbjct: 62  RILLITPFDKSVLDEIIRAINMSDLGLNPASDGNIVRLAIPQMTEEGRKELAKQVKAEAE 121

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K+K+SVRN+RRD MD +KK +   +  ED+    E+ IQK+TD  IK ID+   EK+KE+
Sbjct: 122 KAKVSVRNVRRDAMDSVKKDK---ELPEDVARKAEDAIQKLTDDNIKAIDAIAAEKEKEL 178

Query: 184 MHF 186
           +  
Sbjct: 179 LTI 181


>gi|22127009|ref|NP_670432.1| ribosome recycling factor [Yersinia pestis KIM 10]
 gi|45442572|ref|NP_994111.1| ribosome recycling factor [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597315|ref|YP_071506.1| ribosome recycling factor [Yersinia pseudotuberculosis IP 32953]
 gi|108806520|ref|YP_650436.1| ribosome recycling factor [Yersinia pestis Antiqua]
 gi|108813113|ref|YP_648880.1| ribosome recycling factor [Yersinia pestis Nepal516]
 gi|145598947|ref|YP_001163023.1| ribosome recycling factor [Yersinia pestis Pestoides F]
 gi|149366952|ref|ZP_01888985.1| ribosome recycling factor [Yersinia pestis CA88-4125]
 gi|153949227|ref|YP_001400000.1| ribosome recycling factor [Yersinia pseudotuberculosis IP 31758]
 gi|162420181|ref|YP_001607769.1| ribosome recycling factor [Yersinia pestis Angola]
 gi|165927071|ref|ZP_02222903.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939820|ref|ZP_02228360.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011931|ref|ZP_02232829.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211643|ref|ZP_02237678.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399872|ref|ZP_02305390.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419665|ref|ZP_02311418.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425236|ref|ZP_02316989.1| ribosome recycling factor [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470429|ref|ZP_02335133.1| ribosome recycling factor [Yersinia pestis FV-1]
 gi|170023318|ref|YP_001719823.1| ribosome recycling factor [Yersinia pseudotuberculosis YPIII]
 gi|186896420|ref|YP_001873532.1| ribosome recycling factor [Yersinia pseudotuberculosis PB1/+]
 gi|218928215|ref|YP_002346090.1| ribosome recycling factor [Yersinia pestis CO92]
 gi|229837754|ref|ZP_04457914.1| ribosome recycling factor [Yersinia pestis Pestoides A]
 gi|229840976|ref|ZP_04461135.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843077|ref|ZP_04463227.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903556|ref|ZP_04518669.1| ribosome recycling factor [Yersinia pestis Nepal516]
 gi|270487337|ref|ZP_06204411.1| ribosome recycling factor [Yersinia pestis KIM D27]
 gi|294503064|ref|YP_003567126.1| ribosome releasing factor [Yersinia pestis Z176003]
 gi|22001943|sp|Q8ZH63|RRF_YERPE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390683|sp|Q667J2|RRF_YERPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123073218|sp|Q1CFF0|RRF_YERPN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123372696|sp|Q1CAN1|RRF_YERPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231530|sp|A4TL88|RRF_YERPP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166991561|sp|A7FFH2|RRF_YERP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238687287|sp|A9R393|RRF_YERPG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238688487|sp|B1JQG3|RRF_YERPY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238691338|sp|B2JZ31|RRF_YERPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21960056|gb|AAM86683.1|AE013914_3 ribosome releasing factor [Yersinia pestis KIM 10]
 gi|45437437|gb|AAS62988.1| ribosome recycling factor [Yersinia pestis biovar Microtus str.
           91001]
 gi|51590597|emb|CAH22238.1| ribosome recycling factor [Yersinia pseudotuberculosis IP 32953]
 gi|108776761|gb|ABG19280.1| ribosome recycling factor [Yersinia pestis Nepal516]
 gi|108778433|gb|ABG12491.1| ribosome recycling factor [Yersinia pestis Antiqua]
 gi|115346826|emb|CAL19712.1| ribosome recycling factor [Yersinia pestis CO92]
 gi|145210643|gb|ABP40050.1| ribosome recycling factor [Yersinia pestis Pestoides F]
 gi|149290566|gb|EDM40642.1| ribosome recycling factor [Yersinia pestis CA88-4125]
 gi|152960722|gb|ABS48183.1| ribosome recycling factor [Yersinia pseudotuberculosis IP 31758]
 gi|162352996|gb|ABX86944.1| ribosome recycling factor [Yersinia pestis Angola]
 gi|165912223|gb|EDR30860.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920967|gb|EDR38191.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989197|gb|EDR41498.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207414|gb|EDR51894.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962406|gb|EDR58427.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050580|gb|EDR61988.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055636|gb|EDR65420.1| ribosome recycling factor [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169749852|gb|ACA67370.1| ribosome recycling factor [Yersinia pseudotuberculosis YPIII]
 gi|186699446|gb|ACC90075.1| ribosome recycling factor [Yersinia pseudotuberculosis PB1/+]
 gi|229679326|gb|EEO75429.1| ribosome recycling factor [Yersinia pestis Nepal516]
 gi|229689953|gb|EEO82012.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697342|gb|EEO87389.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704131|gb|EEO91143.1| ribosome recycling factor [Yersinia pestis Pestoides A]
 gi|262361101|gb|ACY57822.1| ribosome releasing factor [Yersinia pestis D106004]
 gi|262365342|gb|ACY61899.1| ribosome releasing factor [Yersinia pestis D182038]
 gi|270335841|gb|EFA46618.1| ribosome recycling factor [Yersinia pestis KIM D27]
 gi|294353523|gb|ADE63864.1| ribosome releasing factor [Yersinia pestis Z176003]
 gi|320014181|gb|ADV97752.1| ribosome recycling factor [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 185

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 114/174 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L ++V+D
Sbjct: 12  RMEKCLEAFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++S+RN+
Sbjct: 72  RSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+    K+ E+M F
Sbjct: 132 RRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKKVDAALAVKEAELMDF 185


>gi|315633607|ref|ZP_07888897.1| ribosome recycling factor [Aggregatibacter segnis ATCC 33393]
 gi|315477649|gb|EFU68391.1| ribosome recycling factor [Aggregatibacter segnis ATCC 33393]
          Length = 185

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++V+ YGS  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSLEALKGHIAKIRTGRAQPSLLDAIQVDYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  +  E+ K+
Sbjct: 67  VTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKSEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E +IQ+ITD  IK +D    EK+KE++ F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENDQHKAETEIQQITDKFIKKVDEVLAEKEKELLDF 185


>gi|83816107|ref|YP_444188.1| ribosome recycling factor [Salinibacter ruber DSM 13855]
 gi|294505846|ref|YP_003569904.1| Ribosome recycling factor [Salinibacter ruber M8]
 gi|123529892|sp|Q2S6J3|RRF_SALRD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|83757501|gb|ABC45614.1| ribosome recycling factor [Salinibacter ruber DSM 13855]
 gi|294342174|emb|CBH22952.1| Ribosome recycling factor [Salinibacter ruber M8]
          Length = 189

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 121/178 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    + M +++S+++ ++ T+R GR SP+ML+ V VE YGS  PL QVA+V+  +P ++
Sbjct: 10  LDEADEEMEESVSYMRSELRTIRAGRASPAMLENVTVEYYGSQTPLEQVASVSAPQPDLI 69

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +D+  + ++ERGI +++LGLNP  +G+ +RIP+P  +EERR  LV+ +   AE++K
Sbjct: 70  VVQPFDRNAIENIERGIMKADLGLNPNNDGEKIRIPIPPLSEERRKELVETSRERAEETK 129

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IS+RNIRRD  + ++   ++   SED++   E D+Q ITD+  + ++   E+K ++IM
Sbjct: 130 ISIRNIRRDAKNEIQNVVEAENFSEDVLYGAEEDLQDITDAHTETVEGLLEQKTEQIM 187


>gi|328957401|ref|YP_004374787.1| ribosome recycling factor [Carnobacterium sp. 17-4]
 gi|328673725|gb|AEB29771.1| ribosome recycling factor [Carnobacterium sp. 17-4]
          Length = 185

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 125/178 (70%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+ +K++M  T   L++++ T+R GR +  +LD + V  YG+  PL Q+A +++ EPR+L
Sbjct: 6   LETMKEKMVKTEGALQRELGTIRAGRANAGLLDRINVVYYGAPTPLKQLAQISIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  ++ +E+ I +S+LG++P  +G V+R+ +P+ TEERR  L K     AE +K
Sbjct: 66  MVTPFDKTSISDIEKAIMQSDLGISPANDGNVIRLVIPQLTEERRKELAKKVGKEAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRNIRR+ +D LKK+ K+ + ++D + + E DIQKIT++++KNID    +K+KE++
Sbjct: 126 VSVRNIRREAIDELKKAEKNNEITQDDLRTFEEDIQKITNTSVKNIDGIAADKEKELL 183


>gi|226327052|ref|ZP_03802570.1| hypothetical protein PROPEN_00913 [Proteus penneri ATCC 35198]
 gi|225204270|gb|EEG86624.1| hypothetical protein PROPEN_00913 [Proteus penneri ATCC 35198]
          Length = 202

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/180 (44%), Positives = 116/180 (64%), Gaps = 1/180 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMT-LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ ++RM  ++  LKK  +  +RTGR SPS+LD + VE YG+  PLNQVANV   + R L
Sbjct: 23  KDAQERMDKSVEALKKSQINKVRTGRASPSLLDGIVVEYYGAPTPLNQVANVVAEDGRTL 82

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++V+D+ +  +VE+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ +
Sbjct: 83  AITVFDRTLAPAVEKAIMASDLGLNPSSAGAIIRVPLPPLTEERRKDLIKVVRGDAEQGR 142

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D +K   K  + SED     ++DIQK+TD  IK ID     K+ E+M F
Sbjct: 143 VSIRNIRRDANDKVKALLKDKEISEDDERRSQDDIQKLTDMFIKKIDDALALKEAELMEF 202


>gi|269960594|ref|ZP_06174966.1| Ribosome-recycling factor [Vibrio harveyi 1DA3]
 gi|269834671|gb|EEZ88758.1| Ribosome-recycling factor [Vibrio harveyi 1DA3]
          Length = 185

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE +++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     +++IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANSDLKGLLKDKEISEDEDRKAQDEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|54297625|ref|YP_123994.1| ribosome recycling factor [Legionella pneumophila str. Paris]
 gi|60390234|sp|Q5X4K0|RRF_LEGPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|53751410|emb|CAH12828.1| Ribosome recycling factor [Legionella pneumophila str. Paris]
          Length = 185

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  TI  L  DM  +RTGR + S+LD V V+ YGS  PL+QVAN+T  + R ++
Sbjct: 7   QDSEKRMKKTIEALHSDMSKIRTGRANASLLDHVMVDYYGSPTPLSQVANITTSDSRTIL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K MVA++E+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV     E+ ++
Sbjct: 67  VTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  + LK+  K    SED        IQK+TD  I  +D+   EK+K++M  
Sbjct: 127 SIRNIRRDANNQLKELVKEKAISEDDERRAAEAIQKLTDRYISEVDAVLAEKEKDLMEI 185


>gi|28899089|ref|NP_798694.1| ribosome recycling factor [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839719|ref|ZP_01992386.1| ribosome recycling factor [Vibrio parahaemolyticus AQ3810]
 gi|260876829|ref|ZP_05889184.1| ribosome recycling factor [Vibrio parahaemolyticus AN-5034]
 gi|31076875|sp|Q8GRF5|RRF_VIBPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33357058|pdb|1IS1|A Chain A, Crystal Structure Of Ribosome Recycling Factor From Vibrio
           Parahaemolyticus
 gi|23491649|dbj|BAC16794.1| ribosome recycling factor [Vibrio parahaemolyticus]
 gi|28807313|dbj|BAC60578.1| ribosome recycling factor [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746755|gb|EDM57743.1| ribosome recycling factor [Vibrio parahaemolyticus AQ3810]
 gi|308091503|gb|EFO41198.1| ribosome recycling factor [Vibrio parahaemolyticus AN-5034]
 gi|328474374|gb|EGF45179.1| ribosome recycling factor [Vibrio parahaemolyticus 10329]
          Length = 185

 Score =  155 bits (392), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAATPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + +IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|260897261|ref|ZP_05905757.1| ribosome recycling factor [Vibrio parahaemolyticus Peru-466]
 gi|308085361|gb|EFO35056.1| ribosome recycling factor [Vibrio parahaemolyticus Peru-466]
          Length = 180

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 2   KDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAATPLNQVANVVAEDARTLA 61

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 62  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 121

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + +IQK+TD  +K ID     K+KE+M  
Sbjct: 122 AVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKELMEV 180


>gi|118443357|ref|YP_878219.1| ribosome recycling factor [Clostridium novyi NT]
 gi|166230781|sp|A0Q0R7|RRF_CLONN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118133813|gb|ABK60857.1| ribosome recycling factor [Clostridium novyi NT]
          Length = 185

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  +IS LKKD+ +++ G+ +P+MLD V VE YGS  P+NQ+ANV+  EPR+L
Sbjct: 6   LNKSEEKMLKSISVLKKDLGSMKAGKANPAMLDRVNVEYYGSETPINQLANVSSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  +  +E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E+SK
Sbjct: 66  LIQPWDKNSLKDIEKAILQSDLGLNPSNDGSVIRLIIPELTEETRKDIVKKVKKIGEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++R+IRR+G D +K  +K+   +ED     E+ +QKITD  I  ID+    K+KE+M  
Sbjct: 126 IAIRSIRREGNDKIKNLKKNNDITEDEAKEGESSVQKITDKYITEIDNIVSAKEKEVMSV 185


>gi|19553226|ref|NP_601228.1| ribosome recycling factor [Corynebacterium glutamicum ATCC 13032]
 gi|62390862|ref|YP_226264.1| ribosome recycling factor [Corynebacterium glutamicum ATCC 13032]
 gi|24418653|sp|Q8NP03|RRF_CORGL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21324793|dbj|BAB99416.1| Ribosome recycling factor [Corynebacterium glutamicum ATCC 13032]
 gi|41326201|emb|CAF20363.1| RIBOSOME RECYCLING FACTOR [Corynebacterium glutamicum ATCC 13032]
          Length = 185

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 112/175 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM  T+   ++D+ T+RTGR +P+M + V  E YG   P+ Q++ +TV EPRML++  
Sbjct: 10  EERMTATVEHTREDLTTIRTGRANPAMFNGVMAEYYGVPTPITQMSGITVPEPRMLLIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++   +  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A    E  KI++R
Sbjct: 70  YEMSSMQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDMVKLAKGKGEDGKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR GMD LKK +K G A ED V + E ++ K+T   +  +D     K+KE+M 
Sbjct: 130 NIRRKGMDQLKKLQKDGDAGEDEVQAAEKELDKVTAGFVAQVDEVVARKEKELME 184


>gi|212695690|ref|ZP_03303818.1| hypothetical protein ANHYDRO_00207 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677363|gb|EEB36970.1| hypothetical protein ANHYDRO_00207 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 185

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 103/158 (65%)

Query: 28  LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           +R GR + S+LD +    YGS  P+NQ A ++  EPR+LV+  WDK  +  +E+ I++S+
Sbjct: 27  IRAGRANDSILDGLTFSYYGSQTPINQAATISTPEPRLLVIKPWDKSNIKEIEKAINKSD 86

Query: 88  LGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSG 147
           +G+NP  +G+V+R+P P  TEERR  L K  + Y+E SKI +RNIRRD +D  KK  KS 
Sbjct: 87  IGINPQNDGEVIRLPFPALTEERRKDLTKQVNEYSEDSKIQIRNIRRDSLDTAKKGEKSA 146

Query: 148 KASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
             +ED + S+E DIQKIT   I NI+   E K KE++ 
Sbjct: 147 DLTEDDLFSIEEDIQKITKKYIDNIEKIAENKNKELLE 184


>gi|27467853|ref|NP_764490.1| ribosome recycling factor [Staphylococcus epidermidis ATCC 12228]
 gi|57866733|ref|YP_188408.1| ribosome recycling factor [Staphylococcus epidermidis RP62A]
 gi|293366777|ref|ZP_06613453.1| ribosome recycling factor [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|33301559|sp|Q8CSU0|RRF_STAES RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|62900782|sp|Q5HPT2|RRF_STAEQ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|27315398|gb|AAO04532.1|AE016747_29 ribosome recycling factor [Staphylococcus epidermidis ATCC 12228]
 gi|57637391|gb|AAW54179.1| ribosome recycling factor [Staphylococcus epidermidis RP62A]
 gi|291319078|gb|EFE59448.1| ribosome recycling factor [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329736280|gb|EGG72552.1| ribosome recycling factor [Staphylococcus epidermidis VCU028]
 gi|329736543|gb|EGG72809.1| ribosome recycling factor [Staphylococcus epidermidis VCU045]
          Length = 184

 Score =  155 bits (392), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+L
Sbjct: 5   IKDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K
Sbjct: 65  VISPYDKSSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKKIGEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD++IK ID    +K+K+IM  
Sbjct: 125 VSIRNIRRDINDQLKKDEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVADKEKDIMSV 184


>gi|302670318|ref|YP_003830278.1| ribosome recycling factor Frr [Butyrivibrio proteoclasticus B316]
 gi|302394791|gb|ADL33696.1| ribosome recycling factor Frr [Butyrivibrio proteoclasticus B316]
          Length = 183

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 115/178 (64%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   D+M  +  +L++D+ ++R GR +P +LD +KV+ YG+  PL QV NV+V E R++
Sbjct: 5   LKAYNDKMQKSFDYLREDLASIRAGRANPHVLDKIKVDYYGTPTPLQQVGNVSVPEARII 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ WDK ++  +E+ I  S+LG+ P  +G V+R+  PE TEERR  L K      E +K
Sbjct: 65  QIAPWDKTLIKDIEKAIMMSDLGITPSNDGTVIRLVFPELTEERRKQLTKDIRKKGEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RRDG D  KK  K  + SED +  L  ++QKITD  IK+ID   EEK KE+M
Sbjct: 125 VAVRNVRRDGNDAFKKL-KGTEVSEDEINDLNEELQKITDKFIKDIDVAVEEKNKEVM 181


>gi|217964539|ref|YP_002350217.1| ribosome recycling factor [Listeria monocytogenes HCC23]
 gi|290893573|ref|ZP_06556556.1| ribosome recycling factor [Listeria monocytogenes FSL J2-071]
 gi|315282161|ref|ZP_07870629.1| ribosome recycling factor [Listeria marthii FSL S4-120]
 gi|254809517|sp|B8DG13|RRF_LISMH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|217333809|gb|ACK39603.1| ribosome recycling factor [Listeria monocytogenes HCC23]
 gi|290556918|gb|EFD90449.1| ribosome recycling factor [Listeria monocytogenes FSL J2-071]
 gi|307570895|emb|CAR84074.1| frr [Listeria monocytogenes L99]
 gi|313608995|gb|EFR84735.1| ribosome recycling factor [Listeria monocytogenes FSL F2-208]
 gi|313614193|gb|EFR87869.1| ribosome recycling factor [Listeria marthii FSL S4-120]
          Length = 185

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  KSG  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEELKKLEKSGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 185


>gi|52841939|ref|YP_095738.1| ribosome recycling factor [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54294594|ref|YP_127009.1| ribosome recycling factor [Legionella pneumophila str. Lens]
 gi|148359246|ref|YP_001250453.1| ribosome recycling factor [Legionella pneumophila str. Corby]
 gi|296107291|ref|YP_003618991.1| Ribosome recycling factor [Legionella pneumophila 2300/99 Alcoy]
 gi|60390233|sp|Q5WVZ0|RRF_LEGPL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390237|sp|Q5ZUT1|RRF_LEGPH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230796|sp|A5ICK7|RRF_LEGPC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|52629050|gb|AAU27791.1| ribosome recycling factor [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53754426|emb|CAH15910.1| Ribosome recycling factor [Legionella pneumophila str. Lens]
 gi|148281019|gb|ABQ55107.1| ribosome recycling factor [Legionella pneumophila str. Corby]
 gi|295649192|gb|ADG25039.1| Ribosome recycling factor [Legionella pneumophila 2300/99 Alcoy]
 gi|307610406|emb|CBW99976.1| ribosome recycling factor [Legionella pneumophila 130b]
          Length = 185

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  TI  L  DM  +RTGR + S+LD V V+ YGS  PL+QVAN+T  + R ++
Sbjct: 7   QDSEKRMKKTIEALHTDMSKIRTGRANASLLDHVMVDYYGSPTPLSQVANITTSDSRTIL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K MVA++E+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV     E+ ++
Sbjct: 67  VTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  + LK+  K    SED        IQK+TD  I  +D+   EK+K++M  
Sbjct: 127 SIRNIRRDANNQLKELVKEKAISEDDERRAAEAIQKLTDRYISEVDAVLAEKEKDLMEI 185


>gi|218295073|ref|ZP_03495909.1| ribosome recycling factor [Thermus aquaticus Y51MC23]
 gi|218244276|gb|EED10801.1| ribosome recycling factor [Thermus aquaticus Y51MC23]
          Length = 185

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 81/184 (44%), Positives = 117/184 (63%), Gaps = 7/184 (3%)

Query: 9   NIKDRMGDTISFLKK-------DMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+KD   +T S ++K       ++  LRTGR +P++L  +KVE YG+ VPL+Q+A V+  
Sbjct: 2   NLKDLYAETRSHMQKSLEALEHNLSGLRTGRANPALLLHLKVEYYGTPVPLSQIATVSAP 61

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           + R LVV  WD+  + ++E+ I +S+LGLNP  +G  L I +P  TEERR  LVK A  Y
Sbjct: 62  DARTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKELVKAARHY 121

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE+ +I++RNIRR+ ++ LKK  K    SED     E +IQKITD  I  +D   E+K+ 
Sbjct: 122 AEEGRIAIRNIRREALEKLKKLAKELHLSEDDTKRAEAEIQKITDEFIAKVDELLEKKEA 181

Query: 182 EIMH 185
           EI+H
Sbjct: 182 EILH 185


>gi|225024279|ref|ZP_03713471.1| hypothetical protein EIKCOROL_01154 [Eikenella corrodens ATCC
           23834]
 gi|224943304|gb|EEG24513.1| hypothetical protein EIKCOROL_01154 [Eikenella corrodens ATCC
           23834]
          Length = 185

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 113/172 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  L++++  +RTGR    +LD V+VE YGS VP++QVANVT+L+ R + V  ++
Sbjct: 12  KMQRSVEVLRENLAKVRTGRAHTGLLDQVEVEYYGSMVPVSQVANVTLLDARTISVKPYE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             M A+VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE  ++S+RN+
Sbjct: 72  GNMAAAVEKAIRDSNLGLNPASMGDLIRVPMPMLTEERRKDLIKVVRGEAEDGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  DH+KK  K  + SED     E  IQK+TD  I  +D   E K++++M
Sbjct: 132 RRDANDHIKKLLKDKEVSEDDARRGEEQIQKLTDKYIAEVDKLLEHKEEDLM 183


>gi|33152634|ref|NP_873987.1| ribosome recycling factor [Haemophilus ducreyi 35000HP]
 gi|38372405|sp|Q7VL83|RRF_HAEDU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33148858|gb|AAP96376.1| ribosome recycling factor [Haemophilus ducreyi 35000HP]
          Length = 185

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL QVANV   + R L 
Sbjct: 7   KDTQQRMEKSLEALKSHISKIRTGRAQPSLLDGIQVEYYGSATPLRQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ KI
Sbjct: 67  VNVFDRSLISAVEKAILTSDLGLNPSSAGATIRVPLPALTEERRRDLIKIVKNEGEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     +++IQKITD  +K +D     K+KE++ F
Sbjct: 127 AIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDGYVKKVDEVLMAKEKELLDF 185


>gi|326798845|ref|YP_004316664.1| ribosome-recycling factor [Sphingobacterium sp. 21]
 gi|326549609|gb|ADZ77994.1| Ribosome-recycling factor [Sphingobacterium sp. 21]
          Length = 187

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 119/186 (63%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQ--NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN +I LQ  +  D M   IS  + ++  +R G+  PSMLD + V+ YG+  PL+QV N+
Sbjct: 1   MNDLIKLQLEDANDSMQKAISHTESELTKIRAGKAMPSMLDGINVDYYGTPTPLSQVGNI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              +PR LV+  W+K +++++ER I +SN+GLNP  +G ++R+ VP  TEERR  LV+  
Sbjct: 61  NTPDPRSLVIQPWEKNLLSAIERAIIDSNIGLNPQNDGNIIRLAVPPLTEERRRELVRKV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AEK K+++RNIR+D  D +KK +  G  SED +   E ++QK+TD+ I  +D   E 
Sbjct: 121 KEEAEKGKVAIRNIRKDANDGIKKLKNDG-VSEDEIKVGEGEVQKLTDNFIAKVDKLAEA 179

Query: 179 KKKEIM 184
           K+K+IM
Sbjct: 180 KEKDIM 185


>gi|323697430|ref|ZP_08109342.1| ribosome recycling factor [Desulfovibrio sp. ND132]
 gi|323457362|gb|EGB13227.1| ribosome recycling factor [Desulfovibrio desulfuricans ND132]
          Length = 184

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K RM   I+ L KD   LRTGR + +++D + V+ YG+  P++Q+++V+V + + +
Sbjct: 5   LDDGKKRMSGAITALDKDFSKLRTGRATTALVDSILVDYYGTPTPISQLSSVSVPDSKTI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK    SVE+ I  S+LGLNP+ +G+++RI +P  TEERR  LVKVA  Y E +K
Sbjct: 65  TIQPWDKGAFGSVEKAIQTSDLGLNPVNDGKIIRISIPPLTEERRKELVKVAKKYTEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RRD  D LKK  K  + SED     E D+QK+TD  +K  D     K+KEI+  
Sbjct: 125 IAIRNVRRDMNDALKKMEKDKEISEDDQRRSEADVQKMTDDYVKKADEVMAAKEKEILEI 184


>gi|123443482|ref|YP_001007455.1| ribosome recycling factor [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332160595|ref|YP_004297172.1| ribosome recycling factor [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166231529|sp|A1JP79|RRF_YERE8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122090443|emb|CAL13311.1| ribosome recycling factor [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318606927|emb|CBY28425.1| ribosome recycling factor [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325664825|gb|ADZ41469.1| ribosome recycling factor [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859602|emb|CBX69942.1| ribosome-recycling factor [Yersinia enterocolitica W22703]
          Length = 185

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 114/174 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L ++V+D
Sbjct: 12  RMEKCLEVFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++S+RN+
Sbjct: 72  RSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  + +K   K  + SED     ++DIQK+TD+ IK +D+    K+ E+M F
Sbjct: 132 RRDANEKVKALLKDKEISEDEDRRSQDDIQKLTDAFIKKVDAALAAKETELMDF 185


>gi|73541567|ref|YP_296087.1| ribosome recycling factor [Ralstonia eutropha JMP134]
 gi|123624825|sp|Q470E0|RRF_RALEJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|72118980|gb|AAZ61243.1| ribosome recycling factor [Ralstonia eutropha JMP134]
          Length = 186

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+ + + R + 
Sbjct: 8   KSVEQKMQKSIEAFKADLAKVRTGRAHVGLLDHVQVDYYGSMVPISQVANIGLGDARTIT 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I + +LGLNP   G+V+R+P+P  TEERR  L KV    AE +KI
Sbjct: 68  VQPWEKKMVGAVEKAIRDCDLGLNPATMGEVIRVPMPPLTEERRKELTKVVKGEAEGAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  +  KK  K    SED     ++D+QK+TD  +  ID    EK+KEIM
Sbjct: 128 AVRNLRRDANEQFKKLVKDKAISEDDERRGQDDVQKLTDKYVAEIDKMVAEKEKEIM 184


>gi|329724306|gb|EGG60818.1| ribosome recycling factor [Staphylococcus epidermidis VCU144]
          Length = 184

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+L
Sbjct: 5   IKDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K
Sbjct: 65  VISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKKIGEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD++IK ID    +K+K+IM  
Sbjct: 125 VSIRNIRRDINDQLKKDEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVTDKEKDIMSV 184


>gi|314933438|ref|ZP_07840803.1| ribosome recycling factor [Staphylococcus caprae C87]
 gi|313653588|gb|EFS17345.1| ribosome recycling factor [Staphylococcus caprae C87]
          Length = 184

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+L
Sbjct: 5   IKDTKARMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK  V  +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K
Sbjct: 65  VISPYDKTSVDDIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKNVKKIGEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  DHLKK  K G  +ED + S  +D+QK TD++IK ID   E+K+++IM  
Sbjct: 125 VSIRNIRRDINDHLKKQEKKGDITEDDLRSQTDDVQKATDNSIKEIDQLVEDKEQDIMSV 184


>gi|332686704|ref|YP_004456478.1| ribosome recycling factor [Melissococcus plutonius ATCC 35311]
 gi|332370713|dbj|BAK21669.1| ribosome recycling factor [Melissococcus plutonius ATCC 35311]
          Length = 185

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   +RM      L++++  +R GR + S+LD ++VE YG   P+NQ+A +++ E R+L
Sbjct: 6   LKETTERMKKAEQNLQRELGQIRAGRANASLLDRIQVEYYGVMTPVNQLATISIPEARIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +ER I  S++G++P  +G ++R+ +P+ TEERR  L K     AE +K
Sbjct: 66  MITPFDKNSIKDIERAIQASDIGISPTSDGNIIRLVIPQLTEERRKELAKEVKKEAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD MD LKK  K+G  +ED + + E D+Q++TD++IKN+D+   EK+ EI+  
Sbjct: 126 IAVRNIRRDTMDTLKKQNKNGDITEDELHTSEKDVQQLTDNSIKNLDNIASEKEAEILEV 185


>gi|257453214|ref|ZP_05618513.1| ribosome recycling factor (RRF) [Fusobacterium sp. 3_1_5R]
 gi|317059748|ref|ZP_07924233.1| ribosome recycling factor [Fusobacterium sp. 3_1_5R]
 gi|313685424|gb|EFS22259.1| ribosome recycling factor [Fusobacterium sp. 3_1_5R]
          Length = 189

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 119/180 (66%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M  TI   K+   ++R GR S +MLD +KVE YGS +PLNQVA V+  E R+L
Sbjct: 8   IQECQNKMQKTIEATKEKFTSIRAGRASVAMLDNIKVEQYGSDMPLNQVATVSAPEARLL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M+  +E+ I  +NLG+NP  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 68  VIDPWDKTMIPKIEKAILAANLGMNPNNDGRVVRLVMPELTADRRKEYVKLAKKEAENGK 127

Query: 127 ISVRNIRRD---GMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D    +  ++K ++SG  SED +   E ++Q +TD TIK++D    +K+KEI
Sbjct: 128 IAVRNIRKDMNTALKKIEKDKESG-MSEDELKRFEAEVQTLTDKTIKDLDDLLAKKEKEI 186


>gi|306819855|ref|ZP_07453509.1| ribosome recycling factor [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304552102|gb|EFM40039.1| ribosome recycling factor [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 185

 Score =  155 bits (391), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 113/176 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q   ++M  TIS LK+D+ T+RTGR +P MLD + V+ YG+  P+ Q+A ++  +PR L 
Sbjct: 7   QTTNEKMEKTISVLKEDLNTIRTGRANPKMLDKLTVDYYGTVTPVKQIAAISSPDPRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +  +E+ I  ++LG+NP  +G ++RI +P+ TEERR  LVK A    E++K+
Sbjct: 67  IQPWDKSSLHLIEKAIQVADLGVNPTNDGLIIRISIPQLTEERRKELVKQAQKMGEQAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++RN+RRD  D +KK  K G  +ED      +DIQK+TD  IK ID     K+K+I
Sbjct: 127 AIRNLRRDANDLIKKGEKDGSIAEDEAKKELDDIQKLTDEHIKAIDGVIANKEKDI 182


>gi|206900181|ref|YP_002250924.1| ribosome recycling factor [Dictyoglomus thermophilum H-6-12]
 gi|206739284|gb|ACI18342.1| ribosome recycling factor [Dictyoglomus thermophilum H-6-12]
          Length = 185

 Score =  155 bits (391), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 115/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            + I+++M   +  +KK+   +RTG+ S  + D +K+  YG+ +PLNQVA + + E R +
Sbjct: 6   FKEIEEKMKKAVEVVKKEFQGIRTGKPSIGIFDEIKISYYGNMMPLNQVATLKIAEGRTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK ++  +E+ I +S LGL P  +GQV+R+  P  TEERR  LVKV H  AE  +
Sbjct: 66  LIQPWDKSIIGEIEKAILKSELGLTPQNDGQVIRVVFPPLTEERRKELVKVVHKEAENGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD ++  KK ++ GK SED    L+ ++QK+TD  I+ I+   E K+KEIM 
Sbjct: 126 VAIRNIRRDYLEIFKKEKQEGKISEDEFYRLQEELQKMTDKFIEEIEKLIEMKEKEIME 184


>gi|312796247|ref|YP_004029169.1| ribosome Recycling Factor (RRF) [Burkholderia rhizoxinica HKI 454]
 gi|312168022|emb|CBW75025.1| Ribosome Recycling Factor (RRF) [Burkholderia rhizoxinica HKI 454]
          Length = 186

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 114/172 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++   K D+  +RTGR    +LD ++V+ YGS+VP++QVAN+T+++ R + V  W+
Sbjct: 13  KMQRSLEAFKSDLAKIRTGRAHTGLLDHIQVDYYGSNVPISQVANLTLVDARTIGVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MVA VE+ I ES+LGLNP  +G ++R+P+P  TEERR  L KV  +  E +K++VRN+
Sbjct: 73  KKMVAVVEKAIRESDLGLNPATQGDLIRVPMPALTEERRRELTKVVKSEGESAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  D LKK  K    SED     ++++QK+TD  +  I+   + K+ EIM
Sbjct: 133 RRDANDQLKKLLKDKDISEDDERRAQDEVQKLTDKFVAEIEKLVQTKETEIM 184


>gi|294635121|ref|ZP_06713632.1| ribosome recycling factor [Edwardsiella tarda ATCC 23685]
 gi|291091498|gb|EFE24059.1| ribosome recycling factor [Edwardsiella tarda ATCC 23685]
          Length = 185

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K ++  +RTGR  P++LD ++VE YG+  PL Q+AN+   + R L V+V+D
Sbjct: 12  RMEKCVESFKGNISKIRTGRAHPNLLDGIQVEYYGAATPLRQLANIVAEDSRTLAVTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+K+  + AE  ++SVRN+
Sbjct: 72  RSMSGAIEKAILTSDLGLNPSSAGTVIRVPLPPLTEERRKDLIKLVRSEAESGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++DIQKITD  IK ID+   +K+KE+M F
Sbjct: 132 RRDANDKVKALLKDKEISEDEDRKSQDDIQKITDLMIKKIDAALADKEKELMEF 185


>gi|325579128|ref|ZP_08149084.1| ribosome recycling factor [Haemophilus parainfluenzae ATCC 33392]
 gi|301155649|emb|CBW15117.1| ribosome recycling factor [Haemophilus parainfluenzae T3T1]
 gi|325159363|gb|EGC71497.1| ribosome recycling factor [Haemophilus parainfluenzae ATCC 33392]
          Length = 185

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  ++  L+  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L 
Sbjct: 7   QDAEARMEKSLEALRGHIAKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  +  E+ K+
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKSEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E  IQK+TDS IK +D    +K+KE+M F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENDQHKAEEIIQKVTDSYIKKVDEILADKEKELMDF 185


>gi|262276524|ref|ZP_06054333.1| ribosome recycling factor [Grimontia hollisae CIP 101886]
 gi|262220332|gb|EEY71648.1| ribosome recycling factor [Grimontia hollisae CIP 101886]
          Length = 185

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 114/178 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + K+RM  ++  LK  +  +RTGR  P++LD + V+ YG+  PL Q+A++   + R L +
Sbjct: 8   DAKERMQKSVEALKNTLSKIRTGRAHPALLDGLSVDYYGASTPLKQLASIVAEDARTLAI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +V+DK +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  +++
Sbjct: 68  TVFDKSITQAVEKAIMTSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRGEAEGGRVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIRRD    LK   K  + SED     ++DIQK+TD+ +K ID+  E K+KE+M  
Sbjct: 128 VRNIRRDANSELKALLKEKEISEDEERRGQDDIQKLTDAAVKEIDTILEAKEKELMEV 185


>gi|91788554|ref|YP_549506.1| ribosome recycling factor [Polaromonas sp. JS666]
 gi|123059788|sp|Q12A34|RRF_POLSJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91697779|gb|ABE44608.1| ribosome recycling factor [Polaromonas sp. JS666]
          Length = 186

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           QN + +M  ++   K  +  +RTGR +P +LD V V+ YGS VP++QVANV++L+ R + 
Sbjct: 8   QNAEQKMQQSVDSFKNSLTKIRTGRANPGLLDTVHVDYYGSMVPISQVANVSLLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VS W+K M A +E+ I +S+LGLNP  +G ++R+P+P  TEERR  L KV  A  E +K+
Sbjct: 68  VSPWEKGMGAKIEKAIRDSDLGLNPAAQGDLIRVPMPAMTEERRKELTKVVRAEGEHAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + +KK  K    SED     +++IQK TD  I  +D     K+++IM
Sbjct: 128 AVRNLRRDANEGVKKLLKEKLVSEDDERRAQDEIQKFTDRFIAEVDKLVAGKEQDIM 184


>gi|227890626|ref|ZP_04008431.1| ribosome recycling factor, RRF [Lactobacillus salivarius ATCC
           11741]
 gi|301300274|ref|ZP_07206483.1| ribosome recycling factor [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|227867564|gb|EEJ74985.1| ribosome recycling factor, RRF [Lactobacillus salivarius ATCC
           11741]
 gi|300852115|gb|EFK79790.1| ribosome recycling factor [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 187

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M      L++++  +R GR + S+L+ + VE YG+  PLNQ+A ++V E R+L
Sbjct: 8   IKEAQEKMTKAEDSLRRELGNIRAGRANASLLNRINVEYYGAPTPLNQMAQISVPEARVL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  + ++E  I  S+LG+ P+ +G  +R+ +P+ TEERR  L K   A +E  K
Sbjct: 68  LVTPYDKSSLKNIEHAIMASDLGIAPMNDGTAIRLVIPQLTEERRKELAKQVKAVSETGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD LKK++K+G  +ED +  LEN  QK+TD +IKNID   E+K+KE++ 
Sbjct: 128 VAVRNIRRDMMDALKKAQKNGDLTEDDLRDLENQAQKVTDESIKNIDKITEDKEKEVLE 186


>gi|53719765|ref|YP_108751.1| ribosome recycling factor [Burkholderia pseudomallei K96243]
 gi|53723736|ref|YP_103192.1| ribosome recycling factor [Burkholderia mallei ATCC 23344]
 gi|67641707|ref|ZP_00440476.1| ribosome recycling factor [Burkholderia mallei GB8 horse 4]
 gi|76809671|ref|YP_333972.1| ribosome recycling factor [Burkholderia pseudomallei 1710b]
 gi|121598549|ref|YP_993369.1| ribosome recycling factor [Burkholderia mallei SAVP1]
 gi|124384027|ref|YP_001029194.1| ribosome recycling factor [Burkholderia mallei NCTC 10229]
 gi|126439886|ref|YP_001059466.1| ribosome recycling factor [Burkholderia pseudomallei 668]
 gi|126449064|ref|YP_001080876.1| ribosome recycling factor [Burkholderia mallei NCTC 10247]
 gi|126454912|ref|YP_001066749.1| ribosome recycling factor [Burkholderia pseudomallei 1106a]
 gi|134277912|ref|ZP_01764627.1| ribosome recycling factor [Burkholderia pseudomallei 305]
 gi|167000553|ref|ZP_02266364.1| ribosome recycling factor [Burkholderia mallei PRL-20]
 gi|167720163|ref|ZP_02403399.1| ribosome recycling factor [Burkholderia pseudomallei DM98]
 gi|167739168|ref|ZP_02411942.1| ribosome recycling factor [Burkholderia pseudomallei 14]
 gi|167816379|ref|ZP_02448059.1| ribosome recycling factor [Burkholderia pseudomallei 91]
 gi|167824757|ref|ZP_02456228.1| ribosome recycling factor [Burkholderia pseudomallei 9]
 gi|167846289|ref|ZP_02471797.1| ribosome recycling factor [Burkholderia pseudomallei B7210]
 gi|167894871|ref|ZP_02482273.1| ribosome recycling factor [Burkholderia pseudomallei 7894]
 gi|167903260|ref|ZP_02490465.1| ribosome recycling factor [Burkholderia pseudomallei NCTC 13177]
 gi|167911501|ref|ZP_02498592.1| ribosome recycling factor [Burkholderia pseudomallei 112]
 gi|167919510|ref|ZP_02506601.1| ribosome recycling factor [Burkholderia pseudomallei BCC215]
 gi|217421741|ref|ZP_03453245.1| ribosome recycling factor [Burkholderia pseudomallei 576]
 gi|226200090|ref|ZP_03795636.1| ribosome recycling factor [Burkholderia pseudomallei Pakistan 9]
 gi|237812805|ref|YP_002897256.1| ribosome recycling factor [Burkholderia pseudomallei MSHR346]
 gi|242317615|ref|ZP_04816631.1| ribosome recycling factor [Burkholderia pseudomallei 1106b]
 gi|254177852|ref|ZP_04884507.1| ribosome recycling factor [Burkholderia mallei ATCC 10399]
 gi|254189290|ref|ZP_04895801.1| ribosome recycling factor [Burkholderia pseudomallei Pasteur 52237]
 gi|254197752|ref|ZP_04904174.1| ribosome recycling factor [Burkholderia pseudomallei S13]
 gi|254200144|ref|ZP_04906510.1| ribosome recycling factor [Burkholderia mallei FMH]
 gi|254206482|ref|ZP_04912834.1| ribosome recycling factor [Burkholderia mallei JHU]
 gi|254258794|ref|ZP_04949848.1| ribosome recycling factor [Burkholderia pseudomallei 1710a]
 gi|254297208|ref|ZP_04964661.1| ribosome recycling factor [Burkholderia pseudomallei 406e]
 gi|254358109|ref|ZP_04974382.1| ribosome recycling factor [Burkholderia mallei 2002721280]
 gi|60390239|sp|Q62JC7|RRF_BURMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390241|sp|Q63T15|RRF_BURPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123598729|sp|Q3JR31|RRF_BURP1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230765|sp|A3MKU0|RRF_BURM7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230766|sp|A2SB75|RRF_BURM9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230767|sp|A1V566|RRF_BURMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230768|sp|A3NWM8|RRF_BURP0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230769|sp|A3NAU5|RRF_BURP6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|52210179|emb|CAH36158.1| ribosome recycling factor [Burkholderia pseudomallei K96243]
 gi|52427159|gb|AAU47752.1| ribosome recycling factor [Burkholderia mallei ATCC 23344]
 gi|76579124|gb|ABA48599.1| ribosome recycling factor [Burkholderia pseudomallei 1710b]
 gi|121227359|gb|ABM49877.1| ribosome recycling factor [Burkholderia mallei SAVP1]
 gi|124292047|gb|ABN01316.1| ribosome recycling factor [Burkholderia mallei NCTC 10229]
 gi|126219379|gb|ABN82885.1| ribosome recycling factor [Burkholderia pseudomallei 668]
 gi|126228554|gb|ABN92094.1| ribosome recycling factor [Burkholderia pseudomallei 1106a]
 gi|126241934|gb|ABO05027.1| ribosome recycling factor [Burkholderia mallei NCTC 10247]
 gi|134251562|gb|EBA51641.1| ribosome recycling factor [Burkholderia pseudomallei 305]
 gi|147749740|gb|EDK56814.1| ribosome recycling factor [Burkholderia mallei FMH]
 gi|147753925|gb|EDK60990.1| ribosome recycling factor [Burkholderia mallei JHU]
 gi|148027236|gb|EDK85257.1| ribosome recycling factor [Burkholderia mallei 2002721280]
 gi|157806852|gb|EDO84022.1| ribosome recycling factor [Burkholderia pseudomallei 406e]
 gi|157936969|gb|EDO92639.1| ribosome recycling factor [Burkholderia pseudomallei Pasteur 52237]
 gi|160698891|gb|EDP88861.1| ribosome recycling factor [Burkholderia mallei ATCC 10399]
 gi|169654493|gb|EDS87186.1| ribosome recycling factor [Burkholderia pseudomallei S13]
 gi|217395483|gb|EEC35501.1| ribosome recycling factor [Burkholderia pseudomallei 576]
 gi|225927774|gb|EEH23815.1| ribosome recycling factor [Burkholderia pseudomallei Pakistan 9]
 gi|237503136|gb|ACQ95454.1| ribosome recycling factor [Burkholderia pseudomallei MSHR346]
 gi|238522669|gb|EEP86112.1| ribosome recycling factor [Burkholderia mallei GB8 horse 4]
 gi|242140854|gb|EES27256.1| ribosome recycling factor [Burkholderia pseudomallei 1106b]
 gi|243063483|gb|EES45669.1| ribosome recycling factor [Burkholderia mallei PRL-20]
 gi|254217483|gb|EET06867.1| ribosome recycling factor [Burkholderia pseudomallei 1710a]
          Length = 186

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KSVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKTMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K  EIM
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRASDDVQKLTDKHVAEIDKLVQAKDAEIM 184


>gi|25028466|ref|NP_738520.1| ribosome recycling factor [Corynebacterium efficiens YS-314]
 gi|259507526|ref|ZP_05750426.1| ribosome recycling factor [Corynebacterium efficiens YS-314]
 gi|29336541|sp|Q8FP75|RRF_COREF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|23493751|dbj|BAC18720.1| putative ribosome recycling factor [Corynebacterium efficiens
           YS-314]
 gi|259164911|gb|EEW49465.1| ribosome recycling factor [Corynebacterium efficiens YS-314]
          Length = 185

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 116/175 (66%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM +T+   ++D++T+RTGR +P+M + V  E YG   P+ Q+++++V EPRML++  
Sbjct: 10  EERMSNTVEHTREDLITIRTGRANPAMFNGVLAEYYGVPTPITQMSSISVPEPRMLIIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++   +  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A    E  KI++R
Sbjct: 70  YEMSSMGVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMVKIAKGKGEDGKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+RR GM+ LKK +K G+  ED VA+ E ++ KIT   ++ +D     K+ E+M 
Sbjct: 130 NVRRKGMEQLKKLQKDGEFGEDEVAAAEKELDKITAHYVEQVDEIVARKEAELME 184


>gi|83721123|ref|YP_442554.1| ribosome recycling factor [Burkholderia thailandensis E264]
 gi|167581481|ref|ZP_02374355.1| ribosome recycling factor [Burkholderia thailandensis TXDOH]
 gi|167619591|ref|ZP_02388222.1| ribosome recycling factor [Burkholderia thailandensis Bt4]
 gi|257138763|ref|ZP_05587025.1| ribosome recycling factor [Burkholderia thailandensis E264]
 gi|123536967|sp|Q2SWZ5|RRF_BURTA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|83654948|gb|ABC39011.1| ribosome recycling factor [Burkholderia thailandensis E264]
          Length = 186

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPALTEERRRELTKVVKGEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQSKEAEIM 184


>gi|302389812|ref|YP_003825633.1| ribosome recycling factor [Thermosediminibacter oceani DSM 16646]
 gi|302200440|gb|ADL08010.1| ribosome recycling factor [Thermosediminibacter oceani DSM 16646]
          Length = 185

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 118/174 (67%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM   +  LK ++  +R GR S ++L+ V V+ YG   P+NQVA V+V EPRM+++  W
Sbjct: 11  ERMKKVLGNLKSELAAIRAGRASTALLEKVFVDYYGVPTPVNQVATVSVPEPRMILIQPW 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D +M++++E+ I +S+LGL P  +G+V+R+ +PE T ERR  LVK+A   AE +K+ VRN
Sbjct: 71  DVKMLSAIEKAILKSDLGLTPTSDGKVIRLILPELTSERRKELVKMAKKKAEDAKVLVRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IRRD  + +KK  K+G+ SED     + +IQK+TD+ I+ ID  F  K+KEIM 
Sbjct: 131 IRRDANELVKKMEKNGEISEDDSKRSQEEIQKLTDNYIEEIDKAFTNKEKEIME 184


>gi|257467196|ref|ZP_05631507.1| ribosome recycling factor (RRF) [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315918326|ref|ZP_07914566.1| ribosome recycling factor [Fusobacterium gonidiaformans ATCC 25563]
 gi|313692201|gb|EFS29036.1| ribosome recycling factor [Fusobacterium gonidiaformans ATCC 25563]
          Length = 189

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 119/180 (66%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M  TI   K+   ++R GR S +MLD +KVE YGS +PLNQVA V+  E R+L
Sbjct: 8   IQECQNKMQKTIEATKEKFTSIRAGRASVAMLDNIKVEQYGSDMPLNQVATVSAPEARLL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M+  +E+ I  +NLG+NP  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 68  VIDPWDKTMILKIEKAILAANLGMNPNNDGRVVRLVMPELTADRRKEYVKLAKKEAENGK 127

Query: 127 ISVRNIRRD---GMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D    +  ++K ++SG  SED +   E ++Q +TD TIK++D    +K+KEI
Sbjct: 128 IAVRNIRKDMNTALKKIEKDKESG-MSEDELKRFEAEVQTLTDKTIKDLDDLLAKKEKEI 186


>gi|90961538|ref|YP_535454.1| ribosome recycling factor [Lactobacillus salivarius UCC118]
 gi|122449175|sp|Q1WUG4|RRF_LACS1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|90820732|gb|ABD99371.1| Ribosome Recycling Factor, RRF [Lactobacillus salivarius UCC118]
          Length = 187

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M      L++++  +R GR + S+L+ + VE YG+  PLNQ+A ++V E R+L
Sbjct: 8   IKEAQEKMTKAEDSLRRELGNIRAGRANASLLNRINVEYYGAPTPLNQMAQISVPEARVL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  + ++E  I  S+LG+ P+ +G  +R+ +P+ TEERR  L K   A +E  K
Sbjct: 68  LVTPYDKTSLKNIEHAIMASDLGIAPMNDGTAIRLVIPQLTEERRKELAKQVKAVSETGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD LKK++K+G  +ED +  LEN  QK+TD +IKNID   E+K+KE++ 
Sbjct: 128 VAVRNIRRDMMDALKKAQKNGDLTEDDLRDLENQAQKVTDESIKNIDKITEDKEKEVLE 186


>gi|88812380|ref|ZP_01127630.1| Ribosome recycling factor [Nitrococcus mobilis Nb-231]
 gi|88790387|gb|EAR21504.1| Ribosome recycling factor [Nitrococcus mobilis Nb-231]
          Length = 185

 Score =  154 bits (390), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 110/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RMG +I  L  +   +RTGR   S+LD + V  YG+ +PLNQVA+VTV +PR L V+ W+
Sbjct: 12  RMGKSIEALNHEFHKIRTGRAHTSLLDHITVTYYGAKMPLNQVASVTVSDPRTLSVTPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+  VE+ I ES+LGL P   G V+RIP+P  TEERR  L++V     E+++I++RN+
Sbjct: 72  KGMIPVVEKAILESDLGLTPNTAGGVIRIPLPPLTEERRRELIRVVKHETEQARIAIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD    LK   K  + +ED     E+DIQK+TD  I  +DS    K+KE+M
Sbjct: 132 RRDANSALKARLKDKEITEDDEKRAEDDIQKLTDKHISEVDSLLVAKEKELM 183


>gi|322831591|ref|YP_004211618.1| ribosome recycling factor [Rahnella sp. Y9602]
 gi|321166792|gb|ADW72491.1| ribosome recycling factor [Rahnella sp. Y9602]
          Length = 185

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 80/174 (45%), Positives = 108/174 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SP +LD + VE YGS  PL Q+A VTV + R L +SV+D
Sbjct: 12  RMEKCVESFKTHISKIRTGRASPGILDGIMVEYYGSATPLRQLAQVTVEDSRTLAISVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RSISAAVEKAIMTSDLGLNPSSAGATIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D  K   K  + SED     ++DIQK+TD  IK ID    EK+ E+M F
Sbjct: 132 RRDANDKTKALLKDKEISEDEDRRSQDDIQKLTDIFIKKIDVALSEKEAELMEF 185


>gi|118602299|ref|YP_903514.1| ribosome recycling factor [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166231221|sp|A1AVT6|RRF_RUTMC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118567238|gb|ABL02043.1| ribosome recycling factor [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 185

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +++ LK     +R  R   S+L+ + V+ YGS VPL+QVAN++V + R   
Sbjct: 7   QDAQSRMNKSVASLKNAFSKIRANRAHSSLLEQIHVDYYGSMVPLSQVANISVEDSRTFK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VS W+K+MVA +E+ I  SNLGLNP   GQ++RIP+P  T+ERR  LVK+    AE++K+
Sbjct: 67  VSPWEKDMVAVIEKAIMTSNLGLNPQTMGQIMRIPLPPLTQERRGELVKIVKDEAEQAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD     K+  K  + S D     EN IQKITD+ IK I++ F EK+  ++  
Sbjct: 127 AIRNIRRDANSDFKELLKEKEISRDGARKAENSIQKITDTYIKEIEAKFCEKENSLLEI 185


>gi|26988326|ref|NP_743751.1| ribosome recycling factor [Pseudomonas putida KT2440]
 gi|148549389|ref|YP_001269491.1| ribosome recycling factor [Pseudomonas putida F1]
 gi|34924941|sp|Q88MH7|RRF_PSEPK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231212|sp|A5W847|RRF_PSEP1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|24983074|gb|AAN67215.1|AE016348_7 ribosome recycling factor [Pseudomonas putida KT2440]
 gi|148513447|gb|ABQ80307.1| ribosome recycling factor [Pseudomonas putida F1]
 gi|313500238|gb|ADR61604.1| Frr [Pseudomonas putida BIRD-1]
          Length = 185

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 115/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG +I  L +++  +RTGR  PS+LD VKV A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMGKSIEALSRNLAAIRTGRAHPSILDSVKVTAWGSEMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A   AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQASGVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD +  LKK  K  + SED      ++IQK+TD  +  +D+ F+ K+K++M
Sbjct: 127 AVRNVRRDALADLKKLTKDKEISEDEERRAADEIQKLTDKFVAEVDAAFKAKEKDLM 183


>gi|315648104|ref|ZP_07901205.1| ribosome recycling factor [Paenibacillus vortex V453]
 gi|315276750|gb|EFU40093.1| ribosome recycling factor [Paenibacillus vortex V453]
          Length = 184

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 114/178 (64%), Gaps = 1/178 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N ++RM   I  LK+D+ TLR GR +P++LD + VE YG+  PLNQ+AN++  + R L+
Sbjct: 7   KNAEERMEKAILSLKRDLATLRAGRAAPALLDRITVEYYGAPTPLNQLANISTPDSRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +A +E+ I +S++GL P  +G  +R+ VP  TEERR  LVK+   + E++K+
Sbjct: 67  IQPWDKSSLADIEKAIMKSDIGLTPANDGNQIRLVVPALTEERRTELVKMTKKFGEEAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RNIRRD  D +KK  K+   SED     + DIQK TD  I  +D     K+KEIM 
Sbjct: 127 AIRNIRRDANDDIKKLEKTD-ISEDESRRHQEDIQKATDKFIAEVDKVLVAKEKEIME 183


>gi|227824516|ref|ZP_03989348.1| ribosome recycling factor [Acidaminococcus sp. D21]
 gi|226905015|gb|EEH90933.1| ribosome recycling factor [Acidaminococcus sp. D21]
          Length = 187

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +  L  ++  +RTGR +PS+LD VKV+ YG+  P+NQ+ANV+V EPRM+V+  WD
Sbjct: 14  KMTSALKALHTELAAIRTGRATPSLLDQVKVDYYGTATPVNQLANVSVPEPRMIVIQPWD 73

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  +E+ I  S+LGLNP  +G V+R+ +P  TEERR  LVKV H   E ++++VRNI
Sbjct: 74  KSLMKEIEKAIMTSDLGLNPNNDGTVIRLSLPILTEERRKELVKVVHKKGESARVAVRNI 133

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR+  D +KK  K  + +ED      +  QK+TD  +K ID    +K+KE+M  
Sbjct: 134 RREYNDAVKKLLKGKEITEDDSKDAMDASQKLTDQYMKQIDDILAKKEKEVMSI 187


>gi|218888003|ref|YP_002437324.1| ribosome recycling factor [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|226703259|sp|B8DSA1|RRF_DESVM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|66766332|dbj|BAD99030.1| ribosome recycling factor [Desulfovibrio vulgaris]
 gi|218758957|gb|ACL09856.1| ribosome recycling factor [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 186

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   +  L ++   LRTGR S S++D +KV+ YG+  P++Q+A+V+V + R L
Sbjct: 7   LLDAEERMEKALGSLDREFAKLRTGRASTSLVDNIKVDYYGTPTPISQLASVSVPDSRTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+     VE+ I +S+LGLNP+ +G+++RI +P  TEERR  LVKVA  Y E++K
Sbjct: 67  TIQPWDRSAFQLVEKAIMKSDLGLNPVNDGKIIRISIPPLTEERRKDLVKVARKYTEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K  + SED V    +D+QK+TD  +   D     K+KEIM  
Sbjct: 127 VAVRNVRRDANDALKKLEKGKEISEDDVRKSTDDVQKLTDRFVAKSDEKCTAKEKEIMEL 186


>gi|313886710|ref|ZP_07820420.1| ribosome recycling factor [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332300074|ref|YP_004441995.1| Ribosome-recycling factor [Porphyromonas asaccharolytica DSM 20707]
 gi|312923872|gb|EFR34671.1| ribosome recycling factor [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332177137|gb|AEE12827.1| Ribosome-recycling factor [Porphyromonas asaccharolytica DSM 20707]
          Length = 186

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 75/171 (43%), Positives = 111/171 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   + FL+  +  +R G+ +P +LD + VEAYG+ +PLNQVA VTV + R L ++ WDK
Sbjct: 14  MLKAVEFLQDKLDRIRAGKANPVLLDDITVEAYGAPMPLNQVATVTVPDARTLAITPWDK 73

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
           +++  +E+GI +SNLG+ P   G+++RI +P  TEERR  LVK   A +E++KIS+RN R
Sbjct: 74  KLIKDIEKGILDSNLGITPTNNGEMIRIAMPPLTEERRKELVKQCKAESEEAKISIRNAR 133

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +D  KK+ K+    ED +   END QK+ D  I  ++     K+KEIM
Sbjct: 134 RDAIDAAKKAVKAEDLPEDTIKQTENDAQKLHDKYIGRVEEALAAKEKEIM 184


>gi|254448744|ref|ZP_05062201.1| ribosome recycling factor [gamma proteobacterium HTCC5015]
 gi|198261585|gb|EDY85873.1| ribosome recycling factor [gamma proteobacterium HTCC5015]
          Length = 185

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 114/181 (62%), Gaps = 1/181 (0%)

Query: 6   DLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q + + RM  ++  L+ D+  +RTGR  PS+L+ ++VE YG+  P+ QVAN+TV + R
Sbjct: 4   DIQKDAESRMKKSLESLQGDLTRIRTGRAHPSLLEHIQVEYYGAKTPIKQVANITVEDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            LVV+ W+K+MV ++E+ I ES+LGLNP   G V+RIP+P  TEERR   VK+     E+
Sbjct: 64  TLVVTPWEKDMVQTIEKAIMESDLGLNPTSAGTVMRIPLPPLTEERRKEFVKLVRQEGEQ 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            K+++RNIRRD     K   K  + SED     E  IQK+TD  +  +D     K++E+M
Sbjct: 124 GKVAIRNIRRDANGDFKDLLKEKEISEDEQRRAEEVIQKLTDKYVAEVDGLLAAKEQELM 183

Query: 185 H 185
            
Sbjct: 184 E 184


>gi|71903032|ref|YP_279835.1| ribosome recycling factor [Streptococcus pyogenes MGAS6180]
 gi|123640384|sp|Q48UX6|RRF_STRPM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|71802127|gb|AAX71480.1| ribosome recycling factor [Streptococcus pyogenes MGAS6180]
          Length = 185

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 116/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  IK ID    EK+KE++
Sbjct: 126 IAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKVTDDAIKEIDRMTAEKEKELL 183


>gi|254252062|ref|ZP_04945380.1| Ribosome recycling factor [Burkholderia dolosa AUO158]
 gi|124894671|gb|EAY68551.1| Ribosome recycling factor [Burkholderia dolosa AUO158]
          Length = 186

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G V+R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATTGDVIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQTKEAEIM 184


>gi|116618296|ref|YP_818667.1| ribosome recycling factor [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431621|ref|ZP_03913657.1| ribosome recycling factor [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|122271504|sp|Q03WX8|RRF_LEUMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116097143|gb|ABJ62294.1| ribosome recycling factor [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227352613|gb|EEJ42803.1| ribosome recycling factor [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 181

 Score =  154 bits (389), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 78/181 (43%), Positives = 119/181 (65%), Gaps = 3/181 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
             DL N K+RM      L++++  +RTGR +P++L+ V+VE YG+  PLNQVA+++V E 
Sbjct: 2   TFDLTNAKERMKGAQEALQRELANIRTGRANPNILNRVEVEYYGAMTPLNQVASISVPEA 61

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R+L+++ +DK  + ++   I+ S+LGLNP  +G ++R+ +P+ TEERR  L K   A AE
Sbjct: 62  RILLITPFDKSALEAIVHAINVSDLGLNPASDGNIVRLAIPQMTEERRKELAKEVKAEAE 121

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K+K+SVRN+RRD MD +KK +      ED     E+  QK+TD  IK ID    EK+KE+
Sbjct: 122 KAKVSVRNVRRDIMDDIKKDK---DMPEDDARKAEDQTQKLTDENIKAIDEIAAEKEKEL 178

Query: 184 M 184
           +
Sbjct: 179 L 179


>gi|261338830|ref|ZP_05966688.1| hypothetical protein ENTCAN_05025 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318653|gb|EFC57591.1| ribosome recycling factor [Enterobacter cancerogenus ATCC 35316]
          Length = 185

 Score =  154 bits (389), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMDKCVEAFKNQISKIRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDTRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  ++E+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RSMSPAIEKAIMASDLGLNPSSAGADIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++D+QK+TD+ IK ID+   +K+ E+M F
Sbjct: 132 RRDANDKVKALLKEKEISEDDDRRSQDDVQKMTDAAIKKIDAALADKEAELMQF 185


>gi|222100166|ref|YP_002534734.1| Ribosome recycling factor [Thermotoga neapolitana DSM 4359]
 gi|254809538|sp|B9K8T5|RRF_THENN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|221572556|gb|ACM23368.1| Ribosome recycling factor [Thermotoga neapolitana DSM 4359]
          Length = 185

 Score =  154 bits (389), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M  T+  ++ ++  +RTG+ SP++L+ +KV+ YG   P+NQ+A ++V E R L
Sbjct: 6   IKEAKEKMKKTLEKIEDELKKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISVSEERTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD+ +++ +E+ I+ S+LGLNP+ +G V+R+  P  T E+R   VK A    E+ K
Sbjct: 66  VIKPWDRSVLSLIEKAINASDLGLNPVNDGNVIRLVFPTPTTEQREKWVKKAKEIVEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR+ M  +K+ +K G   ED    LEN++QK+TD  I+ +D  FE KKKEIM F
Sbjct: 126 IAIRNIRREIMKKIKEDQKEGNIPEDDARRLENEVQKLTDEFIEKLDEVFEIKKKEIMEF 185


>gi|260772225|ref|ZP_05881141.1| ribosome recycling factor [Vibrio metschnikovii CIP 69.14]
 gi|260611364|gb|EEX36567.1| ribosome recycling factor [Vibrio metschnikovii CIP 69.14]
          Length = 185

 Score =  154 bits (389), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PL+Q+ANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKIRTGRAHPSLLSGLSVEYYGASTPLSQIANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAILMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     +++IQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDEERKAQDEIQKLTDAAVKKIDDILAVKEKELMEV 185


>gi|313891269|ref|ZP_07824887.1| ribosome recycling factor [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120336|gb|EFR43457.1| ribosome recycling factor [Streptococcus pseudoporcinus SPIN 20026]
          Length = 185

 Score =  154 bits (389), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 117/183 (63%), Gaps = 2/183 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N +ID    K R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ++++TV 
Sbjct: 3   NAIID--KAKQRFEQSFQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLSSITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L++S +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K     
Sbjct: 61  EARVLLISPFDKNSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKNLAKEVKKV 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E  K+++RNIRRD MD  KK  K  + SED + +LE DIQK+TD  IK+ID+   EK+K
Sbjct: 121 GENQKVAIRNIRRDAMDEAKKQEKDKEISEDELKTLEKDIQKVTDDAIKHIDAMTAEKEK 180

Query: 182 EIM 184
           E++
Sbjct: 181 ELL 183


>gi|222151092|ref|YP_002560246.1| ribosome recycling factor [Macrococcus caseolyticus JCSC5402]
 gi|254809518|sp|B9EBD9|RRF_MACCJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|222120215|dbj|BAH17550.1| ribosome recycling factor [Macrococcus caseolyticus JCSC5402]
          Length = 185

 Score =  154 bits (388), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +K +M  +I  L++D   +R G  + ++LD V V  YG+  P+ Q+A ++V EPRML
Sbjct: 6   MNELKSKMEKSIESLQRDFAAIRAGHANANLLDRVSVVYYGAETPVQQLAGISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  + + I+ +NLG+NP  +G V+RI VP  TEERR  LVK A   AE SK
Sbjct: 66  LVTPYDKTSIDDILKAINMANLGVNPTSDGNVIRITVPALTEERRKELVKEAKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RNIRRD  D LKK+ K+G  +ED + S  +D+Q  TD  IK ID     K+K+I+ 
Sbjct: 126 IAIRNIRRDANDALKKAEKAGDITEDDLKSFSDDVQAETDKFIKKIDELTASKEKDILE 184


>gi|325849053|ref|ZP_08170545.1| ribosome recycling factor [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480298|gb|EGC83361.1| ribosome recycling factor [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 185

 Score =  154 bits (388), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 103/158 (65%)

Query: 28  LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           +R GR + S+LD +    YGS  P+NQ A ++  EPR+LV+  WDK  +  +E+ I++S+
Sbjct: 27  IRAGRANDSILDGLTFSYYGSQTPINQAATISTPEPRLLVIKPWDKSNIKEIEKAINKSD 86

Query: 88  LGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSG 147
           +G+NP  +G+V+R+P P  TEERR  L K  + Y+E SKI +RNIRRD +D  KK  KS 
Sbjct: 87  IGINPQNDGEVIRLPFPALTEERRKDLTKQVNDYSEDSKIQIRNIRRDSLDVAKKGEKSA 146

Query: 148 KASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
             +ED + S+E DIQKIT   I NI+   E K KE++ 
Sbjct: 147 DLTEDDLFSIEEDIQKITKKYIDNIEKIAENKNKELLE 184


>gi|223044216|ref|ZP_03614253.1| ribosome recycling factor [Staphylococcus capitis SK14]
 gi|222442366|gb|EEE48474.1| ribosome recycling factor [Staphylococcus capitis SK14]
          Length = 184

 Score =  154 bits (388), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+L
Sbjct: 5   IKDTKARMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK  V  +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K
Sbjct: 65  VISPYDKTSVDDIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKNVKKIGEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  DHLKK  K+G  +ED + S  +D+QK TD++IK ID   ++K+++IM  
Sbjct: 125 VSIRNIRRDINDHLKKEEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVDDKEQDIMSV 184


>gi|167586858|ref|ZP_02379246.1| ribosome recycling factor [Burkholderia ubonensis Bu]
          Length = 186

 Score =  154 bits (388), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM
Sbjct: 128 AIRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKHVTEIDKLVQSKEAEIM 184


>gi|225026987|ref|ZP_03716179.1| hypothetical protein EUBHAL_01243 [Eubacterium hallii DSM 3353]
 gi|224955672|gb|EEG36881.1| hypothetical protein EUBHAL_01243 [Eubacterium hallii DSM 3353]
          Length = 181

 Score =  154 bits (388), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 119/178 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D+M  +I  L+++  ++R GR +P +LD +KV+ YG+  PL QV N++V EPR++
Sbjct: 2   IKKFEDKMQKSIESLEREYNSIRAGRANPHVLDKIKVDYYGTPTPLQQVGNISVPEPRII 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++ ++E+ I +S++G+NP  +G+V+R+  PE TEERR  LVK      E +K
Sbjct: 62  TIQPWETSLLKAIEKEIMQSDIGINPTNDGKVIRLVFPELTEERRKELVKDVKKKGEAAK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD  D LKK+ K+ + +ED +   ++ +QK TD  IK ID   ++K KEI+
Sbjct: 122 VAIRNIRRDANDSLKKANKNSEITEDELKDQQDKVQKATDKYIKTIDGMIDKKSKEIL 179


>gi|154484746|ref|ZP_02027194.1| hypothetical protein EUBVEN_02463 [Eubacterium ventriosum ATCC
           27560]
 gi|149734594|gb|EDM50511.1| hypothetical protein EUBVEN_02463 [Eubacterium ventriosum ATCC
           27560]
          Length = 184

 Score =  154 bits (388), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 112/174 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +D+M  +++ L ++  T+R GR +P +LD +K++ YG+  PL QV NV+V E RM+ +  
Sbjct: 9   EDKMEKSLANLGEEYATIRAGRANPHILDKIKIDYYGTPTPLQQVGNVSVPEARMICIQP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD  ++  +E  I+ S++G+NP  +G+V+R+  PE TE+RR  LVK      E +KI++R
Sbjct: 69  WDASILKDIEHAINMSDVGINPTNDGKVIRLVFPELTEDRRKELVKDVKKKGENAKIAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRRD +D +KK  K    SED V   ++D+QK TD  IK ID   EEK  EIM
Sbjct: 129 NIRRDAIDAIKKKGKEDGISEDEVKGYQDDVQKKTDEYIKKIDVAIEEKSNEIM 182


>gi|78066795|ref|YP_369564.1| ribosome recycling factor [Burkholderia sp. 383]
 gi|123568180|sp|Q39F46|RRF_BURS3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|77967540|gb|ABB08920.1| ribosome recycling factor [Burkholderia sp. 383]
          Length = 186

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    MLD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIDAFKSDLAKIRTGRAHTGMLDHVQVDYYGSMVPISQVANMTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G  +R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKPMVAKVEKAIREADLGLNPATSGDQIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRASDDVQKLTDKHVAEIDKLVQSKEAEIM 184


>gi|303240826|ref|ZP_07327339.1| ribosome recycling factor [Acetivibrio cellulolyticus CD2]
 gi|302591714|gb|EFL61449.1| ribosome recycling factor [Acetivibrio cellulolyticus CD2]
          Length = 185

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 122/180 (67%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           + ++I+++M  TI+ LK ++  +R GR +P++LD + V+ YG+  P+NQ+A+V+V E R+
Sbjct: 5   EYKSIEEKMKKTINVLKDELTGVRAGRANPAILDKLTVDYYGTPTPINQIASVSVPEGRV 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +++  W+ +M+  +E+ I +S++G+NP  +G+V+R+  P  TEERR  L KV   Y E +
Sbjct: 65  IMIQPWEAKMIKEIEKEIQKSDIGINPNNDGKVIRLVFPMLTEERRKELTKVVKKYGEDA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++R IRRDG++H+K  +K G+ +ED + + E DIQ +TD  I  ID   E K  EI+ 
Sbjct: 125 KVAIRAIRRDGIEHMKTLKKDGELTEDDLKTAEKDIQNMTDKYIAEIDKVVELKDAEILE 184


>gi|268610455|ref|ZP_06144182.1| ribosome recycling factor [Ruminococcus flavefaciens FD-1]
          Length = 184

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 116/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K++M   I+ L  +  ++R GR +PS+LD V V+ YG+  P+NQ+A V+V E R L
Sbjct: 5   INQAKEKMTKCINSLGNEFASIRAGRANPSVLDKVTVDYYGAPTPINQLAAVSVSEGRTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S W+K  + ++E+ I  S++G+NP  +G V+R+  P+ TE+RR  L K      EK+K
Sbjct: 65  VISPWEKPQLKAIEKAIQASDIGINPTNDGNVIRLTFPQLTEDRRKELAKEIKGLGEKAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN RRD M+ LKK +K+ + +ED +A  E  +QKITD  I +ID    +K+KEIM
Sbjct: 125 VTVRNARRDTMEKLKKMKKNSEITEDELADGEKKVQKITDGFIDDIDKAVADKEKEIM 182


>gi|197286128|ref|YP_002152000.1| ribosome recycling factor [Proteus mirabilis HI4320]
 gi|227357247|ref|ZP_03841604.1| ribosome recycling factor [Proteus mirabilis ATCC 29906]
 gi|238690100|sp|B4F2D0|RRF_PROMH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|194683615|emb|CAR44513.1| ribosome recycling factor [Proteus mirabilis HI4320]
 gi|227162510|gb|EEI47499.1| ribosome recycling factor [Proteus mirabilis ATCC 29906]
          Length = 185

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR SP++LD + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKSQINKVRTGRASPNLLDGIVVEYYGAPTPLNQVANVVAEDGRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +  +VE+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  ITVFDRTLAPAVEKAIMASDLGLNPSSAGAIIRVPLPPLTEERRKDLIKVVRGDAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  D +K   K  + SED     +++IQK+TD  IK ID     K+ E+M F
Sbjct: 127 SIRNIRRDANDKIKALLKDKEISEDDERRSQDEIQKLTDMFIKKIDEALTLKEAELMEF 185


>gi|251797408|ref|YP_003012139.1| ribosome recycling factor [Paenibacillus sp. JDR-2]
 gi|247545034|gb|ACT02053.1| ribosome recycling factor [Paenibacillus sp. JDR-2]
          Length = 184

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 116/185 (62%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M Q I  ++ ++RM   I  LK+D+ TLR GR +P++LD V+VE YG+  P+ Q+AN+ V
Sbjct: 1   MPQAIK-KSAEERMEKAIGALKRDLATLRAGRATPALLDRVQVEYYGAPTPVAQLANINV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L +  WDK  +A++E+ I +S+LGL P  +G  +RI +P  TEERR  LVK    
Sbjct: 60  PDSRTLFIQPWDKSSIAAIEKAIMKSDLGLTPSNDGSAIRITLPPLTEERRSELVKTTKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + E++K+++RNIRRD  D +KK  K+   SED     + DIQK TD  I  +D     K+
Sbjct: 120 FGEEAKVAIRNIRRDANDDIKKLEKTT-ISEDESRRHQEDIQKATDRFIAEVDKVLVAKE 178

Query: 181 KEIMH 185
           KEIM 
Sbjct: 179 KEIME 183


>gi|206578649|ref|YP_002240340.1| ribosome recycling factor [Klebsiella pneumoniae 342]
 gi|238893168|ref|YP_002917902.1| ribosome recycling factor [Klebsiella pneumoniae NTUH-K2044]
 gi|262044757|ref|ZP_06017804.1| ribosome recycling factor [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288937046|ref|YP_003441105.1| ribosome recycling factor [Klebsiella variicola At-22]
 gi|290512467|ref|ZP_06551833.1| ribosome recycling factor [Klebsiella sp. 1_1_55]
 gi|330001650|ref|ZP_08304076.1| ribosome recycling factor [Klebsiella sp. MS 92-3]
 gi|226749933|sp|B5Y1J9|RRF_KLEP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|206567707|gb|ACI09483.1| ribosome recycling factor [Klebsiella pneumoniae 342]
 gi|238545484|dbj|BAH61835.1| ribosome releasing factor [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259037907|gb|EEW39131.1| ribosome recycling factor [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288891755|gb|ADC60073.1| ribosome recycling factor [Klebsiella variicola At-22]
 gi|289774808|gb|EFD82810.1| ribosome recycling factor [Klebsiella sp. 1_1_55]
 gi|328537592|gb|EGF63812.1| ribosome recycling factor [Klebsiella sp. MS 92-3]
          Length = 185

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+
Sbjct: 72  RSMSAAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 132 RRDANDKVKALLKEKEISEDDDRRSQDDVQKMTDAAIKKVDAALADKEAELMQF 185


>gi|145295926|ref|YP_001138747.1| ribosome recycling factor [Corynebacterium glutamicum R]
 gi|166230782|sp|A4QF29|RRF_CORGB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|140845846|dbj|BAF54845.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 185

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 113/175 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM  T+   ++D+ T+RTGR +P+M + V  E YG   P+ Q+++++V EPRML++  
Sbjct: 10  EERMTATVEHTREDLTTIRTGRANPAMFNGVMAEYYGVPTPITQMSSISVPEPRMLLIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++   +  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A    E  KI++R
Sbjct: 70  YEMSSMQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDMVKLAKGKGEDGKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR GMD LKK +K G A ED V + E ++ K+T   +  +D     K+KE+M 
Sbjct: 130 NIRRKGMDQLKKLQKDGDAGEDEVQAAEKELDKVTAGFVAQVDEVVARKEKELME 184


>gi|90408931|ref|ZP_01217066.1| ribosome releasing factor [Psychromonas sp. CNPT3]
 gi|90309959|gb|EAS38109.1| ribosome releasing factor [Psychromonas sp. CNPT3]
          Length = 185

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 110/173 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T+   K  +  +RTGR  PS+LD + V  YGS+ PL QV+N++  + R L V+V+D
Sbjct: 12  RMSKTVESFKSQLAKVRTGRAHPSLLDGIMVPYYGSNTPLRQVSNISTEDSRTLTVTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             ++A+VE+ I  SNLGLNP+  G V+RIP+P  TEERR  L+KV    AE S+I++RNI
Sbjct: 72  ATLIAAVEKAIMGSNLGLNPMSAGTVIRIPLPPLTEERRKDLIKVVRGEAENSRIAIRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD    LK   K    SED +   E  +QK+T+ ++K+ID     K+KE+M 
Sbjct: 132 RRDANGDLKGLEKDKDISEDDLRVGEELVQKVTNDSVKSIDDLLAVKEKELME 184


>gi|296110369|ref|YP_003620750.1| ribosome recycling factor [Leuconostoc kimchii IMSNU 11154]
 gi|295831900|gb|ADG39781.1| ribosome recycling factor [Leuconostoc kimchii IMSNU 11154]
          Length = 181

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 123/180 (68%), Gaps = 3/180 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            +L + K RM      L++++ ++RTGR +P +LD ++VE YG+  PLNQVA+++V E R
Sbjct: 3   FNLTDAKARMQGAQDALQRELGSIRTGRANPHILDRIEVEYYGAMTPLNQVASISVPEAR 62

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L+++ +DK ++  + R I+ S+LGLNP  +G ++R+ +P+ TEE R  LVK   A AEK
Sbjct: 63  ILMITPFDKTVLEEIIRAINISDLGLNPASDGNIVRLAIPQMTEEGRKDLVKQVKAEAEK 122

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+SVRN+RRD MD +KK +   +  ED     E+D+QK+TD  IK ID+   +K+KE++
Sbjct: 123 AKVSVRNVRRDAMDSVKKDK---ELPEDDARHAEDDVQKLTDENIKAIDTIASDKEKELL 179


>gi|167837038|ref|ZP_02463921.1| ribosome recycling factor [Burkholderia thailandensis MSMB43]
          Length = 186

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 112/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKGEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K  EIM
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQAKDAEIM 184


>gi|107028804|ref|YP_625899.1| ribosome recycling factor [Burkholderia cenocepacia AU 1054]
 gi|116690037|ref|YP_835660.1| ribosome recycling factor [Burkholderia cenocepacia HI2424]
 gi|170733372|ref|YP_001765319.1| ribosome recycling factor [Burkholderia cenocepacia MC0-3]
 gi|254247886|ref|ZP_04941207.1| Ribosome recycling factor [Burkholderia cenocepacia PC184]
 gi|123070966|sp|Q1BHH9|RRF_BURCA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230415|sp|A0K8E0|RRF_BURCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238688551|sp|B1JUE7|RRF_BURCC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|105897968|gb|ABF80926.1| ribosome recycling factor [Burkholderia cenocepacia AU 1054]
 gi|116648126|gb|ABK08767.1| ribosome recycling factor [Burkholderia cenocepacia HI2424]
 gi|124872662|gb|EAY64378.1| Ribosome recycling factor [Burkholderia cenocepacia PC184]
 gi|169816614|gb|ACA91197.1| ribosome recycling factor [Burkholderia cenocepacia MC0-3]
          Length = 186

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATTGDLIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRASDDVQKLTDKHVAEIDKLVQTKEAEIM 184


>gi|237747788|ref|ZP_04578268.1| ribosome recycling factor [Oxalobacter formigenes OXCC13]
 gi|229379150|gb|EEO29241.1| ribosome recycling factor [Oxalobacter formigenes OXCC13]
          Length = 186

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 114/172 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I  LK D+  +RTGR    +LD V+V+ YGS   ++QVAN+T+L+ R + V  W+
Sbjct: 13  KMNKSIESLKADLAKVRTGRAHTGILDHVEVDYYGSPTKISQVANITLLDARTISVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV ++E+ I +S+LGLNP   G+++R+P P  TEERR  +VK+     E +K++VRNI
Sbjct: 73  KKMVNAIEKAIRDSDLGLNPSTMGEIIRVPTPALTEERRKEMVKLVKTEGEDAKVAVRNI 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + +KK  K  + SED     ++DIQK+TD  ++ ID    +K+KE+M
Sbjct: 133 RRDANEAVKKMVKDKECSEDDERRSQDDIQKLTDKFVQQIDKLLADKEKEVM 184


>gi|15598849|ref|NP_252343.1| ribosome recycling factor [Pseudomonas aeruginosa PAO1]
 gi|107103167|ref|ZP_01367085.1| hypothetical protein PaerPA_01004236 [Pseudomonas aeruginosa PACS2]
 gi|116051650|ref|YP_789511.1| ribosome recycling factor [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890122|ref|YP_002438986.1| ribosome recycling factor [Pseudomonas aeruginosa LESB58]
 gi|254236567|ref|ZP_04929890.1| ribosome recycling factor [Pseudomonas aeruginosa C3719]
 gi|254242350|ref|ZP_04935672.1| ribosome recycling factor [Pseudomonas aeruginosa 2192]
 gi|313109058|ref|ZP_07795030.1| ribosome recycling factor [Pseudomonas aeruginosa 39016]
 gi|6226046|sp|O82853|RRF_PSEAE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122260793|sp|Q02RC5|RRF_PSEAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703267|sp|B7V7G0|RRF_PSEA8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|9949814|gb|AAG07041.1|AE004785_5 ribosome recycling factor [Pseudomonas aeruginosa PAO1]
 gi|3417449|dbj|BAA32345.1| ribosome recycling factor [Pseudomonas aeruginosa]
 gi|115586871|gb|ABJ12886.1| ribosome recycling factor [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126168498|gb|EAZ54009.1| ribosome recycling factor [Pseudomonas aeruginosa C3719]
 gi|126195728|gb|EAZ59791.1| ribosome recycling factor [Pseudomonas aeruginosa 2192]
 gi|218770345|emb|CAW26110.1| ribosome recycling factor [Pseudomonas aeruginosa LESB58]
 gi|310881532|gb|EFQ40126.1| ribosome recycling factor [Pseudomonas aeruginosa 39016]
          Length = 185

 Score =  154 bits (388), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 109/174 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RMG T+  L      +RTGR  PS+LD V V  YG+  PL QVANVTV + R L ++V
Sbjct: 10  QERMGKTLEALGHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVTVEDSRTLALAV 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE++++SVR
Sbjct: 70  FDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRKGYTKQARAEAEQARVSVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRRD +  LK  +K  + SED      +D+QK+TD  I  I+   E K+ ++M
Sbjct: 130 NIRRDALAQLKDLQKEKEISEDEERRAGDDVQKLTDKFIGEIEKALEAKEADLM 183


>gi|167756899|ref|ZP_02429026.1| hypothetical protein CLORAM_02448 [Clostridium ramosum DSM 1402]
 gi|167703074|gb|EDS17653.1| hypothetical protein CLORAM_02448 [Clostridium ramosum DSM 1402]
          Length = 193

 Score =  154 bits (388), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 120/184 (65%), Gaps = 6/184 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N ++D  N  +RM  TI   ++D+ ++RTGR +P+MLD V V  YGS  P+NQ+A ++V
Sbjct: 14  INMILDDTN--ERMTKTIESFQRDLSSVRTGRANPNMLDRVMVNYYGSPTPVNQIAGISV 71

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           +E R LV+  +DK  +  +E GI+E++LGL P  +G+++RI VP  TEERR    K    
Sbjct: 72  VEGRQLVIKPYDKSSIKDIEHGIYEADLGLTPQNDGEIIRIMVPALTEERRKEFAKNVWK 131

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           +AE +K+S+RNIRRD  D +KK+      SED + + +  +QK+TD  +K ID   + K+
Sbjct: 132 FAENAKVSIRNIRRDSNDEIKKT----DGSEDEIKAGQERVQKLTDKFVKEIDEIAKVKE 187

Query: 181 KEIM 184
           K+IM
Sbjct: 188 KDIM 191


>gi|254495059|ref|ZP_05107983.1| Ribosome recycling factor [Polaribacter sp. MED152]
 gi|85819409|gb|EAQ40566.1| Ribosome recycling factor [Polaribacter sp. MED152]
          Length = 184

 Score =  154 bits (388), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 81/186 (43%), Positives = 120/186 (64%), Gaps = 6/186 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  L   K+ MG+ I+ L+K+++++R G+ +P+ML  V V+ YGS  PL+QVANV
Sbjct: 1   MNEEIEFILDTAKEAMGNAITHLEKELVSIRAGKATPAMLSTVMVDYYGSQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R L +  W+K M+  +E+ I  +NLGLNP+  G ++ I VP  TEERR  L K A
Sbjct: 61  NTPDARTLSIQPWEKNMLQPIEKAIQIANLGLNPMNNGDLIMINVPPLTEERRKGLAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE +K+ VRN R+D  + +KK     + S+DM    E+D+QK+TD+ +KNID     
Sbjct: 121 KAEAEHAKVGVRNARKDANNDIKKV----EISDDMKKIAEDDVQKLTDTYVKNIDEKLAV 176

Query: 179 KKKEIM 184
           K+KEIM
Sbjct: 177 KEKEIM 182


>gi|254179324|ref|ZP_04885923.1| ribosome recycling factor [Burkholderia pseudomallei 1655]
 gi|184209864|gb|EDU06907.1| ribosome recycling factor [Burkholderia pseudomallei 1655]
          Length = 186

 Score =  154 bits (388), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++ +M  +I   + D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KSVEQKMQRSIEAFRNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKTMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K  EIM
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRASDDVQKLTDKHVAEIDKLVQAKDAEIM 184


>gi|225570389|ref|ZP_03779414.1| hypothetical protein CLOHYLEM_06489 [Clostridium hylemonae DSM
           15053]
 gi|225160760|gb|EEG73379.1| hypothetical protein CLOHYLEM_06489 [Clostridium hylemonae DSM
           15053]
          Length = 183

 Score =  154 bits (388), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 113/173 (65%), Gaps = 1/173 (0%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           D+M  TI+ L+ ++  +R GR +P++L+ + V  YG+  P+ QVANV+V E RM+ +  W
Sbjct: 10  DKMNKTIASLEGELAAIRAGRANPNVLNKIMVNYYGTPTPIQQVANVSVPEARMIHIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K MV  +E+ I  S+LG+NP  +G  +R+  PE TEERR  L K      E +K+++RN
Sbjct: 70  EKSMVKEIEKAIMTSDLGINPTNDGSAIRLAFPELTEERRKELAKDVKKKGENAKVAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRDG D LKK + S + SED +  LE+++QK+TD  IK +D   E K KE+M
Sbjct: 130 IRRDGNDTLKKLKGS-EVSEDEIKDLEDELQKLTDKFIKEVDKAVEAKSKEVM 181


>gi|78485626|ref|YP_391551.1| ribosome recycling factor [Thiomicrospira crunogena XCL-2]
 gi|123555416|sp|Q31G46|RRF_THICR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78363912|gb|ABB41877.1| ribosome recycling factor [Thiomicrospira crunogena XCL-2]
          Length = 185

 Score =  154 bits (388), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 117/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           ++++ D  N  DRM  ++  L+ +   +RTGR  PS+LD VKV+ YGS VP++QVANV V
Sbjct: 2   IDEIFDDAN--DRMTKSVENLESNFAKIRTGRAHPSILDAVKVDYYGSEVPVSQVANVNV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V  W++ MV+ VE+ I  S++G+NP+  G V+RIP+P  TEERR   +K+A +
Sbjct: 60  EDARTLTVQPWEQSMVSVVEKAIMTSDIGVNPVTTGNVMRIPMPPLTEERRKEFIKLAKS 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++K+++RNIRRD     K   K  + ++D +   E  IQK TD  +  +D    +K+
Sbjct: 120 EAEQTKVAIRNIRRDANADFKNLNKDKEITDDELRQAEEQIQKATDEHVSQVDQMLAKKE 179

Query: 181 KEIMHF 186
           + +M  
Sbjct: 180 ESLMEI 185


>gi|16803354|ref|NP_464839.1| ribosome recycling factor [Listeria monocytogenes EGD-e]
 gi|46907540|ref|YP_013929.1| ribosome recycling factor [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47094294|ref|ZP_00231999.1| ribosome recycling factor [Listeria monocytogenes str. 4b H7858]
 gi|47096939|ref|ZP_00234516.1| ribosome recycling factor [Listeria monocytogenes str. 1/2a F6854]
 gi|224501742|ref|ZP_03670049.1| ribosome recycling factor [Listeria monocytogenes FSL R2-561]
 gi|226223915|ref|YP_002758022.1| ribosome recycling factor [Listeria monocytogenes Clip81459]
 gi|254824627|ref|ZP_05229628.1| ribosome recycling factor [Listeria monocytogenes FSL J1-194]
 gi|254828675|ref|ZP_05233362.1| ribosome recycling factor [Listeria monocytogenes FSL N3-165]
 gi|254829929|ref|ZP_05234584.1| ribosome recycling factor [Listeria monocytogenes 10403S]
 gi|254852635|ref|ZP_05241983.1| ribosome recycling factor [Listeria monocytogenes FSL R2-503]
 gi|254898521|ref|ZP_05258445.1| ribosome recycling factor [Listeria monocytogenes J0161]
 gi|254911988|ref|ZP_05262000.1| ribosome recycling factor [Listeria monocytogenes J2818]
 gi|254932371|ref|ZP_05265730.1| ribosome recycling factor [Listeria monocytogenes HPB2262]
 gi|254936315|ref|ZP_05268012.1| ribosome recycling factor [Listeria monocytogenes F6900]
 gi|254992874|ref|ZP_05275064.1| ribosome recycling factor [Listeria monocytogenes FSL J2-064]
 gi|255026995|ref|ZP_05298981.1| ribosome recycling factor [Listeria monocytogenes FSL J2-003]
 gi|255522289|ref|ZP_05389526.1| ribosome recycling factor [Listeria monocytogenes FSL J1-175]
 gi|284801699|ref|YP_003413564.1| hypothetical protein LM5578_1453 [Listeria monocytogenes 08-5578]
 gi|284994841|ref|YP_003416609.1| hypothetical protein LM5923_1406 [Listeria monocytogenes 08-5923]
 gi|300765446|ref|ZP_07075428.1| ribosome recycling factor [Listeria monocytogenes FSL N1-017]
 gi|22001941|sp|Q8Y7G7|RRF_LISMO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390258|sp|Q720A8|RRF_LISMF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|259494548|sp|C1L2M0|RRF_LISMC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|16410730|emb|CAC99392.1| frr [Listeria monocytogenes EGD-e]
 gi|46880808|gb|AAT04106.1| ribosome recycling factor [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47014699|gb|EAL05655.1| ribosome recycling factor [Listeria monocytogenes str. 1/2a F6854]
 gi|47017338|gb|EAL08166.1| ribosome recycling factor [Listeria monocytogenes str. 4b H7858]
 gi|225876377|emb|CAS05086.1| Putative ribosome recycling factor [Listeria monocytogenes serotype
           4b str. CLIP 80459]
 gi|258601078|gb|EEW14403.1| ribosome recycling factor [Listeria monocytogenes FSL N3-165]
 gi|258605951|gb|EEW18559.1| ribosome recycling factor [Listeria monocytogenes FSL R2-503]
 gi|258608905|gb|EEW21513.1| ribosome recycling factor [Listeria monocytogenes F6900]
 gi|284057261|gb|ADB68202.1| hypothetical protein LM5578_1453 [Listeria monocytogenes 08-5578]
 gi|284060308|gb|ADB71247.1| hypothetical protein LM5923_1406 [Listeria monocytogenes 08-5923]
 gi|293583927|gb|EFF95959.1| ribosome recycling factor [Listeria monocytogenes HPB2262]
 gi|293589952|gb|EFF98286.1| ribosome recycling factor [Listeria monocytogenes J2818]
 gi|293593865|gb|EFG01626.1| ribosome recycling factor [Listeria monocytogenes FSL J1-194]
 gi|300513883|gb|EFK40948.1| ribosome recycling factor [Listeria monocytogenes FSL N1-017]
 gi|328468599|gb|EGF39599.1| ribosome recycling factor [Listeria monocytogenes 1816]
 gi|328475037|gb|EGF45825.1| ribosome recycling factor [Listeria monocytogenes 220]
 gi|332311757|gb|EGJ24852.1| Ribosome-recycling factor [Listeria monocytogenes str. Scott A]
          Length = 185

 Score =  154 bits (388), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 185


>gi|299144039|ref|ZP_07037119.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518524|gb|EFI42263.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 185

 Score =  153 bits (387), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +++M  TIS  ++D+ ++R GR +PS+LD + V+ YG   PLNQVA ++  EPR+L 
Sbjct: 7   KDAEEKMKKTISVYREDLQSIRAGRANPSLLDKITVDYYGQATPLNQVAGISAPEPRLLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WD  ++ ++E+ I +S LG+ P  +G+++R+ +P  TEERR  L K+     E +K+
Sbjct: 67  ITPWDASLIPAIEKAILKSELGITPSNDGKIVRLLIPHLTEERRKELTKIVRKNGENAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D +KK  KS + SED     E  IQK+TD  I+ +D   + K+ E+M  
Sbjct: 127 AIRNIRRDSIDEVKKLEKSKEISEDDRKDGEEQIQKLTDKYIEELDKITKSKEDELMEI 185


>gi|167563185|ref|ZP_02356101.1| ribosome recycling factor [Burkholderia oklahomensis EO147]
 gi|167570368|ref|ZP_02363242.1| ribosome recycling factor [Burkholderia oklahomensis C6786]
          Length = 186

 Score =  153 bits (387), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHAGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQSKEAEIM 184


>gi|228992552|ref|ZP_04152479.1| Ribosome-recycling factor [Bacillus pseudomycoides DSM 12442]
 gi|228767186|gb|EEM15822.1| Ribosome-recycling factor [Bacillus pseudomycoides DSM 12442]
          Length = 185

 Score =  153 bits (387), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++M   ++   +++ ++R GR S S LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKATNEKMEKAVAAYSRELASVRAGRASASALDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVK    YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRDLVKTVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD  D LKK  K+G  +ED +     DIQK TD  I  +D   + K+KEIM 
Sbjct: 126 VAVRNVRRDANDDLKKLEKAGDITEDDLRGYTEDIQKETDKYIAKVDEITKNKEKEIME 184


>gi|228998600|ref|ZP_04158187.1| Ribosome-recycling factor [Bacillus mycoides Rock3-17]
 gi|229006100|ref|ZP_04163788.1| Ribosome-recycling factor [Bacillus mycoides Rock1-4]
 gi|228755176|gb|EEM04533.1| Ribosome-recycling factor [Bacillus mycoides Rock1-4]
 gi|228761068|gb|EEM10027.1| Ribosome-recycling factor [Bacillus mycoides Rock3-17]
          Length = 185

 Score =  153 bits (387), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++M   ++   +++ ++R GR S S LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKAANEKMEKAVAAYSRELASVRAGRASASALDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVK    YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRDLVKTVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD  D LKK  K+G  +ED +     DIQK TD  I  +D   + K+KEIM 
Sbjct: 126 VAVRNVRRDANDDLKKLEKAGDITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIME 184


>gi|22537655|ref|NP_688506.1| ribosome recycling factor [Streptococcus agalactiae 2603V/R]
 gi|25011612|ref|NP_736007.1| ribosome recycling factor [Streptococcus agalactiae NEM316]
 gi|76788564|ref|YP_330142.1| ribosome recycling factor [Streptococcus agalactiae A909]
 gi|76799120|ref|ZP_00781307.1| ribosome recycling factor [Streptococcus agalactiae 18RS21]
 gi|77405174|ref|ZP_00782272.1| ribosome recycling factor [Streptococcus agalactiae H36B]
 gi|77411699|ref|ZP_00788038.1| ribosome recycling factor [Streptococcus agalactiae CJB111]
 gi|77413972|ref|ZP_00790145.1| ribosome recycling factor [Streptococcus agalactiae 515]
 gi|54039298|sp|P66741|RRF_STRA5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|54042006|sp|P66740|RRF_STRA3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123601478|sp|Q3K011|RRF_STRA1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|22534542|gb|AAN00379.1|AE014261_7 ribosome recycling factor [Streptococcus agalactiae 2603V/R]
 gi|24413152|emb|CAD47230.1| ribosome recycling factor [Streptococcus agalactiae NEM316]
 gi|76563621|gb|ABA46205.1| ribosome recycling factor [Streptococcus agalactiae A909]
 gi|76585524|gb|EAO62095.1| ribosome recycling factor [Streptococcus agalactiae 18RS21]
 gi|77159952|gb|EAO71090.1| ribosome recycling factor [Streptococcus agalactiae 515]
 gi|77162271|gb|EAO73243.1| ribosome recycling factor [Streptococcus agalactiae CJB111]
 gi|77176176|gb|EAO78947.1| ribosome recycling factor [Streptococcus agalactiae H36B]
 gi|319745486|gb|EFV97790.1| ribosome recycling factor [Streptococcus agalactiae ATCC 13813]
          Length = 185

 Score =  153 bits (387), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 114/175 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++R   +   L ++   +R GR + S+LD ++VE YG+  PLNQ+A++TV E R+L++S 
Sbjct: 10  QERFEQSHQSLSREFAGIRAGRANASLLDRIQVEYYGAPTPLNQLASITVPEARVLLISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +KI++R
Sbjct: 70  FDKSSIKDIERAINESDLGINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD MD  KK  K+ + +ED + SLE DIQK TD  +K+ID     K+KE++ 
Sbjct: 130 NIRRDAMDEAKKQEKNKEITEDDLKSLEKDIQKATDDAVKHIDEMTANKEKELLE 184


>gi|313623929|gb|EFR94035.1| ribosome recycling factor [Listeria innocua FSL J1-023]
          Length = 185

 Score =  153 bits (387), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 185


>gi|296101340|ref|YP_003611486.1| ribosome releasing factor [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055799|gb|ADF60537.1| ribosome releasing factor [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 185

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFKTQISKIRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDTRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RSMGPAVEKAIMASDLGLNPSSAGADIRVPLPPLTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++DIQK+TD+ IK ID+   +K+ E+M F
Sbjct: 132 RRDANDKVKALLKEKEISEDDDRRSQDDIQKMTDAAIKKIDAALADKEAELMQF 185


>gi|291547840|emb|CBL20948.1| ribosome recycling factor [Ruminococcus sp. SR1/5]
          Length = 183

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 115/178 (64%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +MG T++ L+ ++ T+R GR +P +LD + V+ YG+  PL QVAN++V E RM+
Sbjct: 5   IQVYETKMGKTLNALESELTTIRAGRANPHILDKLTVDYYGAPTPLQQVANISVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  M+ ++E+ I  S+LGLNP  +G+++R+  PE TEERR  LVK      E +K
Sbjct: 65  QIQPWESSMIKAIEKAILCSDLGLNPSNDGKMIRLVFPELTEERRKELVKDVKKKGEGAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD  D  KK  K    SED +  LE+ IQK+TD  IK +D   E K KEI+
Sbjct: 125 VAVRNIRRDANDAFKKLAKQD-VSEDEIKELEDQIQKLTDKYIKEVDKAIENKSKEIL 181


>gi|126654121|ref|ZP_01725939.1| Frr [Bacillus sp. B14905]
 gi|126589401|gb|EAZ83551.1| Frr [Bacillus sp. B14905]
          Length = 185

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 120/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  KD+M  TI+   +++ ++R GR + S+LD + V+ YG+  P+NQ+A V+V E R+L
Sbjct: 6   LEQAKDKMNKTIAAFTRELSSIRAGRANASLLDRIMVDYYGAPTPINQLAGVSVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK ++  +E+ I +S++G+ P  +G ++R+ +P  TEERR  LVK     AE +K
Sbjct: 66  VITPYDKTILGEIEKAIMKSDIGITPTNDGSIIRLMIPALTEERRKDLVKQVKKEAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RRD  D LKK  K+G+ +ED +    +DIQK+TD  I  +D   ++K+KEI+ 
Sbjct: 126 IAVRNVRRDANDDLKKLEKAGEITEDDLRGYGDDIQKLTDEFIVKVDQVTKDKEKEILE 184


>gi|320547289|ref|ZP_08041581.1| ribosome recycling factor [Streptococcus equinus ATCC 9812]
 gi|320448093|gb|EFW88844.1| ribosome recycling factor [Streptococcus equinus ATCC 9812]
          Length = 185

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   + S L ++  ++R GR + S+LD ++VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFEQSHSSLAREFASIRAGRANASLLDRIQVEYYGAMTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +E  I+ S+LG+NP  +G V+R+ +P  TEE R AL K      E +K
Sbjct: 66  LISPFDKSSLKDIEHAINASDLGINPANDGSVIRLVIPALTEETRKALAKDVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD MD  KK  K+ + +ED +  LE DIQK TD  +K+ID+    K+KE++ 
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKVLEKDIQKATDEAVKHIDTMTANKEKELLE 184


>gi|297588384|ref|ZP_06947027.1| ribosome recycling factor [Finegoldia magna ATCC 53516]
 gi|297573757|gb|EFH92478.1| ribosome recycling factor [Finegoldia magna ATCC 53516]
          Length = 185

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++++ +   T+  L++++ T+R GR +PS+LD + V+ YG+  PL QVA ++  E R+L
Sbjct: 6   LKDMEAKADKTLHALREELKTVRAGRANPSILDNIMVDYYGTSTPLKQVATISAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK ++  +E+ I  SNLG+ P  +G ++R+P P+ TE+RR  L KV   Y EKSK
Sbjct: 66  TIQPWDKSIMKEIEKQIQASNLGITPSNDGSIIRLPFPQLTEDRRKELTKVVKEYGEKSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD +D  KK  K+ + SED +  L +DIQ +TD   K ID+   +K+ E+M  
Sbjct: 126 VTIRSIRRDFVDDAKKMEKNAEISEDELHVLLDDIQSLTDKLTKEIDNIVTDKETELMEI 185


>gi|28210950|ref|NP_781894.1| ribosome recycling factor [Clostridium tetani E88]
 gi|34924948|sp|Q895K9|RRF_CLOTE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|28203389|gb|AAO35831.1| ribosome recycling factor [Clostridium tetani E88]
          Length = 183

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 115/175 (65%), Gaps = 2/175 (1%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           D+M   +  LKKD+ +L+ GR +P+MLD ++ E YG+  PL+Q+AN++V E R+L +  W
Sbjct: 11  DKMSKALLALKKDLASLKAGRANPAMLDKIEAEYYGTMTPLSQLANISVPEARILQIQPW 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  + ++E+ I  S+LGLNP  +G ++R+ +PE TEE R  +VK    Y E +KI++R+
Sbjct: 71  DKSSLKAIEKAILVSDLGLNPNNDGTIIRLIIPELTEETRRNIVKTVKKYGEDTKIAIRS 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RRDG D +K  +     SED +   E +IQKITD+ +K +D   + K+KEIM  
Sbjct: 131 VRRDGNDKIKDLK--SDMSEDDIKKAEEEIQKITDNYVKKVDEMIDIKEKEIMSI 183


>gi|251810690|ref|ZP_04825163.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876309|ref|ZP_06285176.1| ribosome recycling factor [Staphylococcus epidermidis SK135]
 gi|251805850|gb|EES58507.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295334|gb|EFA87861.1| ribosome recycling factor [Staphylococcus epidermidis SK135]
          Length = 184

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+L
Sbjct: 5   IKDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K
Sbjct: 65  VISPYDKSSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKKIGEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD++IK ID    +K+K+I+  
Sbjct: 125 VSIRNIRRDINDQLKKDEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVADKEKDIISV 184


>gi|237734608|ref|ZP_04565089.1| flagellar biosynthetic protein flhB [Mollicutes bacterium D7]
 gi|229382428|gb|EEO32519.1| flagellar biosynthetic protein flhB [Coprobacillus sp. D7]
          Length = 181

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 78/184 (42%), Positives = 120/184 (65%), Gaps = 6/184 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N ++D  N  +RM  TI   ++D+ ++RTGR +P+MLD V V  YGS  P+NQ+A ++V
Sbjct: 2   INMILDDTN--ERMTKTIESFQRDLSSVRTGRANPNMLDRVMVNYYGSPTPVNQIAGISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           +E R LV+  +DK  +  +E GI+E++LGL P  +G+++RI VP  TEERR    K    
Sbjct: 60  VEGRQLVIKPYDKSSIKDIEHGIYEADLGLTPQNDGEIIRIMVPALTEERRKEFAKNVWK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           +AE +K+S+RNIRRD  D +KK+      SED + + +  +QK+TD  +K ID   + K+
Sbjct: 120 FAENAKVSIRNIRRDSNDEIKKT----DGSEDEIKAGQERVQKLTDKFVKEIDEIAKVKE 175

Query: 181 KEIM 184
           K+IM
Sbjct: 176 KDIM 179


>gi|253700113|ref|YP_003021302.1| ribosome recycling factor [Geobacter sp. M21]
 gi|259494543|sp|C6E515|RRF_GEOSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|251774963|gb|ACT17544.1| ribosome recycling factor [Geobacter sp. M21]
          Length = 185

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N+   MG +I  L+K+   +RTGR + S+LD +K+++YG+  PLNQVA + + E R +
Sbjct: 6   ISNMNVHMGKSIESLRKEYQKVRTGRATTSLLDDIKIDSYGTLSPLNQVATLAIPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S WD +M+A +E+ I  SNLGLNP  +G+++R+ +P  TEERR  +VK     AE++K
Sbjct: 66  TISPWDSKMIAPIEKAIMNSNLGLNPANDGKMIRLVLPPLTEERRKDIVKQLKRDAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +D LKK  K    SED +   E D+Q  T+S +  +D     K+KE+M  
Sbjct: 126 VALRNIRRDAIDQLKKLEKDKSISEDELKRAEKDVQDSTNSHVAKVDEVLLHKEKEVMEV 185


>gi|260596592|ref|YP_003209163.1| ribosome recycling factor [Cronobacter turicensis z3032]
 gi|260215769|emb|CBA28183.1| Ribosome-recycling factor [Cronobacter turicensis z3032]
          Length = 185

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+ANVTV + R L ++V+D
Sbjct: 12  RMDKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLANVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE++++++RN+
Sbjct: 72  RSMSPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLIKVVRGEAEQARVAIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  +  ED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 132 RRDANDKVKALLKDKEIGEDEDRRSQDDVQKMTDAAIKKVDAALADKEAELMQF 185


>gi|115352100|ref|YP_773939.1| ribosome recycling factor [Burkholderia ambifaria AMMD]
 gi|170699876|ref|ZP_02890906.1| ribosome recycling factor [Burkholderia ambifaria IOP40-10]
 gi|171318103|ref|ZP_02907272.1| ribosome recycling factor [Burkholderia ambifaria MEX-5]
 gi|172060964|ref|YP_001808616.1| ribosome recycling factor [Burkholderia ambifaria MC40-6]
 gi|122322843|sp|Q0BE18|RRF_BURCM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689163|sp|B1YS71|RRF_BURA4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|115282088|gb|ABI87605.1| ribosome recycling factor [Burkholderia ambifaria AMMD]
 gi|170135198|gb|EDT03496.1| ribosome recycling factor [Burkholderia ambifaria IOP40-10]
 gi|171096727|gb|EDT41612.1| ribosome recycling factor [Burkholderia ambifaria MEX-5]
 gi|171993481|gb|ACB64400.1| ribosome recycling factor [Burkholderia ambifaria MC40-6]
          Length = 186

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  +D   + K+ EIM
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRASDDVQKLTDKHVAEVDKLVQSKEAEIM 184


>gi|302038069|ref|YP_003798391.1| ribosome recycling factor [Candidatus Nitrospira defluvii]
 gi|300606133|emb|CBK42466.1| Ribosome recycling factor [Candidatus Nitrospira defluvii]
          Length = 187

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 115/178 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q + ++M   I  LK+D+  LRTGR S +++D ++V+ YG+  PL QVANV   E R++ 
Sbjct: 9   QRVTEKMDHAIEHLKRDLAGLRTGRASVALVDGIRVDYYGTMTPLKQVANVATPEARLIT 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  W++ ++  +E+ I  S+LGL P  +G+++RIP+P  TEERR  L+KV   + E+ K+
Sbjct: 69  IQPWEQNLIREIEKAIQTSDLGLTPSNDGKLIRIPLPPLTEERRKELIKVCKKHGEEVKV 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            +R  RRDG + LKK +K  K +ED +   E +IQK+TD  ++ ID   ++K+ EI+ 
Sbjct: 129 QIRGFRRDGNEELKKLQKDTKLTEDELRKSEAEIQKLTDQYVQKIDDVMKKKEGEILE 186


>gi|295110296|emb|CBL24249.1| ribosome recycling factor [Ruminococcus obeum A2-162]
          Length = 183

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 116/178 (65%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +M  T++  ++++ T+R GR +P +LD + V+ YGS  PL QVAN+TV E RM+
Sbjct: 5   VQKYEQKMTKTLNGFEEELTTIRAGRANPHILDKITVDYYGSPTPLQQVANITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++ S+E+ I  S+LGLNP  +G+++R+ +PE TEERR  LVK      E +K
Sbjct: 65  QIQPWESSLIKSIEKAILTSDLGLNPSNDGKLIRLVLPELTEERRKELVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD  D  KK  K    SED +  LE+ +QK+TD  IK ID+  + K KEI+
Sbjct: 125 VAVRNIRRDANDAFKKLTKQD-VSEDEIKDLEDSVQKLTDKFIKKIDAAVDTKAKEIL 181


>gi|289550950|ref|YP_003471854.1| Ribosome recycling factor [Staphylococcus lugdunensis HKU09-01]
 gi|315658452|ref|ZP_07911324.1| ribosome recycling factor [Staphylococcus lugdunensis M23590]
 gi|289180482|gb|ADC87727.1| Ribosome recycling factor [Staphylococcus lugdunensis HKU09-01]
 gi|315496781|gb|EFU85104.1| ribosome recycling factor [Staphylococcus lugdunensis M23590]
          Length = 184

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+L
Sbjct: 5   IKDTKARMNKSIENLSRELANINAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK  V  +ER I  +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K
Sbjct: 65  VISPYDKTSVKDIERAIIAANLGVNPTSDGEVIRITVPALTEERRKELVKDVKKVGEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD +IK ID    +K+K+IM  
Sbjct: 125 VSIRNIRRDINDQLKKDEKNGDITEDDLRSQSDDVQKATDDSIKEIDQLVGDKEKDIMSV 184


>gi|134296025|ref|YP_001119760.1| ribosome recycling factor [Burkholderia vietnamiensis G4]
 gi|166230770|sp|A4JF72|RRF_BURVG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|134139182|gb|ABO54925.1| ribosome recycling factor [Burkholderia vietnamiensis G4]
          Length = 186

 Score =  153 bits (387), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATSGDLIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  +D   + K+ EIM
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRASDDVQKLTDKHVAEVDKLVQTKEAEIM 184


>gi|300173184|ref|YP_003772350.1| ribosome Recycling Factor, RRF [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887563|emb|CBL91531.1| Ribosome Recycling Factor, RRF [Leuconostoc gasicomitatum LMG
           18811]
          Length = 181

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 121/181 (66%), Gaps = 3/181 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
             +L + K RM      LK+++ ++RTGR +P +LD ++VE YG+  PL QVA+++V E 
Sbjct: 2   AFNLTDAKTRMQGAQDALKRELGSIRTGRANPHILDRIEVEYYGAMTPLKQVASISVPEA 61

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R+L+++ +DK  +  + R I+ S+LGLNP  +G ++R+ +P+ TEE R  L K   A AE
Sbjct: 62  RILLITPFDKSALEEIVRAINMSDLGLNPASDGNIVRLAIPQMTEEGRKDLAKQVKAEAE 121

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K+K+S+RN+RRD MD +KK +   +  ED V + E+D+QK+TD  IK ID    EK+KE+
Sbjct: 122 KAKVSIRNVRRDAMDTVKKDK---ELPEDDVRNAEDDVQKLTDDNIKAIDVIAAEKEKEL 178

Query: 184 M 184
           +
Sbjct: 179 L 179


>gi|53805188|ref|YP_113089.1| ribosome recycling factor [Methylococcus capsulatus str. Bath]
 gi|60390238|sp|Q60BA7|RRF_METCA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|53758949|gb|AAU93240.1| ribosome recycling factor [Methylococcus capsulatus str. Bath]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 109/173 (63%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  +I  LK +   +RTGR  PS+L+ ++V  YG+ VPL QVANV V + R L V+ W
Sbjct: 11  ERMQKSIEALKHEFAKIRTGRAHPSLLEHIRVSYYGNEVPLTQVANVAVEDARSLAVTPW 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           ++ MV ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE  ++++RN
Sbjct: 71  ERNMVQAIEKAIMTSDLGLNPSTAGTVIRVPLPPLTEERRRDLIKVVRQEAENGRVAIRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRD  + LK + K    SED     +  IQK TD  IK ID   E+K+ +++
Sbjct: 131 IRRDANNELKAALKEKLISEDEDRRSQEQIQKTTDQFIKEIDKLLEQKEADLL 183


>gi|260767822|ref|ZP_05876757.1| ribosome recycling factor [Vibrio furnissii CIP 102972]
 gi|260617331|gb|EEX42515.1| ribosome recycling factor [Vibrio furnissii CIP 102972]
 gi|315179348|gb|ADT86262.1| ribosome recycling factor [Vibrio furnissii NCTC 11218]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQ+ANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLQKVRTGRAHPSLLSGLSVEYYGAATPLNQIANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAILMSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     + +IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANSDLKALLKDKEISEDDDRKAQEEIQKLTDIAVKRIDDVLAAKEKELMEV 185


>gi|238026905|ref|YP_002911136.1| ribosome recycling factor [Burkholderia glumae BGR1]
 gi|237876099|gb|ACR28432.1| Ribosome releasing factor [Burkholderia glumae BGR1]
          Length = 186

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I ES+LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKPMVAKVEKAIRESDLGLNPATSGDMIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + LKK  K  + SED      +++QK+TD  +  ID   + K  EIM
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRASDEVQKLTDKHVAEIDKLVQAKDAEIM 184


>gi|323526485|ref|YP_004228638.1| ribosome recycling factor [Burkholderia sp. CCGE1001]
 gi|323383487|gb|ADX55578.1| ribosome recycling factor [Burkholderia sp. CCGE1001]
          Length = 186

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + V  W+
Sbjct: 13  KMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIGVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV  VE+ I ES+LGLNP  +G V+R+P+P  TEERR  L KV  + AE +K++VRN+
Sbjct: 73  KKMVQVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM
Sbjct: 133 RRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVATKEAEIM 184


>gi|187935220|ref|YP_001885459.1| ribosome recycling factor [Clostridium botulinum B str. Eklund 17B]
 gi|238691618|sp|B2TJ43|RRF_CLOBB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|187723373|gb|ACD24594.1| ribosome recycling factor [Clostridium botulinum B str. Eklund 17B]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 126/180 (70%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++N +++M  T++ LK ++ T++ GR +PSMLD ++++ YGS  PL+Q AN++  EPR+L
Sbjct: 6   IKNAEEKMQKTVTVLKSELGTMKAGRANPSMLDKIQIDYYGSMCPLSQAANISSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K+++  +E+ I +S+LGLNP  +G ++R+ +PE TEE R  LVK      E+SK
Sbjct: 66  MITPWEKQLLKEIEKAILKSDLGLNPSNDGSIIRLVIPELTEETRKDLVKKVKKTGEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K G  SED V   E+D+QK TD+ IK+ID    +K+KEI+  
Sbjct: 126 VAIRSIRRDANDKIKALKKDGDLSEDQVKKGEDDVQKKTDAIIKDIDKIIVDKEKEILAI 185


>gi|152987346|ref|YP_001346870.1| ribosome recycling factor [Pseudomonas aeruginosa PA7]
 gi|166230818|sp|A6V1D5|RRF_PSEA7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|150962504|gb|ABR84529.1| ribosome recycling factor [Pseudomonas aeruginosa PA7]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 109/174 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RMG T+  L      +RTGR  PS+LD V V  YG+  PL QVANVTV + R L ++V
Sbjct: 10  QERMGKTLEALGHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVTVEDSRTLALAV 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE++++SVR
Sbjct: 70  FDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRKGYTKQARAEAEQARVSVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRRD +  LK  +K  + SED      +D+QK+TD  I  I+   E K+ ++M
Sbjct: 130 NIRRDALAQLKDLQKEKEISEDDERRAGDDVQKLTDKFIGEIEKALEAKEADLM 183


>gi|307822433|ref|ZP_07652665.1| ribosome recycling factor [Methylobacter tundripaludum SV96]
 gi|307736999|gb|EFO07844.1| ribosome recycling factor [Methylobacter tundripaludum SV96]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+   RM  +I  LK +   +RTGR  PS+LD + V  YG+   L+QVAN+ V + R L 
Sbjct: 7   QDASTRMSKSIEALKHEFSKIRTGRAHPSLLDQINVSYYGTESSLSQVANIAVEDARTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K MV ++E+ I +S+LGLNP   G V+RIP+P  TEERR +LVKV    AE  ++
Sbjct: 67  ITPWEKGMVQAIEKAIMKSDLGLNPATNGMVIRIPLPPLTEERRRSLVKVVKNEAENGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K++ K    SED   + E  IQK+TD  +K+++   E K+ +++  
Sbjct: 127 AIRNIRRDANSAIKEALKEKMISEDEARAAEEKIQKLTDQYVKDVEKLLEAKEADLLSM 185


>gi|317046985|ref|YP_004114633.1| ribosome recycling factor [Pantoea sp. At-9b]
 gi|316948602|gb|ADU68077.1| ribosome recycling factor [Pantoea sp. At-9b]
          Length = 216

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 43  RMDKCVEAFKNTISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 102

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ ++SVRN+
Sbjct: 103 RSLGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLIKIVRGEAEQGRVSVRNV 162

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     +++IQK+TD  IKN+D+   EK+KE+M F
Sbjct: 163 RRDANDKIKALLKDKEISEDDERRAQDEIQKMTDVRIKNVDAALAEKEKELMEF 216


>gi|251793255|ref|YP_003007983.1| ribosome recycling factor [Aggregatibacter aphrophilus NJ8700]
 gi|247534650|gb|ACS97896.1| ribosome recycling factor [Aggregatibacter aphrophilus NJ8700]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 118/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ+   Q+ ++RM  ++  LK  +  +RTGR  PS+LD ++V+ YGS  PL Q+ANV  
Sbjct: 2   INQI--RQDAEERMEKSLEALKGHIAKIRTGRAQPSLLDAIQVDYYGSATPLRQLANVVA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  A
Sbjct: 60  EDARTLAVTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ K+++RN+RRD  D +K   K  + SE+     E  IQK+TD  IK +D    +K+
Sbjct: 120 EGEQGKVAIRNVRRDANDKIKALLKDKEISENDQHKAEEVIQKLTDGFIKEVDDVLADKE 179

Query: 181 KEIMHF 186
           KE++ F
Sbjct: 180 KELLDF 185


>gi|222529797|ref|YP_002573679.1| ribosome recycling factor [Caldicellulosiruptor bescii DSM 6725]
 gi|312127157|ref|YP_003992031.1| ribosome recycling factor [Caldicellulosiruptor hydrothermalis 108]
 gi|312621978|ref|YP_004023591.1| ribosome recycling factor [Caldicellulosiruptor kronotskyensis
           2002]
 gi|254809487|sp|B9MKP8|RRF_ANATD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|222456644|gb|ACM60906.1| ribosome recycling factor [Caldicellulosiruptor bescii DSM 6725]
 gi|311777176|gb|ADQ06662.1| ribosome recycling factor [Caldicellulosiruptor hydrothermalis 108]
 gi|312202445|gb|ADQ45772.1| ribosome recycling factor [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 184

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M   I  LK++  T+R GR +P +LD V V+ YG   P+ QVA++TV E RM+
Sbjct: 5   IQVAEEKMKKAIETLKEEFATIRAGRANPHILDKVMVDYYGVPTPIPQVASITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W+  M+  +E+ I +S+LG+NP  +G+V+R+  PE TEERR  LVK     AE +K
Sbjct: 65  VIQPWEARMLKEIEKAIQKSDLGVNPTNDGKVIRLIFPELTEERRKELVKQVKKMAEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRR+ +D  KK +K+ + +ED +   E D+QK+ D  I+ I+     K+KEIM 
Sbjct: 125 VAIRNIRREALDEYKKMKKNNEITEDDLKDAEEDVQKLHDKYIEQIEKLLSAKEKEIME 183


>gi|255325237|ref|ZP_05366343.1| ribosome recycling factor [Corynebacterium tuberculostearicum
           SK141]
 gi|311739711|ref|ZP_07713546.1| ribosome recycling factor [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|255297802|gb|EET77113.1| ribosome recycling factor [Corynebacterium tuberculostearicum
           SK141]
 gi|311305527|gb|EFQ81595.1| ribosome recycling factor [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 115/175 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++ M  ++   ++ ++T+RTGR +P+M + +  E YG   P+ Q+A ++V EPRML++  
Sbjct: 10  EEHMTASVEHTREQLVTIRTGRANPTMFNGLVAEYYGVPTPITQMATISVPEPRMLLIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +++ M+  +E  I  S+LG+NP  +GQVLR+ VP+ TEERR  +VK+A +  E  KI++R
Sbjct: 70  YEQSMIHEIENSIRNSDLGVNPTNDGQVLRVTVPQLTEERRKEMVKLAKSKGEDGKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR  M+ LKK +K G A ED V + E +++KIT   I+ +D   E K+ E+M 
Sbjct: 130 NIRRKAMEQLKKLQKDGDAGEDEVIAAEKEMEKITSGYIEQVDKLVENKENELME 184


>gi|270160174|ref|ZP_06188830.1| ribosome recycling factor [Legionella longbeachae D-4968]
 gi|289165053|ref|YP_003455191.1| Ribosome recycling factor [Legionella longbeachae NSW150]
 gi|269988513|gb|EEZ94768.1| ribosome recycling factor [Legionella longbeachae D-4968]
 gi|288858226|emb|CBJ12094.1| Ribosome recycling factor [Legionella longbeachae NSW150]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  TI  L+ DM  +RTGR +  +LD V+V+ YG+  PL+QVANVT  + R ++
Sbjct: 7   QDSERRMKKTIEALRIDMSKIRTGRANVGLLDHVQVDYYGNLTPLSQVANVTASDSRTIL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K MV+++E+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ K+
Sbjct: 67  VTPWEKSMVSAIEKAILTSDLGLNPATTGNAIRVPMPPLTEERRKELIKVVRNEAEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  + LK   K    SED        IQK+TD  I  +D+   EK+K++M  
Sbjct: 127 SIRNIRRDANNQLKDLVKDKSISEDDERRAAEAIQKLTDKYILEVDALLAEKEKDLMEV 185


>gi|104783192|ref|YP_609690.1| ribosome recycling factor [Pseudomonas entomophila L48]
 gi|122402174|sp|Q1I629|RRF_PSEE4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|95112179|emb|CAK16906.1| ribosome releasing factor [Pseudomonas entomophila L48]
          Length = 185

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 117/177 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG +I  L +++ ++RTGR  PS+LD VKV A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMGKSIEALGRNLASIRTGRAHPSILDSVKVPAWGSDMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A + AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQASSVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD +  LKK  K  + SED      ++IQK+TD  +  ID+ F+ K+K+++
Sbjct: 127 AVRNVRRDALADLKKLTKDKEISEDEERRAADEIQKLTDKFVAEIDAAFKAKEKDLL 183


>gi|206560450|ref|YP_002231214.1| ribosome recycling factor [Burkholderia cenocepacia J2315]
 gi|238693109|sp|B4ECM8|RRF_BURCJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|198036491|emb|CAR52388.1| ribosome recycling factor [Burkholderia cenocepacia J2315]
          Length = 186

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  +D   + K+ EIM
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRASDDVQKLTDKHVAEVDKLVQTKEAEIM 184


>gi|116792732|gb|ABK26473.1| unknown [Picea sitchensis]
          Length = 279

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/173 (45%), Positives = 114/173 (65%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  T+  +K +  ++RTGR SP+ LD V+VE YGS V L  +A V+V +   L+V  +
Sbjct: 105 ERMEKTLETIKTNFNSIRTGRASPAFLDRVEVEYYGSPVNLKSLAQVSVPDGGTLLVQPY 164

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  + S+E+ I +SNLGL P  +G V+R+ +P+ T ERR  L+KV    AE+ KI++RN
Sbjct: 165 DKSSLKSIEKAISKSNLGLTPSNDGNVIRLSIPQLTSERRKELLKVVAKIAEEGKIAIRN 224

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRD +   +K  K  K SED V  L  D+QK+TD  IK +DS +++K+KE+M
Sbjct: 225 IRRDAIKAYEKLEKEKKLSEDNVKDLSGDLQKVTDEFIKKVDSLYKQKEKELM 277


>gi|296387840|ref|ZP_06877315.1| ribosome recycling factor [Pseudomonas aeruginosa PAb1]
          Length = 185

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 109/174 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RMG T+  L      +RTGR  PS+LD V V  YG+  PL QVANVTV + R L ++V
Sbjct: 10  QERMGKTLEALGHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVTVEDSRTLALAV 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE++++SVR
Sbjct: 70  FDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPMPGLTEETRKGYTKQARAEAEQARVSVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRRD +  LK  +K  + SED      +D+QK+TD  I  I+   E K+ ++M
Sbjct: 130 NIRRDALAQLKDLQKEKEISEDEERRAGDDVQKLTDKFIGEIEKALEAKEADLM 183


>gi|77919514|ref|YP_357329.1| ribosome recycling factor [Pelobacter carbinolicus DSM 2380]
 gi|123573931|sp|Q3A398|RRF_PELCD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|77545597|gb|ABA89159.1| ribosome recycling factor [Pelobacter carbinolicus DSM 2380]
          Length = 185

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 110/173 (63%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +  LKKDM  +RTGR S S+LD V V+ YG+  PLNQV  + V EPR++ +  W+K
Sbjct: 13  MDKAVESLKKDMTKVRTGRASTSLLDDVMVDYYGTPTPLNQVGTLAVPEPRLITIQPWEK 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
           +++A +ER I +++LGLNP  +G ++R+ +P  TEERR  + KV     E +K+ VR+ R
Sbjct: 73  KLLADIERAIFKADLGLNPTSDGNLIRLVIPPMTEERRKEMGKVVRKMGEDAKVGVRSAR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +KK  K+ + SED +   E +IQ +TDS +  ID    +K+KEIM  
Sbjct: 133 RDANDGMKKLEKNKEISEDDLKRGEKEIQDVTDSYVAKIDDLVSQKEKEIMEI 185


>gi|16800419|ref|NP_470687.1| ribosome recycling factor [Listeria innocua Clip11262]
 gi|22001944|sp|Q92C40|RRF_LISIN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|16413824|emb|CAC96582.1| frr [Listeria innocua Clip11262]
          Length = 185

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEDLKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 185


>gi|223937597|ref|ZP_03629500.1| ribosome recycling factor [bacterium Ellin514]
 gi|223893760|gb|EEF60218.1| ribosome recycling factor [bacterium Ellin514]
          Length = 186

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 117/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  T   ++ +   +RTG+ SPS+++ + VE YGS + + ++A +T  EPRML
Sbjct: 7   LLETEEKMIKTEEVVQHEFSGVRTGKASPSLVENILVEVYGSQMRIRELAGITTPEPRML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD   V  +E+ I +SNLGLNP V+ + +RI +P+ ++ERR   +KV    AE  +
Sbjct: 67  LIQPWDAGTVHPIEKAIQKSNLGLNPAVDKKFIRIVLPDLSQERRQEFIKVVKKMAEDGR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++R++RRDGM+ LKK  K+G  +ED+V   E +IQK+TDS I  ID    +K+KEI+
Sbjct: 127 VAIRHVRRDGMEALKKEEKAGGVTEDLVEGAEKEIQKLTDSYIAKIDGHLAQKEKEIL 184


>gi|325519183|gb|EGC98648.1| ribosome recycling factor [Burkholderia sp. TJI49]
          Length = 186

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPALTEERRRELTKVVKGEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQTKEAEIM 184


>gi|121608413|ref|YP_996220.1| ribosome recycling factor [Verminephrobacter eiseniae EF01-2]
 gi|166231526|sp|A1WHU5|RRF_VEREI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|121553053|gb|ABM57202.1| ribosome recycling factor [Verminephrobacter eiseniae EF01-2]
          Length = 186

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  +I+  + ++  +RTGR +P++LD V+V+ YG+ VPL+QVANV +++ R + V  W+
Sbjct: 13  RMDQSIAAFRNNLQKIRTGRANPALLDAVQVDYYGALVPLSQVANVALIDARTISVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M A +E+ I +S+LGLNP   G ++R+P+P  ++ERR  + K+A    E +KI+VRN+
Sbjct: 73  KGMGAKIEKAIRDSDLGLNPAAMGDLIRVPMPPMSQERRKEMTKLARNEGESAKIAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  + +KK  K   ASED     E ++QK TD  I  ID+    K++EIM  
Sbjct: 133 RRDANESIKKLVKDKLASEDEQKRAETEVQKFTDKHIAEIDALVAAKEQEIMAL 186


>gi|284048715|ref|YP_003399054.1| ribosome recycling factor [Acidaminococcus fermentans DSM 20731]
 gi|283952936|gb|ADB47739.1| ribosome recycling factor [Acidaminococcus fermentans DSM 20731]
          Length = 187

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 115/174 (66%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   +  L+ ++  +RTGR +PS+LD VKV+ YG+  P+ QVANV+V EPRM+V+  
Sbjct: 12  QEKMDKALHALRNELTNIRTGRATPSLLDQVKVDYYGAPTPVTQVANVSVPEPRMIVIQP 71

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD+ ++  +E+ I  S+LGLNP  +G V+R+ +P  TEERR  LVKV +   E S++ +R
Sbjct: 72  WDRSLLKVIEKAIMTSDLGLNPNNDGTVIRLNLPLLTEERRKELVKVVNKKGEASRVEIR 131

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRRD  D +KK  K+ + +ED      +  QK+TD  +K ID    +K+KE+M
Sbjct: 132 NIRRDFNDAVKKQVKAKEITEDDAKDATDFSQKLTDKFMKKIDDVLAQKEKEVM 185


>gi|302872259|ref|YP_003840895.1| ribosome recycling factor [Caldicellulosiruptor obsidiansis OB47]
 gi|312135566|ref|YP_004002904.1| ribosome recycling factor [Caldicellulosiruptor owensensis OL]
 gi|312793072|ref|YP_004025995.1| ribosome recycling factor [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|302575118|gb|ADL42909.1| ribosome recycling factor [Caldicellulosiruptor obsidiansis OB47]
 gi|311775617|gb|ADQ05104.1| ribosome recycling factor [Caldicellulosiruptor owensensis OL]
 gi|312180212|gb|ADQ40382.1| ribosome recycling factor [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 184

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M   I  LK++  T+R GR +P +LD V V+ YG   P+ QVA++TV E RM+
Sbjct: 5   IQVAEEKMKKAIETLKEEFATVRAGRANPHILDKVMVDYYGVPTPIPQVASITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W+  M+  +E+ I +S+LG+NP  +G+V+R+  PE TEERR  LVK     AE +K
Sbjct: 65  VIQPWEARMLKEIEKAIQKSDLGVNPTNDGKVIRLIFPELTEERRKELVKQVKKMAEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRR+ +D  KK +K+ + +ED +   E D+QK+ D  I+ I+     K+KEIM 
Sbjct: 125 VAIRNIRREALDEYKKMKKNNEITEDDLKDAEEDVQKLHDKYIEQIEKLLSAKEKEIME 183


>gi|299534751|ref|ZP_07048081.1| ribosome recycling factor [Lysinibacillus fusiformis ZC1]
 gi|298729839|gb|EFI70384.1| ribosome recycling factor [Lysinibacillus fusiformis ZC1]
          Length = 185

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K++M  TI+   +++ ++R GR + S+LD + V+ YG+  P+NQ+A V++ E R+L
Sbjct: 6   LEQAKEKMNKTIAAFSRELASIRAGRANASLLDRISVDYYGAATPINQLAGVSIPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK ++  +E+ I +S++G+ P  +G V+R+ +P  TEERR  LVK     AE +K
Sbjct: 66  VITPYDKSILGDIEKAIMKSDIGITPTNDGSVIRLMIPALTEERRKDLVKQVKKEAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RRD  D LKK  K+G+ +ED +     DIQK+TD  I  +D   ++K+KEI+ 
Sbjct: 126 IAVRNVRRDANDDLKKLEKAGEITEDDLRGYGEDIQKLTDEFIVKVDQVAKDKEKEILE 184


>gi|238787232|ref|ZP_04631031.1| Ribosome-recycling factor [Yersinia frederiksenii ATCC 33641]
 gi|238724494|gb|EEQ16135.1| Ribosome-recycling factor [Yersinia frederiksenii ATCC 33641]
          Length = 185

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 114/174 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L ++V+D
Sbjct: 12  RMEKCLEVFQSHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIIVEDSRTLALTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++S+RN+
Sbjct: 72  RSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  + +K   K  + SED     +++IQK+TD+ IK +D+    K+ E+M F
Sbjct: 132 RRDANEKVKALLKDKEISEDEDRRSQDEIQKLTDAFIKKVDAALAAKETELMDF 185


>gi|313679984|ref|YP_004057723.1| ribosome recycling factor [Oceanithermus profundus DSM 14977]
 gi|313152699|gb|ADR36550.1| ribosome recycling factor [Oceanithermus profundus DSM 14977]
          Length = 185

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 117/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            +  ++ M  T+   + ++ TLRTGR +P++L+ +KV+ YGS +PLNQ+A+++  + R L
Sbjct: 6   FKETREHMQKTLEVFESNLATLRTGRANPALLEHIKVDYYGSMMPLNQLASISAPDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD+  +  +E+ I +S+LGLNP  +G  L I +P  T ERR  +VK AH YAE+++
Sbjct: 66  VVQAWDQNALPLIEKAIRDSDLGLNPNNQGDTLFINIPALTAERRKEIVKAAHNYAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD +  +KK  +     ED V   E ++Q++TD  I+ I++  E K+KEI+
Sbjct: 126 VAVRNIRRDALHRIKKMSEEEHLPEDDVKRAEKEVQELTDEFIEKINAELEAKEKEIL 183


>gi|307729334|ref|YP_003906558.1| ribosome recycling factor [Burkholderia sp. CCGE1003]
 gi|307583869|gb|ADN57267.1| ribosome recycling factor [Burkholderia sp. CCGE1003]
          Length = 186

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + V  W+
Sbjct: 13  KMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIGVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV  VE+ I ES+LGLNP  +G V+R+P+P  TEERR  L KV  + AE +K++VRN+
Sbjct: 73  KKMVPVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM
Sbjct: 133 RRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDRFVAEIDKLVATKEAEIM 184


>gi|291166148|gb|EFE28194.1| ribosome recycling factor [Filifactor alocis ATCC 35896]
          Length = 185

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 112/177 (63%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++D+M  TIS LK+++  +R GR +P+MLD + V+ YGS  PL Q+A ++  +PR +V+ 
Sbjct: 9   LEDKMTKTISVLKEELSVIRAGRANPAMLDKISVDYYGSQTPLKQMAGISSPDPRTIVIQ 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK  +  +E+ I  S+LG NP  +G+V+RI +P+ TEERR  LVK+     E+SK+++
Sbjct: 69  PWDKTALKEIEKAILASDLGFNPSNDGEVIRINIPQLTEERRKELVKLVSKTGEQSKVAL 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RN RRD  D +KK  K G+  ED      +++Q I D   K IDS   +K+ EIM  
Sbjct: 129 RNARRDTNDKIKKIEKDGELGEDDAKKALDEVQHIIDKYTKEIDSVVAKKEAEIMEI 185


>gi|269792356|ref|YP_003317260.1| ribosome recycling factor [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099991|gb|ACZ18978.1| ribosome recycling factor [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 185

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ +K +   TI  LK  ++ +RTGR  P++++ +KV+ +G+  P+ Q+  VTV EPR L
Sbjct: 6   IKEMKQKTEKTIEHLKGTLLGIRTGRAHPALVEEIKVDYFGTMTPIKQMGTVTVPEPRQL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK  + ++E+ I  S+LG+ P  +G+ +R+ +PE T+ERR  L K+ + YAE+++
Sbjct: 66  VITPWDKSALKAIEKAIQSSSLGVTPKTDGESVRVVLPELTKERRQELSKLVNKYAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RRD ++  KK  K+G+ SED    L+ ++Q   D  IK +D+  +EK+KEI++
Sbjct: 126 VAIRNVRRDVLEAFKKMEKAGEISEDEHKKLQKEVQDHVDGAIKKVDALAQEKEKEILN 184


>gi|23099044|ref|NP_692510.1| ribosome recycling factor [Oceanobacillus iheyensis HTE831]
 gi|33301568|sp|Q8EQV0|RRF_OCEIH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|22777272|dbj|BAC13545.1| ribosome recycling factor [Oceanobacillus iheyensis HTE831]
          Length = 185

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 117/180 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+ ++ +M   +  L K++ ++R GR +PS+LD V V+ YG+  PLNQ+A+V   E R+
Sbjct: 5   ELKEMEQKMEQAVQALSKNLASVRAGRANPSILDSVFVDYYGASTPLNQLASVGAPEARL 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L ++ +DK  +  +E+ I +++LGL+P  +G ++RI +P  T+ERR  LVKV   Y+E++
Sbjct: 65  LTITPYDKSAIGDIEKAIQKADLGLSPSSDGNIIRINIPALTQERRKDLVKVVGKYSEEA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+ +RNIRRD  D LKK  K+G  +ED +   ++D+Q  T+  I  ID   + K+ EIM 
Sbjct: 125 KVQIRNIRRDTNDQLKKMEKNGDLTEDDLRGFQDDVQTSTNDYINKIDQLAKNKENEIME 184


>gi|256544891|ref|ZP_05472262.1| ribosome recycling factor [Anaerococcus vaginalis ATCC 51170]
 gi|256399390|gb|EEU12996.1| ribosome recycling factor [Anaerococcus vaginalis ATCC 51170]
          Length = 185

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 102/158 (64%)

Query: 28  LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           +R GR + S+LD +    YG+  P+NQ A ++  EPR+LV+  WDK  +  +E+ I++S+
Sbjct: 27  IRAGRANDSILDGITFSYYGTQTPINQAATISTPEPRLLVIKPWDKSNIKEIEKAINKSD 86

Query: 88  LGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSG 147
           LG+NP  +G+V+R+P P  TEERR  L K    Y+E SKI +RNIRRD MD  KK+ KS 
Sbjct: 87  LGINPQNDGEVIRLPFPALTEERRKELTKQVSEYSEDSKIQIRNIRRDSMDIAKKAEKSA 146

Query: 148 KASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
             +ED + S+E DIQKIT   I  ++   E K KE++ 
Sbjct: 147 DLTEDDLFSIEEDIQKITKKYIDKVEKTVESKNKELLE 184


>gi|170768435|ref|ZP_02902888.1| ribosome releasing factor [Escherichia albertii TW07627]
 gi|170122539|gb|EDS91470.1| ribosome releasing factor [Escherichia albertii TW07627]
          Length = 185

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+
Sbjct: 72  RSMSAAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++D+QK+TD+ IK I++   +K+ E+M F
Sbjct: 132 RRDANDKVKALLKEKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF 185


>gi|157372022|ref|YP_001480011.1| ribosome recycling factor [Serratia proteamaculans 568]
 gi|166991559|sp|A8GIE3|RRF_SERP5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157323786|gb|ABV42883.1| ribosome recycling factor [Serratia proteamaculans 568]
          Length = 185

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 115/174 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKSVEAFKNQISKIRTGRASPSILDGIMVEYYGASTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ +++VRN+
Sbjct: 72  RSISAAVEKAIMSSDLGLNPSSAGSDIRVPLPALTEERRKDLIKIVRNEAEQGRVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+KE+M F
Sbjct: 132 RRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKLLDAALADKEKELMEF 185


>gi|313619142|gb|EFR90928.1| ribosome recycling factor [Listeria innocua FSL S4-378]
          Length = 176

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 120/176 (68%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML+++ 
Sbjct: 1   KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISVPEARMLLITP 60

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K++VR
Sbjct: 61  YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVR 120

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 121 NIRREANEDLKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 176


>gi|300858728|ref|YP_003783711.1| ribosome-recycling factor [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300686182|gb|ADK29104.1| ribosome-recycling factor [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302206435|gb|ADL10777.1| Ribosome-recycling factor (RRF) [Corynebacterium pseudotuberculosis
           C231]
 gi|302330991|gb|ADL21185.1| ribosome recycling factor [Corynebacterium pseudotuberculosis 1002]
 gi|308276677|gb|ADO26576.1| ribosome recycling factor [Corynebacterium pseudotuberculosis I19]
          Length = 185

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 112/176 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++ MG T+   + D++ +RTGR +P+M + V  + YG   P+ Q+A ++V E RML++  
Sbjct: 10  EEHMGTTVERTRDDLVNIRTGRANPAMFNGVIADYYGVPTPITQMATISVPEARMLLIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++  M+  +E  I  S+LG+NP  +GQVLR+ VP+ TEERR  +VKVA +  E  KI++R
Sbjct: 70  YEMSMMGEIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRKEMVKVAKSKGEDGKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RR GMD LKK +K G A ED V + E ++ KIT   +  +D    +K+ E+M  
Sbjct: 130 NVRRKGMDQLKKIQKDGDAGEDEVQAAEKELDKITAKYVAQVDEVVSKKEAELMEV 185


>gi|161524433|ref|YP_001579445.1| ribosome recycling factor [Burkholderia multivorans ATCC 17616]
 gi|189350812|ref|YP_001946440.1| ribosome recycling factor [Burkholderia multivorans ATCC 17616]
 gi|221198319|ref|ZP_03571365.1| ribosome recycling factor [Burkholderia multivorans CGD2M]
 gi|221208258|ref|ZP_03581262.1| ribosome recycling factor [Burkholderia multivorans CGD2]
 gi|221215460|ref|ZP_03588424.1| ribosome recycling factor [Burkholderia multivorans CGD1]
 gi|238687071|sp|A9AIL7|RRF_BURM1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|160341862|gb|ABX14948.1| ribosome recycling factor [Burkholderia multivorans ATCC 17616]
 gi|189334834|dbj|BAG43904.1| ribosome recycling factor [Burkholderia multivorans ATCC 17616]
 gi|221164644|gb|EED97126.1| ribosome recycling factor [Burkholderia multivorans CGD1]
 gi|221171906|gb|EEE04349.1| ribosome recycling factor [Burkholderia multivorans CGD2]
 gi|221182251|gb|EEE14652.1| ribosome recycling factor [Burkholderia multivorans CGD2M]
          Length = 186

 Score =  152 bits (385), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPPLTEERRRELTKVVKGEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQTKEAEIM 184


>gi|225848029|ref|YP_002728192.1| ribosome recycling factor [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643308|gb|ACN98358.1| ribosome recycling factor [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 184

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 120/178 (67%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM   ++  K+++  +RTGR S  +++ +KV+ YGS +PL Q+A ++  EP  +
Sbjct: 6   LKEAEKRMKGAVAKFKEELTGIRTGRASTGLVENIKVDYYGSEIPLKQLATISTPEPSQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  V S+E+ + E+NLG NP  EG  +R+ +P  TEERR  +VK+ H +AE+++
Sbjct: 66  VIQTWDKSAVKSIEKALIEANLGANPQTEGNTIRLNLPPMTEERRKEVVKIIHKFAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RRD  ++++K +K G + +D+  +LE  +QK+TD  I+ I+   E K+KEI+
Sbjct: 126 VAVRNVRRDEKENIEKLKKEGFSEDDVKKALEK-LQKLTDKYIEEINQLAEAKEKEIL 182


>gi|221632994|ref|YP_002522217.1| ribosome recycling factor [Thermomicrobium roseum DSM 5159]
 gi|254809539|sp|B9L003|RRF_THERP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|221155498|gb|ACM04625.1| ribosome recycling factor [Thermomicrobium roseum DSM 5159]
          Length = 185

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + RM  +I  L++++  +R GR +PS+L+ ++V  YG+  PLNQ+A ++  E R+L
Sbjct: 6   LRDAEQRMKKSIELLRQELAGIRAGRAAPSLLEHLEVNYYGTPTPLNQLATISAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV VWD+  V++VE+ I +S LGLNP V+GQ LRI +P  TEERR  LVK+ H   E++K
Sbjct: 66  VVQVWDRNAVSAVEKAIRQSELGLNPSVDGQTLRIQLPPLTEERRRQLVKLVHEEVEETK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +  +K+  K+ + SED     E  +Q +T+  I   D   ++K+ +I+  
Sbjct: 126 VAIRNIRRDALADIKELLKNKEISEDDERRAEQRLQDLTNRYIAEADKLGKQKEHDILEI 185


>gi|48474737|sp|Q8VS52|RRF_LACRE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|18139798|gb|AAL60144.1|AF401482_3 ribosome recycling factor [Lactobacillus reuteri]
          Length = 186

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 118/178 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KD+M  +   L++ +  +R GR + S+L+ VKV+ YG+  PLNQVA++T+ E R L
Sbjct: 8   LNEAKDKMAKSGDALRRTLADIRAGRANASLLNGVKVDYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D+  + ++E+ I+ +NLGL P  +G  +RI +P+ TEERR  LVK   A  EK+K
Sbjct: 68  LVTPYDESSLDNIEKAIYAANLGLTPQNDGSAIRILIPQLTEERRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RR+ MD LKK  K G  ++D    LE  +Q  TD+ IKN+++   +K+KE+M
Sbjct: 128 VAVRNVRREAMDDLKKGNKDGDFNDDEFHDLEKKVQTETDNGIKNLENIAADKEKELM 185


>gi|302386239|ref|YP_003822061.1| ribosome recycling factor [Clostridium saccharolyticum WM1]
 gi|302196867|gb|ADL04438.1| ribosome recycling factor [Clostridium saccharolyticum WM1]
          Length = 184

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  +D+M  T+  L+ + MT+R GR +P +LD ++V+ YG+  P+ QV NV++ E RM+
Sbjct: 5   LQVYEDKMNKTLKALENEFMTIRAGRANPHVLDKIRVDYYGTPTPIQQVGNVSIPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W+K ++ ++E+ I  S LG+NP  +G V+R+  PE TEERR  LVK      E +K
Sbjct: 65  VIQPWEKSLLKAIEKAILTSELGINPTNDGNVIRLVFPELTEERRKDLVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD  D  KK  K+ + SED  A  E+ IQK+TD  I  ++   EEK K+++
Sbjct: 125 IAIRNIRRDANDAFKKQLKAEEISEDEQAEAEDQIQKLTDKMIDKVEKSVEEKSKDLL 182


>gi|228470918|ref|ZP_04055763.1| ribosome recycling factor [Porphyromonas uenonis 60-3]
 gi|228307315|gb|EEK16329.1| ribosome recycling factor [Porphyromonas uenonis 60-3]
          Length = 186

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/171 (43%), Positives = 112/171 (65%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   I FL+  +  +R G+ +P +LD + VEAYG+ +PLNQVA VTV + R L ++ WDK
Sbjct: 14  MLKAIEFLQDKLDRIRAGKANPVLLDDITVEAYGAPMPLNQVATVTVPDARTLAITPWDK 73

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
           +++  +E+GI +S+LG+ P   G+++RI +P  TEERR  LVK + A +E++KIS+RN R
Sbjct: 74  KLIKDIEKGILDSSLGITPTNNGEMIRITMPPLTEERRKELVKQSKAESEEAKISIRNAR 133

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +D  KK+ K+    ED +   END QK+ D  I  ++     K+KEIM
Sbjct: 134 RDAIDAAKKAVKAEDLPEDTIKQTENDAQKLHDKYIARVEEALAAKEKEIM 184


>gi|255524238|ref|ZP_05391197.1| ribosome recycling factor [Clostridium carboxidivorans P7]
 gi|296185359|ref|ZP_06853769.1| ribosome recycling factor [Clostridium carboxidivorans P7]
 gi|255512063|gb|EET88344.1| ribosome recycling factor [Clostridium carboxidivorans P7]
 gi|296050193|gb|EFG89617.1| ribosome recycling factor [Clostridium carboxidivorans P7]
          Length = 185

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 116/175 (66%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  T+  LK+++ +++ GR +P+MLD ++ E YG+  P+NQ+AN++V EPR+L +  W
Sbjct: 11  EKMNKTVEALKRELASMKAGRANPAMLDKIEAEYYGTMTPINQLANISVPEPRVLAIQPW 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK    ++E+ I +S+LG+NP  +G+++R+ + E TEE R  +VK      E SK++VR+
Sbjct: 71  DKGSFKAIEKAILKSDLGINPSSDGEMIRLVIAELTEETRKNIVKNIKKDGEDSKVAVRS 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IRRD  D +K  +K    SED +   E++IQK TD+ IK +D   E K+KEIM  
Sbjct: 131 IRRDCNDKIKVLKKESDISEDEIKKAEDEIQKKTDAFIKQVDKIVEAKEKEIMSL 185


>gi|253580861|ref|ZP_04858124.1| ribosome recycling factor [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847931|gb|EES75898.1| ribosome recycling factor [Ruminococcus sp. 5_1_39BFAA]
          Length = 183

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 114/178 (64%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M  T++ L+ +++T+R GR +P +LD + V+ YG+  PL QVAN+TV E RM+
Sbjct: 5   IQKYEEKMKKTLASLESELVTIRAGRANPHILDKLAVDYYGAPTPLQQVANITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++  +E+ I  S+LGLNP  +G+V+R+  PE TEERR  LVK      E +K
Sbjct: 65  QIQPWESSLIKGIEKAILTSDLGLNPSNDGKVIRLVFPELTEERRKELVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD  D  KK  K    SED +  LE  IQK TD  IK +D+  + K KEIM
Sbjct: 125 VAVRNIRRDANDAFKKLAKQD-VSEDEIKELEEKIQKSTDKYIKEVDAAVDAKSKEIM 181


>gi|332523063|ref|ZP_08399315.1| ribosome recycling factor [Streptococcus porcinus str. Jelinkova
           176]
 gi|332314327|gb|EGJ27312.1| ribosome recycling factor [Streptococcus porcinus str. Jelinkova
           176]
          Length = 185

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/183 (41%), Positives = 116/183 (63%), Gaps = 2/183 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N +ID  N   R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ++++TV 
Sbjct: 3   NAIIDKAN--QRFEQSFQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLSSITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L++S +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K     
Sbjct: 61  EARVLLISPFDKNSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKNLAKEVKKV 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E  K+++RNIRRD MD  KK  K  + SED + +LE DIQK TD  IK+ID+   EK+K
Sbjct: 121 GENQKVAIRNIRRDAMDEAKKQEKDKEISEDELKTLEKDIQKATDDAIKHIDAMTAEKEK 180

Query: 182 EIM 184
           E++
Sbjct: 181 ELL 183


>gi|317132574|ref|YP_004091888.1| ribosome recycling factor [Ethanoligenens harbinense YUAN-3]
 gi|315470553|gb|ADU27157.1| ribosome recycling factor [Ethanoligenens harbinense YUAN-3]
          Length = 183

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + +M  T++ L+ +  T+R GR +P++LD V+V+ YG+  P+NQ+A V+V E R L 
Sbjct: 5   QDYQVKMTKTVAALESEYGTIRAGRANPAILDKVRVDYYGTPTPINQIAAVSVTEARNLT 64

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD   + ++E+ I+ S+LG+NP  +G+++RI  P  TEERR  LVK    Y E +K+
Sbjct: 65  IQPWDITQLRAIEKAIYASDLGVNPQNDGKIIRIAFPPLTEERRKELVKTVRKYGEDAKV 124

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++R+IRRD ++ LK+ +K G+ +ED +   E  +Q  TD   K ID    +K+KEIM  
Sbjct: 125 AIRSIRRDAIESLKEQKKGGELTEDDLKDAEKKVQDATDRFCKEIDGIAAKKEKEIMEI 183


>gi|329117138|ref|ZP_08245855.1| ribosome recycling factor [Streptococcus parauberis NCFD 2020]
 gi|326907543|gb|EGE54457.1| ribosome recycling factor [Streptococcus parauberis NCFD 2020]
          Length = 185

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 117/184 (63%), Gaps = 2/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N +I+  N  +R   +   L ++  ++R GR + S+LD ++VE YG+  PLNQ+A++TV 
Sbjct: 3   NAIIEKAN--ERFQQSHQSLSREYASIRAGRANASLLDRIQVEYYGAPTPLNQLASITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L++S +DK  +  +ER I+ S+LG+ P  +G ++R+ +P  TEE R  L K     
Sbjct: 61  EARVLMISPFDKSSIKDIERAINASDLGITPANDGSIIRLVIPALTEETRKELAKEVKKV 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E SKI++RNIRRD MD  KK  K+ + +ED + SLE DIQK TD  IK+ID     K+K
Sbjct: 121 GESSKIAIRNIRRDAMDDAKKQEKAKEITEDELKSLEKDIQKATDDAIKHIDQMTANKEK 180

Query: 182 EIMH 185
           E++ 
Sbjct: 181 ELLE 184


>gi|227529099|ref|ZP_03959148.1| ribosome recycling factor [Lactobacillus vaginalis ATCC 49540]
 gi|227350943|gb|EEJ41234.1| ribosome recycling factor [Lactobacillus vaginalis ATCC 49540]
          Length = 186

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 118/178 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KD+M  +   L++ +  +R GR + S+L+ VKV+ YG+  PLNQVA++T+ E R L
Sbjct: 8   LDEAKDKMAKSGDALRRTLADIRAGRANASLLNGVKVDYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D+  + ++E+ I+ +NLGL P  +G  +RI +P+ TEERR  LVK   A  EK+K
Sbjct: 68  LVTPYDESSLDNIEKAIYAANLGLTPQNDGSAIRILIPQLTEERRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RR+ MD LKK  K G  ++D    LE  +Q  TD+ IKN+++   +K+KE+M
Sbjct: 128 VAVRNVRREAMDDLKKGNKDGDFNDDEFHELEKKVQTETDNGIKNLENIAADKEKELM 185


>gi|322420123|ref|YP_004199346.1| ribosome recycling factor [Geobacter sp. M18]
 gi|320126510|gb|ADW14070.1| ribosome recycling factor [Geobacter sp. M18]
          Length = 185

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 111/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  TI  L+KD   +RTGR S S+LD +KV++YG+  PLNQVA + V E R + +  WD 
Sbjct: 13  MDKTIESLRKDYQKVRTGRASTSLLDEIKVDSYGNLSPLNQVATLAVPEARTITIQPWDS 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
           +M+  +E+ I  SNLGLNP  +G+++R+ +P  TEERR  +VK     AE+SK+++RNIR
Sbjct: 73  KMIQPIEKAIMNSNLGLNPANDGKMIRLTLPPLTEERRKDIVKQLKRDAEESKVALRNIR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD +D LKK  K  + SED +   E D+Q  T++ +  ID     K+KE++  
Sbjct: 133 RDAIDQLKKLEKDKQISEDELKRAEKDVQDSTNAHVAKIDEVLVHKEKEVLEV 185


>gi|300715399|ref|YP_003740202.1| ribosome recycling factor [Erwinia billingiae Eb661]
 gi|299061235|emb|CAX58344.1| Ribosome recycling factor [Erwinia billingiae Eb661]
          Length = 185

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + V+ YGS  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFKNHISKIRTGRASPSILDGIMVDYYGSSTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RSISAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++DIQK+TD  IK ID+   EK+ E+M F
Sbjct: 132 RRDANDKVKALLKDKEISEDDEHRSQDDIQKMTDVFIKKIDTALAEKEAELMDF 185


>gi|255029475|ref|ZP_05301426.1| ribosome recycling factor [Listeria monocytogenes LO28]
          Length = 182

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 120/177 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI
Sbjct: 126 VAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEI 182


>gi|138894772|ref|YP_001125225.1| ribosome recycling factor [Geobacillus thermodenitrificans NG80-2]
 gi|196247605|ref|ZP_03146307.1| ribosome recycling factor [Geobacillus sp. G11MC16]
 gi|166230789|sp|A4IMC6|RRF_GEOTN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|134266285|gb|ABO66480.1| Ribosome recycling factor [Geobacillus thermodenitrificans NG80-2]
 gi|196212389|gb|EDY07146.1| ribosome recycling factor [Geobacillus sp. G11MC16]
          Length = 185

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  K++M   +    +++ T+R GR +  +L+ V V+ YG   P+NQ+A ++V E RML
Sbjct: 6   IQQAKEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E+ I  S+LG+ P  +G V+R+ +P  TEERR  L K+   Y+E++K
Sbjct: 66  VIQPYDKSVIKEMEKAILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD  D LKK  K+ + +ED + S  +++QK+TDS I  ID+  +EK+KE+M 
Sbjct: 126 VAVRNIRRDANDELKKLEKNSEITEDELRSYTDEVQKLTDSHIAKIDAITKEKEKEVME 184


>gi|83749795|ref|ZP_00946769.1| Ribosome Recycling Factor (RRF) [Ralstonia solanacearum UW551]
 gi|207723357|ref|YP_002253756.1| ribosome recycling factor (ribosome-releasing factor) (rrf) protein
           [Ralstonia solanacearum MolK2]
 gi|207743241|ref|YP_002259633.1| ribosome recycling factor (ribosome-releasing factor) (rrf) protein
           [Ralstonia solanacearum IPO1609]
 gi|83723552|gb|EAP70756.1| Ribosome Recycling Factor (RRF) [Ralstonia solanacearum UW551]
 gi|206588556|emb|CAQ35519.1| ribosome recycling factor (ribosome-releasing factor) (rrf) protein
           [Ralstonia solanacearum MolK2]
 gi|206594638|emb|CAQ61565.1| ribosome recycling factor (ribosome-releasing factor) (rrf) protein
           [Ralstonia solanacearum IPO1609]
          Length = 186

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 110/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVANV + + R + V  W+
Sbjct: 13  KMQKSIDAFKADLAKVRTGRAHAGLLDHVQVDYYGSMVPISQVANVGLADARTISVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K++V++VE+ I E++LGLNP   G V+R+P+P  TEERR  L KV  +  E +K++VRN+
Sbjct: 73  KKLVSAVEKAIREADLGLNPATMGDVIRVPMPALTEERRKELTKVVKSEGEDAKVAVRNV 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  +  KK  K    SED     ++D+QK+TD  +  +D    EK KEIM
Sbjct: 133 RRDANEQFKKLVKDKAISEDDERRGQDDVQKLTDRFVAEVDKLVAEKDKEIM 184


>gi|15674582|ref|NP_268756.1| ribosome recycling factor [Streptococcus pyogenes M1 GAS]
 gi|21909863|ref|NP_664131.1| ribosome recycling factor [Streptococcus pyogenes MGAS315]
 gi|28896442|ref|NP_802792.1| ribosome recycling factor [Streptococcus pyogenes SSI-1]
 gi|50913751|ref|YP_059723.1| ribosome recycling factor [Streptococcus pyogenes MGAS10394]
 gi|71910193|ref|YP_281743.1| ribosome recycling factor [Streptococcus pyogenes MGAS5005]
 gi|94988011|ref|YP_596112.1| ribosome recycling factor [Streptococcus pyogenes MGAS9429]
 gi|94989890|ref|YP_597990.1| ribosome recycling factor [Streptococcus pyogenes MGAS10270]
 gi|94991895|ref|YP_599994.1| ribosome recycling factor [Streptococcus pyogenes MGAS2096]
 gi|94993775|ref|YP_601873.1| ribosome recycling factor [Streptococcus pyogenes MGAS10750]
 gi|139474297|ref|YP_001129013.1| ribosome recycling factor [Streptococcus pyogenes str. Manfredo]
 gi|209558949|ref|YP_002285421.1| ribosome recycling factor [Streptococcus pyogenes NZ131]
 gi|306827884|ref|ZP_07461152.1| ribosome recycling factor [Streptococcus pyogenes ATCC 10782]
 gi|57014111|sp|P68903|RRF_STRP1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|57014112|sp|P68904|RRF_STRP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|57014114|sp|Q5XDH3|RRF_STRP6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231514|sp|Q1JD58|RRF_STRPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231515|sp|Q1JN31|RRF_STRPC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231516|sp|Q1JI77|RRF_STRPD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231517|sp|Q1J832|RRF_STRPF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231518|sp|A2RG30|RRF_STRPG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749943|sp|B5XK64|RRF_STRPZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|13621691|gb|AAK33477.1| putative ribosome recycling factor [Streptococcus pyogenes M1 GAS]
 gi|21904050|gb|AAM78934.1| putative ribosome recycling factor [Streptococcus pyogenes MGAS315]
 gi|28811693|dbj|BAC64625.1| putative ribosome recycling factor [Streptococcus pyogenes SSI-1]
 gi|50902825|gb|AAT86540.1| Ribosome Recycling Factor [Streptococcus pyogenes MGAS10394]
 gi|71852975|gb|AAZ50998.1| ribosome recycling factor [Streptococcus pyogenes MGAS5005]
 gi|94541519|gb|ABF31568.1| ribosome recycling factor (RRF) [Streptococcus pyogenes MGAS9429]
 gi|94543398|gb|ABF33446.1| Ribosome Recycling Factor (RRF) [Streptococcus pyogenes MGAS10270]
 gi|94545403|gb|ABF35450.1| Ribosome Recycling Factor (RRF) [Streptococcus pyogenes MGAS2096]
 gi|94547283|gb|ABF37329.1| Ribosome Recycling Factor (RRF) [Streptococcus pyogenes MGAS10750]
 gi|134272544|emb|CAM30809.1| ribosome recycling factor [Streptococcus pyogenes str. Manfredo]
 gi|209540150|gb|ACI60726.1| Ribosome recycling factor [Streptococcus pyogenes NZ131]
 gi|304429932|gb|EFM32973.1| ribosome recycling factor [Streptococcus pyogenes ATCC 10782]
          Length = 185

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  IK ID    EK+KE++
Sbjct: 126 IAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEIDRMTAEKEKELL 183


>gi|257066151|ref|YP_003152407.1| ribosome recycling factor [Anaerococcus prevotii DSM 20548]
 gi|256798031|gb|ACV28686.1| ribosome recycling factor [Anaerococcus prevotii DSM 20548]
          Length = 186

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 111/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M   +    K +  ++ GR + ++LD +    YG+  P+NQ A V++ E R+LV+  
Sbjct: 11  KDEMTKALDSFDKRIANIKAGRATEAILDGITFSYYGTETPINQAATVSIPEARLLVIKP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK  +  +E+ I +SN+G+ P  +G+V+R+P P+ TEERR    K    YAE +KI +R
Sbjct: 71  WDKTNIGPIEKAILKSNIGITPQNDGEVIRLPFPQLTEERRKEYTKEVDTYAEDAKIVIR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N RR+ MD +KKS KSG  +ED   +LE++IQKITD  I+++++   +K KE+M
Sbjct: 131 NKRREAMDEVKKSEKSGDITEDDRYTLEDEIQKITDKMIEDVEALASKKNKELM 184


>gi|116627334|ref|YP_819953.1| ribosome recycling factor [Streptococcus thermophilus LMD-9]
 gi|122268064|sp|Q03M15|RRF_STRTD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116100611|gb|ABJ65757.1| ribosome recycling factor [Streptococcus thermophilus LMD-9]
 gi|312277842|gb|ADQ62499.1| Ribosome recycling factor [Streptococcus thermophilus ND03]
          Length = 185

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   T   L ++   +R GR + S+LD + VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFAHTHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K  + +ED + +LE DIQK TD  +  IDS   EK+KE++
Sbjct: 126 IAIRNIRRDAMDEAKKQEKEKEITEDQLKTLEKDIQKATDDAVNKIDSMIAEKEKELL 183


>gi|291519555|emb|CBK74776.1| ribosome recycling factor [Butyrivibrio fibrisolvens 16/4]
          Length = 173

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 110/171 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  + + L+ +  T+R GR +P +LD + V+ YG+  PL QVAN++V EPR++ +  W+ 
Sbjct: 1   MTKSYNNLESEFTTIRAGRANPHILDKITVDYYGAPTPLQQVANISVPEPRLIQIQPWEP 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            +V  +E+ I+ S++G+NP  +G+++R+  PE TEERR  + K    + E +K+++RNIR
Sbjct: 61  SLVKEIEKAINMSDIGINPTNDGKLIRLVFPELTEERRKEIAKDVKKHGEDAKVAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +DHLKK  K    SED +  LE+  QK+TD  I  +D   E K KEIM
Sbjct: 121 RDAIDHLKKHSKDEGVSEDEIKDLEDKCQKMTDKFIAEVDKAVEAKTKEIM 171


>gi|113868031|ref|YP_726520.1| ribosome recycling factor [Ralstonia eutropha H16]
 gi|123329181|sp|Q0KA19|RRF_RALEH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|113526807|emb|CAJ93152.1| Ribosome Recycling Factor (RRF) [Ralstonia eutropha H16]
          Length = 186

 Score =  152 bits (385), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVA V + + R + 
Sbjct: 8   KSVEQKMQKSIEAFKADLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVAAVGLADARTIT 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I + +LGLNP   G+V+R+P+P  TEERR  L KV    AE +K+
Sbjct: 68  VQPWEKKMVGAVEKAIRDCDLGLNPATMGEVIRVPMPALTEERRKELTKVVKGEAEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  +  KK  K    SED     ++++QK+TD  +  ID    EK+KEIM
Sbjct: 128 AVRNLRRDANEQFKKLVKDKTISEDDERRGQDEVQKLTDKYVAEIDKMVAEKEKEIM 184


>gi|329296134|ref|ZP_08253470.1| ribosome recycling factor [Plautia stali symbiont]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMDKCVEAFKNTISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RSMGPAVEKAIIASDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     +++IQK+TD  IK++D+   EK+KE+M F
Sbjct: 132 RRDANDKIKALLKDKEISEDDERRSQDEIQKMTDVRIKHVDAALAEKEKELMEF 185


>gi|55820525|ref|YP_138967.1| ribosome recycling factor [Streptococcus thermophilus LMG 18311]
 gi|55822414|ref|YP_140855.1| ribosome recycling factor [Streptococcus thermophilus CNRZ1066]
 gi|62900786|sp|Q5M140|RRF_STRT1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|62900787|sp|Q5M5M9|RRF_STRT2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|55736510|gb|AAV60152.1| ribosome recycling factor [Streptococcus thermophilus LMG 18311]
 gi|55738399|gb|AAV62040.1| ribosome recycling factor [Streptococcus thermophilus CNRZ1066]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   T   L ++   +R GR + S+LD + VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFAHTHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K  + +ED + +LE DIQK TD  +  IDS   EK+KE++
Sbjct: 126 IAIRNIRRDAMDEAKKQEKEKEITEDQLKTLEKDIQKATDDAVNKIDSMIAEKEKELL 183


>gi|328950711|ref|YP_004368046.1| Ribosome-recycling factor [Marinithermus hydrothermalis DSM 14884]
 gi|328451035|gb|AEB11936.1| Ribosome-recycling factor [Marinithermus hydrothermalis DSM 14884]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/171 (43%), Positives = 111/171 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+   + ++  LRTGR +P++L  +KVE YGS +PLNQVA+V+  + R LVV  WD+
Sbjct: 13  MQKTVEAFEANLGGLRTGRANPALLAHLKVEYYGSVMPLNQVASVSAPDARTLVVQAWDQ 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++E+ I ES+LGLNP   G  L I +P  TEERR  + + A  YAE+++I+VRN R
Sbjct: 73  NALPAIEKAIRESDLGLNPNNRGDALYIQIPPLTEERRKEIARTARGYAEEARIAVRNAR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R+ +D +KK  K    SED     ++++QKIT+  I  ID+  E+K+ EI+
Sbjct: 133 REALDQIKKLEKEKLLSEDEAKRAQDEVQKITNEFIDKIDAILEKKEHEIL 183


>gi|166031004|ref|ZP_02233833.1| hypothetical protein DORFOR_00685 [Dorea formicigenerans ATCC
           27755]
 gi|166029271|gb|EDR48028.1| hypothetical protein DORFOR_00685 [Dorea formicigenerans ATCC
           27755]
          Length = 183

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/172 (44%), Positives = 114/172 (66%), Gaps = 1/172 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  T+  L  +M T+R GR +P++L+ + V+ YG+  P+ QVANV+V EPRM+ +  W+
Sbjct: 11  KMQKTMDSLDSEMGTIRAGRANPNVLNRIMVDYYGTPTPIQQVANVSVPEPRMIQIQPWE 70

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+  +E+ I  S+LG+NP  +G  +R+  PE TEERR  LVK      E +K+++RNI
Sbjct: 71  KSMLKVIEKAIMVSDLGINPTNDGTAVRLIFPELTEERRKELVKDVKKKGEAAKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRDG D  KK + S   SED + +LE+++QK+TD  +K IDS  E K KE+M
Sbjct: 131 RRDGNDAFKKLKGSD-VSEDEIKNLEDELQKMTDKYVKEIDSAVEVKSKEVM 181


>gi|149907550|ref|ZP_01896297.1| ribosome releasing factor [Moritella sp. PE36]
 gi|149809220|gb|EDM69149.1| ribosome releasing factor [Moritella sp. PE36]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RMG +I  LK  +  +RTGR  PS+L+ + V  YG++ PLNQV NV   + R L ++V+D
Sbjct: 12  RMGKSIDALKSQLSKVRTGRAHPSILNGITVSYYGTNTPLNQVGNVGTEDSRTLSITVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             MV +VE+ I  S+LGLNP   G  +RIP+P  TEERR +L+KV  A AE+ ++++RNI
Sbjct: 72  ATMVKAVEKAIMMSDLGLNPQSAGTNIRIPLPALTEERRKSLIKVVRADAEQGRVAIRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD    +K   K  +  ED     +++IQK+TD+ IK ID+   +K+K++M  
Sbjct: 132 RRDANGDIKALLKEKEIGEDDDRRAQDEIQKMTDTCIKQIDTILSDKEKDLMEV 185


>gi|295676822|ref|YP_003605346.1| ribosome recycling factor [Burkholderia sp. CCGE1002]
 gi|295436665|gb|ADG15835.1| ribosome recycling factor [Burkholderia sp. CCGE1002]
          Length = 186

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 110/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + V  W+
Sbjct: 13  KMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIGVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV  VE+ I ES+LGLNP   G V+R+P+P  TEERR  L KV  + AE +K++VRN+
Sbjct: 73  KKMVQVVEKAIRESDLGLNPATHGDVIRVPMPALTEERRRELTKVVRSEAETAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM
Sbjct: 133 RRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVTTKEAEIM 184


>gi|15644151|ref|NP_229200.1| ribosome recycling factor [Thermotoga maritima MSB8]
 gi|170289219|ref|YP_001739457.1| ribosome recycling factor [Thermotoga sp. RQ2]
 gi|6831653|sp|Q9X1B9|RRF_THEMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238688857|sp|B1LBS6|RRF_THESQ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|6730315|pdb|1DD5|A Chain A, Crystal Structure Of Thermotoga Maritima Ribosome
           Recycling Factor, Rrf
 gi|50513689|pdb|1T1M|C Chain C, Binding Position Of Ribosome Recycling Factor (Rrf) On The
           E. Coli 70s Ribosome
 gi|4981962|gb|AAD36470.1|AE001792_10 ribosome recycling factor [Thermotoga maritima MSB8]
 gi|170176722|gb|ACB09774.1| ribosome recycling factor [Thermotoga sp. RQ2]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M  T+  ++ ++  +RTG+ SP++L+ +KV+ YG   P+NQ+A +++ E R L
Sbjct: 6   IKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISISEERTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ I+ S+LGLNPI +G V+R+  P  T E+R   VK A    E+ K
Sbjct: 66  VIKPWDKSVLSLIEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR+ +  +K+ +K G   ED    LEN+IQK+TD  I+ +D  FE KK+EIM F
Sbjct: 126 IAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVFEIKKEEIMEF 185


>gi|331090948|ref|ZP_08339790.1| ribosome-recycling factor [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330405170|gb|EGG84706.1| ribosome-recycling factor [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 183

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 113/173 (65%), Gaps = 1/173 (0%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  + + L  ++ T+R GR +P +LD + V+ YG   P+ Q AN++V EPRM+ +  W
Sbjct: 10  EKMTKSYNSLVGELATIRAGRANPHVLDKLTVDYYGVPTPIQQAANISVPEPRMIQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K MV  +E+ I  S++G+NP  +G V+R+  PE TEERR  L K      E++K+++RN
Sbjct: 70  EKSMVKEIEKAILTSDIGINPTNDGSVIRLVFPELTEERRKELAKDVKKKGEQAKVAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRDG D  KK  K  + SED +  LE+++QK+TD  IK+ID   EEK KE+M
Sbjct: 130 IRRDGNDTFKKL-KGTEVSEDEIKDLEDELQKLTDKYIKDIDKAVEEKSKEVM 181


>gi|187924430|ref|YP_001896072.1| ribosome recycling factor [Burkholderia phytofirmans PsJN]
 gi|238689610|sp|B2T5J1|RRF_BURPP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|187715624|gb|ACD16848.1| ribosome recycling factor [Burkholderia phytofirmans PsJN]
          Length = 186

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + V  W+
Sbjct: 13  KMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIGVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV  VE+ I ES+LGLNP  +G V+R+P+P  TEERR  L KV  + AE +K++VRN+
Sbjct: 73  KKMVQVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM
Sbjct: 133 RRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVVTKEAEIM 184


>gi|221133311|ref|ZP_03559616.1| ribosome recycling factor [Glaciecola sp. HTCC2999]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 109/178 (61%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + +DRM  ++S LK  +  +RTGR  PS+LD + V  YG+  PL Q+AN+   + R L +
Sbjct: 8   DAQDRMEKSVSALKSQLAKIRTGRAHPSLLDSIVVNYYGADTPLKQLANIIAEDSRTLAL 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           SV+DK  + +VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KVA   AE  +++
Sbjct: 68  SVFDKSAIQAVEKAIMSSDLGLNPMSAGGAIRIPLPPLTEERRKDLIKVARGEAENGRVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIRRD    +K   K    SED   + E +IQ +T+  IK +D     K+KE+M  
Sbjct: 128 VRNIRRDANSDIKDLLKDKDISEDQARAGEENIQSLTNDFIKQVDELLSVKEKELMEI 185


>gi|170692145|ref|ZP_02883308.1| ribosome recycling factor [Burkholderia graminis C4D1M]
 gi|170142575|gb|EDT10740.1| ribosome recycling factor [Burkholderia graminis C4D1M]
          Length = 186

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + V  W+
Sbjct: 13  KMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIGVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV  VE+ I ES+LGLNP  +G V+R+P+P  TEERR  L KV  + AE +K++VRN+
Sbjct: 73  KKMVPVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM
Sbjct: 133 RRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVVTKEAEIM 184


>gi|260101372|ref|ZP_05751609.1| ribosome recycling factor [Lactobacillus helveticus DSM 20075]
 gi|260084824|gb|EEW68944.1| ribosome recycling factor [Lactobacillus helveticus DSM 20075]
 gi|328465732|gb|EGF36936.1| ribosome recycling factor [Lactobacillus helveticus MTCC 5463]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D M  +I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQDNMDKSIKVYQKRLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE +K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RR+ MD LKK +K G  +ED   +LE  +QKITD + K ID   +EK+KEI+ 
Sbjct: 126 IAVRNVRREAMDALKKEQKDGNITEDEQRNLEKQVQKITDDSTKKIDQLADEKRKEIIQ 184


>gi|229086377|ref|ZP_04218553.1| Ribosome-recycling factor [Bacillus cereus Rock3-44]
 gi|228696893|gb|EEL49702.1| Ribosome-recycling factor [Bacillus cereus Rock3-44]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 115/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ ++R GR S S LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSANEKMEKAVAAYSRELASVRAGRASASALDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVK    YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRKDLVKTVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD  D LKK  K+ + +ED +     DIQK TD  I  +D   + K+KEIM 
Sbjct: 126 VAVRNVRRDANDDLKKLEKASEITEDDLRGYAEDIQKETDKYIAKVDEIAKNKEKEIME 184


>gi|19745589|ref|NP_606725.1| ribosome recycling factor [Streptococcus pyogenes MGAS8232]
 gi|24418654|sp|Q8P274|RRF_STRP8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|19747714|gb|AAL97224.1| putative ribosome recycling factor [Streptococcus pyogenes
           MGAS8232]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  IK ID    EK+KE++
Sbjct: 126 IAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEIDRMTAEKEKELL 183


>gi|269138096|ref|YP_003294796.1| ribosome recycling factor [Edwardsiella tarda EIB202]
 gi|267983756|gb|ACY83585.1| ribosome recycling factor [Edwardsiella tarda EIB202]
 gi|304558140|gb|ADM40804.1| Ribosome recycling factor [Edwardsiella tarda FL6-60]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K ++  +RTGR  P++LD ++VE YG+  PL Q+AN+   + R L ++V+D
Sbjct: 12  RMDKCVESFKGNISKIRTGRAHPNLLDGIQVEYYGTATPLRQLANIVAEDSRTLALTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+K+  + AE  ++SVRN+
Sbjct: 72  RSMSGAIEKAILTSDLGLNPASAGTVIRVPLPPLTEERRKDLIKLVRSEAESGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     +++IQKITD  IK ID+   +K+KE+M F
Sbjct: 132 RRDANDKVKALLKDKEISEDEDRKSQDEIQKITDLMIKKIDAALADKEKELMDF 185


>gi|322411286|gb|EFY02194.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++++ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFAQSHHSLSREYASIRAGRANASLLDRIQIDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IS+RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  IK ID    EK+KE++
Sbjct: 126 ISIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEIDRMTAEKEKELL 183


>gi|222152659|ref|YP_002561834.1| ribosome recycling factor [Streptococcus uberis 0140J]
 gi|254809534|sp|B9DRF1|RRF_STRU0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|222113470|emb|CAR41195.1| ribosome recycling factor [Streptococcus uberis 0140J]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 77/183 (42%), Positives = 115/183 (62%), Gaps = 2/183 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N +I+  N   R   +   L ++  ++R GR + S+LD ++VE YG   PLNQ+A++TV 
Sbjct: 3   NAIIEKAN--QRFEQSFQSLSREYASIRAGRANASLLDRIQVEYYGVPTPLNQLASITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L++S +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K     
Sbjct: 61  EARVLLISPFDKSSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKV 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E  KI++RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  IK+ID    EK+K
Sbjct: 121 GENQKIAIRNIRRDAMDEAKKQEKNKEITEDELKALEKDIQKATDQAIKHIDGMTSEKEK 180

Query: 182 EIM 184
           E++
Sbjct: 181 ELL 183


>gi|37680738|ref|NP_935347.1| ribosome recycling factor [Vibrio vulnificus YJ016]
 gi|320155595|ref|YP_004187974.1| ribosome recycling factor [Vibrio vulnificus MO6-24/O]
 gi|39932018|sp|Q7MIG3|RRF_VIBVY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|37199487|dbj|BAC95318.1| ribosome recycling factor [Vibrio vulnificus YJ016]
 gi|319930907|gb|ADV85771.1| ribosome recycling factor [Vibrio vulnificus MO6-24/O]
          Length = 185

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PL QVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNSLSKVRTGRAHPSLLSGISVDYYGAATPLTQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     +++IQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANSDLKALLKEKEISEDEDRKAQDEIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|300704228|ref|YP_003745831.1| ribosome recycling factor (ribosome-releasing factor) [Ralstonia
           solanacearum CFBP2957]
 gi|299071892|emb|CBJ43221.1| Ribosome recycling factor (Ribosome-releasing factor) [Ralstonia
           solanacearum CFBP2957]
          Length = 186

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 110/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVANV + + R + V  W+
Sbjct: 13  KMQKSIDAFKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVANVGLADARTISVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K++V++VE+ I E++LGLNP   G V+R+P+P  TEERR  L KV  +  E +K++VRN+
Sbjct: 73  KKLVSAVEKAIREADLGLNPATMGDVIRVPMPALTEERRKELTKVVKSEGEDAKVAVRNV 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  +  KK  K    SED     ++D+QK+TD  +  +D    EK KEIM
Sbjct: 133 RRDANEQFKKLVKDKAISEDDERRGQDDVQKLTDRFVAEVDKLVAEKDKEIM 184


>gi|221124412|ref|XP_002163993.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
 gi|260220938|emb|CBA29007.1| Ribosome-recycling factor [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 186

 Score =  152 bits (384), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 112/172 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I+ LK ++  +RTGR +P++LD V V+ YGS VPL+QVAN+++++ R + V  W+
Sbjct: 13  KMDQSIASLKNNLTKIRTGRANPALLDTVHVDYYGSMVPLSQVANLSLIDARTISVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M   +E+ I +S+LGLNP   G+++R+P+P  TEERR  L KV     E +K++VRN+
Sbjct: 73  KNMAPKIEKAIRDSDLGLNPSSMGELIRVPMPAMTEERRKELTKVVRGEGEGAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + +K+  K   ASED     E D+QK TD  I  ID     K+++IM
Sbjct: 133 RRDANEAVKRLVKDKLASEDDQKRCEADVQKTTDKHITEIDRLVASKEQDIM 184


>gi|237729478|ref|ZP_04559959.1| ribosome releasing factor [Citrobacter sp. 30_2]
 gi|226909207|gb|EEH95125.1| ribosome releasing factor [Citrobacter sp. 30_2]
          Length = 185

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMDKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE ++++VRN+
Sbjct: 72  RSMGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEGARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   EK+ E+M F
Sbjct: 132 RRDANDKVKALLKEKEISEDDDRRSQDDVQKLTDAAIKKVDAALAEKEAELMQF 185


>gi|262166334|ref|ZP_06034071.1| ribosome recycling factor [Vibrio mimicus VM223]
 gi|262170774|ref|ZP_06038452.1| ribosome recycling factor [Vibrio mimicus MB-451]
 gi|261891850|gb|EEY37836.1| ribosome recycling factor [Vibrio mimicus MB-451]
 gi|262026050|gb|EEY44718.1| ribosome recycling factor [Vibrio mimicus VM223]
          Length = 185

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+++   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRDLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + DIQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKGLLKDKEISEDDERRAQEDIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|281355491|ref|ZP_06241985.1| ribosome recycling factor [Victivallis vadensis ATCC BAA-548]
 gi|281318371|gb|EFB02391.1| ribosome recycling factor [Victivallis vadensis ATCC BAA-548]
          Length = 188

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 116/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++++ M  T   LK     +RTG+ SP++++ + VE YG+   L  +A +T  EPR+L
Sbjct: 9   LDSLEEHMMKTEDALKNSFAAIRTGKASPALVEGITVEYYGTQTRLRDIAGITAPEPRLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD   V+++E+ I  SN+G+ P+ +G+ L++P+PE +++RR ALVK A +  E +K
Sbjct: 69  VIQPWDASAVSAIEKAILASNVGITPMSDGRTLKLPIPELSQDRRAALVKQAKSEVEDAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRR+G D  KK++K G  +ED    +  DIQK+TD  I  +D  F  K+KE+M
Sbjct: 129 VALRNIRREGNDAAKKAQKDGLLTEDEHKKMLEDIQKLTDRYIAGLDKEFSAKEKELM 186


>gi|186476093|ref|YP_001857563.1| ribosome recycling factor [Burkholderia phymatum STM815]
 gi|238691306|sp|B2JIC3|RRF_BURP8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|184192552|gb|ACC70517.1| ribosome recycling factor [Burkholderia phymatum STM815]
          Length = 186

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 112/172 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++   K D+  +RTGR    +LD ++V+ YGS VP++QVAN+T+++ R + V  W+
Sbjct: 13  KMQRSLDAFKNDLSKIRTGRAHTGLLDHIQVDYYGSPVPISQVANLTLVDARTIGVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MVA VE+ I ES+LGLNP   G V+R+P+P  TEERR  L KV  +  E +K++VRN+
Sbjct: 73  KKMVAVVEKAIRESDLGLNPASHGDVIRVPMPPLTEERRKELTKVVKSEGETAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM
Sbjct: 133 RRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVQTKEGEIM 184


>gi|91784116|ref|YP_559322.1| ribosome recycling factor [Burkholderia xenovorans LB400]
 gi|296158901|ref|ZP_06841729.1| ribosome recycling factor [Burkholderia sp. Ch1-1]
 gi|122970345|sp|Q13XB9|RRF_BURXL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91688070|gb|ABE31270.1| ribosome recycling factor [Burkholderia xenovorans LB400]
 gi|295890776|gb|EFG70566.1| ribosome recycling factor [Burkholderia sp. Ch1-1]
          Length = 186

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + V  W+
Sbjct: 13  KMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIGVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV  VE+ I ES+LGLNP  +G V+R+P+P  TEERR  L KV  + AE +K++VRN+
Sbjct: 73  KKMVPVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM
Sbjct: 133 RRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDRFVAEIDKLVVTKEAEIM 184


>gi|310659006|ref|YP_003936727.1| ribosome recycling factor [Clostridium sticklandii DSM 519]
 gi|308825784|emb|CBH21822.1| ribosome recycling factor [Clostridium sticklandii]
          Length = 185

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 119/178 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++++M  TI+ LK +++T+R GR +P+MLD V V+ YG+  PL Q+A V+  EPR ++
Sbjct: 7   KKLEEKMEKTIAVLKDELLTIRAGRANPNMLDRVMVDYYGTMTPLKQMAGVSSPEPRTIL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  + S+E+ I  S+LG NP  +G  +RI +P+ TEERR  L+K+     E++K+
Sbjct: 67  IQPWDKSAMGSIEKAILSSDLGFNPTNDGNSIRINIPQLTEERRKDLIKLVAKTGEQAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RN RR+  + +KK  K+ + +ED     ++++QK+TDS IK ID    +K+K+IM 
Sbjct: 127 AIRNERREANEAIKKMEKTSELTEDDSKKAQDEVQKLTDSHIKMIDDMLAKKEKDIME 184


>gi|210615979|ref|ZP_03290879.1| hypothetical protein CLONEX_03098 [Clostridium nexile DSM 1787]
 gi|210149984|gb|EEA80993.1| hypothetical protein CLONEX_03098 [Clostridium nexile DSM 1787]
          Length = 185

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 112/178 (62%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ    +M  T+  L  ++ T+R GR +P +LD + V+ YGS  P+ QVAN++V E RM+
Sbjct: 7   LQVYDTKMQKTLHSLDAELATIRAGRANPHILDKLTVDYYGSATPIQQVANISVPEARMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K MV  +E+ I  S++G+NP  +G V+R+  PE TEERR  LVK      E +K
Sbjct: 67  QIQPWEKSMVKEIEKAILTSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKKKGEAAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRDG D  KK + S   SED +  LE ++QK+TD  IK +D   E K KE++
Sbjct: 127 VAVRNIRRDGNDAFKKLKGSD-VSEDEIKGLEEELQKLTDKYIKEVDKSVEAKSKEVL 183


>gi|150021158|ref|YP_001306512.1| ribosome recycling factor [Thermosipho melanesiensis BI429]
 gi|166231524|sp|A6LMH6|RRF_THEM4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149793679|gb|ABR31127.1| ribosome recycling factor [Thermosipho melanesiensis BI429]
          Length = 185

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  +++ + +++  LRTGR SP++L+ +KV+ YG   P+NQVA V V E R L
Sbjct: 6   VKKTEEKMKKSVNSIDEELKKLRTGRPSPALLEEIKVDYYGVPTPINQVATVNVTEERSL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+K ++ +VE+ I  S+LGLNP+ +G V+R+  P  T E+R   VK A    E  K
Sbjct: 66  IIKPWEKNLLNAVEKAIQASDLGLNPMNDGNVIRLVFPTPTTEQRQKWVKKAKDIVEHGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRR+ +  LK  +K+G+ SED    LE +IQ +TD  ++ +D  FE K+KEIM F
Sbjct: 126 IAVRNIRREILKELKDLKKNGEISEDDERRLEKEIQNLTDKYVEELDKLFERKEKEIMEF 185


>gi|121604663|ref|YP_981992.1| ribosome recycling factor [Polaromonas naphthalenivorans CJ2]
 gi|166230814|sp|A1VN43|RRF_POLNA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120593632|gb|ABM37071.1| ribosome recycling factor [Polaromonas naphthalenivorans CJ2]
          Length = 186

 Score =  152 bits (383), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q    +M  ++   + ++  +RTGR +P +LD V V+ YGS VP++QVANV +L+ R + 
Sbjct: 8   QQATQKMQQSLESFQHNLTKIRTGRANPGLLDTVHVDYYGSMVPISQVANVALLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VS W+K M A +E+ I +S+LGLNP  +G ++R+P+P  TEERR  L KV  A  E +K+
Sbjct: 68  VSPWEKGMGAKIEKAIRDSDLGLNPASQGDLIRVPMPAMTEERRKELTKVVRAEGEHAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  D +KK  K   ASED     + +IQK TD  I ++D     K+++IM
Sbjct: 128 AIRNLRRDANDGVKKLVKDKLASEDDERRSQEEIQKFTDRFIADVDKLVTGKEQDIM 184


>gi|262404591|ref|ZP_06081146.1| ribosome recycling factor [Vibrio sp. RC586]
 gi|262349623|gb|EEY98761.1| ribosome recycling factor [Vibrio sp. RC586]
          Length = 185

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+++   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRDLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + DIQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKGLLKDKEISEDDERRAQEDIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|332527873|ref|ZP_08403910.1| ribosome recycling factor [Rubrivivax benzoatilyticus JA2]
 gi|332112450|gb|EGJ12243.1| ribosome recycling factor [Rubrivivax benzoatilyticus JA2]
          Length = 186

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/182 (42%), Positives = 114/182 (62%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIK-DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + D+Q    ++M  ++   K ++  +RTGR  P +LD V VE YGS +P++QVANV++L+
Sbjct: 3   IADIQKTAAEKMAKSVDAFKNELHKIRTGRAHPGILDQVHVEYYGSMLPISQVANVSLLD 62

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R + V  W+K M   +E+ I ES+LGLNP  +G +LR+P+P  TEERR  L KV     
Sbjct: 63  ARTISVQPWEKGMGPKIEKAIRESDLGLNPSAQGDLLRVPMPALTEERRKELTKVVRHTG 122

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E++KI VR +RRD  D LKK  K    SED     ++++Q++TD TI  ID   + K+ E
Sbjct: 123 EEAKIHVRAVRRDANDQLKKLVKDKLVSEDDERRGQDEVQRLTDRTIAEIDKLVQAKEAE 182

Query: 183 IM 184
           +M
Sbjct: 183 VM 184


>gi|319779547|ref|YP_004130460.1| Ribosome recycling factor [Taylorella equigenitalis MCE9]
 gi|317109571|gb|ADU92317.1| Ribosome recycling factor [Taylorella equigenitalis MCE9]
          Length = 186

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/172 (45%), Positives = 109/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  +I  LK ++  +RTGR    +LD V V+ YGS VP++QVANV+V++ R L V  W+
Sbjct: 13  RMNKSIESLKTNLSKIRTGRAHAGILDHVTVDYYGSLVPVSQVANVSVVDARTLSVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M   +++ I ES+LGLNPI  G+ +R+P+P  TEERR  L KV  A  E +K+++RN+
Sbjct: 73  KNMAGPIDKAIRESDLGLNPITLGEAIRVPMPALTEERRRDLTKVVRAEGEDAKVAIRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  D LKK  K  + SED     +  IQK+TD  +  ID    EK+ EIM
Sbjct: 133 RRDSNDTLKKLLKDKEISEDDDRRAQEVIQKMTDKFVGEIDKIVSEKEAEIM 184


>gi|226227179|ref|YP_002761285.1| ribosome recycling factor [Gemmatimonas aurantiaca T-27]
 gi|226090370|dbj|BAH38815.1| ribosome recycling factor [Gemmatimonas aurantiaca T-27]
          Length = 184

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/178 (44%), Positives = 113/178 (63%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ K  M   I   KK+  ++R+G+ SP+MLD +KVEAYGS VPLNQVA++   EPR+L
Sbjct: 8   LKDAKSGMEKAIENSKKEFSSVRSGKASPNMLDTIKVEAYGSFVPLNQVASIAAPEPRIL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK     +E+ I ES LGL+P  +G V+R+P+P   E+RR  LVKV H  AE  +
Sbjct: 68  LVTPFDKGQAKVIEKAIRESELGLDPAHQGGVIRVPLPSMNEQRRKELVKVLHKMAEDGR 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I+VR+ R DG D LK   K    SED     E D+QK+ D  I  +D+  + K+ E+M
Sbjct: 128 IAVRHARTDGRDKLK---KLDGVSEDDKKHTEKDLQKVHDDFIGKLDALVKAKEAELM 182


>gi|167950442|ref|ZP_02537516.1| ribosome recycling factor [Endoriftia persephone 'Hot96_1+Hot96_2']
 gi|110589434|gb|ABG77226.1| ribosome recycling factor [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 173

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 110/173 (63%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++  L  ++  +RTGR  PS+LD +KV+ YGS  PLNQVAN+ + + R L V+ W+K
Sbjct: 1   MDKSVQALHNELAKIRTGRAHPSLLDHIKVDYYGSETPLNQVANINIEDARTLAVTPWEK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            MV +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  ++++A   AE ++++VRNIR
Sbjct: 61  TMVQAVEKAIMTSDLGLNPMSAGTVIRVPMPPLTEERRKDMIRIARNEAEGARVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD    LK   K    SED     +  IQK+TD  +K ID     K+K++M F
Sbjct: 121 RDANHDLKDLVKEKMISEDDERRGQEIIQKLTDQHVKTIDEVLAVKEKDLMEF 173


>gi|83589883|ref|YP_429892.1| ribosome recycling factor [Moorella thermoacetica ATCC 39073]
 gi|123524654|sp|Q2RJP0|RRF_MOOTA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|83572797|gb|ABC19349.1| ribosome recycling factor [Moorella thermoacetica ATCC 39073]
          Length = 185

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  +++M   +  L++++ +LR GR +P++L+ V V  YG+  P+NQ+A V+  E R+L
Sbjct: 6   LQEAEEKMKKAVEGLRRELASLRAGRANPALLEKVLVSYYGTPTPVNQLATVSSPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD+ ++  +E+ I +S+LGL P  +G V+RI +P+ TEERR  LVKVA   AE+ +
Sbjct: 66  VIQPWDRNILPEIEKAILKSDLGLTPSSDGTVIRITIPQLTEERRSELVKVARKKAEEFR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           + VRN RR+  D LK S K+ +ASED V   +  +QK TD+ I+ ID     K+ EIM 
Sbjct: 126 VMVRNARREANDKLKASEKNKEASEDEVKRAQEKVQKTTDNYIQIIDKILATKEAEIME 184


>gi|217077680|ref|YP_002335398.1| ribosome recycling factor [Thermosipho africanus TCF52B]
 gi|226703270|sp|B7IDI0|RRF_THEAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|217037535|gb|ACJ76057.1| frr ribosome recycling factor [Thermosipho africanus TCF52B]
          Length = 185

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  + +++  LRTGR SP++L+ +K++ YG   P+NQVA + V E R L++  W+
Sbjct: 12  RMKKSVEAIDEELKKLRTGRPSPALLEEIKIDYYGVPTPINQVATINVTEERSLIIKPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K +++++E+ I  S+LGLNP  +G V+R+  P  T E+R   VK      E  KI+VRNI
Sbjct: 72  KNLLSAIEKAIQASDLGLNPTNDGNVVRLVFPSPTTEQRQKWVKKTKEIVEHGKIAVRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD +  LK+  K+G+ SED    LE ++Q +TD  I+ +D  FE K+KEIM F
Sbjct: 132 RRDVIKELKEMTKNGEISEDDEKRLEKEVQNLTDKYIEELDKLFERKEKEIMEF 185


>gi|161507690|ref|YP_001577644.1| ribosome recycling factor [Lactobacillus helveticus DPC 4571]
 gi|172048311|sp|A8YVR6|RRF_LACH4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|160348679|gb|ABX27353.1| ribosome recycling factor Rrf [Lactobacillus helveticus DPC 4571]
 gi|323466331|gb|ADX70018.1| Ribosome-recycling factor [Lactobacillus helveticus H10]
          Length = 185

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D M  +I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQDNMDKSIKVYQKRLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE +K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RR+ MD LKK +K G  +ED   +LE  +QKITD + K ID   +EK+KEI  
Sbjct: 126 IAVRNVRREAMDALKKEQKDGNITEDEQRNLEKQVQKITDDSTKKIDQLADEKRKEITQ 184


>gi|251781912|ref|YP_002996214.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390541|dbj|BAH81000.1| ribosome releasing factor [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323126728|gb|ADX24025.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 185

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFAQSHHSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  IK ID    EK+KE++
Sbjct: 126 IAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEIDRMTAEKEKELL 183


>gi|213964585|ref|ZP_03392785.1| ribosome recycling factor [Corynebacterium amycolatum SK46]
 gi|213952778|gb|EEB64160.1| ribosome recycling factor [Corynebacterium amycolatum SK46]
          Length = 185

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++ G ++   ++++  +RTGR +P+M + V  E YG   P+ Q+A ++V EPRML
Sbjct: 6   LLDCEEKYGSSVEHCREELTHIRTGRANPAMFNGVIAEYYGVPTPITQMATISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++  ++  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VKV+ +  E +K
Sbjct: 66  LIKPYELSVMGDIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRREMVKVSRSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RN+RR GM+ LKK +K G A ED V + E ++ ++T + ++ +DS  E K+ E+M 
Sbjct: 126 IAIRNVRRKGMETLKKIQKDGDAGEDEVQAGEKELDQVTKNYVEQVDSLVERKEAELME 184


>gi|313673948|ref|YP_004052059.1| ribosome recycling factor [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940704|gb|ADR19896.1| ribosome recycling factor [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 184

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 118/184 (64%), Gaps = 2/184 (1%)

Query: 4   VIDLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           V DL N  K++M  T+   K ++ ++RTGR S S+ D +KV+ YG+  PL+QVA +   E
Sbjct: 2   VSDLFNKTKEKMEKTLEHYKTELKSVRTGRASVSLFDNIKVDYYGTPTPLSQVAALNA-E 60

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           PRM+++  W+  M+  +E+ I  SNLGL P  +G+V+R+P+P  TEERR  +VK+    +
Sbjct: 61  PRMIIIQPWEPSMIKPIEKAILTSNLGLTPSNDGRVIRVPIPPLTEERRKEIVKLVKKMS 120

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E++KI++RN RRD ++ LKK  K  + SED        IQK+TD  IK ID   E+K+KE
Sbjct: 121 EEAKIAIRNERRDAIEKLKKMEKDKEISEDDNKKGAEQIQKLTDEYIKKIDEVTEKKEKE 180

Query: 183 IMHF 186
           IM  
Sbjct: 181 IMEI 184


>gi|152968766|ref|YP_001333875.1| ribosome releasing factor [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|150953615|gb|ABR75645.1| ribosome releasing factor [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
          Length = 173

 Score =  152 bits (383), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 112/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D+
Sbjct: 1   MEKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+R
Sbjct: 61  SMSAAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 121 RDANDKVKALLKEKEISEDDDRRSQDDVQKMTDAAIKKVDAALADKEAELMQF 173


>gi|168335176|ref|ZP_02693282.1| ribosome recycling factor [Epulopiscium sp. 'N.t. morphotype B']
          Length = 180

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D+M  +I  LK+D  T+R GR +P++LD + V+ YG+  P+ QV N+ V E R+L
Sbjct: 1   MKKFEDKMEKSILSLKEDFNTIRAGRANPNVLDKIVVDYYGTLTPIKQVGNIVVPEARIL 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD  ++  +E+ I+ES++G+NP  +G+V+R+  PE T+ERR  L K      E +K
Sbjct: 61  QIQPWDSSLLKGIEKAINESDIGINPSNDGKVIRLVFPELTQERRKELTKEIKKKGENAK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRR+ MD  KK +K+ + +ED   + EN +QK+TD  +  ID   E+K  E++
Sbjct: 121 VAIRNIRREAMDSFKKQQKANEITEDEQTTNENSVQKLTDKFVAEIDKLIEQKSSEVL 178


>gi|15642255|ref|NP_231888.1| ribosome recycling factor [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147673161|ref|YP_001217772.1| ribosome recycling factor [Vibrio cholerae O395]
 gi|153803002|ref|ZP_01957588.1| ribosome recycling factor [Vibrio cholerae MZO-3]
 gi|153827697|ref|ZP_01980364.1| ribosome recycling factor [Vibrio cholerae MZO-2]
 gi|227082381|ref|YP_002810932.1| ribosome recycling factor [Vibrio cholerae M66-2]
 gi|229507669|ref|ZP_04397174.1| ribosome recycling factor [Vibrio cholerae BX 330286]
 gi|229512136|ref|ZP_04401615.1| ribosome recycling factor [Vibrio cholerae B33]
 gi|229519271|ref|ZP_04408714.1| ribosome recycling factor [Vibrio cholerae RC9]
 gi|229522203|ref|ZP_04411620.1| ribosome recycling factor [Vibrio cholerae TM 11079-80]
 gi|229524260|ref|ZP_04413665.1| ribosome recycling factor [Vibrio cholerae bv. albensis VL426]
 gi|229528740|ref|ZP_04418130.1| ribosome recycling factor [Vibrio cholerae 12129(1)]
 gi|229607173|ref|YP_002877821.1| ribosome recycling factor [Vibrio cholerae MJ-1236]
 gi|254286071|ref|ZP_04961032.1| ribosome recycling factor [Vibrio cholerae AM-19226]
 gi|254849387|ref|ZP_05238737.1| ribosome recycling factor [Vibrio cholerae MO10]
 gi|255747047|ref|ZP_05420992.1| ribosome recycling factor [Vibrio cholera CIRS 101]
 gi|262161409|ref|ZP_06030519.1| ribosome recycling factor [Vibrio cholerae INDRE 91/1]
 gi|297580900|ref|ZP_06942825.1| ribosome recycling factor [Vibrio cholerae RC385]
 gi|298500368|ref|ZP_07010173.1| ribosome recycling factor [Vibrio cholerae MAK 757]
 gi|22001952|sp|Q9KPV5|RRF_VIBCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|172047609|sp|A5F618|RRF_VIBC3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809542|sp|C3LQ29|RRF_VIBCM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|9656818|gb|AAF95401.1| ribosome recycling factor [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|124121445|gb|EAY40188.1| ribosome recycling factor [Vibrio cholerae MZO-3]
 gi|146315044|gb|ABQ19583.1| ribosome recycling factor [Vibrio cholerae O395]
 gi|149737829|gb|EDM52734.1| ribosome recycling factor [Vibrio cholerae MZO-2]
 gi|150423981|gb|EDN15921.1| ribosome recycling factor [Vibrio cholerae AM-19226]
 gi|227010269|gb|ACP06481.1| ribosome recycling factor [Vibrio cholerae M66-2]
 gi|227014153|gb|ACP10363.1| ribosome recycling factor [Vibrio cholerae O395]
 gi|229332514|gb|EEN98000.1| ribosome recycling factor [Vibrio cholerae 12129(1)]
 gi|229337841|gb|EEO02858.1| ribosome recycling factor [Vibrio cholerae bv. albensis VL426]
 gi|229341128|gb|EEO06133.1| ribosome recycling factor [Vibrio cholerae TM 11079-80]
 gi|229343960|gb|EEO08935.1| ribosome recycling factor [Vibrio cholerae RC9]
 gi|229352101|gb|EEO17042.1| ribosome recycling factor [Vibrio cholerae B33]
 gi|229355174|gb|EEO20095.1| ribosome recycling factor [Vibrio cholerae BX 330286]
 gi|229369828|gb|ACQ60251.1| ribosome recycling factor [Vibrio cholerae MJ-1236]
 gi|254845092|gb|EET23506.1| ribosome recycling factor [Vibrio cholerae MO10]
 gi|255735449|gb|EET90849.1| ribosome recycling factor [Vibrio cholera CIRS 101]
 gi|262028720|gb|EEY47374.1| ribosome recycling factor [Vibrio cholerae INDRE 91/1]
 gi|297534726|gb|EFH73562.1| ribosome recycling factor [Vibrio cholerae RC385]
 gi|297541061|gb|EFH77115.1| ribosome recycling factor [Vibrio cholerae MAK 757]
 gi|327484773|gb|AEA79180.1| Ribosome recycling factor [Vibrio cholerae LMA3894-4]
          Length = 185

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRELTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + +IQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|91761973|ref|ZP_01263938.1| Ribosome recycling factor [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717775|gb|EAS84425.1| Ribosome recycling factor [Candidatus Pelagibacter ubique HTCC1002]
          Length = 183

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 80/172 (46%), Positives = 110/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  TI   +K++ +LRTGR + SMLDLVKV+ YG  +PLNQV+++T  + R + + VWD
Sbjct: 10  KMDKTIEVFQKELTSLRTGRANASMLDLVKVDVYGQAMPLNQVSSITTPDARTINIQVWD 69

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              V  V+  I +S LGLNP ++GQ++R+PVP+  EERR  + K+  +  EK KIS+RNI
Sbjct: 70  LNNVPLVDTAIKKSELGLNPQIDGQLIRLPVPDLNEERRTEIKKLIKSMGEKCKISIRNI 129

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+  D LK   K    SED     E  +Q  TD  IK ID+  E K+KEIM
Sbjct: 130 RREANDDLKNLVKEKIISEDEEKINEKLVQSFTDEHIKIIDTKVEAKEKEIM 181


>gi|319939517|ref|ZP_08013877.1| ribosome-recycling factor [Streptococcus anginosus 1_2_62CV]
 gi|319811503|gb|EFW07798.1| ribosome-recycling factor [Streptococcus anginosus 1_2_62CV]
          Length = 185

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 115/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGSIRAGRANASLLDRISVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERALNASDLGITPASDGTVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++ 
Sbjct: 126 IAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDEAVKHIDDMTASKEKELIE 184


>gi|196234716|ref|ZP_03133527.1| ribosome recycling factor [Chthoniobacter flavus Ellin428]
 gi|196221224|gb|EDY15783.1| ribosome recycling factor [Chthoniobacter flavus Ellin428]
          Length = 186

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 113/171 (66%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M     +++ +   +RTG+ SP++++ + VEAYGS + L Q+A +T  EPR+LV+  +D 
Sbjct: 14  MEKGFEYMQHEFAAVRTGKASPALVENIDVEAYGSQMKLKQLALITTPEPRLLVIQPFDG 73

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
                +ER I ES +G+NP V+G+++R+P+P  +EERR  LVK     AE++++ +R+ R
Sbjct: 74  STTKDIERAIKESKIGINPAVDGKIIRLPIPALSEERRKDLVKGIKQMAEEARVRIRSAR 133

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RDG+D LKK++K GK +ED + S E +IQK+TD   K ID     K+ +I+
Sbjct: 134 RDGIDGLKKAQKDGKITEDDLESYEKEIQKLTDGFTKKIDDAVNAKEADIL 184


>gi|116872745|ref|YP_849526.1| ribosome recycling factor [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123458442|sp|A0AIB5|RRF_LISW6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116741623|emb|CAK20747.1| ribosome recycling factor [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 185

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LTKSKEKMDKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAPTPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTVLGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNID+  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDNITKDKEAEILEV 185


>gi|258423900|ref|ZP_05686785.1| ribosome recycling factor [Staphylococcus aureus A9635]
 gi|257845929|gb|EEV69958.1| ribosome recycling factor [Staphylococcus aureus A9635]
          Length = 184

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 114/176 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+LV+S 
Sbjct: 9   KSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLLVISP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR   VK      E++K+SVR
Sbjct: 69  YDKSSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD  D LKK  K+G  +ED + S   D+QK TD++IK ID    +K+K+IM  
Sbjct: 129 NIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKDIMSV 184


>gi|258620999|ref|ZP_05716033.1| Ribosome-recycling factor [Vibrio mimicus VM573]
 gi|258586387|gb|EEW11102.1| Ribosome-recycling factor [Vibrio mimicus VM573]
          Length = 185

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+++   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRDLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K    SED     + DIQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKGLLKDKDISEDDERRAQEDIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|160944136|ref|ZP_02091366.1| hypothetical protein FAEPRAM212_01638 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444812|gb|EDP21816.1| hypothetical protein FAEPRAM212_01638 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105052|emb|CBL02596.1| ribosome recycling factor [Faecalibacterium prausnitzii SL3/3]
          Length = 184

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 112/174 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +D+M  ++  L +++  +R GR +P++LD V V+ YG+  P+ Q+A V V E R L ++ 
Sbjct: 9   EDKMKSSVEHLSRELAAVRAGRANPAVLDKVVVDYYGAPTPIQQLAAVAVSEARTLTITP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD+ ++  + + I  S++G+ PI +G  +R+  P   EERR  L K      E +K++VR
Sbjct: 69  WDRTLLRPISKAIMASDVGITPIDDGVTIRLNFPAPNEERRKQLAKEVSKLGEDAKVAVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N+RRD MD  K  +K+G+ +ED   ++E D+QK+TD  IKNID+  EEK+KEIM
Sbjct: 129 NVRRDAMDKAKAMKKAGELTEDTQKTMEEDVQKLTDKYIKNIDAAVEEKQKEIM 182


>gi|121998245|ref|YP_001003032.1| ribosome recycling factor [Halorhodospira halophila SL1]
 gi|166230792|sp|A1WX18|RRF_HALHL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|121589650|gb|ABM62230.1| ribosome recycling factor [Halorhodospira halophila SL1]
          Length = 185

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 113/182 (62%), Gaps = 1/182 (0%)

Query: 6   DLQNIKDR-MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   DR M   +  LK D+  LRTGR   S+LD V VE YG  VP+ Q ANV+V + R
Sbjct: 4   DIQEDADRRMAKAVESLKHDLARLRTGRAHTSLLDQVNVEYYGMEVPIKQAANVSVEDSR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L V+ ++K MV ++E+ I  SNLGL+P+  GQV+R+P+P  TE+RR  +V++    AE+
Sbjct: 64  TLAVTPFEKHMVPAIEKAIMASNLGLSPVSAGQVIRVPLPSLTEDRRKEMVRLVKNEAEQ 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRD    LK   K    +ED     +  IQK+TD  +  +D   EEK++E+M
Sbjct: 124 ARVAIRNVRRDANSDLKDLAKGKDITEDEERRAQEAIQKLTDRYVAQVDDLLEEKERELM 183

Query: 185 HF 186
             
Sbjct: 184 EV 185


>gi|169830793|ref|YP_001716775.1| ribosome recycling factor [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637637|gb|ACA59143.1| ribosome recycling factor [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 174

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 113/174 (64%), Gaps = 1/174 (0%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  TI  L ++  +LR GR +P++LD + V+ YGS +P+NQ+A V+V E R+LV+  WDK
Sbjct: 1   MMKTIEVLDREFASLRAGRATPALLDRITVDYYGSTIPINQLATVSVPEARLLVIQPWDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +ER I +S+LG+ P  +G ++R+ VP+ TEERR  LVK      E++K++VRNIR
Sbjct: 61  SAIGEIERAILKSDLGITPSSDGNIIRLAVPQLTEERRRDLVKFLKKRGEEAKVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD ++ LK  +K G   SED +   +++ QK+TD  +K ID     K+KE+M  
Sbjct: 121 RDVIERLKALQKEGGGFSEDDLRREQDEAQKLTDRYVKEIDRIVAAKEKEVMEI 174


>gi|323339424|ref|ZP_08079706.1| ribosome recycling factor [Lactobacillus ruminis ATCC 25644]
 gi|323093135|gb|EFZ35725.1| ribosome recycling factor [Lactobacillus ruminis ATCC 25644]
          Length = 240

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 121/179 (67%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L   +++M    + L+ ++  +R G  + S+L+ V VE YG+  PLNQ+A ++V E R+
Sbjct: 60  ELVKYQEKMQKAEAALQHELGGIRAGVANASLLNRVMVEYYGAPTPLNQMAQISVPEARV 119

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L+V+ +DK  +  VE  +  S+LGL P+ +G  +R+ +P+ TEERR  L K   A AEK 
Sbjct: 120 LLVTPYDKSSLKDVEHALLASDLGLTPMNDGSAIRLVIPQLTEERRKELAKQVRAAAEKG 179

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           K++VRN+RR+ MD LKK++K+G  SED++  LE++ QKITD++IKNID     K+KEI+
Sbjct: 180 KVAVRNVRREMMDSLKKAQKNGDMSEDVLHDLEDEAQKITDASIKNIDGITAAKEKEIL 238


>gi|299823044|ref|ZP_07054930.1| ribosome recycling factor [Listeria grayi DSM 20601]
 gi|299816573|gb|EFI83811.1| ribosome recycling factor [Listeria grayi DSM 20601]
          Length = 185

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 116/175 (66%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM      L K + T+R GR + S+LD + V+ YG+  P+NQ+A++++ E R+LV++ 
Sbjct: 10  KARMEKAEHSLSKQLGTIRAGRANASLLDRITVDYYGAPTPINQIASISIPEARLLVITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  VE+ I +S+LGL+P  +G VLR+ +P+ TEERR  LVK     AE++K+++R
Sbjct: 70  FDKNSLEDVEKAILKSDLGLSPNNDGTVLRLSIPQPTEERRRELVKEVKKEAEEAKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD  + LKK  KSG+ +ED + S   D+Q ITD +IK ID   + K+ EIM 
Sbjct: 130 NIRRDANEELKKLEKSGEITEDDLRSYGEDVQAITDESIKRIDEIAKNKEAEIME 184


>gi|261211375|ref|ZP_05925663.1| ribosome recycling factor [Vibrio sp. RC341]
 gi|260839330|gb|EEX65956.1| ribosome recycling factor [Vibrio sp. RC341]
          Length = 185

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQ+ANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQIANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+++   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRDLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + DIQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKGLLKDKEISEDDERRAQEDIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|293394705|ref|ZP_06638997.1| ribosome recycling factor [Serratia odorifera DSM 4582]
 gi|291422831|gb|EFE96068.1| ribosome recycling factor [Serratia odorifera DSM 4582]
          Length = 173

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 113/173 (65%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   K  +  +RTGR SPS+LD + VE YG+  PL Q+A++TV + R L ++V+D+
Sbjct: 1   MEKSVEAFKNQISKIRTGRASPSILDGIMVEYYGAATPLRQLASITVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            +  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+R
Sbjct: 61  SLSPAVEKAIMSSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+KE+M F
Sbjct: 121 RDANDKIKALLKDKEISEDEERRAQDDVQKMTDAYIKLVDAALADKEKELMEF 173


>gi|239908426|ref|YP_002955168.1| ribosome recycling factor [Desulfovibrio magneticus RS-1]
 gi|259494539|sp|C4XMX9|RRF_DESMR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|239798293|dbj|BAH77282.1| ribosome recycling factor [Desulfovibrio magneticus RS-1]
          Length = 184

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +DRM   ++ L K+   LRTGR + S+LD V+V+ YG+   L+Q+A+V   + R +
Sbjct: 5   LKDAEDRMKKALAALDKEFSRLRTGRATTSLLDGVRVDYYGTATQLDQLASVATPDSRTI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++  A +E+ I +S LGL P+ +G+++RI +P  TE+RR  LVKVA  Y E++K
Sbjct: 65  TIQPWDRKAFADIEKAILKSGLGLTPVNDGKIIRISIPPLTEDRRKDLVKVAKKYVEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRD  + LKK +     SED     ++D+QK+TD+ I   D  F +K+KEIM  
Sbjct: 125 VAMRNVRRDANELLKKKKNDKAISEDDQRKGQDDVQKLTDNYIVKTDEAFSKKEKEIMEI 184


>gi|171463274|ref|YP_001797387.1| ribosome recycling factor [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238689053|sp|B1XTU6|RRF_POLNS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|171192812|gb|ACB43773.1| ribosome recycling factor [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 186

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 118/176 (67%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N   +M  ++  LK +++ +R+GR +P +L+ + V+ YG+  PL+QVA++ + + R + V
Sbjct: 9   NANQKMEKSLEALKTNLVKVRSGRANPGILEHIHVDYYGNPTPLSQVASLGLADARTINV 68

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             ++K MVA++E+ I +S+LGLNP+ +G V+R+P+P  TEERR  L KV  +  E +KI+
Sbjct: 69  QPFEKTMVAAIEKAIRDSDLGLNPVSQGTVIRVPMPALTEERRRELTKVVKSEGEDAKIA 128

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VRN+RRD  +HLK+  K  + SED      +DIQK+TD  + +ID    EK+KEIM
Sbjct: 129 VRNLRRDANEHLKRLTKDKEISEDDERRATDDIQKMTDKAVIDIDKIIAEKEKEIM 184


>gi|320540035|ref|ZP_08039691.1| ribosome recycling factor [Serratia symbiotica str. Tucson]
 gi|320029884|gb|EFW11907.1| ribosome recycling factor [Serratia symbiotica str. Tucson]
          Length = 199

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 116/174 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++   K  +  +RTGR SPS+LD + VE YG+  PL Q+A VTV + R L ++++D
Sbjct: 26  RMEKSVEAFKNQISKVRTGRASPSILDGIMVEYYGAATPLRQLAIVTVEDSRTLAINLFD 85

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + ++VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ +++VRN+
Sbjct: 86  RSLGSAVEKAIMSSDLGLNPNSAGSVIRVPLPPLTEERRRDLIKVVRAEAEQGRVAVRNV 145

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     +++IQK+TD+ IK +D+   +K+KE++ F
Sbjct: 146 RRDANDKVKALLKDKEISEDADRRSQDEIQKMTDAYIKLLDAALADKEKELLDF 199


>gi|300311496|ref|YP_003775588.1| ribosome recycling factor [Herbaspirillum seropedicae SmR1]
 gi|300074281|gb|ADJ63680.1| ribosome recycling factor (ribosome releasing factor) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 186

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 118/177 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I  LK ++  +RTGR    +LD V V+ YGS   L+QVAN+T+++ R + 
Sbjct: 8   KNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTLIDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K+MVA VE+ I E++LGLNP   G+++R+P+P  TEERR  +VK+    AE +KI
Sbjct: 68  VQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKGEAEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRR+G + LKK  K   ASED     +++IQK+TD  +  ID    +K+KE+M
Sbjct: 128 AVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKEKEVM 184


>gi|282878181|ref|ZP_06286977.1| ribosome recycling factor [Prevotella buccalis ATCC 35310]
 gi|281299599|gb|EFA91972.1| ribosome recycling factor [Prevotella buccalis ATCC 35310]
          Length = 186

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 117/178 (65%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  ++RM    +FL++ +  +R GR + ++LD V V +YGS VPLNQVANV+V + R +
Sbjct: 8   LQGAEERMQMATTFLEEQLNRIRAGRANVAILDGVMVSSYGSMVPLNQVANVSVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   EKSK
Sbjct: 68  AIKPWDRKAIRDIEKAIMDSDVGITPENNGEIIRLGIPQPTEERRRDLVKQCNKIGEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I VRN+R +  D LKK+ K G  SED     EN++QKI D  IK +D+  E+K KEIM
Sbjct: 128 IEVRNVRSEIKDKLKKAIKDG-LSEDAGKDAENELQKIHDKFIKQVDNLLEDKTKEIM 184


>gi|238918776|ref|YP_002932290.1| ribosome recycling factor, [Edwardsiella ictaluri 93-146]
 gi|259494541|sp|C5BHB9|RRF_EDWI9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238868344|gb|ACR68055.1| ribosome recycling factor, putative [Edwardsiella ictaluri 93-146]
          Length = 185

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K ++  +RTGR  P++LD ++VE YG+  PL Q+AN+   + R L ++V+D
Sbjct: 12  RMDKCVESFKGNISKIRTGRAHPNLLDGIQVEYYGTATPLRQLANIVAEDSRTLALTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+K+  + AE  ++SVRN+
Sbjct: 72  RSMSGAIEKAILTSDLGLNPASAGTVIRVPLPPLTEERRKDLIKLVRSEAESGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     + +IQKITD  IK ID+   +K+KE+M F
Sbjct: 132 RRDANDKVKALLKDKEISEDEDRKSQEEIQKITDLMIKKIDAALADKEKELMDF 185


>gi|269468297|gb|EEZ79979.1| ribosome recycling factor [uncultured SUP05 cluster bacterium]
          Length = 185

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+  +RM  TI  L+     +R GR  PS+L+ + V+ YGS VP++QVAN++  + R L 
Sbjct: 7   QDAGERMNKTIDSLENAFSKIRAGRAHPSLLEQIHVDYYGSMVPISQVANISAEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K+MVA +E+ I  S+LGLNP   GQV+RIP+P  TEERR  LV+V    AE++K+
Sbjct: 67  VTPWEKDMVAVIEKAIMTSDLGLNPQTMGQVMRIPLPPLTEERRRELVRVVKDEAEQAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD     K+  K  + SED     E++IQKITD  +K+++     K+  ++  
Sbjct: 127 AIRNIRRDANSDFKELLKEKEVSEDEARKAEDNIQKITDDHVKSVEDKLTHKEDSLLEI 185


>gi|227878826|ref|ZP_03996733.1| ribosome recycling factor [Lactobacillus crispatus JV-V01]
 gi|256843348|ref|ZP_05548836.1| ribosome recycling factor [Lactobacillus crispatus 125-2-CHN]
 gi|256849833|ref|ZP_05555264.1| ribosome-recycling factor [Lactobacillus crispatus MV-1A-US]
 gi|262046921|ref|ZP_06019881.1| ribosome recycling factor [Lactobacillus crispatus MV-3A-US]
 gi|293381207|ref|ZP_06627215.1| ribosome recycling factor [Lactobacillus crispatus 214-1]
 gi|295693144|ref|YP_003601754.1| ribosome-recycling factor [Lactobacillus crispatus ST1]
 gi|227861574|gb|EEJ69186.1| ribosome recycling factor [Lactobacillus crispatus JV-V01]
 gi|256614768|gb|EEU19969.1| ribosome recycling factor [Lactobacillus crispatus 125-2-CHN]
 gi|256713322|gb|EEU28312.1| ribosome-recycling factor [Lactobacillus crispatus MV-1A-US]
 gi|260572903|gb|EEX29463.1| ribosome recycling factor [Lactobacillus crispatus MV-3A-US]
 gi|290922247|gb|EFD99241.1| ribosome recycling factor [Lactobacillus crispatus 214-1]
 gi|295031250|emb|CBL50729.1| Ribosome-recycling factor [Lactobacillus crispatus ST1]
          Length = 185

 Score =  151 bits (382), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K +M D+I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IEKAKTKMTDSIKVYQKRLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    +AE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKFAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RRD M+ LKK  K+G  +ED   +LE  +QK+TD   K ID   +EK+KEI  
Sbjct: 126 IAVRNVRRDAMNTLKKDEKNGDITEDEQRNLEKQVQKVTDDAAKQIDQLADEKRKEITQ 184


>gi|304439992|ref|ZP_07399885.1| ribosome recycling factor [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371484|gb|EFM25097.1| ribosome recycling factor [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 184

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 115/175 (65%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           D+M  +I  LK D++++R GR +P++LD + VE YG   PLNQVA ++  E R+LVV  W
Sbjct: 10  DKMKKSIEVLKDDLLSIRAGRANPALLDKITVEYYGQVTPLNQVAGISAPEARLLVVQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D+ +++ +E+ I +S+LGLNP  +G+V+R+ +P+ TEERR  L K+     E +K+++RN
Sbjct: 70  DQSLISVIEKEILKSDLGLNPSNDGKVVRLIIPQLTEERRRDLTKIVKKNGEDTKVAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IRR  +D +KK  K  + SED     E+ +Q++TD  IK +D   + K+ E+M  
Sbjct: 130 IRRVAIDEVKKLEKDKEISEDERKVAEDKVQELTDKYIKEVDVVTKAKEDELMEI 184


>gi|15924249|ref|NP_371783.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926842|ref|NP_374375.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           N315]
 gi|21282871|ref|NP_645959.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus MW2]
 gi|49483422|ref|YP_040646.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486098|ref|YP_043319.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651829|ref|YP_186135.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus COL]
 gi|82750860|ref|YP_416601.1| ribosome recycling factor [Staphylococcus aureus RF122]
 gi|87160153|ref|YP_493849.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194969|ref|YP_499769.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148267749|ref|YP_001246692.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus JH9]
 gi|150393808|ref|YP_001316483.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus JH1]
 gi|151221381|ref|YP_001332203.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979580|ref|YP_001441839.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus Mu3]
 gi|221142493|ref|ZP_03566986.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315615|ref|ZP_04838828.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253731878|ref|ZP_04866043.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733503|ref|ZP_04867668.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006046|ref|ZP_05144647.2| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257425313|ref|ZP_05601738.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427974|ref|ZP_05604372.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430607|ref|ZP_05606989.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433367|ref|ZP_05609725.1| ribosome-recycling factor [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436209|ref|ZP_05612256.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M876]
 gi|257795685|ref|ZP_05644664.1| ribosome recycling factor [Staphylococcus aureus A9781]
 gi|258416088|ref|ZP_05682356.1| ribosome recycling factor [Staphylococcus aureus A9763]
 gi|258421671|ref|ZP_05684595.1| ribosome recycling factor [Staphylococcus aureus A9719]
 gi|258434827|ref|ZP_05688901.1| ribosome recycling factor [Staphylococcus aureus A9299]
 gi|258444597|ref|ZP_05692926.1| ribosome-recycling factor [Staphylococcus aureus A8115]
 gi|258447570|ref|ZP_05695714.1| ribosome recycling factor [Staphylococcus aureus A6300]
 gi|258449412|ref|ZP_05697515.1| ribosome-recycling factor [Staphylococcus aureus A6224]
 gi|258452558|ref|ZP_05700564.1| ribosome recycling factor [Staphylococcus aureus A5948]
 gi|258454791|ref|ZP_05702755.1| ribosome recycling factor [Staphylococcus aureus A5937]
 gi|262051321|ref|ZP_06023544.1| ribosome recycling factor [Staphylococcus aureus 930918-3]
 gi|269202876|ref|YP_003282145.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892747|ref|ZP_06300982.1| ribosome recycling factor [Staphylococcus aureus A8117]
 gi|282903814|ref|ZP_06311702.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C160]
 gi|282905577|ref|ZP_06313432.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908552|ref|ZP_06316382.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910831|ref|ZP_06318634.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914036|ref|ZP_06321823.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M899]
 gi|282916519|ref|ZP_06324277.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           D139]
 gi|282918958|ref|ZP_06326693.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C427]
 gi|282920503|ref|ZP_06328224.1| ribosome recycling factor [Staphylococcus aureus A9765]
 gi|282924081|ref|ZP_06331757.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C101]
 gi|282927601|ref|ZP_06335217.1| ribosome recycling factor [Staphylococcus aureus A10102]
 gi|283770323|ref|ZP_06343215.1| ribosome-recycling factor [Staphylococcus aureus subsp. aureus H19]
 gi|283958002|ref|ZP_06375453.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024252|ref|ZP_06378650.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus 132]
 gi|293501068|ref|ZP_06666919.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510030|ref|ZP_06668738.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526616|ref|ZP_06671301.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M1015]
 gi|294848255|ref|ZP_06789002.1| ribosome recycling factor [Staphylococcus aureus A9754]
 gi|295406196|ref|ZP_06816003.1| ribosome recycling factor [Staphylococcus aureus A8819]
 gi|295427746|ref|ZP_06820378.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296274817|ref|ZP_06857324.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus MR1]
 gi|297208095|ref|ZP_06924526.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297244424|ref|ZP_06928307.1| ribosome recycling factor [Staphylococcus aureus A8796]
 gi|297591296|ref|ZP_06949934.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus MN8]
 gi|300912176|ref|ZP_07129619.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304381177|ref|ZP_07363830.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|56749387|sp|Q6G9V4|RRF_STAAS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56749416|sp|Q6GHH6|RRF_STAAR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56753990|sp|P68785|RRF_STAAM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56753991|sp|P68786|RRF_STAAU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56753994|sp|P68787|RRF_STAAW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56753995|sp|P99130|RRF_STAAN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|62900781|sp|Q5HGH2|RRF_STAAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122539692|sp|Q2FZ21|RRF_STAA8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123486185|sp|Q2FHH9|RRF_STAA3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123549062|sp|Q2YXK9|RRF_STAAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231513|sp|A7X1N7|RRF_STAA1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|172049020|sp|A6QGF9|RRF_STAAE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044079|sp|A6U178|RRF_STAA2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044080|sp|A5ISE3|RRF_STAA9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|2645713|gb|AAB87473.1| ribosome recycling factor [Staphylococcus aureus]
 gi|13701059|dbj|BAB42354.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247029|dbj|BAB57421.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21204310|dbj|BAB95007.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus MW2]
 gi|49241551|emb|CAG40237.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244541|emb|CAG42970.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286015|gb|AAW38109.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus COL]
 gi|82656391|emb|CAI80810.1| ribosome recycling factor [Staphylococcus aureus RF122]
 gi|87126127|gb|ABD20641.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202527|gb|ABD30337.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147740818|gb|ABQ49116.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus JH9]
 gi|149946260|gb|ABR52196.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus JH1]
 gi|150374181|dbj|BAF67441.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156721715|dbj|BAF78132.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus Mu3]
 gi|253724288|gb|EES93017.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728557|gb|EES97286.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257271770|gb|EEV03908.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274815|gb|EEV06302.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278735|gb|EEV09354.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281460|gb|EEV11597.1| ribosome-recycling factor [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284491|gb|EEV14611.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M876]
 gi|257789657|gb|EEV27997.1| ribosome recycling factor [Staphylococcus aureus A9781]
 gi|257839236|gb|EEV63712.1| ribosome recycling factor [Staphylococcus aureus A9763]
 gi|257842357|gb|EEV66782.1| ribosome recycling factor [Staphylococcus aureus A9719]
 gi|257849188|gb|EEV73170.1| ribosome recycling factor [Staphylococcus aureus A9299]
 gi|257850090|gb|EEV74043.1| ribosome-recycling factor [Staphylococcus aureus A8115]
 gi|257853761|gb|EEV76720.1| ribosome recycling factor [Staphylococcus aureus A6300]
 gi|257857400|gb|EEV80298.1| ribosome-recycling factor [Staphylococcus aureus A6224]
 gi|257859776|gb|EEV82618.1| ribosome recycling factor [Staphylococcus aureus A5948]
 gi|257863174|gb|EEV85938.1| ribosome recycling factor [Staphylococcus aureus A5937]
 gi|259160696|gb|EEW45717.1| ribosome recycling factor [Staphylococcus aureus 930918-3]
 gi|262075166|gb|ACY11139.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269940750|emb|CBI49132.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282314053|gb|EFB44445.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316768|gb|EFB47142.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C427]
 gi|282319006|gb|EFB49358.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           D139]
 gi|282322104|gb|EFB52428.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M899]
 gi|282325436|gb|EFB55745.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327614|gb|EFB57897.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330869|gb|EFB60383.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282590604|gb|EFB95681.1| ribosome recycling factor [Staphylococcus aureus A10102]
 gi|282594165|gb|EFB99152.1| ribosome recycling factor [Staphylococcus aureus A9765]
 gi|282595432|gb|EFC00396.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C160]
 gi|282764744|gb|EFC04869.1| ribosome recycling factor [Staphylococcus aureus A8117]
 gi|283460470|gb|EFC07560.1| ribosome-recycling factor [Staphylococcus aureus subsp. aureus H19]
 gi|283470474|emb|CAQ49685.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           ST398]
 gi|283790151|gb|EFC28968.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285816941|gb|ADC37428.1| Ribosome recycling factor [Staphylococcus aureus 04-02981]
 gi|290920688|gb|EFD97751.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291096073|gb|EFE26334.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466974|gb|EFF09492.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M809]
 gi|294825055|gb|EFG41477.1| ribosome recycling factor [Staphylococcus aureus A9754]
 gi|294968784|gb|EFG44806.1| ribosome recycling factor [Staphylococcus aureus A8819]
 gi|295128104|gb|EFG57738.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296887338|gb|EFH26240.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178454|gb|EFH37700.1| ribosome recycling factor [Staphylococcus aureus A8796]
 gi|297576182|gb|EFH94898.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus MN8]
 gi|298694551|gb|ADI97773.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300886422|gb|EFK81624.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302332865|gb|ADL23058.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751082|gb|ADL65259.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340160|gb|EFM06101.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312438362|gb|ADQ77433.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315131053|gb|EFT87037.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315194147|gb|EFU24540.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|315198501|gb|EFU28830.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140924|gb|EFW32771.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144360|gb|EFW36126.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323441038|gb|EGA98745.1| ribosome recycling factor [Staphylococcus aureus O11]
 gi|323443907|gb|EGB01518.1| ribosome recycling factor [Staphylococcus aureus O46]
 gi|329313929|gb|AEB88342.1| Ribosome-recycling factor [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727824|gb|EGG64275.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           21189]
 gi|329733642|gb|EGG69970.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           21193]
          Length = 184

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 114/176 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+LV+S 
Sbjct: 9   KSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLLVISP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR   VK      E++K+SVR
Sbjct: 69  YDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD  D LKK  K+G  +ED + S   D+QK TD++IK ID    +K+K+IM  
Sbjct: 129 NIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKDIMSV 184


>gi|302342180|ref|YP_003806709.1| ribosome recycling factor [Desulfarculus baarsii DSM 2075]
 gi|301638793|gb|ADK84115.1| ribosome recycling factor [Desulfarculus baarsii DSM 2075]
          Length = 185

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 111/176 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+RM   I  LK+D   +RTGR +P++LD V+ + YG   PLNQ+A ++V E R++V+  
Sbjct: 10  KERMHKAIEALKRDFSRVRTGRATPTILDGVRADYYGQPTPLNQMAGISVPEARLIVIQP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD +    +E+ I  S+LGL P  +G+V+RI  P  T+ERR  L K+    AE++K++VR
Sbjct: 70  WDPKSCELIEKAILASDLGLTPQSDGKVVRINFPPLTQERRKDLAKLVRKMAEEAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
             RRD  + LK+ +K G+ SED     + +IQK TD  IK +D    EK+KEIM F
Sbjct: 130 AARRDANEMLKEFKKEGEISEDDAFRGQEEIQKTTDDFIKKVDETLAEKEKEIMEF 185


>gi|262283030|ref|ZP_06060797.1| ribosome-recycling factor [Streptococcus sp. 2_1_36FAA]
 gi|262261282|gb|EEY79981.1| ribosome-recycling factor [Streptococcus sp. 2_1_36FAA]
          Length = 185

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 114/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMSHSHQSLAREFGAVRAGRANASLLDRISVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERAINASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKIGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++
Sbjct: 126 IAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTAHKEKELL 183


>gi|146308071|ref|YP_001188536.1| ribosome recycling factor [Pseudomonas mendocina ymp]
 gi|166231209|sp|A4XWT8|RRF_PSEMY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145576272|gb|ABP85804.1| ribosome recycling factor [Pseudomonas mendocina ymp]
          Length = 185

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 115/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG ++  L +++ ++RTGR  PS+LD VKV A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMGKSLEALDRNLASIRTGRAHPSILDSVKVPAWGSDMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A   AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAIMTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQARGVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD +  LKK  K+ + SED      +++QKITD  I ++D   E K+ ++M
Sbjct: 127 AVRNVRRDALAELKKLAKAKEISEDEERRAADELQKITDKFIADVDKALEVKEADLM 183


>gi|283783956|ref|YP_003363821.1| ribosome recycling factor [Citrobacter rodentium ICC168]
 gi|282947410|emb|CBG86955.1| ribosome recycling factor [Citrobacter rodentium ICC168]
          Length = 185

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLPQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+
Sbjct: 72  RSLSAAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++DIQK+TD+ IK +++   +K+ E+M F
Sbjct: 132 RRDANDKVKALLKEKEISEDDDRRSQDDIQKLTDAAIKKVEAALADKEAELMQF 185


>gi|94263226|ref|ZP_01287043.1| Ribosome recycling factor [delta proteobacterium MLMS-1]
 gi|93456444|gb|EAT06564.1| Ribosome recycling factor [delta proteobacterium MLMS-1]
          Length = 184

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 123/185 (66%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++VI    + ++M  ++   ++++  +RTGR S ++LD +KVEAYGS +PLNQVA +T+
Sbjct: 1   MDEVI--LEMSEKMEQSLEAYRRELSRIRTGRASLNILDGIKVEAYGSQLPLNQVATLTI 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+V+  WD +   ++E+ I  S++GL P  +G+V+R+ +P+ TEERR  LVK    
Sbjct: 59  PESRMIVIQPWDAQQGKAIEKAIQASDIGLTPSSDGKVIRLTIPQLTEERRKDLVKQLKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E+ +++VRN+RR+ +D LKK +   +  ED    L+++ QK TD+ I  ID+   +K+
Sbjct: 119 LSEEYRVAVRNVRREAIDRLKKLKNDKQLPEDDFFRLQDEAQKETDAAIAKIDTIMADKE 178

Query: 181 KEIMH 185
           KE+M 
Sbjct: 179 KELME 183


>gi|238924132|ref|YP_002937648.1| ribosome recycling factor [Eubacterium rectale ATCC 33656]
 gi|259494542|sp|C4ZA73|RRF_EUBR3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238875807|gb|ACR75514.1| ribosome recycling factor [Eubacterium rectale ATCC 33656]
 gi|291524866|emb|CBK90453.1| ribosome recycling factor [Eubacterium rectale DSM 17629]
 gi|291529007|emb|CBK94593.1| ribosome recycling factor [Eubacterium rectale M104/1]
          Length = 184

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 117/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M  T++ L+++   +R GR +P +LD ++V+ YG+  P+  VANV+V EPRM+
Sbjct: 5   LNPFQDKMEKTLNNLEEEYAGIRAGRANPHILDKLRVDYYGTPSPIQSVANVSVPEPRMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  MV  +E+ I+ S++G+NP  +G+++R+  PE TEERR  L K      E++K
Sbjct: 65  QIQPWEASMVKEIEKAINCSDIGINPTNDGKLIRLVFPELTEERRKDLAKDIKKKGEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD +D +KK+ K    SED +  LE+D QK+TD  +  +D+  + K KEI+
Sbjct: 125 VAVRNIRRDAIDSIKKTGKEEGISEDEIKGLEDDAQKLTDKFVAKVDAAVDAKCKEIL 182


>gi|148826547|ref|YP_001291300.1| ribosome recycling factor [Haemophilus influenzae PittEE]
 gi|148716707|gb|ABQ98917.1| ribosome recycling factor [Haemophilus influenzae PittEE]
          Length = 173

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 110/173 (63%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++  LK  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L V+V+D+
Sbjct: 1   MEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLAVTVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ K+++RN+R
Sbjct: 61  SLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRNLIKIVKGEGEQGKVAIRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SE+     E +IQKITD  IK +D    +K+KE+M F
Sbjct: 121 RDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEVLADKEKELMDF 173


>gi|156935313|ref|YP_001439229.1| hypothetical protein ESA_03170 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533567|gb|ABU78393.1| hypothetical protein ESA_03170 [Cronobacter sakazakii ATCC BAA-894]
          Length = 173

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 111/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+ANVTV + R L ++V+D+
Sbjct: 1   MDKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLANVTVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE++++++RN+R
Sbjct: 61  SMGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLIKVVRGEAEQARVAIRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  +  ED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 121 RDANDKVKALLKDKEIGEDEDRRSQDDVQKLTDAAIKKVDAALADKEAELMQF 173


>gi|291286434|ref|YP_003503250.1| ribosome recycling factor [Denitrovibrio acetiphilus DSM 12809]
 gi|290883594|gb|ADD67294.1| ribosome recycling factor [Denitrovibrio acetiphilus DSM 12809]
          Length = 185

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 71/170 (41%), Positives = 109/170 (64%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
           TIS  K ++ T+RTGR S +M D V V+ YG+  PL+ VA++   EPR++ +  WD  ++
Sbjct: 16  TISHFKDELKTIRTGRASVAMFDGVTVDYYGTPTPLSGVASLNAPEPRLITIQPWDMSII 75

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
            ++E+ I  SN+G NP  +G+++RIPVP+ TEERR  +VK+    AE +K+++RN+RR+G
Sbjct: 76  GAIEKAIQNSNMGFNPSNDGKIIRIPVPQLTEERRKEIVKLVKKMAEDNKVAIRNLRREG 135

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            D +KK  K  + SED       DIQ +T+  IK +D     K+KE+M  
Sbjct: 136 NDKIKKLEKDKEISEDDSKKFVADIQDVTNDFIKKVDEVTAAKEKEVMEI 185


>gi|288905833|ref|YP_003431055.1| ribosome recycling factor [Streptococcus gallolyticus UCN34]
 gi|306831922|ref|ZP_07465077.1| ribosome recycling factor [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|306834034|ref|ZP_07467155.1| ribosome recycling factor [Streptococcus bovis ATCC 700338]
 gi|325978868|ref|YP_004288584.1| ribosome-recycling factor [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732559|emb|CBI14131.1| ribosome recycling factor [Streptococcus gallolyticus UCN34]
 gi|304423822|gb|EFM26967.1| ribosome recycling factor [Streptococcus bovis ATCC 700338]
 gi|304425848|gb|EFM28965.1| ribosome recycling factor [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178796|emb|CBZ48840.1| Ribosome-recycling factor [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 185

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 115/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   + S L ++   +R GR + S+LD ++VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFEQSHSSLAREFAAIRAGRANASLLDRIQVEYYGAMTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +E  I+ S+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSLKDIEHAINASDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD MD  KK  K+ + +ED +  LE DIQK TD  +K+ID+    K+KE++ 
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKVLEKDIQKATDEAVKHIDAMTANKEKELLE 184


>gi|116492646|ref|YP_804381.1| ribosome recycling factor [Pediococcus pentosaceus ATCC 25745]
 gi|122265890|sp|Q03FT3|RRF_PEDPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116102796|gb|ABJ67939.1| ribosome recycling factor [Pediococcus pentosaceus ATCC 25745]
          Length = 186

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M    + L++D+ ++R GR + S+LD V V+ YG+  PLNQ+A++T+ EPR+L
Sbjct: 7   IQKAEEKMQKAQNVLERDLGSIRAGRANASLLDKVSVDYYGAPTPLNQMASITIPEPRVL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK ++  +E+ I  S+LG+NP  +G  +R+ VP+ TEE R  L K   A  EK+K
Sbjct: 67  LVTPYDKSVLNDIEQAILMSDLGINPANDGSAIRLVVPQLTEETRKDLAKNVKAEGEKAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD LKK+ K+G  ++D    LE   Q  TD  IK +D     K+KE++ 
Sbjct: 127 VAVRNIRRDAMDTLKKANKNGDYNDDEFHDLEKQTQDSTDKAIKVVDEIVANKEKEVLE 185


>gi|254785177|ref|YP_003072605.1| ribosome recycling factor [Teredinibacter turnerae T7901]
 gi|259494556|sp|C5BQF9|RRF_TERTT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|237684972|gb|ACR12236.1| ribosome recycling factor [Teredinibacter turnerae T7901]
          Length = 185

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T+  L  +   +RTGR  PS+LD V V  YGS  PL+QVAN++VL+ R L +S W+
Sbjct: 12  RMKKTVEALGINFNKIRTGRAHPSILDGVSVSYYGSDTPLSQVANISVLDARTLSLSPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K MV  +E+ I +S+LGLNP+  G+++R+P+P  TEE R   +K A   AE++++S+RN+
Sbjct: 72  KSMVPEIEKAIMKSDLGLNPVTTGELIRVPMPALTEESRKGYIKQAKTEAEQARVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD +  +K+  K  + SED     ++DIQKITD  +  +D+    K+K++M  
Sbjct: 132 RRDVLADVKELLKEKEISEDDDRRAQDDIQKITDKYVAEVDAALAVKEKDLMEI 185


>gi|94967292|ref|YP_589340.1| ribosome recycling factor [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549342|gb|ABF39266.1| ribosome recycling factor [Candidatus Koribacter versatilis
           Ellin345]
          Length = 195

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 114/176 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
            +K RM   +   +K++   RTGR S  MLD V+ E YGS +PLNQVA +TV EP++++V
Sbjct: 18  QLKTRMEKAVDDFRKELSATRTGRASVHMLDTVQAEYYGSMMPLNQVATITVPEPQLILV 77

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + +D   + ++E+ I   +LG+NP+ +G+++RIPVP  TE+RR  +VK  H   E+ + +
Sbjct: 78  TPFDPSALGAIEKAIRSGDLGMNPMNDGKIIRIPVPPLTEDRRKEMVKHLHKALEEHRTA 137

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +RNIRRDG D +KK+ K  K +ED        +QK+TD  IK ++   + K+KE+M
Sbjct: 138 IRNIRRDGNDFIKKTLKDKKITEDEERGTMEHLQKLTDDEIKKMEEMCKTKEKEVM 193


>gi|46579283|ref|YP_010091.1| ribosome recycling factor [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|60390259|sp|Q72DQ9|RRF_DESVH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|46448697|gb|AAS95350.1| ribosome recycling factor [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233111|gb|ADP85965.1| ribosome recycling factor [Desulfovibrio vulgaris RCH1]
          Length = 186

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   I+ L+++   LRTGR S S++D +KV+ YG+  P++QVA+V V + R +
Sbjct: 7   LLDAEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDSRCI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+   + +E+ I +S+LGLNP+ +G+++RI +P  TEERR  L K+A  YAE++K
Sbjct: 67  TIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  + LKK  K+ + SED +   + D+QK+TD  +   D     K+KEIM  
Sbjct: 127 VAVRNVRRDANEQLKKLEKNKELSEDDLRKAQEDVQKLTDRFVAKTDEKAGAKEKEIMDI 186


>gi|157150295|ref|YP_001450730.1| ribosome recycling factor [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189044081|sp|A8AY70|RRF_STRGC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157075089|gb|ABV09772.1| ribosome recycling factor [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 185

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 114/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMSHSHQNLAREFGAVRAGRANASLLDRISVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERAINASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKIGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++
Sbjct: 126 IAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTAHKEKELL 183


>gi|120603155|ref|YP_967555.1| ribosome recycling factor [Desulfovibrio vulgaris DP4]
 gi|166230784|sp|A1VFB2|RRF_DESVV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120563384|gb|ABM29128.1| ribosome recycling factor [Desulfovibrio vulgaris DP4]
          Length = 186

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   I+ L+++   LRTGR S S++D +KV+ YG+  P++QVA+V V + R +
Sbjct: 7   LLDAEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAVPDSRCI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+   + +E+ I +S+LGLNP+ +G+++RI +P  TEERR  L K+A  YAE++K
Sbjct: 67  TIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARKYAEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  + LKK  K+ + SED +   + D+QK+TD  +   D     K+KEIM  
Sbjct: 127 VAVRNVRRDANEQLKKLEKNKELSEDDLRKAQEDVQKLTDRFVAKTDEKAGAKEKEIMDI 186


>gi|329727208|gb|EGG63664.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           21172]
          Length = 184

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 114/176 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+LV+S 
Sbjct: 9   KSRMQKSIESLSRELANVSAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLLVISP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR   VK      E++K+SVR
Sbjct: 69  YDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD  D LKK  K+G  +ED + S   D+QK TD++IK ID    +K+K+IM  
Sbjct: 129 NIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKDIMSV 184


>gi|332653365|ref|ZP_08419110.1| ribosome recycling factor [Ruminococcaceae bacterium D16]
 gi|332518511|gb|EGJ48114.1| ribosome recycling factor [Ruminococcaceae bacterium D16]
          Length = 184

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 112/172 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  TI  +K +  ++R GR +  +LD + VE YG+  PLNQVA ++  +PR L V  WD
Sbjct: 11  KMIKTIEVVKANFASVRAGRANAGVLDRIMVEYYGTPTPLNQVAAISSPDPRTLTVQPWD 70

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             ++ ++E+ I  S+LG+NP  +G+++R+  P+ TEERR  L K    Y+E+ K+++RNI
Sbjct: 71  ASLLKAIEKAIQTSDLGINPQNDGRLIRLAFPQLTEERRKELTKQVRKYSEEGKVALRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD MD  KK +K+ + +ED +  LE ++Q +TD   K+ID    +K++E+M
Sbjct: 131 RRDAMDEFKKKKKASEITEDDLKELEKELQDLTDKRCKDIDELTVKKEQELM 182


>gi|319892274|ref|YP_004149149.1| Ribosome recycling factor [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161970|gb|ADV05513.1| Ribosome recycling factor [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464629|gb|ADX76782.1| ribosome recycling factor [Staphylococcus pseudintermedius ED99]
          Length = 184

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q+ K RM  +   L +++  +  GR + ++L  V+V+ YG+  P+ Q+A++ V E R+L
Sbjct: 5   IQDAKTRMKKSTENLSRELAQINAGRANSNLLAGVQVDYYGAPTPVQQLASINVPEARLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VVS +DK  +A +E+ I  +NLG+NP  +G V+RI VP  TEERR  +VK      E +K
Sbjct: 65  VVSPYDKTSLADIEKAIIAANLGVNPTSDGDVIRIMVPALTEERRKEIVKEVKKTGENAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D LK+  K G  SED + +  +++QKITDS+IK ID    +K+K+IM  
Sbjct: 125 VSIRNIRRDANDTLKRQEKDGDISEDELRNGSDEVQKITDSSIKEIDQLVADKEKDIMSV 184


>gi|300691601|ref|YP_003752596.1| ribosome recycling factor (ribosome-releasing factor) [Ralstonia
           solanacearum PSI07]
 gi|299078661|emb|CBJ51319.1| Ribosome recycling factor (Ribosome-releasing factor) [Ralstonia
           solanacearum PSI07]
          Length = 186

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+ + + R + V  W+
Sbjct: 13  KMQKSIDAFKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVANLGLADARTISVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV++VE+ I E++LGLNP   G+V+R+P+P  TEERR  L KV  +  E +K++VRN+
Sbjct: 73  KKMVSAVEKAIREADLGLNPATMGEVIRVPMPPLTEERRKELTKVVKSEGEDAKVAVRNV 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  +  KK  K    SED     ++++QK+TD  +  +D    EK KEIM
Sbjct: 133 RRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDRFVSEVDKLVAEKDKEIM 184


>gi|225388995|ref|ZP_03758719.1| hypothetical protein CLOSTASPAR_02740 [Clostridium asparagiforme
           DSM 15981]
 gi|225044935|gb|EEG55181.1| hypothetical protein CLOSTASPAR_02740 [Clostridium asparagiforme
           DSM 15981]
          Length = 183

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 111/179 (62%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+  +D+M  T+  L+ +   +R GR +P +LD +KV+ YG+  PL QV N++V E RM
Sbjct: 3   ELKKYEDKMNKTLDVLEDEFGAIRAGRANPHVLDKIKVDYYGTPTPLQQVGNISVPEARM 62

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+  W+K ++  +E+ I  S LG+NP  +G  +R+  PE TE+RR  L K      +++
Sbjct: 63  IVIQPWEKSLIKPIEKAILTSELGINPNNDGNAIRLIFPELTEDRRKELAKDVKKKGDQA 122

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           K+++RNIRRD MD  KK  KSG  SED     E  +QK+TD  I+ +D   E K KEIM
Sbjct: 123 KVAIRNIRRDAMDAFKKMEKSGDMSEDDRDLAEEKMQKLTDKMIEKVDKAVETKTKEIM 181


>gi|311280859|ref|YP_003943090.1| ribosome recycling factor [Enterobacter cloacae SCF1]
 gi|308750054|gb|ADO49806.1| ribosome recycling factor [Enterobacter cloacae SCF1]
          Length = 185

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+
Sbjct: 72  RSMSPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 132 RRDANDKVKALLKEKEISEDDDRRSQDDVQKMTDAAIKKVDAALADKEAELMQF 185


>gi|28378683|ref|NP_785575.1| ribosome recycling factor [Lactobacillus plantarum WCFS1]
 gi|254556881|ref|YP_003063298.1| ribosome recycling factor [Lactobacillus plantarum JDM1]
 gi|300768196|ref|ZP_07078101.1| ribosome recycling factor [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180824|ref|YP_003924952.1| ribosome recycling factor [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|34924944|sp|Q88VJ7|RRF_LACPL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|28271519|emb|CAD64424.1| ribosome recycling factor [Lactobacillus plantarum WCFS1]
 gi|254045808|gb|ACT62601.1| ribosome recycling factor [Lactobacillus plantarum JDM1]
 gi|300494260|gb|EFK29423.1| ribosome recycling factor [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046315|gb|ADN98858.1| ribosome recycling factor [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 187

 Score =  151 bits (381), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++RM    + L++++  +R GR + S+L+ +  + YG+  PLNQ+A +TV EPR+L
Sbjct: 8   LKEAQERMKKAEAALQRELGNIRAGRANASLLNRISADYYGAQTPLNQMAAITVPEPRVL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +E+ I  S+LG++P  +G  +R+ +P+ TEERR  L K   A  E++K
Sbjct: 68  MVTPFDKSALKEIEKAILASDLGISPANDGSAIRLVIPQLTEERRKELAKDVKAEGERAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD M+ LKK  K G+ ++D +  LE+  QK+TD   K++D+   +K+KEI+ 
Sbjct: 128 VAVRNVRRDAMEALKKGHKDGQFTDDQLHQLEDQAQKLTDQAGKDVDAIVADKEKEILE 186


>gi|325661706|ref|ZP_08150329.1| ribosome-recycling factor [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471959|gb|EGC75174.1| ribosome-recycling factor [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 183

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 117/184 (63%), Gaps = 3/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+ +++ N  ++M  + + L  ++ T+R GR +P +LD + V+ YGS  P+ QVANV+V
Sbjct: 1   MNERLNVFN--EKMEKSYNSLTSELATIRAGRANPHVLDKLTVDYYGSPTPIQQVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+K MV  +E+ I  S++G+NP  +G V+R+  PE TEERR  LVK    
Sbjct: 59  PEARMIQIQPWEKSMVREIEKAILTSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  K++VRNIRRDG D  KK  K  + SED +  LE+++QK+TD  I  ID   E K 
Sbjct: 119 KGEAGKVAVRNIRRDGNDTFKK-LKGTEVSEDEIKDLEDELQKLTDKYIAQIDKAVEAKS 177

Query: 181 KEIM 184
           KE+M
Sbjct: 178 KEVM 181


>gi|229824123|ref|ZP_04450192.1| hypothetical protein GCWU000282_01427 [Catonella morbi ATCC 51271]
 gi|229786477|gb|EEP22591.1| hypothetical protein GCWU000282_01427 [Catonella morbi ATCC 51271]
          Length = 191

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K RM  T+   ++++ ++R GR + S+LD + VE YG   PLNQ+A++T+ E RML
Sbjct: 12  IKDTKQRMQKTVDAYQRELGSIRAGRANASILDRISVEYYGVPTPLNQLASITIPEARML 71

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+ I  S++G+ P  +G V+R+ +P  T+ERR  L K      E +K
Sbjct: 72  LITPYDKGTLGDIEKAILMSDVGITPSNDGSVVRLVIPALTQERRQELAKTVGKEQEGAK 131

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           + VRNIRRD +DH KK+ K+ + +ED +  LE DIQK+TD  +K I+    EK+KEI+ 
Sbjct: 132 VRVRNIRRDAIDHAKKAEKNKEITEDDLKGLEKDIQKLTDDFVKEIEKLTAEKEKEILE 190


>gi|261419452|ref|YP_003253134.1| ribosome recycling factor [Geobacillus sp. Y412MC61]
 gi|261375909|gb|ACX78652.1| ribosome recycling factor [Geobacillus sp. Y412MC61]
          Length = 186

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  K++M   +    +++ ++R GR +  +L+ V V+ YG   P+NQ+A+++V E R+L
Sbjct: 7   IQQAKEKMDKAVQAFTRELASIRAGRANAGLLEKVTVDYYGVPTPINQLASISVPEARLL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I  S+LGL P  +G V+R+ +P  TEERR  L K+   Y+E +K
Sbjct: 67  VIQPYDKSAIKEMEKAILASDLGLTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD  D LKK  K+G+ +ED + S  +++QK+TD  I  ID+  +EK+KE+M 
Sbjct: 127 VAVRNIRRDANDELKKLEKNGEITEDELRSYTDEVQKLTDDHIAKIDAITKEKEKEVME 185


>gi|56419787|ref|YP_147105.1| ribosome recycling factor [Geobacillus kaustophilus HTA426]
 gi|297530573|ref|YP_003671848.1| ribosome recycling factor [Geobacillus sp. C56-T3]
 gi|319766267|ref|YP_004131768.1| ribosome recycling factor [Geobacillus sp. Y412MC52]
 gi|60390228|sp|Q5L0J9|RRF_GEOKA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56379629|dbj|BAD75537.1| ribosome recycling factor [Geobacillus kaustophilus HTA426]
 gi|297253825|gb|ADI27271.1| ribosome recycling factor [Geobacillus sp. C56-T3]
 gi|317111133|gb|ADU93625.1| ribosome recycling factor [Geobacillus sp. Y412MC52]
          Length = 185

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  K++M   +    +++ ++R GR +  +L+ V V+ YG   P+NQ+A+++V E R+L
Sbjct: 6   IQQAKEKMDKAVQAFTRELASIRAGRANAGLLEKVTVDYYGVPTPINQLASISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I  S+LGL P  +G V+R+ +P  TEERR  L K+   Y+E +K
Sbjct: 66  VIQPYDKSAIKEMEKAILASDLGLTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD  D LKK  K+G+ +ED + S  +++QK+TD  I  ID+  +EK+KE+M 
Sbjct: 126 VAVRNIRRDANDELKKLEKNGEITEDELRSYTDEVQKLTDDHIAKIDAITKEKEKEVME 184


>gi|17546126|ref|NP_519528.1| ribosome recycling factor [Ralstonia solanacearum GMI1000]
 gi|22001940|sp|Q8XZI8|RRF_RALSO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|17428422|emb|CAD15109.1| probable ribosome recycling factor (ribosome-releasing factor)
           (rrf) protein [Ralstonia solanacearum GMI1000]
          Length = 186

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+ + + R + V  W+
Sbjct: 13  KMQKSIDAFKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVANLGLADARTISVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV++VER I +++LGLNP   G+V+R+P+P  TEERR  L KV  +  E +K++VRN+
Sbjct: 73  KKMVSAVERAIRDADLGLNPATMGEVIRVPMPPLTEERRKELTKVVKSEGEDAKVAVRNV 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  +  KK  K    SED     ++++QK+TD  +  +D    EK KEIM
Sbjct: 133 RRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDRFVAEVDKLVAEKDKEIM 184


>gi|289434595|ref|YP_003464467.1| hypothetical protein lse_1230 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170839|emb|CBH27381.1| frr [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313638109|gb|EFS03374.1| ribosome recycling factor [Listeria seeligeri FSL S4-171]
          Length = 185

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A++++ E RML
Sbjct: 6   LTKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISIPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNID+  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEDLKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDNITKDKEAEILEV 185


>gi|313633414|gb|EFS00248.1| ribosome recycling factor [Listeria seeligeri FSL N1-067]
          Length = 176

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 120/176 (68%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A++++ E RML+++ 
Sbjct: 1   KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISIPEARMLLITP 60

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K++VR
Sbjct: 61  YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVR 120

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNID+  ++K+ EI+  
Sbjct: 121 NIRREANEDLKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDNITKDKEAEILEV 176


>gi|194289789|ref|YP_002005696.1| ribosome recycling factor [Cupriavidus taiwanensis LMG 19424]
 gi|238692748|sp|B3R2B4|RRF_CUPTR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|193223624|emb|CAQ69631.1| ribosome releasing factor [Cupriavidus taiwanensis LMG 19424]
          Length = 186

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVA + + + R + 
Sbjct: 8   KSAEQKMQKSIEAFKADLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVAAIGLADARTIT 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV++VE+ I + +LGLNP   G+V+R+P+P  TEERR  L KV    AE +K+
Sbjct: 68  VQPWEKKMVSAVEKAIRDCDLGLNPATMGEVIRVPMPALTEERRKELTKVVKGEAEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  +  KK  K    SED     ++++QK+TD  +  ID    EK+KEIM
Sbjct: 128 AVRNLRRDANEQFKKLVKDKTISEDEERRGQDEVQKLTDKYVAEIDRMVAEKEKEIM 184


>gi|325478712|gb|EGC81823.1| ribosome recycling factor [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 186

 Score =  150 bits (380), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 110/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +D M   +   +  + T++ GR + ++LD +    YG+  P+NQ A V+V E R+L++  
Sbjct: 11  QDEMAKAVDSFENRIATIKAGRATEAVLDGITFSYYGTETPINQAATVSVPEARLLMIKP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK  +  +E+ I +SN+G+ P  +G+V+R+P P+ TEERR    K    YAE +KI +R
Sbjct: 71  WDKSNIGPIEKAILKSNIGITPQNDGEVIRLPFPQLTEERRKEYTKQVDTYAEDAKIVIR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N RR+ MD +KKS KSG  +ED   +LE++IQKI D  I+ +++   +K KE+M
Sbjct: 131 NKRREAMDEVKKSEKSGDVTEDDRYTLEDEIQKIADKNIEEVEALANKKNKELM 184


>gi|71907375|ref|YP_284962.1| ribosome recycling factor [Dechloromonas aromatica RCB]
 gi|71846996|gb|AAZ46492.1| ribosome recycling factor [Dechloromonas aromatica RCB]
          Length = 198

 Score =  150 bits (380), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  L+ D+  +RTGR    +LD V+V+ YGS VP+NQVANVT+++ R + V  W+
Sbjct: 25  KMQKSLEALRLDLQKVRTGRAHTGLLDHVQVDYYGSMVPVNQVANVTLVDARTIGVQPWE 84

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+  VE+ I + +LGLNP  +G ++R+P+P  TEERR  ++K+     E  K+++RN+
Sbjct: 85  KGMLQKVEKAIRDCDLGLNPASQGDLIRVPMPALTEERRKEMIKIVRTEGEGVKVAIRNL 144

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD + HLK + K G+  ED     ++D+QK+TD  I  +D     K+ E+M  
Sbjct: 145 RRDAITHLKDALKKGEIPEDDERKAQDDVQKLTDRYIVEVDKMLATKEAELMQV 198


>gi|257055044|ref|YP_003132876.1| ribosome recycling factor [Saccharomonospora viridis DSM 43017]
 gi|256584916|gb|ACU96049.1| ribosome recycling factor [Saccharomonospora viridis DSM 43017]
          Length = 185

 Score =  150 bits (380), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +SF K+++ ++RTGR +P+M   + VE YG+  PLNQ+A+V + E RM 
Sbjct: 6   LFDAEEKMEKAVSFAKEELASVRTGRATPAMFSRIVVEYYGAPTPLNQLASVNIPEARMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +A++E+ I ES+LG+NP  +G ++R+ +P+ TEERR  +VK+A    E+++
Sbjct: 66  IIKPYDGSQLANIEKAIRESDLGVNPTNDGSIIRVVIPQLTEERRKEMVKIAKGKGEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+R IRR   + L +  K G+A ED VA  E ++Q +TD  +  +D   + K+ E++ 
Sbjct: 126 ISIRGIRRKAKEELDRIAKDGEAGEDEVARAEKELQNLTDRYVHQVDELVKNKEAELLE 184


>gi|157364644|ref|YP_001471411.1| ribosome recycling factor [Thermotoga lettingae TMO]
 gi|166991560|sp|A8F863|RRF_THELT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157315248|gb|ABV34347.1| ribosome recycling factor [Thermotoga lettingae TMO]
          Length = 185

 Score =  150 bits (380), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++N +DRM   +  + +++  +RTGR SP++L+ +KV+ YG+  P++Q+A V + E R L
Sbjct: 6   VKNAEDRMNKAVEKISEELRKMRTGRPSPAILEEIKVDYYGAQTPISQLATVNITEDRAL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD+ +++S+E+ I  S+LGL P  +G V+R+  P  T E+R    K A   AE+ K
Sbjct: 66  IIKPWDRSVLSSIEKAIFASDLGLTPQNDGNVIRLTFPTPTTEQRQKWAKKAKEIAEQGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RNIRRD +  LK   K GK SED    +E +IQ +TD  I  ID   E+K+KEIM 
Sbjct: 126 IAIRNIRRDILKELKGDTKDGKISEDDEKRIEKEIQDLTDKKILEIDKLLEKKEKEIME 184


>gi|148982441|ref|ZP_01816756.1| ribosome recycling factor [Vibrionales bacterium SWAT-3]
 gi|145960478|gb|EDK25851.1| ribosome recycling factor [Vibrionales bacterium SWAT-3]
          Length = 185

 Score =  150 bits (380), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  L+  +  +RTGR  PS+L  + VE YG+  PL QVANV   + R L 
Sbjct: 7   KDAQERMEKSVDALRNSLQKIRTGRAHPSLLSGLTVEYYGAPTPLTQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK +   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKTLTPLVEKAIMTSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +KN+D     K+KE+M  
Sbjct: 127 AIRNIRRDANGDLKALLKDKEISEDEDRKAQDEIQKLTDAAVKNVDEVLATKEKELMEV 185


>gi|152980540|ref|YP_001353745.1| ribosome recycling factor [Janthinobacterium sp. Marseille]
 gi|166230794|sp|A6SZP8|RRF_JANMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151280617|gb|ABR89027.1| ribosome recycling factor [Janthinobacterium sp. Marseille]
          Length = 186

 Score =  150 bits (380), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 81/182 (44%), Positives = 118/182 (64%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           V D +   D +M  +I  LK D+  +RTGR    +LD V VE YG+   L+QVANVT+++
Sbjct: 3   VADAKKTADQKMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLSQVANVTLID 62

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R + V  ++K+MVA VE+ I E++LGLNP  +G+++R+P P  TEERR  +VK+  + A
Sbjct: 63  ARTIGVQPFEKKMVAVVEKAIREADLGLNPATQGELIRVPTPPLTEERRKEMVKLVKSEA 122

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E +KI+VRNIRRD  + LKK  K    SED     +++IQK+TD  +  ID    EK+KE
Sbjct: 123 EDAKIAVRNIRRDANESLKKLVKEKACSEDEERRAQDEIQKLTDKFVIEIDKLVVEKEKE 182

Query: 183 IM 184
           ++
Sbjct: 183 VL 184


>gi|116792122|gb|ABK26242.1| unknown [Picea sitchensis]
          Length = 173

 Score =  150 bits (380), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 77/171 (45%), Positives = 112/171 (65%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+  +K +  ++RTGR SP+ LD V+VE YGS V L  +A V+V +   L+V  +DK
Sbjct: 1   MEKTLETIKTNFNSIRTGRASPAFLDRVEVEYYGSPVNLKSLAQVSVPDGGTLLVQPYDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + S+E+ I +SNLGL P  +G V+R+ +P+ T ERR  L+KV    AE+ KI++RNIR
Sbjct: 61  SSLKSIEKAISKSNLGLTPSNDGNVIRLSIPQLTSERRKELLKVVAKIAEEGKIAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +   +K  K  K SED V  L  D+QK+TD  IK +DS +++K+KE+M
Sbjct: 121 RDAIKAYEKLEKEKKLSEDNVKDLSGDLQKVTDEFIKKVDSLYKQKEKELM 171


>gi|15799854|ref|NP_285866.1| ribosome recycling factor [Escherichia coli O157:H7 EDL933]
 gi|15829428|ref|NP_308201.1| ribosome recycling factor [Escherichia coli O157:H7 str. Sakai]
 gi|16128165|ref|NP_414714.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24111607|ref|NP_706117.1| ribosome recycling factor [Shigella flexneri 2a str. 301]
 gi|26246119|ref|NP_752158.1| ribosome recycling factor [Escherichia coli CFT073]
 gi|30061729|ref|NP_835900.1| ribosome recycling factor [Shigella flexneri 2a str. 2457T]
 gi|74310792|ref|YP_309211.1| ribosome recycling factor [Shigella sonnei Ss046]
 gi|82542771|ref|YP_406718.1| ribosome recycling factor [Shigella boydii Sb227]
 gi|82775562|ref|YP_401909.1| ribosome recycling factor [Shigella dysenteriae Sd197]
 gi|89107052|ref|AP_000832.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
           W3110]
 gi|91209242|ref|YP_539228.1| ribosome recycling factor [Escherichia coli UTI89]
 gi|110640391|ref|YP_668119.1| ribosome recycling factor [Escherichia coli 536]
 gi|110804224|ref|YP_687744.1| ribosome recycling factor [Shigella flexneri 5 str. 8401]
 gi|157155211|ref|YP_001461341.1| ribosome recycling factor [Escherichia coli E24377A]
 gi|157159637|ref|YP_001456955.1| ribosome recycling factor [Escherichia coli HS]
 gi|168751391|ref|ZP_02776413.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4113]
 gi|168755785|ref|ZP_02780792.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4401]
 gi|168764321|ref|ZP_02789328.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4501]
 gi|168770354|ref|ZP_02795361.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4486]
 gi|168777009|ref|ZP_02802016.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4196]
 gi|168782064|ref|ZP_02807071.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4076]
 gi|168789281|ref|ZP_02814288.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC869]
 gi|170021475|ref|YP_001726429.1| ribosome recycling factor [Escherichia coli ATCC 8739]
 gi|170079808|ref|YP_001729128.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170683322|ref|YP_001742300.1| ribosome recycling factor [Escherichia coli SMS-3-5]
 gi|187731916|ref|YP_001878974.1| ribosome recycling factor [Shigella boydii CDC 3083-94]
 gi|188496088|ref|ZP_03003358.1| ribosome releasing factor [Escherichia coli 53638]
 gi|191166361|ref|ZP_03028193.1| ribosome releasing factor [Escherichia coli B7A]
 gi|191172803|ref|ZP_03034340.1| ribosome releasing factor [Escherichia coli F11]
 gi|193063223|ref|ZP_03044314.1| ribosome releasing factor [Escherichia coli E22]
 gi|193067565|ref|ZP_03048532.1| ribosome releasing factor [Escherichia coli E110019]
 gi|194428316|ref|ZP_03060858.1| ribosome releasing factor [Escherichia coli B171]
 gi|194433418|ref|ZP_03065697.1| ribosome releasing factor [Shigella dysenteriae 1012]
 gi|194439153|ref|ZP_03071235.1| ribosome releasing factor [Escherichia coli 101-1]
 gi|195938146|ref|ZP_03083528.1| ribosome recycling factor [Escherichia coli O157:H7 str. EC4024]
 gi|208809164|ref|ZP_03251501.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4206]
 gi|208812775|ref|ZP_03254104.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4045]
 gi|208819126|ref|ZP_03259446.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4042]
 gi|209398036|ref|YP_002268780.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4115]
 gi|209917362|ref|YP_002291446.1| ribosome recycling factor [Escherichia coli SE11]
 gi|215485333|ref|YP_002327764.1| ribosome recycling factor [Escherichia coli O127:H6 str. E2348/69]
 gi|217325138|ref|ZP_03441222.1| ribosome releasing factor [Escherichia coli O157:H7 str. TW14588]
 gi|218547627|ref|YP_002381418.1| ribosome recycling factor [Escherichia fergusonii ATCC 35469]
 gi|218552752|ref|YP_002385665.1| ribosome recycling factor [Escherichia coli IAI1]
 gi|218557113|ref|YP_002390026.1| ribosome recycling factor [Escherichia coli S88]
 gi|218688047|ref|YP_002396259.1| ribosome recycling factor [Escherichia coli ED1a]
 gi|218693637|ref|YP_002401304.1| ribosome recycling factor [Escherichia coli 55989]
 gi|218698592|ref|YP_002406221.1| ribosome recycling factor [Escherichia coli IAI39]
 gi|218703426|ref|YP_002410945.1| ribosome recycling factor [Escherichia coli UMN026]
 gi|227884915|ref|ZP_04002720.1| ribosome recycling factor [Escherichia coli 83972]
 gi|237704331|ref|ZP_04534812.1| ribosome-recycling factor [Escherichia sp. 3_2_53FAA]
 gi|238899570|ref|YP_002925366.1| ribosome recycling factor [Escherichia coli BW2952]
 gi|253774801|ref|YP_003037632.1| ribosome recycling factor [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254037591|ref|ZP_04871668.1| ribosome-recycling factor [Escherichia sp. 1_1_43]
 gi|254160291|ref|YP_003043399.1| ribosome recycling factor [Escherichia coli B str. REL606]
 gi|254791305|ref|YP_003076142.1| ribosome recycling factor [Escherichia coli O157:H7 str. TW14359]
 gi|256021604|ref|ZP_05435469.1| ribosome recycling factor [Shigella sp. D9]
 gi|256025484|ref|ZP_05439349.1| ribosome recycling factor [Escherichia sp. 4_1_40B]
 gi|260842404|ref|YP_003220182.1| ribosome recycling factor [Escherichia coli O103:H2 str. 12009]
 gi|260853382|ref|YP_003227273.1| ribosome recycling factor [Escherichia coli O26:H11 str. 11368]
 gi|260866321|ref|YP_003232723.1| ribosome recycling factor [Escherichia coli O111:H- str. 11128]
 gi|261226926|ref|ZP_05941207.1| ribosome recycling factor [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255330|ref|ZP_05947863.1| ribosome recycling factor [Escherichia coli O157:H7 str. FRIK966]
 gi|291280994|ref|YP_003497812.1| Ribosome recycling factor [Escherichia coli O55:H7 str. CB9615]
 gi|293403241|ref|ZP_06647338.1| frr [Escherichia coli FVEC1412]
 gi|293408264|ref|ZP_06652104.1| ribosome recycling factor [Escherichia coli B354]
 gi|293418057|ref|ZP_06660679.1| ribosome recycling factor [Escherichia coli B185]
 gi|293476829|ref|ZP_06665237.1| ribosome recycling factor [Escherichia coli B088]
 gi|297521925|ref|ZP_06940311.1| ribosome recycling factor [Escherichia coli OP50]
 gi|298378777|ref|ZP_06988661.1| ribosome-recycling factor [Escherichia coli FVEC1302]
 gi|300816212|ref|ZP_07096435.1| ribosome recycling factor [Escherichia coli MS 107-1]
 gi|300824105|ref|ZP_07104225.1| ribosome recycling factor [Escherichia coli MS 119-7]
 gi|300900790|ref|ZP_07118934.1| ribosome recycling factor [Escherichia coli MS 198-1]
 gi|300901991|ref|ZP_07120018.1| ribosome recycling factor [Escherichia coli MS 84-1]
 gi|300920146|ref|ZP_07136597.1| ribosome recycling factor [Escherichia coli MS 115-1]
 gi|300923036|ref|ZP_07139103.1| ribosome recycling factor [Escherichia coli MS 182-1]
 gi|300932126|ref|ZP_07147411.1| ribosome recycling factor [Escherichia coli MS 187-1]
 gi|300938579|ref|ZP_07153312.1| ribosome recycling factor [Escherichia coli MS 21-1]
 gi|300949796|ref|ZP_07163770.1| ribosome recycling factor [Escherichia coli MS 116-1]
 gi|300956055|ref|ZP_07168380.1| ribosome recycling factor [Escherichia coli MS 175-1]
 gi|300984932|ref|ZP_07177197.1| ribosome recycling factor [Escherichia coli MS 200-1]
 gi|300993607|ref|ZP_07180463.1| ribosome recycling factor [Escherichia coli MS 45-1]
 gi|301025948|ref|ZP_07189432.1| ribosome recycling factor [Escherichia coli MS 69-1]
 gi|301028665|ref|ZP_07191886.1| ribosome recycling factor [Escherichia coli MS 196-1]
 gi|301049915|ref|ZP_07196840.1| ribosome recycling factor [Escherichia coli MS 185-1]
 gi|301305308|ref|ZP_07211404.1| ribosome recycling factor [Escherichia coli MS 124-1]
 gi|301330030|ref|ZP_07222714.1| ribosome recycling factor [Escherichia coli MS 78-1]
 gi|301646495|ref|ZP_07246370.1| ribosome recycling factor [Escherichia coli MS 146-1]
 gi|306815228|ref|ZP_07449377.1| ribosome recycling factor [Escherichia coli NC101]
 gi|307136772|ref|ZP_07496128.1| ribosome recycling factor [Escherichia coli H736]
 gi|307311381|ref|ZP_07591023.1| ribosome recycling factor [Escherichia coli W]
 gi|309796349|ref|ZP_07690758.1| ribosome recycling factor [Escherichia coli MS 145-7]
 gi|312966308|ref|ZP_07780534.1| ribosome recycling factor [Escherichia coli 2362-75]
 gi|312970272|ref|ZP_07784454.1| ribosome recycling factor [Escherichia coli 1827-70]
 gi|331640626|ref|ZP_08341774.1| ribosome recycling factor [Escherichia coli H736]
 gi|331645315|ref|ZP_08346426.1| ribosome recycling factor [Escherichia coli M605]
 gi|331651077|ref|ZP_08352105.1| ribosome recycling factor [Escherichia coli M718]
 gi|331661243|ref|ZP_08362175.1| ribosome recycling factor [Escherichia coli TA206]
 gi|331661546|ref|ZP_08362470.1| ribosome recycling factor [Escherichia coli TA143]
 gi|331666413|ref|ZP_08367294.1| ribosome recycling factor [Escherichia coli TA271]
 gi|331671678|ref|ZP_08372476.1| ribosome recycling factor [Escherichia coli TA280]
 gi|331680751|ref|ZP_08381410.1| ribosome recycling factor [Escherichia coli H591]
 gi|331681557|ref|ZP_08382194.1| ribosome recycling factor [Escherichia coli H299]
 gi|332282846|ref|ZP_08395259.1| ribosome-recycling factor [Shigella sp. D9]
 gi|67472290|sp|P0A805|RRF_ECOLI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|67472291|sp|P0A806|RRF_ECOL6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|67472292|sp|P0A807|RRF_ECO57 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|67472293|sp|P0A808|RRF_SHIFL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122424957|sp|Q1RG17|RRF_ECOUT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123147265|sp|Q0T837|RRF_SHIF8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123148410|sp|Q0TLG1|RRF_ECOL5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123560535|sp|Q325W8|RRF_SHIBS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123563477|sp|Q32JT7|RRF_SHIDS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123618027|sp|Q3Z5I6|RRF_SHISS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166991554|sp|A7ZHR2|RRF_ECO24 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166991555|sp|A7ZWB8|RRF_ECOHS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044054|sp|B1IQG9|RRF_ECOLC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703260|sp|B7MBF3|RRF_ECO45 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703261|sp|B7NID4|RRF_ECO7I RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703262|sp|B7M1X4|RRF_ECO8A RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703263|sp|B7N839|RRF_ECOLU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703264|sp|B1LGX4|RRF_ECOSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703265|sp|B7LWB1|RRF_ESCF3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749928|sp|B5Z0F1|RRF_ECO5E RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749929|sp|B6HZE6|RRF_ECOSE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229564224|sp|B1XD41|RRF_ECODH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689500|sp|B2U315|RRF_SHIB3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809510|sp|B7UIL7|RRF_ECO27 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809511|sp|B7LGN3|RRF_ECO55 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809512|sp|B7MP32|RRF_ECO81 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|259494540|sp|C4ZRR4|RRF_ECOBW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|13399451|pdb|1EK8|A Chain A, Crystal Structure Of The Ribosome Recycling Factor (Rrf)
           From Escherichia Coli
 gi|71042411|pdb|1ZN0|A Chain A, Coordinates Of Rrf And Ef-G Fitted Into Cryo-Em Map Of The
           50s Subunit Bound With Both Ef-G (Gdpnp) And Rrf
 gi|71042414|pdb|1ZN1|A Chain A, Coordinates Of Rrf Fitted Into Cryo-Em Map Of The 70s
           Post- Termination Complex
 gi|169404635|pdb|2RDO|8 Chain 8, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound
 gi|12512897|gb|AAG54474.1|AE005193_4 ribosome releasing factor [Escherichia coli O157:H7 str. EDL933]
 gi|26106516|gb|AAN78702.1|AE016755_202 Ribosome recycling factor [Escherichia coli CFT073]
 gi|147771|gb|AAA24607.1| ribosome releasing factor (gtg start codon) [Escherichia coli]
 gi|806329|dbj|BAA02599.1| ribosome releasing factor (FRR) [Escherichia coli]
 gi|1552749|gb|AAB08601.1| ribosome release factor [Escherichia coli]
 gi|1786368|gb|AAC73283.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13359630|dbj|BAB33597.1| ribosome releasing factor [Escherichia coli O157:H7 str. Sakai]
 gi|21239027|dbj|BAB96748.1| ribosome recycling factor [Escherichia coli str. K12 substr. W3110]
 gi|24050375|gb|AAN41824.1| ribosome releasing factor [Shigella flexneri 2a str. 301]
 gi|30039971|gb|AAP15705.1| ribosome releasing factor [Shigella flexneri 2a str. 2457T]
 gi|73854269|gb|AAZ86976.1| ribosome releasing factor [Shigella sonnei Ss046]
 gi|81239710|gb|ABB60420.1| ribosome releasing factor [Shigella dysenteriae Sd197]
 gi|81244182|gb|ABB64890.1| ribosome releasing factor [Shigella boydii Sb227]
 gi|91070816|gb|ABE05697.1| ribosome recycling factor [Escherichia coli UTI89]
 gi|110341983|gb|ABG68220.1| ribosome recycling factor [Escherichia coli 536]
 gi|110613772|gb|ABF02439.1| ribosome releasing factor [Shigella flexneri 5 str. 8401]
 gi|157065317|gb|ABV04572.1| ribosome releasing factor [Escherichia coli HS]
 gi|157077241|gb|ABV16949.1| ribosome recycling factor [Escherichia coli E24377A]
 gi|169756403|gb|ACA79102.1| ribosome recycling factor [Escherichia coli ATCC 8739]
 gi|169887643|gb|ACB01350.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170521040|gb|ACB19218.1| ribosome releasing factor [Escherichia coli SMS-3-5]
 gi|187428908|gb|ACD08182.1| ribosome releasing factor [Shigella boydii CDC 3083-94]
 gi|187767671|gb|EDU31515.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4196]
 gi|188014582|gb|EDU52704.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4113]
 gi|188491287|gb|EDU66390.1| ribosome releasing factor [Escherichia coli 53638]
 gi|189000476|gb|EDU69462.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4076]
 gi|189357057|gb|EDU75476.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4401]
 gi|189360728|gb|EDU79147.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4486]
 gi|189365640|gb|EDU84056.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4501]
 gi|189371119|gb|EDU89535.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC869]
 gi|190903612|gb|EDV63329.1| ribosome releasing factor [Escherichia coli B7A]
 gi|190906953|gb|EDV66555.1| ribosome releasing factor [Escherichia coli F11]
 gi|192931131|gb|EDV83734.1| ribosome releasing factor [Escherichia coli E22]
 gi|192958977|gb|EDV89413.1| ribosome releasing factor [Escherichia coli E110019]
 gi|194413691|gb|EDX29971.1| ribosome releasing factor [Escherichia coli B171]
 gi|194418346|gb|EDX34436.1| ribosome releasing factor [Shigella dysenteriae 1012]
 gi|194421972|gb|EDX37977.1| ribosome releasing factor [Escherichia coli 101-1]
 gi|208728965|gb|EDZ78566.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4206]
 gi|208734052|gb|EDZ82739.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4045]
 gi|208739249|gb|EDZ86931.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4042]
 gi|209159436|gb|ACI36869.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4115]
 gi|209745824|gb|ACI71219.1| ribosome releasing factor [Escherichia coli]
 gi|209745826|gb|ACI71220.1| ribosome releasing factor [Escherichia coli]
 gi|209745828|gb|ACI71221.1| ribosome releasing factor [Escherichia coli]
 gi|209745830|gb|ACI71222.1| ribosome releasing factor [Escherichia coli]
 gi|209745832|gb|ACI71223.1| ribosome releasing factor [Escherichia coli]
 gi|209910621|dbj|BAG75695.1| ribosome releasing factor [Escherichia coli SE11]
 gi|215263405|emb|CAS07725.1| ribosome recycling factor [Escherichia coli O127:H6 str. E2348/69]
 gi|217321359|gb|EEC29783.1| ribosome releasing factor [Escherichia coli O157:H7 str. TW14588]
 gi|218350369|emb|CAU96052.1| ribosome recycling factor [Escherichia coli 55989]
 gi|218355168|emb|CAQ87775.1| ribosome recycling factor [Escherichia fergusonii ATCC 35469]
 gi|218359520|emb|CAQ97058.1| ribosome recycling factor [Escherichia coli IAI1]
 gi|218363882|emb|CAR01547.1| ribosome recycling factor [Escherichia coli S88]
 gi|218368578|emb|CAR16315.1| ribosome recycling factor [Escherichia coli IAI39]
 gi|218425611|emb|CAR06397.1| ribosome recycling factor [Escherichia coli ED1a]
 gi|218430523|emb|CAR11389.1| ribosome recycling factor [Escherichia coli UMN026]
 gi|222032002|emb|CAP74741.1| ribosome recycling factor [Escherichia coli LF82]
 gi|226840697|gb|EEH72699.1| ribosome-recycling factor [Escherichia sp. 1_1_43]
 gi|226902243|gb|EEH88502.1| ribosome-recycling factor [Escherichia sp. 3_2_53FAA]
 gi|227838053|gb|EEJ48519.1| ribosome recycling factor [Escherichia coli 83972]
 gi|238863488|gb|ACR65486.1| ribosome recycling factor [Escherichia coli BW2952]
 gi|242376003|emb|CAQ30686.1| ribosome recycling factor [Escherichia coli BL21(DE3)]
 gi|253325845|gb|ACT30447.1| ribosome recycling factor [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253972192|gb|ACT37863.1| ribosome releasing factor [Escherichia coli B str. REL606]
 gi|253976401|gb|ACT42071.1| ribosome releasing factor [Escherichia coli BL21(DE3)]
 gi|254590705|gb|ACT70066.1| ribosome recycling factor [Escherichia coli O157:H7 str. TW14359]
 gi|257752031|dbj|BAI23533.1| ribosome recycling factor [Escherichia coli O26:H11 str. 11368]
 gi|257757551|dbj|BAI29048.1| ribosome recycling factor [Escherichia coli O103:H2 str. 12009]
 gi|257762677|dbj|BAI34172.1| ribosome recycling factor [Escherichia coli O111:H- str. 11128]
 gi|260450624|gb|ACX41046.1| ribosome recycling factor [Escherichia coli DH1]
 gi|281177397|dbj|BAI53727.1| ribosome releasing factor [Escherichia coli SE15]
 gi|281599527|gb|ADA72511.1| Ribosome recycling factor [Shigella flexneri 2002017]
 gi|284919947|emb|CBG33002.1| ribosome recycling factor [Escherichia coli 042]
 gi|290760867|gb|ADD54828.1| Ribosome recycling factor [Escherichia coli O55:H7 str. CB9615]
 gi|291321282|gb|EFE60724.1| ribosome recycling factor [Escherichia coli B088]
 gi|291430156|gb|EFF03170.1| frr [Escherichia coli FVEC1412]
 gi|291430775|gb|EFF03773.1| ribosome recycling factor [Escherichia coli B185]
 gi|291472515|gb|EFF14997.1| ribosome recycling factor [Escherichia coli B354]
 gi|294492515|gb|ADE91271.1| ribosome recycling factor [Escherichia coli IHE3034]
 gi|298281111|gb|EFI22612.1| ribosome-recycling factor [Escherichia coli FVEC1302]
 gi|299878297|gb|EFI86508.1| ribosome recycling factor [Escherichia coli MS 196-1]
 gi|300298344|gb|EFJ54729.1| ribosome recycling factor [Escherichia coli MS 185-1]
 gi|300306582|gb|EFJ61102.1| ribosome recycling factor [Escherichia coli MS 200-1]
 gi|300317085|gb|EFJ66869.1| ribosome recycling factor [Escherichia coli MS 175-1]
 gi|300355739|gb|EFJ71609.1| ribosome recycling factor [Escherichia coli MS 198-1]
 gi|300395747|gb|EFJ79285.1| ribosome recycling factor [Escherichia coli MS 69-1]
 gi|300405877|gb|EFJ89415.1| ribosome recycling factor [Escherichia coli MS 84-1]
 gi|300406530|gb|EFJ90068.1| ribosome recycling factor [Escherichia coli MS 45-1]
 gi|300412843|gb|EFJ96153.1| ribosome recycling factor [Escherichia coli MS 115-1]
 gi|300420663|gb|EFK03974.1| ribosome recycling factor [Escherichia coli MS 182-1]
 gi|300450828|gb|EFK14448.1| ribosome recycling factor [Escherichia coli MS 116-1]
 gi|300456461|gb|EFK19954.1| ribosome recycling factor [Escherichia coli MS 21-1]
 gi|300460102|gb|EFK23595.1| ribosome recycling factor [Escherichia coli MS 187-1]
 gi|300523382|gb|EFK44451.1| ribosome recycling factor [Escherichia coli MS 119-7]
 gi|300531419|gb|EFK52481.1| ribosome recycling factor [Escherichia coli MS 107-1]
 gi|300839413|gb|EFK67173.1| ribosome recycling factor [Escherichia coli MS 124-1]
 gi|300843941|gb|EFK71701.1| ribosome recycling factor [Escherichia coli MS 78-1]
 gi|301075281|gb|EFK90087.1| ribosome recycling factor [Escherichia coli MS 146-1]
 gi|305850890|gb|EFM51345.1| ribosome recycling factor [Escherichia coli NC101]
 gi|306908360|gb|EFN38858.1| ribosome recycling factor [Escherichia coli W]
 gi|307552022|gb|ADN44797.1| ribosome recycling factor [Escherichia coli ABU 83972]
 gi|307629748|gb|ADN74052.1| ribosome recycling factor [Escherichia coli UM146]
 gi|308120053|gb|EFO57315.1| ribosome recycling factor [Escherichia coli MS 145-7]
 gi|309700380|emb|CBI99668.1| ribosome recycling factor [Escherichia coli ETEC H10407]
 gi|310337770|gb|EFQ02881.1| ribosome recycling factor [Escherichia coli 1827-70]
 gi|312289551|gb|EFR17445.1| ribosome recycling factor [Escherichia coli 2362-75]
 gi|312944780|gb|ADR25607.1| ribosome recycling factor [Escherichia coli O83:H1 str. NRG 857C]
 gi|313646768|gb|EFS11227.1| ribosome recycling factor [Shigella flexneri 2a str. 2457T]
 gi|315059390|gb|ADT73717.1| ribosome recycling factor [Escherichia coli W]
 gi|315134862|dbj|BAJ42021.1| ribosome recycling factor [Escherichia coli DH1]
 gi|315254974|gb|EFU34942.1| ribosome recycling factor [Escherichia coli MS 85-1]
 gi|315285261|gb|EFU44706.1| ribosome recycling factor [Escherichia coli MS 110-3]
 gi|315294576|gb|EFU53923.1| ribosome recycling factor [Escherichia coli MS 153-1]
 gi|315300676|gb|EFU59903.1| ribosome recycling factor [Escherichia coli MS 16-3]
 gi|315616344|gb|EFU96962.1| ribosome recycling factor [Escherichia coli 3431]
 gi|320173347|gb|EFW48550.1| Ribosome recycling factor [Shigella dysenteriae CDC 74-1112]
 gi|320179914|gb|EFW54858.1| Ribosome recycling factor [Shigella boydii ATCC 9905]
 gi|320186593|gb|EFW61318.1| Ribosome recycling factor [Shigella flexneri CDC 796-83]
 gi|320190302|gb|EFW64952.1| Ribosome recycling factor [Escherichia coli O157:H7 str. EC1212]
 gi|320196952|gb|EFW71573.1| Ribosome recycling factor [Escherichia coli WV_060327]
 gi|320200303|gb|EFW74889.1| Ribosome recycling factor [Escherichia coli EC4100B]
 gi|320639978|gb|EFX09563.1| ribosome recycling factor [Escherichia coli O157:H7 str. G5101]
 gi|320644748|gb|EFX13792.1| ribosome recycling factor [Escherichia coli O157:H- str. 493-89]
 gi|320652904|gb|EFX21142.1| ribosome recycling factor [Escherichia coli O157:H- str. H 2687]
 gi|320658292|gb|EFX26021.1| ribosome recycling factor [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320663602|gb|EFX30886.1| ribosome recycling factor [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668915|gb|EFX35710.1| ribosome recycling factor [Escherichia coli O157:H7 str. LSU-61]
 gi|323157991|gb|EFZ44093.1| ribosome recycling factor [Escherichia coli EPECa14]
 gi|323160209|gb|EFZ46168.1| ribosome recycling factor [Escherichia coli E128010]
 gi|323165873|gb|EFZ51655.1| ribosome recycling factor [Shigella sonnei 53G]
 gi|323170963|gb|EFZ56612.1| ribosome recycling factor [Escherichia coli LT-68]
 gi|323176486|gb|EFZ62078.1| ribosome recycling factor [Escherichia coli 1180]
 gi|323181679|gb|EFZ67093.1| ribosome recycling factor [Escherichia coli 1357]
 gi|323190428|gb|EFZ75703.1| ribosome recycling factor [Escherichia coli RN587/1]
 gi|323380051|gb|ADX52319.1| ribosome recycling factor [Escherichia coli KO11]
 gi|323935012|gb|EGB31385.1| ribosome recycling protein [Escherichia coli E1520]
 gi|323939952|gb|EGB36150.1| ribosome recycling protein [Escherichia coli E482]
 gi|323945647|gb|EGB41696.1| ribosome recycling protein [Escherichia coli H120]
 gi|323950829|gb|EGB46706.1| ribosome recycling protein [Escherichia coli H252]
 gi|323955133|gb|EGB50908.1| ribosome recycling protein [Escherichia coli H263]
 gi|323959933|gb|EGB55580.1| ribosome recycling protein [Escherichia coli H489]
 gi|323964935|gb|EGB60401.1| ribosome recycling protein [Escherichia coli M863]
 gi|323970651|gb|EGB65907.1| ribosome recycling protein [Escherichia coli TA007]
 gi|323975660|gb|EGB70756.1| ribosome recycling protein [Escherichia coli TW10509]
 gi|324008234|gb|EGB77453.1| ribosome recycling factor [Escherichia coli MS 57-2]
 gi|324014110|gb|EGB83329.1| ribosome recycling factor [Escherichia coli MS 60-1]
 gi|324017821|gb|EGB87040.1| ribosome recycling factor [Escherichia coli MS 117-3]
 gi|324112417|gb|EGC06394.1| ribosome recycling protein [Escherichia fergusonii B253]
 gi|324118292|gb|EGC12187.1| ribosome recycling protein [Escherichia coli E1167]
 gi|325496104|gb|EGC93963.1| ribosome recycling factor [Escherichia fergusonii ECD227]
 gi|326339773|gb|EGD63581.1| Ribosome recycling factor [Escherichia coli O157:H7 str. 1044]
 gi|326345108|gb|EGD68851.1| Ribosome recycling factor [Escherichia coli O157:H7 str. 1125]
 gi|327255151|gb|EGE66754.1| ribosome recycling factor [Escherichia coli STEC_7v]
 gi|330910022|gb|EGH38532.1| ribosome recycling factor [Escherichia coli AA86]
 gi|331040372|gb|EGI12579.1| ribosome recycling factor [Escherichia coli H736]
 gi|331046072|gb|EGI18191.1| ribosome recycling factor [Escherichia coli M605]
 gi|331051531|gb|EGI23580.1| ribosome recycling factor [Escherichia coli M718]
 gi|331052285|gb|EGI24324.1| ribosome recycling factor [Escherichia coli TA206]
 gi|331061461|gb|EGI33424.1| ribosome recycling factor [Escherichia coli TA143]
 gi|331066624|gb|EGI38501.1| ribosome recycling factor [Escherichia coli TA271]
 gi|331071523|gb|EGI42880.1| ribosome recycling factor [Escherichia coli TA280]
 gi|331072214|gb|EGI43550.1| ribosome recycling factor [Escherichia coli H591]
 gi|331081778|gb|EGI52939.1| ribosome recycling factor [Escherichia coli H299]
 gi|332095214|gb|EGJ00243.1| ribosome recycling factor [Shigella boydii 5216-82]
 gi|332098804|gb|EGJ03764.1| ribosome recycling factor [Shigella boydii 3594-74]
 gi|332105198|gb|EGJ08544.1| ribosome-recycling factor [Shigella sp. D9]
 gi|332341505|gb|AEE54839.1| ribosome recycling factor [Escherichia coli UMNK88]
 gi|332762066|gb|EGJ92337.1| ribosome recycling factor [Shigella flexneri 2747-71]
 gi|332762175|gb|EGJ92444.1| ribosome recycling factor [Shigella flexneri 4343-70]
 gi|332765019|gb|EGJ95247.1| ribosome recycling factor [Shigella flexneri K-671]
 gi|332768674|gb|EGJ98854.1| ribosome recycling factor [Shigella flexneri 2930-71]
 gi|333009268|gb|EGK28724.1| ribosome recycling factor [Shigella flexneri K-218]
 gi|333010666|gb|EGK30099.1| ribosome recycling factor [Shigella flexneri VA-6]
 gi|333011010|gb|EGK30429.1| ribosome recycling factor [Shigella flexneri K-272]
 gi|333021805|gb|EGK41054.1| ribosome recycling factor [Shigella flexneri K-227]
 gi|333022235|gb|EGK41474.1| ribosome recycling factor [Shigella flexneri K-304]
          Length = 185

 Score =  150 bits (380), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+
Sbjct: 72  RSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++D+QK+TD+ IK I++   +K+ E+M F
Sbjct: 132 RRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF 185


>gi|304396647|ref|ZP_07378528.1| ribosome recycling factor [Pantoea sp. aB]
 gi|304356156|gb|EFM20522.1| ribosome recycling factor [Pantoea sp. aB]
          Length = 185

 Score =  150 bits (380), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFKTTISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I +S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ ++SVRN+
Sbjct: 72  RSLSPAVEKAIMKSDLGLNPSSAGTDIRVPLPALTEERRKDLIKIVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++++QK+TD+ IK +D+   EK+ E+M F
Sbjct: 132 RRDANDKIKALLKDKEISEDDERRAQDEVQKMTDAYIKKVDAALSEKESELMDF 185


>gi|209518711|ref|ZP_03267527.1| ribosome recycling factor [Burkholderia sp. H160]
 gi|209500825|gb|EEA00865.1| ribosome recycling factor [Burkholderia sp. H160]
          Length = 186

 Score =  150 bits (380), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 109/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + V  W+
Sbjct: 13  KMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIGVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV  VE+ I ES LGLNP   G V+R+P+P  TEERR  L KV  + AE ++++VRN+
Sbjct: 73  KKMVQVVEKAIRESELGLNPATHGDVIRVPMPALTEERRRELTKVVRSEAETARVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM
Sbjct: 133 RRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVTTKEAEIM 184


>gi|312829653|emb|CBX34495.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           ECT-R 2]
          Length = 184

 Score =  150 bits (380), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 113/176 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V E R+LV+S 
Sbjct: 9   KSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINVPEARLLVISP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  VA +E+ I  +NLG+NP   G+V+RI VP  TEERR   VK      E++K+SVR
Sbjct: 69  YDKTSVADIEKAIIAANLGVNPTSNGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD  D LKK  K+G  +ED + S   D+QK TD++IK ID    +K+K+IM  
Sbjct: 129 NIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKEKDIMSV 184


>gi|212704264|ref|ZP_03312392.1| hypothetical protein DESPIG_02319 [Desulfovibrio piger ATCC 29098]
 gi|212672344|gb|EEB32827.1| hypothetical protein DESPIG_02319 [Desulfovibrio piger ATCC 29098]
          Length = 186

 Score =  150 bits (380), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRM   ++ L++D   LRTGR + +++D +K + YG+  P++Q+A+V V + R +
Sbjct: 7   LLDTEDRMEKAMAALERDFQKLRTGRATTALVDGIKADYYGTPTPISQMASVAVPDSRTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  ++ VE+ I +S+LGL P+ +G+++RI +P  TEERR  LVKVA  Y E +K
Sbjct: 67  TIQPWDKGGISVVEKAILKSDLGLTPVNDGRIIRINIPPLTEERRKELVKVARKYTEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K    +ED     E ++QK+TD  + + D   + K+KEIM  
Sbjct: 127 VAVRNVRRDANDSLKKLEKEKAITEDEQKKAEAEVQKLTDKFVADADKRSQAKEKEIMDI 186


>gi|71083606|ref|YP_266325.1| ribosome recycling factor [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062719|gb|AAZ21722.1| Ribosome recycling factor [Candidatus Pelagibacter ubique HTCC1062]
          Length = 183

 Score =  150 bits (380), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 80/172 (46%), Positives = 110/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  TI   +K++ +LRTGR + SMLDLVKV+ YG  +PLNQV+++T  + R + + VWD
Sbjct: 10  KMDKTIEVFQKELTSLRTGRANSSMLDLVKVDVYGQAMPLNQVSSITTPDARTINIQVWD 69

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              V  V+  I +S LGLNP ++GQ++R+PVP+  EERR  + K+  +  EK KIS+RNI
Sbjct: 70  LNNVPLVDTAIKKSELGLNPQIDGQLIRLPVPDLNEERRTEIKKLIKSMGEKCKISIRNI 129

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+  D LK   K    SED     E  +Q  TD  IK ID+  E K+KEIM
Sbjct: 130 RREANDDLKNLVKEKIISEDEEKINEKLVQSFTDEHIKIIDTKVEVKEKEIM 181


>gi|227500094|ref|ZP_03930165.1| ribosome recycling factor [Anaerococcus tetradius ATCC 35098]
 gi|227217809|gb|EEI83106.1| ribosome recycling factor [Anaerococcus tetradius ATCC 35098]
          Length = 186

 Score =  150 bits (379), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 110/173 (63%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           D M   +   +K + T++ GR + ++LD +    YG+  P+NQ A V++ E R+LV+  W
Sbjct: 12  DEMNKAVESFEKRISTIKAGRATEAILDGITFSYYGTETPINQAATVSIPEARLLVIKPW 71

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  +  +E+ I +SN+G+ P  +G+++R+P P+ TEERR    K    YAE SKI +RN
Sbjct: 72  DKSNIGPIEKAILKSNVGITPQNDGEIIRLPFPQLTEERRKQYTKEVDTYAEDSKIIIRN 131

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            RR+ M+ +KKS KSG  +ED   +LE++IQKITD  I+ ++    +K KE+M
Sbjct: 132 KRREAMEEVKKSEKSGDITEDDRYTLEDEIQKITDKRIEELEKIAAKKNKELM 184


>gi|134299822|ref|YP_001113318.1| ribosome recycling factor [Desulfotomaculum reducens MI-1]
 gi|172044307|sp|A4J5Z0|RRF_DESRM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|134052522|gb|ABO50493.1| ribosome recycling factor [Desulfotomaculum reducens MI-1]
          Length = 184

 Score =  150 bits (379), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 118/180 (65%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + +D M  ++  ++++  +LR GR +PS+LD V V  YG+  PLNQ+AN++V E R+L
Sbjct: 6   ISSAEDHMKKSVDVVRREFASLRAGRATPSILDKVTVSYYGTPTPLNQLANISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  VE+ I +S++G+ P  +G V+R+ +P+ T+ERR  LVKV    AE+ +
Sbjct: 66  VIQPWDKSVIPEVEKAILKSDVGITPSSDGTVIRLIIPQLTQERRTELVKVIKKKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D +K  +K G   ED     ++++QK+TD  +K ID   + K++EIM  
Sbjct: 126 VAVRNIRRDTNDSIKAKQKDG-IPEDEAKRGQDELQKLTDKYVKEIDEMVKAKEQEIMQV 184


>gi|77408576|ref|ZP_00785312.1| ribosome recycling factor [Streptococcus agalactiae COH1]
 gi|77172850|gb|EAO75983.1| ribosome recycling factor [Streptococcus agalactiae COH1]
          Length = 185

 Score =  150 bits (379), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 113/175 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++R   +   L ++   +R GR + S+LD ++VE YG+  PLNQ+A++TV E R+L++S 
Sbjct: 10  QERFEQSHQSLSREFAGIRAGRANASLLDRIQVEYYGAPTPLNQLASITVPEARVLLISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +KI++R
Sbjct: 70  FDKSSIKDIERAINESDLGINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD MD   K  K+ + +ED + SLE DIQK TD  +K+ID     K+KE++ 
Sbjct: 130 NIRRDAMDEAXKQEKNKEITEDDLKSLEKDIQKATDDAVKHIDEMTVNKEKELLE 184


>gi|94310380|ref|YP_583590.1| ribosome recycling factor [Cupriavidus metallidurans CH34]
 gi|166231214|sp|Q1LNF5|RRF_RALME RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|93354232|gb|ABF08321.1| ribosome recycling factor [Cupriavidus metallidurans CH34]
          Length = 186

 Score =  150 bits (379), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVA V++ + R + 
Sbjct: 8   KSVEQKMQKSIEAFKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVAAVSLADARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I + +LGLNP   G V+R+P+P  TEERR  L KV    AE +K+
Sbjct: 68  VQPWEKKMVQAVEKAIRDGDLGLNPATMGDVIRVPMPPLTEERRRELTKVVKGEAEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  +  KK  K    SED     ++++QK+TD  +  ID    EK+KEIM
Sbjct: 128 AVRNLRRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDKFVAEIDKLVAEKEKEIM 184


>gi|86146887|ref|ZP_01065206.1| ribosome recycling factor [Vibrio sp. MED222]
 gi|85835339|gb|EAQ53478.1| ribosome recycling factor [Vibrio sp. MED222]
          Length = 185

 Score =  150 bits (379), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + VE YG+  PL QVANV   + R L 
Sbjct: 7   KDAQERMVKSVDALKNSLQKIRTGRAHPSLLSGLTVEYYGAPTPLTQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK +   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKTLTPLVEKAIMTSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +KN+D     K+KE+M  
Sbjct: 127 AIRNIRRDANGDLKALLKDKEISEDEDRKAQDEIQKLTDAAVKNVDEVLAVKEKELMEV 185


>gi|299067462|emb|CBJ38661.1| Ribosome recycling factor (Ribosome-releasing factor) [Ralstonia
           solanacearum CMR15]
          Length = 186

 Score =  150 bits (379), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVANV + + R + V  W+
Sbjct: 13  KMQKSIDAFKADLAKVRTGRAHAGLLDHVQVDYYGSMVPISQVANVGLSDARTISVQPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV++VE+ I +++LGLNP   G+V+R+P+P  TEERR  L KV  +  E +K++VRN+
Sbjct: 73  KKMVSAVEKAIRDADLGLNPATMGEVIRVPMPPLTEERRKELTKVVKSEGEDAKVAVRNV 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  +  KK  K    SED     ++++QK+TD  +  +D    EK KEIM
Sbjct: 133 RRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDRFVAEVDKLVAEKDKEIM 184


>gi|254427174|ref|ZP_05040881.1| ribosome recycling factor [Alcanivorax sp. DG881]
 gi|196193343|gb|EDX88302.1| ribosome recycling factor [Alcanivorax sp. DG881]
          Length = 185

 Score =  150 bits (379), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 77/180 (42%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 6   DLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D++N  + RM  ++  L   M  +RTGR  PS+LD + +E YG+  PLNQ+ N++V E R
Sbjct: 4   DIRNDAQSRMKKSLEALDTAMKRVRTGRAHPSLLDNITIEYYGAETPLNQMGNISVEEGR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L +S +DK ++  +ER I  S+LGLNP   G ++R+P+P  TEE R  LVKV  A AEK
Sbjct: 64  TLTISPFDKSLIPQIERAIMMSDLGLNPSTSGTLIRLPLPPLTEETRRDLVKVVRAEAEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++SVRN+RRD    LK+  K  + SED     E  IQ++TD  +  ++S  +EK++E+M
Sbjct: 124 ARVSVRNVRRDANGDLKELLKEKEISEDEQRRGEEQIQQLTDKMVAQVESVLKEKEEELM 183


>gi|160940991|ref|ZP_02088330.1| hypothetical protein CLOBOL_05885 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436081|gb|EDP13848.1| hypothetical protein CLOBOL_05885 [Clostridium bolteae ATCC
           BAA-613]
          Length = 183

 Score =  150 bits (379), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 112/179 (62%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+  +D+M  T+  L  D  T+R GR +P +LD +KV+ YG+  PL QV NV+V E RM
Sbjct: 3   ELKVYEDKMNKTLDVLLSDYGTIRAGRANPHVLDKIKVDYYGTPTPLQQVGNVSVPEARM 62

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+  W+K ++  +E+ I  S LG+NP  +G  +R+  PE TEERR  + K      + +
Sbjct: 63  IVIQPWEKSLLKPIEKAILTSELGINPTNDGNCIRLVFPEMTEERRKEVSKDVKKKGDNA 122

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           K+++RNIRRD  +  KK+ K+G  SED +  +   +QK+TD  ++ +D   EEK KEIM
Sbjct: 123 KVALRNIRRDANEAFKKAEKAGDISEDDLTEMTEKMQKLTDKMVEKVDKAVEEKTKEIM 181


>gi|125718424|ref|YP_001035557.1| ribosome recycling factor [Streptococcus sanguinis SK36]
 gi|323351162|ref|ZP_08086818.1| ribosome recycling factor [Streptococcus sanguinis VMC66]
 gi|166231520|sp|A3CPA2|RRF_STRSV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|125498341|gb|ABN45007.1| Ribosome recycling factor, putative [Streptococcus sanguinis SK36]
 gi|322122386|gb|EFX94097.1| ribosome recycling factor [Streptococcus sanguinis VMC66]
 gi|324991441|gb|EGC23374.1| ribosome recycling factor [Streptococcus sanguinis SK353]
 gi|324993795|gb|EGC25714.1| ribosome recycling factor [Streptococcus sanguinis SK405]
 gi|324994886|gb|EGC26799.1| ribosome recycling factor [Streptococcus sanguinis SK678]
 gi|325687319|gb|EGD29341.1| ribosome recycling factor [Streptococcus sanguinis SK72]
 gi|325690743|gb|EGD32744.1| ribosome recycling factor [Streptococcus sanguinis SK115]
 gi|325694795|gb|EGD36700.1| ribosome recycling factor [Streptococcus sanguinis SK150]
 gi|325696189|gb|EGD38080.1| ribosome recycling factor [Streptococcus sanguinis SK160]
 gi|327460953|gb|EGF07286.1| ribosome recycling factor [Streptococcus sanguinis SK1057]
 gi|327463069|gb|EGF09390.1| ribosome recycling factor [Streptococcus sanguinis SK1]
 gi|327474670|gb|EGF20075.1| ribosome recycling factor [Streptococcus sanguinis SK408]
 gi|327490228|gb|EGF22016.1| ribosome recycling factor [Streptococcus sanguinis SK1058]
 gi|332358733|gb|EGJ36556.1| ribosome recycling factor [Streptococcus sanguinis SK355]
 gi|332359004|gb|EGJ36825.1| ribosome recycling factor [Streptococcus sanguinis SK49]
 gi|332367318|gb|EGJ45053.1| ribosome recycling factor [Streptococcus sanguinis SK1059]
          Length = 185

 Score =  150 bits (379), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTHSHQSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERALNASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTANKEKELL 183


>gi|282855676|ref|ZP_06264985.1| ribosome recycling factor [Pyramidobacter piscolens W5455]
 gi|282586476|gb|EFB91735.1| ribosome recycling factor [Pyramidobacter piscolens W5455]
          Length = 182

 Score =  150 bits (379), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 75/176 (42%), Positives = 115/176 (65%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N+ ++M   +  L  +   +RTGR  P +++ VKV+ YGS  P+ Q+AN+TV E RML++
Sbjct: 5   NLDEKMAKVLEHLDSEFQGIRTGRAHPGLVEGVKVDYYGSLTPIKQLANITVPEARMLII 64

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + +DK  V  +E+ I  +N+GL P V+G  +R+ VPE T ERR   VK+A   AE++KI+
Sbjct: 65  APFDKGAVKLIEKAILAANIGLTPNVDGSNIRLVVPELTGERRKEFVKMASKAAEEAKIA 124

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +RNIRRD  D  KK  K+ + +ED +  + +D QKITD  I  +D  F++K+KEI+
Sbjct: 125 LRNIRRDANDAYKKQEKASEITEDDLKKMLDDAQKITDKFIARVDDEFKKKEKEIL 180


>gi|310764947|gb|ADP09897.1| ribosome recycling factor [Erwinia sp. Ejp617]
          Length = 185

 Score =  150 bits (379), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + V+ YGS  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFKNHISKIRTGRASPSILDGIMVDYYGSATPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D LK   K  + SED     + D+QK+TD  IK +D+   +K+ E+M F
Sbjct: 132 RRDANDKLKALLKDKEISEDDDRRAQEDVQKMTDIFIKKVDASLADKETELMDF 185


>gi|327470583|gb|EGF16039.1| ribosome recycling factor [Streptococcus sanguinis SK330]
          Length = 185

 Score =  150 bits (379), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTHSHQSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERALNASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTANKEKELL 183


>gi|167032162|ref|YP_001667393.1| ribosome recycling factor [Pseudomonas putida GB-1]
 gi|189044066|sp|B0KSA2|RRF_PSEPG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166858650|gb|ABY97057.1| ribosome recycling factor [Pseudomonas putida GB-1]
          Length = 185

 Score =  150 bits (379), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  L +++  +RTGR  PS+LD VKV A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMTKSLEALGRNLAAIRTGRAHPSILDTVKVTAWGSEMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A   AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQASGVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD +  LKK  K  + SED      ++IQK+TD  +  +D+ F+ K+K++M
Sbjct: 127 AVRNVRRDALADLKKLTKDKEISEDEERRAADEIQKLTDKFVAEVDAAFKAKEKDLM 183


>gi|58585062|ref|YP_198635.1| ribosome recycling factor [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|75497580|sp|Q5GRI1|RRF_WOLTR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|58419378|gb|AAW71393.1| Ribosome recycling factor [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 185

 Score =  150 bits (379), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 115/176 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+RM  TI     D+  +RTGR S S+LD + V  YG H  LNQVA V+V + + L++ V
Sbjct: 10  KERMLKTIQSFYNDIKGIRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVTDNKTLLIKV 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD  ++  V+  I  +NL LNP+VEG  +RI +P+ T+E R  LVK+ H +AE +++++R
Sbjct: 70  WDIGVIGEVKNAILNANLNLNPVVEGNTIRIVLPDLTQETRERLVKLLHQFAENARVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD M+ +++ +++ K SED   + + +IQ ITD  IK ID     K+K+I+++
Sbjct: 130 NIRRDIMEEIERMQENKKISEDDFHNAKKEIQNITDDNIKKIDGELSIKEKDILNY 185


>gi|294340704|emb|CAZ89096.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Thiomonas sp. 3As]
          Length = 186

 Score =  150 bits (379), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 115/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N +++M  +I  LK D+  +RTGR    +LD V V+ YG+ + +NQVAN+ +++ R + 
Sbjct: 8   KNTEEKMHKSIESLKLDLAKVRTGRAHTGLLDHVMVDYYGTMMAINQVANMNLVDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I ES+LGLNP  +G ++R+P+P  TEERR  LVKV     E +K+
Sbjct: 68  VQPWEKKMVQAVEKAIRESDLGLNPQTQGDIIRVPMPALTEERRRDLVKVIKQEGEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD    LK   K+ + SED     ++++QKITD  I  ID    +K+ EIM
Sbjct: 128 AVRNLRRDANQSLKDLVKAKEVSEDDERRAQDEVQKITDRCIAEIDKQLAQKEAEIM 184


>gi|227503382|ref|ZP_03933431.1| ribosome recycling factor [Corynebacterium accolens ATCC 49725]
 gi|306836376|ref|ZP_07469354.1| ribosome recycling factor [Corynebacterium accolens ATCC 49726]
 gi|227075885|gb|EEI13848.1| ribosome recycling factor [Corynebacterium accolens ATCC 49725]
 gi|304567736|gb|EFM43323.1| ribosome recycling factor [Corynebacterium accolens ATCC 49726]
          Length = 185

 Score =  150 bits (379), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 115/175 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++ M  ++   ++ ++T+RTGR +P+M + +  E YG+  P+ Q+A ++V EPRML++  
Sbjct: 10  EEHMTASVEHTREQLVTIRTGRANPAMFNGLIAEYYGAPTPITQMATISVPEPRMLLIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +++ M+  +E  I  S+LG+NP  +G VLR+ VP+ TEERR  +VK+A +  E  KI++R
Sbjct: 70  YEQSMIQEIENSIRNSDLGVNPTNDGHVLRVTVPQLTEERRKEMVKLAKSKGEDGKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR  M+ LKK +K G+  ED V + E +++KIT   ++ +D   E K+ E+M 
Sbjct: 130 NIRRKAMEQLKKLQKDGEEGEDEVLAAEKEMEKITAGYVEQVDKLVENKESELME 184


>gi|238916787|ref|YP_002930304.1| ribosome recycling factor [Eubacterium eligens ATCC 27750]
 gi|238872147|gb|ACR71857.1| ribosome recycling factor [Eubacterium eligens ATCC 27750]
          Length = 187

 Score =  150 bits (378), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 75/181 (41%), Positives = 118/181 (65%), Gaps = 3/181 (1%)

Query: 7   LQNIKD---RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++NIKD   RM  ++  LK++ +T+R GR +P +LD ++V+ YG+  P+ QVANV+V E 
Sbjct: 5   MENIKDIEGRMQKSVDNLKEEYVTIRAGRANPHILDRLRVDYYGTPTPIQQVANVSVPEA 64

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ +  W+  ++  +E+ I  S+LGL P  +G+ +R+  PE TE+RR  L K      +
Sbjct: 65  RMIQIQPWEASLIKDIEKAILVSDLGLTPNNDGKTIRLVFPELTEDRRKELAKDIKKKGD 124

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +K+++RNIRRD  D +KK  K+G  S+D   + E++IQKITD  I  IDS  ++K KEI
Sbjct: 125 NAKVAIRNIRRDANDAIKKENKAGDISDDEAKNSEDEIQKITDKYIAMIDSAIDDKTKEI 184

Query: 184 M 184
           +
Sbjct: 185 L 185


>gi|239617981|ref|YP_002941303.1| ribosome recycling factor [Kosmotoga olearia TBF 19.5.1]
 gi|259494547|sp|C5CF34|RRF_KOSOT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|239506812|gb|ACR80299.1| ribosome recycling factor [Kosmotoga olearia TBF 19.5.1]
          Length = 185

 Score =  150 bits (378), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  +   + ++   +RTGR SP++L+ +KV+ YG   P+NQ+A + V E R L
Sbjct: 6   LKDAEERMKKSTEKISEEFSHMRTGRPSPAILEEIKVDYYGVPTPINQLATINVSEDRSL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+K M++ +E+ I  SNLGL PI +G V+R+  P  T E+R   VK++   AEK K
Sbjct: 66  IIRPWEKNMLSHIEKAILASNLGLTPINDGNVVRLNFPIPTTEQREKWVKLSKEIAEKGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD +   K+  K+ + +ED +   E ++QK+TD  ++ +D  FE+KKKEIM F
Sbjct: 126 IAVRNIRRDVLKEAKEMEKNKEMTEDDLRRFEEELQKLTDKYVEEMDKLFEKKKKEIMEF 185


>gi|146297354|ref|YP_001181125.1| ribosome recycling factor [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|226703256|sp|A4XLZ9|RRF_CALS8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145410930|gb|ABP67934.1| ribosome recycling factor [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 184

 Score =  150 bits (378), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M   I  LK++  T+R GR +P +LD V V+ YG   P+ Q+A++TV E RM+
Sbjct: 5   IQIAEEKMKKAIETLKEEFATVRAGRANPHILDKVMVDYYGVPTPIPQLASITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W+  M+  +E+ I +++LG+NP  +G+V+R+  PE TEERR  LVK     AE +K
Sbjct: 65  VIQPWEARMLKEIEKAIQKADLGVNPANDGKVIRLIFPELTEERRKELVKQVKKMAEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRR+ +D  KK +K+ + +ED +   E D+QK+ D  I+ I+     K+KEIM 
Sbjct: 125 VAIRNIRREAIDEYKKMKKNNEITEDDLKDAEEDVQKLHDKYIEQIEKLLSAKEKEIME 183


>gi|259501578|ref|ZP_05744480.1| ribosome recycling factor [Lactobacillus iners DSM 13335]
 gi|302191448|ref|ZP_07267702.1| ribosome recycling factor [Lactobacillus iners AB-1]
 gi|309804225|ref|ZP_07698302.1| ribosome recycling factor [Lactobacillus iners LactinV 11V1-d]
 gi|309805502|ref|ZP_07699547.1| ribosome recycling factor [Lactobacillus iners LactinV 09V1-c]
 gi|309807192|ref|ZP_07701166.1| ribosome recycling factor [Lactobacillus iners LactinV 03V1-b]
 gi|309808808|ref|ZP_07702693.1| ribosome recycling factor [Lactobacillus iners LactinV 01V1-a]
 gi|309809446|ref|ZP_07703304.1| ribosome recycling factor [Lactobacillus iners SPIN 2503V10-D]
 gi|312875782|ref|ZP_07735774.1| ribosome recycling factor [Lactobacillus iners LEAF 2053A-b]
 gi|315653424|ref|ZP_07906346.1| ribosome recycling factor [Lactobacillus iners ATCC 55195]
 gi|325911800|ref|ZP_08174204.1| ribosome recycling factor [Lactobacillus iners UPII 143-D]
 gi|325913480|ref|ZP_08175846.1| ribosome recycling factor [Lactobacillus iners UPII 60-B]
 gi|329919873|ref|ZP_08276811.1| ribosome recycling factor [Lactobacillus iners SPIN 1401G]
 gi|259167096|gb|EEW51591.1| ribosome recycling factor [Lactobacillus iners DSM 13335]
 gi|308163628|gb|EFO65898.1| ribosome recycling factor [Lactobacillus iners LactinV 11V1-d]
 gi|308165153|gb|EFO67391.1| ribosome recycling factor [Lactobacillus iners LactinV 09V1-c]
 gi|308166413|gb|EFO68618.1| ribosome recycling factor [Lactobacillus iners LactinV 03V1-b]
 gi|308167934|gb|EFO70067.1| ribosome recycling factor [Lactobacillus iners LactinV 01V1-a]
 gi|308170118|gb|EFO72153.1| ribosome recycling factor [Lactobacillus iners SPIN 2503V10-D]
 gi|311088686|gb|EFQ47138.1| ribosome recycling factor [Lactobacillus iners LEAF 2053A-b]
 gi|315489349|gb|EFU78989.1| ribosome recycling factor [Lactobacillus iners ATCC 55195]
 gi|325476306|gb|EGC79468.1| ribosome recycling factor [Lactobacillus iners UPII 143-D]
 gi|325477249|gb|EGC80395.1| ribosome recycling factor [Lactobacillus iners UPII 60-B]
 gi|328936963|gb|EGG33393.1| ribosome recycling factor [Lactobacillus iners SPIN 1401G]
          Length = 185

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 123/183 (67%), Gaps = 1/183 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ VI ++  K  M  +IS  +K++  +R G  + S+LD +KVE YG   PL Q++++T+
Sbjct: 1   MSNVI-IEKAKANMSKSISVFEKELGGIRAGVANASLLDGIKVEYYGVPTPLTQMSSITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+++ +DK  + ++E  I  S+LG+ P  +G V+RI +P+ T ERR+ + K    
Sbjct: 60  PEARVLMITPFDKTTLNNIEHAILASDLGITPANDGSVVRIVIPQLTGERRIEIAKKVGK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++KI++RNIRR+GMD LKK +K G+ +ED +   E D+QKITD+  K++D+  ++K 
Sbjct: 120 LAEQAKIAIRNIRREGMDALKKQQKDGEITEDDLHKFEKDMQKITDNATKDVDALADKKS 179

Query: 181 KEI 183
           KEI
Sbjct: 180 KEI 182


>gi|227504802|ref|ZP_03934851.1| ribosome recycling factor [Corynebacterium striatum ATCC 6940]
 gi|227198652|gb|EEI78700.1| ribosome recycling factor [Corynebacterium striatum ATCC 6940]
          Length = 185

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 111/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++ M  ++   ++ ++T+RTGR +P+M + +  E YG+  P+ Q+A ++V EPRM+++  
Sbjct: 10  EEHMTASVEHTREQLITIRTGRANPAMFNGLVAEYYGAPTPITQMATISVPEPRMMLIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +++ M+  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  LVK A    E  KI++R
Sbjct: 70  YEQSMIHEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDLVKQAKGKGEDGKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRR  MD LKK +K G A ED V + E +++K T   I  +D     K+ E+M
Sbjct: 130 NIRRKAMDQLKKLQKDGDAGEDEVVAAEKEMEKTTAGYIDQVDKLVANKENELM 183


>gi|218710315|ref|YP_002417936.1| ribosome recycling factor [Vibrio splendidus LGP32]
 gi|218323334|emb|CAV19511.1| Ribosome recycling factor [Vibrio splendidus LGP32]
          Length = 195

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + VE YG+  PL QVANV   + R L 
Sbjct: 17  KDAQERMVKSVDALKNSLQKIRTGRAHPSLLSGLTVEYYGAPTPLTQVANVIAEDARTLA 76

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK +   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 77  ITVFDKTLTPLVEKAIMTSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAEGGRV 136

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +KN+D     K+KE+M  
Sbjct: 137 AIRNIRRDANGDLKALLKDKEISEDEDRKAQDEIQKLTDAAVKNVDEVLAVKEKELMEV 195


>gi|308185743|ref|YP_003929874.1| Ribosome recycling factor [Pantoea vagans C9-1]
 gi|308056253|gb|ADO08425.1| Ribosome recycling factor [Pantoea vagans C9-1]
          Length = 219

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/187 (41%), Positives = 119/187 (63%), Gaps = 1/187 (0%)

Query: 1   MNQVIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
            N + D++   D RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VT
Sbjct: 33  FNVINDIKKDADTRMEKCVEAFKTTISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVT 92

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           V + R L ++V+D+ +  +VE+ I +S+LGLNP   G  +R+P+P  TEERR  L+K+  
Sbjct: 93  VEDSRTLKINVFDRSLSQAVEKAIMKSDLGLNPSSAGTDIRVPLPALTEERRKDLIKIVR 152

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             AE+ ++SVRN+RRD  D +K   K  + SED     ++++QK+TD+ IK +D+   EK
Sbjct: 153 GEAEQGRVSVRNVRRDANDKIKALLKDKEISEDDERRAQDEVQKMTDAYIKKVDAALSEK 212

Query: 180 KKEIMHF 186
           + E+M F
Sbjct: 213 ETELMDF 219


>gi|283798096|ref|ZP_06347249.1| ribosome recycling factor [Clostridium sp. M62/1]
 gi|291074241|gb|EFE11605.1| ribosome recycling factor [Clostridium sp. M62/1]
 gi|295091732|emb|CBK77839.1| ribosome recycling factor [Clostridium cf. saccharolyticum K10]
          Length = 184

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 110/175 (62%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            +++M  +   L  +  ++R GR +P +LD ++V+ YG+  PL QVAN++V EPRM+ + 
Sbjct: 8   FEEKMDKSYDALLNEFSSIRAGRANPHVLDKLRVDYYGAPTPLQQVANISVPEPRMIQIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            W+K +V ++E+ I  S+LG+NP  +G V+R+  PE TEERR  L K      E +K++V
Sbjct: 68  PWEKSLVKAIEKAILTSDLGINPTNDGSVIRLIFPELTEERRKELAKDVKKKGEGAKVAV 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRRD  D  KK  K+ + SED ++  E  IQK+TD  I  ID   E K KEIM
Sbjct: 128 RNIRRDANDTFKKMEKANEISEDDLSDAEEKIQKMTDKMIDKIDKAVETKTKEIM 182


>gi|283835234|ref|ZP_06354975.1| ribosome recycling factor [Citrobacter youngae ATCC 29220]
 gi|291068945|gb|EFE07054.1| ribosome recycling factor [Citrobacter youngae ATCC 29220]
          Length = 185

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMDKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE ++++VRN+
Sbjct: 72  RSMGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEGARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++++QK+TD+ IK +D+   EK+ E+M F
Sbjct: 132 RRDANDKVKALLKDKEISEDDDRRSQDEVQKLTDAAIKKVDAALAEKETELMQF 185


>gi|153853432|ref|ZP_01994841.1| hypothetical protein DORLON_00830 [Dorea longicatena DSM 13814]
 gi|149754218|gb|EDM64149.1| hypothetical protein DORLON_00830 [Dorea longicatena DSM 13814]
          Length = 183

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 117/178 (65%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M  TI  L  ++  +R GR +P++L+ + V+ YG+  P+ QVANV+V E RM+
Sbjct: 5   LKPFEEKMKKTIGNLDGELSAIRAGRANPNVLNKIMVDYYGTPTPIQQVANVSVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K+MV  +E+ I  S+LG+NP  +G  +R+  PE TE+RR  LVK      E +K
Sbjct: 65  QIQPWEKKMVREIEKAIMTSDLGINPTNDGTTVRLLFPELTEDRRKELVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRDG+D +KK + S   SED +  +E+D+QK+TD  +K +D   E K KE+M
Sbjct: 125 VAIRNIRRDGIDSVKKLKGSD-VSEDEMKDMEDDLQKLTDKYVKEVDKAVEAKSKEVM 181


>gi|317505061|ref|ZP_07963008.1| ribosome recycling factor [Prevotella salivae DSM 15606]
 gi|315663839|gb|EFV03559.1| ribosome recycling factor [Prevotella salivae DSM 15606]
          Length = 186

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 115/178 (64%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM     +L  ++  +R GR + ++LD VKV++YGS VPLNQVAN++  + R +
Sbjct: 8   LSDAQERMEMAAMYLADELTHIRAGRANTAILDGVKVDSYGSKVPLNQVANISTPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S +G+ P   G+V+R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIRPWDKKAIKDIEKAIMDSGVGITPENNGEVIRLGIPQPTEERRKELVKQCNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VRN+R +  D LKK+ K G  SED+    END+QK+ D  IK ID    EK+KEIM
Sbjct: 128 VEVRNVRGEVKDKLKKAIKEG-LSEDLEKDAENDLQKVHDKFIKRIDDLLNEKQKEIM 184


>gi|306829302|ref|ZP_07462492.1| ribosome recycling factor [Streptococcus mitis ATCC 6249]
 gi|315612956|ref|ZP_07887867.1| ribosome recycling factor [Streptococcus sanguinis ATCC 49296]
 gi|322374516|ref|ZP_08049030.1| ribosome recycling factor [Streptococcus sp. C300]
 gi|331266588|ref|YP_004326218.1| ribosome recycling factor [Streptococcus oralis Uo5]
 gi|304428388|gb|EFM31478.1| ribosome recycling factor [Streptococcus mitis ATCC 6249]
 gi|315315066|gb|EFU63107.1| ribosome recycling factor [Streptococcus sanguinis ATCC 49296]
 gi|321280016|gb|EFX57055.1| ribosome recycling factor [Streptococcus sp. C300]
 gi|326683260|emb|CBZ00878.1| ribosome recycling factor [Streptococcus oralis Uo5]
          Length = 185

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KEI+ 
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKEILE 184


>gi|328946695|gb|EGG40833.1| ribosome recycling factor [Streptococcus sanguinis SK1087]
          Length = 185

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTHSHQSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERALNASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++
Sbjct: 126 VAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTANKEKELL 183


>gi|168494373|ref|ZP_02718516.1| ribosome recycling factor [Streptococcus pneumoniae CDC3059-06]
 gi|183575679|gb|EDT96207.1| ribosome recycling factor [Streptococcus pneumoniae CDC3059-06]
          Length = 185

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 114/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHHSLAREFGAIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELL 183


>gi|148984686|ref|ZP_01817954.1| ribosome recycling factor [Streptococcus pneumoniae SP3-BS71]
 gi|148988384|ref|ZP_01819831.1| ribosome recycling factor [Streptococcus pneumoniae SP6-BS73]
 gi|148998620|ref|ZP_01826060.1| ribosome recycling factor [Streptococcus pneumoniae SP11-BS70]
 gi|149002494|ref|ZP_01827428.1| ribosome recycling factor [Streptococcus pneumoniae SP14-BS69]
 gi|149006380|ref|ZP_01830092.1| ribosome recycling factor [Streptococcus pneumoniae SP18-BS74]
 gi|168485896|ref|ZP_02710404.1| ribosome recycling factor [Streptococcus pneumoniae CDC1087-00]
 gi|168575607|ref|ZP_02721543.1| ribosome recycling factor [Streptococcus pneumoniae MLV-016]
 gi|169832481|ref|YP_001694393.1| ribosome recycling factor [Streptococcus pneumoniae Hungary19A-6]
 gi|194397625|ref|YP_002037583.1| ribosome recycling factor [Streptococcus pneumoniae G54]
 gi|221231712|ref|YP_002510864.1| ribosome recycling factor [Streptococcus pneumoniae ATCC 700669]
 gi|225854450|ref|YP_002735962.1| ribosome recycling factor [Streptococcus pneumoniae JJA]
 gi|225861166|ref|YP_002742675.1| ribosome recycling factor [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650519|ref|ZP_04524771.1| ribosome recycling factor [Streptococcus pneumoniae CCRI 1974]
 gi|237820813|ref|ZP_04596658.1| ribosome recycling factor [Streptococcus pneumoniae CCRI 1974M2]
 gi|298230564|ref|ZP_06964245.1| ribosome recycling factor [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254562|ref|ZP_06978148.1| ribosome recycling factor [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298503047|ref|YP_003724987.1| ribosome recycling factor [Streptococcus pneumoniae TCH8431/19A]
 gi|307067602|ref|YP_003876568.1| ribosome recycling factor [Streptococcus pneumoniae AP200]
 gi|307127503|ref|YP_003879534.1| ribosome recycling factor [Streptococcus pneumoniae 670-6B]
 gi|226749942|sp|B5E448|RRF_STRP4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238688288|sp|B1IBA8|RRF_STRPI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809533|sp|B8ZP45|RRF_STRPJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809535|sp|C1CDU1|RRF_STRZJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809537|sp|C1CRV3|RRF_STRZT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|147755618|gb|EDK62665.1| ribosome recycling factor [Streptococcus pneumoniae SP11-BS70]
 gi|147759431|gb|EDK66423.1| ribosome recycling factor [Streptococcus pneumoniae SP14-BS69]
 gi|147762157|gb|EDK69119.1| ribosome recycling factor [Streptococcus pneumoniae SP18-BS74]
 gi|147923077|gb|EDK74192.1| ribosome recycling factor [Streptococcus pneumoniae SP3-BS71]
 gi|147926065|gb|EDK77139.1| ribosome recycling factor [Streptococcus pneumoniae SP6-BS73]
 gi|168994983|gb|ACA35595.1| ribosome recycling factor [Streptococcus pneumoniae Hungary19A-6]
 gi|183571057|gb|EDT91585.1| ribosome recycling factor [Streptococcus pneumoniae CDC1087-00]
 gi|183578469|gb|EDT98997.1| ribosome recycling factor [Streptococcus pneumoniae MLV-016]
 gi|194357292|gb|ACF55740.1| ribosome recycling factor [Streptococcus pneumoniae G54]
 gi|220674172|emb|CAR68698.1| ribosome recycling factor [Streptococcus pneumoniae ATCC 700669]
 gi|225723622|gb|ACO19475.1| ribosome recycling factor [Streptococcus pneumoniae JJA]
 gi|225727526|gb|ACO23377.1| ribosome recycling factor [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238642|gb|ADI69773.1| ribosome recycling factor [Streptococcus pneumoniae TCH8431/19A]
 gi|301799925|emb|CBW32506.1| ribosome recycling factor [Streptococcus pneumoniae OXC141]
 gi|306409139|gb|ADM84566.1| Ribosome recycling factor [Streptococcus pneumoniae AP200]
 gi|306484565|gb|ADM91434.1| ribosome recycling factor [Streptococcus pneumoniae 670-6B]
 gi|327389222|gb|EGE87567.1| ribosome recycling factor [Streptococcus pneumoniae GA04375]
 gi|332075559|gb|EGI86027.1| ribosome recycling factor [Streptococcus pneumoniae GA17545]
 gi|332076224|gb|EGI86690.1| ribosome recycling factor [Streptococcus pneumoniae GA41301]
 gi|332202800|gb|EGJ16869.1| ribosome recycling factor [Streptococcus pneumoniae GA41317]
          Length = 185

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 117/185 (63%), Gaps = 1/185 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  VI ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+
Sbjct: 1   MANVI-IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K    
Sbjct: 60  PEARVLLVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+
Sbjct: 120 VGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKE 179

Query: 181 KEIMH 185
           KE++ 
Sbjct: 180 KELLE 184


>gi|226322655|ref|ZP_03798173.1| hypothetical protein COPCOM_00427 [Coprococcus comes ATCC 27758]
 gi|225208992|gb|EEG91346.1| hypothetical protein COPCOM_00427 [Coprococcus comes ATCC 27758]
          Length = 183

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 113/173 (65%), Gaps = 1/173 (0%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  TI  L  ++ ++R GR +P++L+ + VE YG+  P+ QVAN++V E RM+ +  W
Sbjct: 10  EKMQKTIHALDTELASIRAGRANPNILNKLTVEYYGTPTPIQQVANISVPEARMIQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K+++  +E+ I  S++G+NP  +G V+R+  PE TEERR  LVK      E SK++VRN
Sbjct: 70  EKKIIKDIEKAILMSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKKKGEASKVAVRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRDG D  KK  K    SED +  LE+ IQK+TD  IK +D+  + K KE+M
Sbjct: 130 IRRDGNDAFKK-LKGTDVSEDEIQDLEDQIQKLTDKYIKEVDAAVDAKSKEVM 181


>gi|292489224|ref|YP_003532111.1| ribosome recycling factor [Erwinia amylovora CFBP1430]
 gi|291554658|emb|CBA22349.1| Ribosome recycling factor [Erwinia amylovora CFBP1430]
 gi|312173385|emb|CBX81639.1| Ribosome recycling factor [Erwinia amylovora ATCC BAA-2158]
          Length = 195

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + V+ YGS  PL Q+A+VTV + R L ++V+D
Sbjct: 22  RMEKCVEAFKNHISKIRTGRASPSILDGIMVDYYGSPTPLRQLASVTVEDSRTLKINVFD 81

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 82  RSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNV 141

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D LK   K  + SED     + D+QK+TD  IK +D+   +K+ E+M F
Sbjct: 142 RRDANDKLKALLKDKEISEDDDRRAQEDVQKMTDIFIKKVDASLADKETELMDF 195


>gi|301794085|emb|CBW36491.1| ribosome recycling factor [Streptococcus pneumoniae INV104]
 gi|332204947|gb|EGJ19012.1| ribosome recycling factor [Streptococcus pneumoniae GA47901]
          Length = 185

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ VP  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVVPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++ 
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLE 184


>gi|225858740|ref|YP_002740250.1| ribosome recycling factor [Streptococcus pneumoniae 70585]
 gi|289167793|ref|YP_003446062.1| ribosome recycling factor [Streptococcus mitis B6]
 gi|307704917|ref|ZP_07641808.1| ribosome recycling factor [Streptococcus mitis SK597]
 gi|307706446|ref|ZP_07643255.1| ribosome recycling factor [Streptococcus mitis SK321]
 gi|307708583|ref|ZP_07645047.1| ribosome recycling factor [Streptococcus mitis NCTC 12261]
 gi|307709131|ref|ZP_07645590.1| ribosome recycling factor [Streptococcus mitis SK564]
 gi|322376444|ref|ZP_08050937.1| ribosome recycling factor [Streptococcus sp. M334]
 gi|254809532|sp|C1C6S4|RRF_STRP7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|225721445|gb|ACO17299.1| ribosome recycling factor [Streptococcus pneumoniae 70585]
 gi|288907360|emb|CBJ22197.1| ribosome recycling factor [Streptococcus mitis B6]
 gi|301801786|emb|CBW34497.1| ribosome recycling factor [Streptococcus pneumoniae INV200]
 gi|307615332|gb|EFN94541.1| ribosome recycling factor [Streptococcus mitis NCTC 12261]
 gi|307618156|gb|EFN97314.1| ribosome recycling factor [Streptococcus mitis SK321]
 gi|307620077|gb|EFN99194.1| ribosome recycling factor [Streptococcus mitis SK564]
 gi|307621531|gb|EFO00577.1| ribosome recycling factor [Streptococcus mitis SK597]
 gi|321282251|gb|EFX59258.1| ribosome recycling factor [Streptococcus sp. M334]
          Length = 185

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++ 
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLE 184


>gi|22297803|ref|NP_681050.1| ribosome recycling factor [Thermosynechococcus elongatus BP-1]
 gi|34222747|sp|Q8DM64|RRF_THEEB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|22293980|dbj|BAC07812.1| ribosome releasing factor [Thermosynechococcus elongatus BP-1]
          Length = 182

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 116/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++++RM  ++   + D  ++RTGR + ++LD V V+ YG+  PL  +ANV+  +   +
Sbjct: 3   LADVEERMQKSVEATQHDFNSIRTGRANAALLDRVMVDYYGTETPLRSLANVSTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  +AS+E+ I  S+LGL P  +G  +R+ +P  T ERR  LVK A   AE  K
Sbjct: 63  LIQPYDRSTLASIEKAIQLSDLGLTPNNDGSSVRLNIPPLTTERRKELVKTAAKIAEGGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD +DH+KK+ K+G+ +ED V  L+  +QK+TD  I  ID+   EK+K+IM
Sbjct: 123 VAIRNIRRDAIDHIKKAGKAGELTEDEVKDLQEKVQKLTDKYIGKIDALLAEKEKDIM 180


>gi|289450226|ref|YP_003475249.1| ribosome recycling factor [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184773|gb|ADC91198.1| ribosome recycling factor [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 187

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 114/176 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +DRM  +I  LK+++ ++R GR +P +LD + +  YG+  PLNQVAN+ V EPRM+ +S 
Sbjct: 12  EDRMNKSIDNLKENLNSVRAGRANPHILDRITISYYGAETPLNQVANIQVPEPRMITISP 71

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD   ++ +E+ +  S++G+NP  +G+++R+  P  TEERR  L K    Y E++KI VR
Sbjct: 72  WDPSSLSLIEKAVLMSDIGINPNNDGKMIRLVFPTLTEERRKDLAKTVAKYGEETKIVVR 131

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RR+ +D  K   KS + S+D + ++E+D+QKIT+     ID     K+K++M  
Sbjct: 132 NVRREAIDKFKALHKSKELSDDDIRTVEDDVQKITNRFTAKIDEIVAAKEKDLMEI 187


>gi|146310374|ref|YP_001175448.1| ribosome recycling factor [Enterobacter sp. 638]
 gi|166991556|sp|A4W6R7|RRF_ENT38 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145317250|gb|ABP59397.1| ribosome recycling factor [Enterobacter sp. 638]
          Length = 185

 Score =  150 bits (378), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFKNQISKVRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDTRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE ++++VRN+
Sbjct: 72  RSLGPAVEKAIMASDLGLNPSSAGTDIRVPLPALTEERRKELIKVVRGEAEGARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 132 RRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKLDAALADKEAELMQF 185


>gi|292898542|ref|YP_003537911.1| ribosome recycling factor [Erwinia amylovora ATCC 49946]
 gi|291198390|emb|CBJ45497.1| ribosome recycling factor [Erwinia amylovora ATCC 49946]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + V+ YGS  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFKNHISKIRTGRASPSILDGIMVDYYGSPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D LK   K  + SED     + D+QK+TD  IK +D+   +K+ E+M F
Sbjct: 132 RRDANDKLKALLKDKEISEDDDRRAQEDVQKMTDIFIKKVDASLADKETELMDF 185


>gi|329912033|ref|ZP_08275644.1| Ribosome recycling factor [Oxalobacteraceae bacterium IMCC9480]
 gi|327545756|gb|EGF30890.1| Ribosome recycling factor [Oxalobacteraceae bacterium IMCC9480]
          Length = 186

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 119/182 (65%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           ++D++   D RM  +I  LK D+  +RTGR    MLD + V+ YG+   L QVANVT+++
Sbjct: 3   IVDVKKNTDVRMHKSIETLKTDLAKVRTGRAHVGMLDHIMVDYYGNPTQLTQVANVTLVD 62

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R L V  W+K+MV+ VE+ I +++LGLNP  +G ++R+P P  TEERR  +VK+  + A
Sbjct: 63  ARTLGVQPWEKKMVSVVEKAIRDADLGLNPSTQGDLIRVPTPALTEERRKEMVKLVKSEA 122

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E +KI++RNIRRD  + LKK  K  + SED     +++IQK+TD  +  ID    +K+KE
Sbjct: 123 EDAKIAIRNIRRDANEGLKKLIKDKECSEDDERRAQDEIQKMTDKFVAEIDKLVVDKEKE 182

Query: 183 IM 184
           ++
Sbjct: 183 VL 184


>gi|237757010|ref|ZP_04585465.1| ribosome recycling factor [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237690828|gb|EEP59981.1| ribosome recycling factor [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 184

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 121/178 (67%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM   ++  K++++ +RTGR S  +++ +K++ YG+ +PL Q+A ++  EP  +
Sbjct: 6   LKEAEKRMKGAVNKYKEELLGIRTGRASTGLVENIKIDYYGAELPLKQLATISTPEPAQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  V  +E+ + E+NLG NP  EG V+R+ +P  TEERR  +VK+ H +AE+++
Sbjct: 66  VIQTWDKSAVKLIEKALMEANLGANPQTEGNVIRLNLPPMTEERRKEVVKMIHKFAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD  ++++K +K G + +D+  +LE  +QK+TD  I+ I+   E K+KEI+
Sbjct: 126 IAIRNIRRDEKENIEKLKKEGFSEDDIKKALEK-LQKLTDKYIEEINQLTEAKEKEIL 182


>gi|331701338|ref|YP_004398297.1| ribosome-recycling factor [Lactobacillus buchneri NRRL B-30929]
 gi|329128681|gb|AEB73234.1| Ribosome-recycling factor [Lactobacillus buchneri NRRL B-30929]
          Length = 187

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 120/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M +T   L+ D+ ++R G  + S+L  V V+ YG+  PLNQ+A++T+ E R++
Sbjct: 8   LTEAKEKMKNTREVLEHDVGSIRAGHANASLLSGVMVDYYGAPTPLNQIASITIPEARVI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+GI+E++LG++P  +G  +R+ VP  TE+RR  + K   A  EKSK
Sbjct: 68  LITPYDKSALEGIEKGIYEADLGISPANDGTAIRLAVPALTEDRRKEIAKQVKATGEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RR+ MD LK+S KS   ++D +   E+ +QK+TD  IK +D    +K++E+M+
Sbjct: 128 VAIRNVRREAMDTLKRSNKSEDITDDELHRYEDQVQKLTDDAIKGVDGIVADKEQEVMN 186


>gi|168491033|ref|ZP_02715176.1| ribosome recycling factor [Streptococcus pneumoniae CDC0288-04]
 gi|183574722|gb|EDT95250.1| ribosome recycling factor [Streptococcus pneumoniae CDC0288-04]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++ 
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLE 184


>gi|229513899|ref|ZP_04403361.1| ribosome recycling factor [Vibrio cholerae TMA 21]
 gi|229349080|gb|EEO14037.1| ribosome recycling factor [Vibrio cholerae TMA 21]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLMGISVDYYGAPTPLNQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRELTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + +IQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDVLAVKEKELMEV 185


>gi|332830277|gb|EGK02905.1| ribosome-recycling factor [Dysgonomonas gadei ATCC BAA-286]
          Length = 187

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 114/177 (64%), Gaps = 1/177 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  +++M  ++ FL + +  +R G+ +P +LD +K+E YGS  PL+ VA +   + R +V
Sbjct: 10  QKAEEKMQASVEFLDETLSRIRAGKANPHILDGIKLEYYGSLTPLSGVAAINTPDARTIV 69

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  W+K+M+  VE+ I  S++G+ P   G+++R+ +P  TEERR  LVK A   AE +K+
Sbjct: 70  IQPWEKQMLKEVEKAILNSDVGITPDNNGEIIRLSIPPLTEERRKQLVKQAKQEAEDAKV 129

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RN RRD +D +KKS K G A EDM    END+QK+ D  IK ID  F  K+KEI+
Sbjct: 130 SIRNARRDAIDSIKKSVKDGVA-EDMAKDAENDMQKLHDKYIKKIDDVFALKEKEIL 185


>gi|323484222|ref|ZP_08089591.1| hypothetical protein HMPREF9474_01342 [Clostridium symbiosum
           WAL-14163]
 gi|323692104|ref|ZP_08106351.1| ribosome recycling factor [Clostridium symbiosum WAL-14673]
 gi|323402464|gb|EGA94793.1| hypothetical protein HMPREF9474_01342 [Clostridium symbiosum
           WAL-14163]
 gi|323503904|gb|EGB19719.1| ribosome recycling factor [Clostridium symbiosum WAL-14673]
          Length = 184

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 110/173 (63%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  +   L  +  ++R GR +P +LD ++V+ YG+  PL QVANV+V EPRM+++  W
Sbjct: 10  EKMVKSYEVLLDEYASIRAGRANPHVLDKLRVDYYGTPTPLQQVANVSVPEPRMILIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +++++  +E+ I  S+LG+NP  +G  +R+  PE TEERR  L K      E  K++VRN
Sbjct: 70  ERKLIKDIEKAILTSDLGINPNNDGNAIRLVFPELTEERRKELAKDVKKKGEGVKVAVRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRD  D +KK  K+G+ SED  A  E  IQKITD  I+ ID   E K KEIM
Sbjct: 130 IRRDANDAIKKMEKAGEISEDDQAEGEEKIQKITDKMIEKIDKAVEAKTKEIM 182


>gi|94986827|ref|YP_594760.1| ribosome recycling factor [Lawsonia intracellularis PHE/MN1-00]
 gi|190360249|sp|Q1MRD7|RRF_LAWIP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|94731076|emb|CAJ54439.1| Ribosome recycling factor [Lawsonia intracellularis PHE/MN1-00]
          Length = 188

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 115/175 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM   I+ L+K+   LRTGR S S++D +KV+ YG+  P+NQ+A++ + +   + +  
Sbjct: 13  QERMVKAITSLEKEFTKLRTGRASTSIVDTIKVDYYGTPTPINQLASIAIPDSSSITIQP 72

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK     +E+ I +S LGL PI +G+++RI +P  TE+RR  LVK+A  Y E +KI++R
Sbjct: 73  WDKTAFNPIEKAILKSELGLTPINDGKIIRITLPPLTEDRRKDLVKLARKYGEDTKIAIR 132

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD  + LK+  K+   SED +     DIQK+TD+ IK +++  + K+KEI+ 
Sbjct: 133 NIRRDANEQLKRLEKNKFISEDELKGFTEDIQKMTDNYIKEVETHCKTKEKEIIE 187


>gi|269926622|ref|YP_003323245.1| ribosome recycling factor [Thermobaculum terrenum ATCC BAA-798]
 gi|269790282|gb|ACZ42423.1| ribosome recycling factor [Thermobaculum terrenum ATCC BAA-798]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 117/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + RM  +I  LKKD+  +R+GR +P +++ ++VE YG   PL Q+A+++V EPRM+
Sbjct: 6   LADAEKRMRHSIDVLKKDLANIRSGRATPGLVEHIEVEYYGVPTPLIQLASISVPEPRMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ WD   +  +E+ I +S LGLNP  +G+++RI VP  TEERR +LVK+     E+ +
Sbjct: 66  AITPWDPNSIGPIEKAIQKSELGLNPSNDGKIIRILVPPLTEERRRSLVKMVRQRVEEDR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD M+ +K+ +     SED     +  +Q++TD  IK  DS  E+K++EI+
Sbjct: 126 VAIRNIRRDVMNDIKQMQHEKMISEDEARRAQEKLQQLTDKYIKEADSLGEQKEQEIL 183


>gi|220927898|ref|YP_002504807.1| ribosome recycling factor [Clostridium cellulolyticum H10]
 gi|219998226|gb|ACL74827.1| ribosome recycling factor [Clostridium cellulolyticum H10]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 117/176 (66%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           I+++M  TI+ L+ ++  +R GR +P++LD + ++ YG+  P+ QVA V++ E R++++ 
Sbjct: 9   IEEKMKKTINVLRDNLAGIRAGRANPAILDKLTIDYYGAPTPIQQVATVSIPEARVILIQ 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            W+ +++  +E+ I +S++G+NP  +G+VLR+  P  TEERR  L K A    E+SKI++
Sbjct: 69  PWEAKLLKDIEKEIQKSDIGINPNNDGKVLRLVFPALTEERRRELTKQAKKEGEESKIAI 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R+IRRD ++ +K  +KSG+ +ED +   E DIQ ITD  I  ID   E K KEIM 
Sbjct: 129 RSIRRDSIETMKAKKKSGEITEDDLKDAEKDIQNITDRYIAEIDRVIEAKDKEIME 184


>gi|88706580|ref|ZP_01104283.1| Ribosome recycling factor [Congregibacter litoralis KT71]
 gi|88699076|gb|EAQ96192.1| Ribosome recycling factor [Congregibacter litoralis KT71]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 112/182 (61%), Gaps = 1/182 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   D RM +++  L  +   +RTGR  PS+LD +KV  YG+  PLNQVANV V + R
Sbjct: 4   DIQKDADSRMQNSLEALGTNFNKIRTGRAHPSLLDGIKVSYYGADTPLNQVANVNVEDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L ++ WD+ M+  +ER I +S+LGLNP   G+V+RIP+P  TEE R   +K A + AE 
Sbjct: 64  TLSLTAWDRSMIPDIERAIMKSDLGLNPATAGEVIRIPMPALTEETRKGYIKQARSEAEA 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN RRD M  LK   K  + SED     ++ IQK+TDS +  ++     K+ +++
Sbjct: 124 ARVSIRNARRDAMGMLKDMVKDKEISEDDERRGQDQIQKLTDSFVARVEEMLTAKEADLL 183

Query: 185 HF 186
             
Sbjct: 184 EI 185


>gi|188996515|ref|YP_001930766.1| ribosome recycling factor [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931582|gb|ACD66212.1| ribosome recycling factor [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 184

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 121/178 (67%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM   ++  K++++ +RTGR S  +++ +K++ YG+ +PL Q+A ++  EP  +
Sbjct: 6   LKEAEKRMKGAVNKYKEELLGIRTGRASTGLVENIKIDYYGTELPLKQLATISTPEPAQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  V  +E+ + E+NLG NP  EG V+R+ +P  TEERR  +VK+ H +AE+++
Sbjct: 66  VIQTWDKSAVKLIEKALMEANLGANPQTEGNVIRLNLPPMTEERRKEVVKMIHKFAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD  ++++K +K G + +D+  +LE  +QK+TD  I+ I+   E K+KEI+
Sbjct: 126 IAIRNIRRDEKENIEKLKKEGFSEDDIKKALEK-LQKLTDRYIEEINQLTEAKEKEIL 182


>gi|84389789|ref|ZP_00991341.1| ribosome releasing factor [Vibrio splendidus 12B01]
 gi|84376890|gb|EAP93764.1| ribosome releasing factor [Vibrio splendidus 12B01]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + VE YG+  PL QVANV   + R L 
Sbjct: 7   KDAQERMDKSVDALKNSLQKIRTGRAHPSLLSGLTVEYYGAPTPLAQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK +   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKTLTPLVEKAILTSDLGLNPMSAGTVIRVPLPALTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD  +KN+D     K+KE+M  
Sbjct: 127 AIRNIRRDANGDLKALLKDKEISEDEDRRAQDEIQKLTDIAVKNVDEVLATKEKELMEV 185


>gi|331084701|ref|ZP_08333789.1| ribosome-recycling factor [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330410795|gb|EGG90217.1| ribosome-recycling factor [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 183

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/184 (42%), Positives = 117/184 (63%), Gaps = 3/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+ +++ N  ++M  + + L  ++ T+R GR +P +LD + V+ YGS  P+ QVANV+V
Sbjct: 1   MNERLNVFN--EKMEKSYNSLTSELATIRAGRANPHVLDKLTVDYYGSPTPIQQVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+K MV  +E+ I  S++G+NP  +G V+R+  PE TEERR  LVK    
Sbjct: 59  PEARMIQIQPWEKSMVKEIEKAILTSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  K++VRNIRRDG D  KK  K  + SED +  LE+++QK+TD  I  I+   E K 
Sbjct: 119 KGEAGKVAVRNIRRDGNDTFKK-LKGTEVSEDEIKDLEDELQKLTDKYIAQIEKAVEAKS 177

Query: 181 KEIM 184
           KE+M
Sbjct: 178 KEVM 181


>gi|296136576|ref|YP_003643818.1| ribosome recycling factor [Thiomonas intermedia K12]
 gi|295796698|gb|ADG31488.1| ribosome recycling factor [Thiomonas intermedia K12]
          Length = 186

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 115/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N +++M  +I  LK D+  +RTGR    +LD V V+ YG+ + +NQVAN+ +++ R + 
Sbjct: 8   KNTEEKMHKSIESLKLDLAKVRTGRAHTGLLDHVMVDYYGTMMAINQVANMNLVDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I ES+LGLNP  +G ++R+P+P  TEERR  LVKV     E +K+
Sbjct: 68  VQPWEKKMVQAVEKAIRESDLGLNPQTQGDIIRVPMPALTEERRRDLVKVIKQEGEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD    LK   K+ + SED     ++++QKITD  I  ID    +K+ EIM
Sbjct: 128 AVRNLRRDANQSLKDLVKAKEISEDDERRAQDEVQKITDRCIAEIDKQLAQKEAEIM 184


>gi|240146850|ref|ZP_04745451.1| ribosome recycling factor [Roseburia intestinalis L1-82]
 gi|257200994|gb|EEU99278.1| ribosome recycling factor [Roseburia intestinalis L1-82]
 gi|291536044|emb|CBL09156.1| ribosome recycling factor [Roseburia intestinalis M50/1]
 gi|291538537|emb|CBL11648.1| ribosome recycling factor [Roseburia intestinalis XB6B4]
          Length = 184

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 108/173 (62%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  T++ L ++  ++R GR +P +LD +KV+ YG+   + QVANV V EPRM+ +  W
Sbjct: 10  EKMQKTMNNLSEEFGSIRAGRANPHVLDKLKVDYYGTPTAIQQVANVNVPEPRMIQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +  MV  +E+ I  S+LG+NP  +G+V+R+  PE TEERR  L K      E +K+++RN
Sbjct: 70  EASMVKEIEKAILTSDLGINPTNDGKVIRLLFPELTEERRKELAKDVKKKGENAKVAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRD  D  KK  KS   SED V  LE+  QK+TD  I  ID   E K KEI+
Sbjct: 130 IRRDANDSFKKLSKSADVSEDEVKELEDGAQKMTDKYITEIDKAVEAKTKEIL 182


>gi|195978553|ref|YP_002123797.1| ribosome recycling factor [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225868107|ref|YP_002744055.1| ribosome recycling factor [Streptococcus equi subsp. zooepidemicus]
 gi|225870940|ref|YP_002746887.1| ribosome recycling factor [Streptococcus equi subsp. equi 4047]
 gi|226749941|sp|B4U467|RRF_STREM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809531|sp|C0MBT1|RRF_STRE4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|259494555|sp|C0MCC9|RRF_STRS7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|195975258|gb|ACG62784.1| ribosome recycling factor Frr [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225700344|emb|CAW94656.1| ribosome recycling factor [Streptococcus equi subsp. equi 4047]
 gi|225701383|emb|CAW98452.1| ribosome recycling factor [Streptococcus equi subsp. zooepidemicus]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFTQSHHSLAREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGETAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  +K ID    +K+KE++
Sbjct: 126 VSIRNIRRDAMDEAKKQEKAKEITEDELKALEKDIQKATDEAVKEIDRMTADKEKELL 183


>gi|304388991|ref|ZP_07371038.1| ribosome recycling factor [Neisseria meningitidis ATCC 13091]
 gi|304337125|gb|EFM03312.1| ribosome recycling factor [Neisseria meningitidis ATCC 13091]
          Length = 203

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 117/184 (63%), Gaps = 1/184 (0%)

Query: 2   NQVIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           N + D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+
Sbjct: 18  NMINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTL 77

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV   
Sbjct: 78  LDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRG 137

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K+
Sbjct: 138 EAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKE 197

Query: 181 KEIM 184
           +++M
Sbjct: 198 EDLM 201


>gi|312871359|ref|ZP_07731455.1| ribosome recycling factor [Lactobacillus iners LEAF 3008A-a]
 gi|312872418|ref|ZP_07732487.1| ribosome recycling factor [Lactobacillus iners LEAF 2062A-h1]
 gi|312873341|ref|ZP_07733394.1| ribosome recycling factor [Lactobacillus iners LEAF 2052A-d]
 gi|311091131|gb|EFQ49522.1| ribosome recycling factor [Lactobacillus iners LEAF 2052A-d]
 gi|311092000|gb|EFQ50375.1| ribosome recycling factor [Lactobacillus iners LEAF 2062A-h1]
 gi|311093111|gb|EFQ51459.1| ribosome recycling factor [Lactobacillus iners LEAF 3008A-a]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/183 (40%), Positives = 122/183 (66%), Gaps = 1/183 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ VI ++  K  M  +IS  +K++  +R G  + S+LD +KVE YG   PL Q++++T+
Sbjct: 1   MSNVI-IEKAKANMSKSISVFEKELGGIRAGVANASLLDGIKVEYYGVPTPLTQMSSITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+++ +DK  + ++E  I  S+LG+ P  +G V+RI +P+ T ERR+ + K    
Sbjct: 60  PEARVLMITPFDKTTLNNIEHAILASDLGITPANDGSVVRIVIPQLTGERRIEIAKKVGK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++KI++RNIRR+G+D LKK +K G+ +ED +   E DIQKITD   K++D+  ++K 
Sbjct: 120 LAEQAKIAIRNIRREGIDALKKQQKDGEITEDDLHKFEKDIQKITDDATKDVDALADKKS 179

Query: 181 KEI 183
           KEI
Sbjct: 180 KEI 182


>gi|197119126|ref|YP_002139553.1| ribosome recycling factor [Geobacter bemidjiensis Bem]
 gi|226749930|sp|B5EHV8|RRF_GEOBB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|197088486|gb|ACH39757.1| ribosome recycling factor [Geobacter bemidjiensis Bem]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 110/173 (63%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +I  L+K+   +RTGR S S+LD +KV++YG+  PLNQVA + + E R + +S WD 
Sbjct: 13  MDKSIESLRKEYQKVRTGRASTSLLDDIKVDSYGTLSPLNQVATLAIPEARTITISPWDS 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
           +M+A +E+ I  SNLGLNP  +G+++R+ +P  TEERR  +VK     AE +K+++RNIR
Sbjct: 73  KMIAPIEKAIMNSNLGLNPANDGKMIRLTLPPLTEERRKDIVKQLKRDAEDAKVALRNIR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD +D LKK  K    SED     E ++Q  T+S +  +D     K+KE+M  
Sbjct: 133 RDAIDQLKKLEKDKSISEDEQKRAEKEVQDFTNSHVAKVDEVLLHKEKEVMEV 185


>gi|188533040|ref|YP_001906837.1| ribosome recycling factor [Erwinia tasmaniensis Et1/99]
 gi|238689729|sp|B2VE11|RRF_ERWT9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|188028082|emb|CAO95939.1| Ribosome recycling factor [Erwinia tasmaniensis Et1/99]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   +  +  +RTGR SPS+LD + V+ YGS  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFRNHISKIRTGRASPSILDGIMVDYYGSATPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D LK   K  + SED     + D+QK+TD  IK +D+   +K+ E+M F
Sbjct: 132 RRDANDKLKALLKDKEISEDDDRRAQEDVQKMTDIFIKKVDAALADKETELMDF 185


>gi|148992922|ref|ZP_01822541.1| ribosome recycling factor [Streptococcus pneumoniae SP9-BS68]
 gi|168490239|ref|ZP_02714438.1| ribosome recycling factor [Streptococcus pneumoniae SP195]
 gi|147928374|gb|EDK79390.1| ribosome recycling factor [Streptococcus pneumoniae SP9-BS68]
 gi|183571379|gb|EDT91907.1| ribosome recycling factor [Streptococcus pneumoniae SP195]
 gi|332073277|gb|EGI83756.1| ribosome recycling factor [Streptococcus pneumoniae GA17570]
          Length = 185

 Score =  149 bits (377), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++ 
Sbjct: 126 VAVRNIRRDAMDEAKKREKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLE 184


>gi|199597107|ref|ZP_03210539.1| Ribosome recycling factor [Lactobacillus rhamnosus HN001]
 gi|258508619|ref|YP_003171370.1| ribosome recycling factor [Lactobacillus rhamnosus GG]
 gi|199591911|gb|EDY99985.1| Ribosome recycling factor [Lactobacillus rhamnosus HN001]
 gi|257148546|emb|CAR87519.1| Ribosome-recycling factor [Lactobacillus rhamnosus GG]
 gi|259649926|dbj|BAI42088.1| ribosome recycling factor [Lactobacillus rhamnosus GG]
          Length = 185

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 117/184 (63%), Gaps = 2/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQ+I+   +   MG T   L++++  +R GR + S+L+ + V+ YG+  PLNQ+A +TV 
Sbjct: 3   NQIIEQAKVN--MGKTEESLQRELGNIRAGRANASLLNQITVDYYGAPTPLNQMAAITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L +S +DK  + ++E  I+ S+LG+NP  +G V+R+ +P+ T ERR  + K    +
Sbjct: 61  EARVLQISPYDKSSLKNIETAINASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKF 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +E +KI+VRNIRR+G+D LK+  K G  +ED +  LE D+QK TD   K ID     K+K
Sbjct: 121 SENAKIAVRNIRREGLDKLKRQEKDGDITEDELHRLEKDMQKATDDATKRIDEIAAAKEK 180

Query: 182 EIMH 185
           EI  
Sbjct: 181 EITE 184


>gi|153831282|ref|ZP_01983949.1| ribosome recycling factor [Vibrio cholerae 623-39]
 gi|148873240|gb|EDL71375.1| ribosome recycling factor [Vibrio cholerae 623-39]
          Length = 185

 Score =  149 bits (376), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRXLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + +IQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|332362392|gb|EGJ40192.1| ribosome recycling factor [Streptococcus sanguinis SK1056]
          Length = 185

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTHSHQSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERALNASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTVNKEKELL 183


>gi|282880955|ref|ZP_06289646.1| ribosome recycling factor [Prevotella timonensis CRIS 5C-B1]
 gi|281305178|gb|EFA97247.1| ribosome recycling factor [Prevotella timonensis CRIS 5C-B1]
          Length = 186

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 116/178 (65%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++RM    ++L++ +  +R GR + ++LD V V +YGS VPLNQVANV+V + R +
Sbjct: 8   LKEAEERMQMAATYLEESLSRVRAGRANVAILDGVMVNSYGSMVPLNQVANVSVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   EK+K
Sbjct: 68  AIKPWDKKAIKDIEKAIMDSDVGITPENNGEIIRLGIPQPTEERRRDLVKQCNKIGEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I VRN+R +  D LKK+ K G  SED     EN++Q + D  IKN+D   EEK KEIM
Sbjct: 128 IEVRNVRSEIKDRLKKAVKDG-LSEDAGKDAENELQNVHDKYIKNVDRLLEEKTKEIM 184


>gi|291523272|emb|CBK81565.1| ribosome recycling factor [Coprococcus catus GD/7]
          Length = 185

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 112/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  + +M  ++  L+++  T+R GR +P +LD +KV+ YG+  PL QV NVTV E R+L
Sbjct: 6   LQPYETKMQKSLDALEREYTTIRAGRANPHILDKLKVDYYGTPTPLQQVGNVTVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+ +++  +E+ I  S++G+ P  +G+ +R+  PE TEERR  L K      + +K
Sbjct: 66  MIQPWESKLIKDIEKAILASDIGITPTNDGKSIRLVFPELTEERRKELAKDVKKKGDAAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            +VRNIRRDG D  KKS K+ + SED  A L+  +QKITD  +  +D   E K KEIM
Sbjct: 126 TAVRNIRRDGNDAFKKSNKAKEISEDEYAELQEKLQKITDKYVAMVDKAVEAKTKEIM 183


>gi|157147397|ref|YP_001454716.1| hypothetical protein CKO_03195 [Citrobacter koseri ATCC BAA-895]
 gi|157084602|gb|ABV14280.1| hypothetical protein CKO_03195 [Citrobacter koseri ATCC BAA-895]
          Length = 173

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 111/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D+
Sbjct: 1   MEKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+R
Sbjct: 61  SMSPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SED     ++++QK+TD+ IK +D+   EK+ E+M F
Sbjct: 121 RDANDKVKALLKDKEISEDDDRRSQDEVQKLTDAAIKKVDAALTEKEAELMQF 173


>gi|313885301|ref|ZP_07819052.1| ribosome recycling factor [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619407|gb|EFR30845.1| ribosome recycling factor [Eremococcus coleocola ACS-139-V-Col8]
          Length = 185

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  KDRM  ++    +++ ++R G  + S+LD ++V  YG   PLNQ+A++TV E RML
Sbjct: 6   LKETKDRMAKSVEAFSRELASIRAGVANASILDRIQVTYYGVPTPLNQLASITVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK     +E+ I +S++G+NP  +G V+R+ +P  T+ERR  LVKV     E +K
Sbjct: 66  LVTPYDKSSTTEIEKAILQSDVGINPTSDGDVIRLVIPALTKERREELVKVVGKENETAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+RNIRRD +D  KK  K+ + +ED V   E  IQ ITD  +K +D+  + K+ EIM+
Sbjct: 126 ISIRNIRRDQIDAAKKLEKNNELTEDDVKDYEKQIQAITDEKVKELDALAKAKEDEIMN 184


>gi|24380004|ref|NP_721959.1| ribosome recycling factor [Streptococcus mutans UA159]
 gi|290580017|ref|YP_003484409.1| putative ribosome recycling factor [Streptococcus mutans NN2025]
 gi|34924954|sp|Q8DSY2|RRF_STRMU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|24377992|gb|AAN59265.1|AE014993_9 putative ribosome recycling factor [Streptococcus mutans UA159]
 gi|254996916|dbj|BAH87517.1| putative ribosome recycling factor [Streptococcus mutans NN2025]
          Length = 185

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++VE YG   PLNQ+A++TV E R+L
Sbjct: 6   VEKAKERFEQSHQSLAREFGSIRAGRANASLLDRIEVEYYGVPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +DK  +  +E  I+ S++G+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVSPFDKSSLKDIEHAINASDIGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD MD  KK  K  + +ED + SLE DIQK+TD  +K+IDS    K+KE++ 
Sbjct: 126 VAIRNIRRDAMDEAKKQEKIKEITEDELKSLEKDIQKVTDEAVKHIDSMTANKEKELLE 184


>gi|300783895|ref|YP_003764186.1| ribosome recycling factor [Amycolatopsis mediterranei U32]
 gi|299793409|gb|ADJ43784.1| ribosome recycling factor [Amycolatopsis mediterranei U32]
          Length = 187

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 119/184 (64%), Gaps = 2/184 (1%)

Query: 4   VID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           VID  L + +++M   +S  K ++ ++RTGR S +M   + VE YGS  PLNQ+A+V V 
Sbjct: 3   VIDETLLDAEEKMEKAVSVAKDELQSVRTGRASSAMFSRIVVEYYGSPTPLNQLASVNVP 62

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E RM ++  +D+  + ++E+ I ES+LG+NP  +GQV+RI +P+ TEERR  +VKVA   
Sbjct: 63  EARMALIKPYDQSQLNAIEKAIRESDLGVNPSNDGQVIRIVIPQLTEERRKEMVKVAKGK 122

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E +++S+R+IRR   D L +  K G+A ED VA  E ++Q +TD+ +  +D   + K+ 
Sbjct: 123 GEDARVSIRSIRRKAKDELDRIAKDGEAGEDDVARAEKELQNLTDTYVHKVDELIKHKEA 182

Query: 182 EIMH 185
           E++ 
Sbjct: 183 ELLE 186


>gi|254670407|emb|CBA05960.1| Ribosome recycling factor [Neisseria meningitidis alpha153]
          Length = 208

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 117/184 (63%), Gaps = 1/184 (0%)

Query: 2   NQVIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           N + D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+
Sbjct: 23  NMINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTL 82

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV   
Sbjct: 83  LDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRG 142

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K+
Sbjct: 143 EAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTTKE 202

Query: 181 KEIM 184
           +++M
Sbjct: 203 EDLM 206


>gi|254805769|ref|YP_003083990.1| Ribosome recycling factor [Neisseria meningitidis alpha14]
 gi|254669311|emb|CBA08313.1| Ribosome recycling factor [Neisseria meningitidis alpha14]
 gi|316985712|gb|EFV64658.1| ribosome recycling factor [Neisseria meningitidis H44/76]
          Length = 208

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 117/184 (63%), Gaps = 1/184 (0%)

Query: 2   NQVIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           N + D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+
Sbjct: 23  NMINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTL 82

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV   
Sbjct: 83  LDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRG 142

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K+
Sbjct: 143 EAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKE 202

Query: 181 KEIM 184
           +++M
Sbjct: 203 EDLM 206


>gi|220903796|ref|YP_002479108.1| ribosome recycling factor [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868095|gb|ACL48430.1| ribosome recycling factor [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 186

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRM   ++ L +D   LRTGR + +++D +K + YG+  P++Q+A++ V + R L
Sbjct: 7   LLDAEDRMEKALAALDRDFAKLRTGRATTALVDGIKADYYGTPTPISQMASIAVPDSRTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  +A +E+ I +S+LGL P+ +G+++RI +P  TEERR  L KVA  Y+E+ K
Sbjct: 67  TIQPWDKGGIALIEKAILKSDLGLTPVNDGKLIRIVMPPLTEERRKELSKVARKYSEEGK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K    +ED      +D+QK+TD  +  +D     K+KEIM  
Sbjct: 127 VAVRNVRRDANDSLKKLEKEKTITEDEQKRATDDVQKLTDKYVAEVDKRCAAKEKEIMEI 186


>gi|168483015|ref|ZP_02707967.1| ribosome recycling factor [Streptococcus pneumoniae CDC1873-00]
 gi|172043555|gb|EDT51601.1| ribosome recycling factor [Streptococcus pneumoniae CDC1873-00]
 gi|332201410|gb|EGJ15480.1| ribosome recycling factor [Streptococcus pneumoniae GA47368]
          Length = 185

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/185 (41%), Positives = 116/185 (62%), Gaps = 1/185 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  VI ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+
Sbjct: 1   MANVI-IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+V+ +DK  +  +ER ++ S LG+ P  +G V+R+ +P  TEE R  L K    
Sbjct: 60  PEARVLLVTPFDKSSLKDIERALNASELGITPANDGSVIRLVIPALTEETRRDLAKEVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+
Sbjct: 120 VGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKE 179

Query: 181 KEIMH 185
           KE++ 
Sbjct: 180 KELLE 184


>gi|194099964|ref|YP_002003103.1| ribosome recycling factor [Neisseria gonorrhoeae NCCP11945]
 gi|291042824|ref|ZP_06568565.1| ribosome-recycling factor [Neisseria gonorrhoeae DGI2]
 gi|293398155|ref|ZP_06642360.1| ribosome recycling factor [Neisseria gonorrhoeae F62]
 gi|193935254|gb|ACF31078.1| Rrf [Neisseria gonorrhoeae NCCP11945]
 gi|291013258|gb|EFE05224.1| ribosome-recycling factor [Neisseria gonorrhoeae DGI2]
 gi|291611418|gb|EFF40488.1| ribosome recycling factor [Neisseria gonorrhoeae F62]
          Length = 208

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 117/184 (63%), Gaps = 1/184 (0%)

Query: 2   NQVIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           N + D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+
Sbjct: 23  NMINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTL 82

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV   
Sbjct: 83  LDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRG 142

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K+
Sbjct: 143 EAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKVLAAKE 202

Query: 181 KEIM 184
           +++M
Sbjct: 203 EDLM 206


>gi|315221842|ref|ZP_07863754.1| ribosome recycling factor [Streptococcus anginosus F0211]
 gi|315189075|gb|EFU22778.1| ribosome recycling factor [Streptococcus anginosus F0211]
          Length = 185

 Score =  149 bits (376), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGSIRAGRANASLLDRISVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +E  ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIEHALNASDLGITPASDGTVIRLVIPALTEETRRNLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++ 
Sbjct: 126 IAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDEAVKHIDEMTASKEKELIE 184


>gi|270292949|ref|ZP_06199160.1| ribosome recycling factor [Streptococcus sp. M143]
 gi|270278928|gb|EFA24774.1| ribosome recycling factor [Streptococcus sp. M143]
          Length = 185

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++ 
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLE 184


>gi|194337415|ref|YP_002019209.1| ribosome recycling factor [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693401|sp|B4SER6|RRF_PELPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|194309892|gb|ACF44592.1| ribosome recycling factor [Pelodictyon phaeoclathratiforme BU-1]
          Length = 186

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 111/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I+ RM  TI   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV N++VL+   L+
Sbjct: 8   QKIEPRMKKTIEAFQHEIASIRTGKATTALLDRVKVEAYGQQMPLKQVGNISVLDVHTLI 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V +WDK MV++ ER I ++NLGLNP  +GQ +R+ +P  TEERR   VK+   + E SK+
Sbjct: 68  VQIWDKSMVSATERAIRDANLGLNPAADGQNIRVSIPPLTEERRKEFVKLTKKFGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RN+RRD +  ++K  KS   SED     + D  ++     K +      K+KEIM
Sbjct: 128 SLRNLRRDMIQEIEKLEKSKAISEDDKNKGKKDADEMLHKFEKQLTELIVHKEKEIM 184


>gi|291616348|ref|YP_003519090.1| Frr [Pantoea ananatis LMG 20103]
 gi|291151378|gb|ADD75962.1| Frr [Pantoea ananatis LMG 20103]
          Length = 185

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMDKCVEAFKTTISKVRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ ++SVRN+
Sbjct: 72  RSLGPAVEKAIMASDLGLNPNSAGSDIRVPLPALTEERRKDLIKIVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K  + SED     +++IQK+TD+ IK +D+   EK+ E+M F
Sbjct: 132 RRDANDKIKALLKDKEISEDDERRSQDEIQKMTDAHIKKVDAALAEKEAELMDF 185


>gi|254496412|ref|ZP_05109292.1| ribosome recycling factor [Legionella drancourtii LLAP12]
 gi|254354359|gb|EET13014.1| ribosome recycling factor [Legionella drancourtii LLAP12]
          Length = 185

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  TI  L  DM  +RTGR +  +LD V+V+ YG+  PLNQ+AN+T  + R + 
Sbjct: 7   QDSEKRMRKTIDSLHIDMSKIRTGRANVGLLDHVQVDYYGTLTPLNQIANITASDSRTIS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K MVA+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV     E+ K+
Sbjct: 67  VTPWEKNMVAAVEKAILTSDLGLNPATNGNAIRVPMPPLTEERRKELIKVVRNEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  + LK+  K    SED      + IQK+TD  I  +D+    K+K++M  
Sbjct: 127 SIRNIRRDANNQLKELVKEKAISEDDERRAVDVIQKLTDKYILEVDALLAVKEKDLMEV 185


>gi|78356175|ref|YP_387624.1| ribosome recycling factor [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123552884|sp|Q313G7|RRF_DESDG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78218580|gb|ABB37929.1| ribosome recycling factor [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 184

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM   ++ L ++   LRTGR S S++D +KV+ YG+  P+NQ+A+V V + R +
Sbjct: 5   LLETEERMEKAVAALDREFGRLRTGRASTSLVDSIKVDYYGTPTPINQLASVAVPDSRTI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+   A VE+ I +S+LGL PI +G+++RI +P  TEERR  LVKVA  Y E +K
Sbjct: 65  TIQPWDRGAFALVEKAIMQSDLGLTPINDGKIIRISMPPLTEERRKELVKVAKKYTEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD  + +KK  K    +ED +   ++++QK+TD+ +   +    +K+KEIM 
Sbjct: 125 VAVRNIRRDANEQIKKMEKDKAITEDDMKRGQDEVQKLTDAFVAKSEKVLAKKEKEIME 183


>gi|225619145|ref|YP_002720371.1| ribosome recycling factor [Brachyspira hyodysenteriae WA1]
 gi|225213964|gb|ACN82698.1| ribosome recycling factor [Brachyspira hyodysenteriae WA1]
          Length = 182

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/176 (46%), Positives = 112/176 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ KDRM   IS L+ D+  +RTGR + S+LD VKVEAYGS +PL QV NV+  + R ++
Sbjct: 4   ESYKDRMEKAISSLQNDLKGIRTGRANASILDGVKVEAYGSSMPLKQVGNVSTPDSRTIM 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK +V+ +E+ I +++LG NP  +G  +RI VPE T+ERR  L K      E++KI
Sbjct: 64  IQPFDKGLVSDIEKAILKADLGFNPFNDGGNIRIVVPELTKERREELKKGVRHRGEEAKI 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +VRNIRRD  D +KK  K    +ED   S E  IQ  TDS IK ID     K+KE+
Sbjct: 124 AVRNIRRDENDKIKKELKDKTITEDESKSQEKKIQNDTDSYIKKIDDMINTKEKEL 179


>gi|88857974|ref|ZP_01132616.1| ribosome releasing factor [Pseudoalteromonas tunicata D2]
 gi|88819591|gb|EAR29404.1| ribosome releasing factor [Pseudoalteromonas tunicata D2]
          Length = 185

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/182 (43%), Positives = 115/182 (63%), Gaps = 1/182 (0%)

Query: 6   DLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q N   RM  ++  L   +  +RTGR  PS+LD +KV  YG+  PLNQVANV+V + R
Sbjct: 4   DIQKNAATRMQKSVEALVSQLSKIRTGRAHPSLLDGLKVMYYGAETPLNQVANVSVEDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L +SV+DK +  +VE+ I  S+LGLNP+  G ++R+P+P  TEERR  L+KV  A AE 
Sbjct: 64  TLSISVFDKSLGQAVEKAILASDLGLNPMSSGMMIRVPLPPLTEERRKDLIKVVRAEAEA 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++++RNIRRD    +K   K    SED     +++IQK+TD  IK++D+    K+ E+M
Sbjct: 124 GRVAIRNIRRDANADVKALLKDKAISEDEQRKSDDEIQKLTDKFIKDLDAKLAVKEAELM 183

Query: 185 HF 186
             
Sbjct: 184 EI 185


>gi|58698901|ref|ZP_00373766.1| ribosome recycling factor [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630154|ref|YP_002726945.1| ribosome releasing factor [Wolbachia sp. wRi]
 gi|254809543|sp|C0R2L2|RRF_WOLWR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|58534582|gb|EAL58716.1| ribosome recycling factor [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592135|gb|ACN95154.1| ribosome releasing factor [Wolbachia sp. wRi]
          Length = 185

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 113/175 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+RM  TI     D+  +RTGR S S+LD + V  YG H  LNQVA V+V++ + L + +
Sbjct: 10  KERMLKTIQSFHDDIKGVRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVIDNKTLSIKI 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD  +V  V+  I  +NL LNP+VEG  +RI +P+ T+E R  LVK+ H +AE ++I++R
Sbjct: 70  WDINVVGEVKNAILNANLNLNPVVEGNTIRIALPDLTQETREKLVKLLHQFAENARIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD M+  +K +++ + SED     + +IQ ITD+ IK ID     K+K+I++
Sbjct: 130 NIRRDIMEETEKMKENKEISEDDFHGAKKEIQNITDNNIKKIDGELSIKEKDILN 184


>gi|86610317|ref|YP_479079.1| ribosome recycling factor [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123500677|sp|Q2JHW2|RRF_SYNJB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|86558859|gb|ABD03816.1| ribosome recycling factor [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 182

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 116/182 (63%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++L  I++ M   +   ++   T+RTGR + S+LD ++VE YG   PL  +A++T  +  
Sbjct: 1   MELAEIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSS 60

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L++  +D   +A++ER I  S+LGL P  +G+V+R+ +P  TEERR  L K     AE+
Sbjct: 61  TLLIQPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEE 120

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RNIRRDG+D ++K  K+G+ SED   SL++DIQK+TD  IK ID    EK+KE+ 
Sbjct: 121 GRVSIRNIRRDGIDSVRKREKNGELSEDESKSLQDDIQKLTDRYIKKIDELLAEKEKELT 180

Query: 185 HF 186
             
Sbjct: 181 TL 182


>gi|312869006|ref|ZP_07729183.1| ribosome recycling factor [Lactobacillus oris PB013-T2-3]
 gi|311095432|gb|EFQ53699.1| ribosome recycling factor [Lactobacillus oris PB013-T2-3]
          Length = 186

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  +   L++ +  +R G+ + S+L+ VKVE YG+  PLNQVA++T+ E R L
Sbjct: 8   LNDAKQKMKKSGDALQRSLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+ ++  +E+ I+ SNLGL P  +G  +R+ +P+ TE+RR  LVK   A  EKSK
Sbjct: 68  LITPYDESILEEIEKSIYASNLGLTPQNDGSAIRLIIPQLTEDRRKELVKDVKAELEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K+G  ++D    LE  +Q  TD+ IKN++     K+KE++ 
Sbjct: 128 VAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKQVQNETDAGIKNLEDIAAAKEKELLQ 186


>gi|258627353|ref|ZP_05722137.1| Ribosome-recycling factor [Vibrio mimicus VM603]
 gi|258580391|gb|EEW05356.1| Ribosome-recycling factor [Vibrio mimicus VM603]
          Length = 173

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 108/173 (62%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L ++V+D+
Sbjct: 1   MEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVVAEDARTLAITVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
           ++   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  +++VRNIR
Sbjct: 61  DLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  + LK   K  + SED     + DIQK+TD+ +K ID     K+KE+M  
Sbjct: 121 RDANNDLKGLLKDKEISEDDERRAQEDIQKLTDAAVKKIDDVLAAKEKELMEV 173


>gi|229824928|ref|ZP_04450997.1| hypothetical protein GCWU000182_00277 [Abiotrophia defectiva ATCC
           49176]
 gi|229790931|gb|EEP27045.1| hypothetical protein GCWU000182_00277 [Abiotrophia defectiva ATCC
           49176]
          Length = 184

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 116/173 (67%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           D+M  TI+ L ++ +T+R GR +P +LD +KV+ YG   PL  VAN++V E R++ +  W
Sbjct: 10  DKMNKTINNLNEEYITIRAGRANPHILDKIKVDYYGQPSPLQSVANISVPEARIIQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +  ++ ++E+ I+ +NLG+ P  +G+ +R+  PE TEERR  L K     AE++KI++RN
Sbjct: 70  EAGLIKAIEKEINMANLGVVPNNDGKSIRLVFPELTEERRKELSKDIKKKAEQAKIAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRD ++H KK +K+ + +ED +  LE++IQKITD     I+   E+K KEIM
Sbjct: 130 IRRDAVEHFKKQQKANEITEDDLKDLEDEIQKITDKFSDEIEKMTEDKTKEIM 182


>gi|91775880|ref|YP_545636.1| ribosome recycling factor [Methylobacillus flagellatus KT]
 gi|123254405|sp|Q1H142|RRF_METFK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91709867|gb|ABE49795.1| ribosome recycling factor [Methylobacillus flagellatus KT]
          Length = 185

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 117/182 (64%), Gaps = 4/182 (2%)

Query: 7   LQNIKD----RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           +Q++K+    +M  +I  LK D+  +RTGR    +LD V+VE YGS V +NQVA+V++ +
Sbjct: 2   IQDVKNTAEQKMQKSIEALKADLSKVRTGRAHTGLLDHVQVEYYGSMVAINQVASVSLGD 61

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R L V  ++K M   VE+ I +++LGLNP   G ++R+P+P  TEERR  LVKV  + A
Sbjct: 62  ARTLNVQAYEKNMTPKVEKAIRDADLGLNPATNGDIIRVPMPMLTEERRRDLVKVVRSEA 121

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E +K+++RN+RRD  D LKK  K  + SED     ++++QK+TD  +  ID   + K+ E
Sbjct: 122 ENAKVAIRNVRRDANDALKKLVKDKEISEDDERRAQDEVQKLTDKFVAEIDKLLQTKEAE 181

Query: 183 IM 184
           +M
Sbjct: 182 LM 183


>gi|288941761|ref|YP_003444001.1| ribosome recycling factor [Allochromatium vinosum DSM 180]
 gi|288897133|gb|ADC62969.1| ribosome recycling factor [Allochromatium vinosum DSM 180]
          Length = 185

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+  +RM  ++  L  ++  +RTGR  PS+LD + V  YG  VP+ QVAN+   + R L+
Sbjct: 7   QDAAERMAKSVESLTHELAKIRTGRAHPSLLDHIMVSYYGQDVPIRQVANINAEDARTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W++ MV ++E+ I +S+LGLNP   G  +R+P+P  TEERR  L+KVA   AE++++
Sbjct: 67  VTPWERNMVQAIEKAIMQSDLGLNPNTAGTAIRVPMPPLTEERRRDLIKVARNEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD    LK+  K    SED     +  +QK+TD  +K +D+   EK++++M
Sbjct: 127 AVRNIRRDANHDLKELVKDKMISEDDERRGQEIVQKLTDQYVKEVDAVLAEKEQDLM 183


>gi|89900777|ref|YP_523248.1| ribosome recycling factor [Rhodoferax ferrireducens T118]
 gi|122479258|sp|Q21WY6|RRF_RHOFD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|89345514|gb|ABD69717.1| ribosome recycling factor [Rhodoferax ferrireducens T118]
          Length = 186

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 114/175 (65%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++ +M  +I   K ++  +RTGR +P++LD V V+ YG+ +P++QVANV++L+ R + V 
Sbjct: 10  VEGKMDQSIEAFKHNLTKIRTGRANPALLDTVHVDYYGAMLPISQVANVSLLDARTISVQ 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            W+K M A +E+ I +S+LGLNP   G ++R+P+P  +EERR  L KV     E +KI++
Sbjct: 70  PWEKGMGAKIEKAIRDSDLGLNPSSMGDLIRVPMPAMSEERRKELSKVVRGEGEGAKIAI 129

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RN+RRD  + ++K+ K   ASED     E DIQK+TD  +  ID     K+++IM
Sbjct: 130 RNLRRDANEAIRKAVKDKLASEDEQKRCETDIQKVTDRHVIVIDQLVAAKEQDIM 184


>gi|299141583|ref|ZP_07034719.1| ribosome recycling factor [Prevotella oris C735]
 gi|298576919|gb|EFI48789.1| ribosome recycling factor [Prevotella oris C735]
          Length = 186

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 115/178 (64%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM     +L  ++  +R GR + ++LD VKV++YGS VPLNQVA V+  + R +
Sbjct: 8   LSDAQERMEMAAMYLADELTHIRAGRANTAILDGVKVDSYGSKVPLNQVATVSTPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+V+R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIRPWDKKAIKDIEKAIMDSDVGITPENNGEVIRLGIPQPTEERRKELVKQCNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VRN+R +  D LKK+ K G  SED+    END+QK+ D  IK ID    EK+KEIM
Sbjct: 128 VEVRNVRGEVKDKLKKAIKDG-LSEDLEKDAENDLQKVHDKFIKKIDELLTEKQKEIM 184


>gi|229552426|ref|ZP_04441151.1| ribosome recycling factor [Lactobacillus rhamnosus LMS2-1]
 gi|258539797|ref|YP_003174296.1| ribosome recycling factor [Lactobacillus rhamnosus Lc 705]
 gi|229314163|gb|EEN80136.1| ribosome recycling factor [Lactobacillus rhamnosus LMS2-1]
 gi|257151473|emb|CAR90445.1| Ribosome-recycling factor [Lactobacillus rhamnosus Lc 705]
          Length = 185

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 117/184 (63%), Gaps = 2/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQ+I+   +   MG T   L++++  +R GR + S+L+ + V+ YG+  PLNQ+A +TV 
Sbjct: 3   NQIIEQAKVN--MGKTEESLQRELGNIRAGRANASLLNQITVDYYGAPTPLNQMAAITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L +S +DK  + ++E  I+ S+LG+NP  +G V+R+ +P+ T ERR  + K    +
Sbjct: 61  EARVLQISPYDKSSLKNIETAINASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKF 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +E +KI++RNIRR+G+D LK+  K G  +ED +  LE D+QK TD   K ID     K+K
Sbjct: 121 SENAKIAIRNIRREGLDKLKRQEKDGDITEDELHRLEKDMQKATDDATKRIDEIAAAKEK 180

Query: 182 EIMH 185
           EI  
Sbjct: 181 EITE 184


>gi|257094441|ref|YP_003168082.1| ribosome recycling factor [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046965|gb|ACV36153.1| ribosome recycling factor [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 186

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 77/182 (42%), Positives = 115/182 (63%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKDR-MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + DL+   +R M  ++  L+ D+  +RTGR    +LD V+VE YGS VP+N VANVT+++
Sbjct: 3   LADLKKTTERKMEKSLEALRTDLAKVRTGRAHTGLLDHVQVEYYGSLVPINTVANVTLID 62

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R L V  W+K M   VE+ I + +LGLNP  +G+++R+P+P  TE RR  L+KV  A A
Sbjct: 63  ARTLGVQPWEKGMAGKVEKAIRDCDLGLNPASQGELIRVPMPPLTEARRRDLIKVVRAEA 122

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E +K++VRN+RRD    LK+  K+   SED     +++IQK+TD  +  ID     K+ E
Sbjct: 123 EGAKVAVRNLRRDANATLKEMLKNKACSEDEEHRAQDEIQKLTDRYVVEIDKQLSHKETE 182

Query: 183 IM 184
           +M
Sbjct: 183 LM 184


>gi|317406265|gb|EFV86509.1| frr protein [Achromobacter xylosoxidans C54]
          Length = 186

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 113/172 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  LK ++  +RTGR    +LD V+VE YGS VP++QV NV +++ R + V  ++
Sbjct: 13  RMAKSLDTLKTNLAKIRTGRAHTGILDHVQVEYYGSPVPISQVGNVNLIDARTISVQPYE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M A++E+ I ES+LGLNP+  G  +R+P+P  TEERR  L KV  +  E +K++VRN+
Sbjct: 73  KSMAAAIEKAIRESDLGLNPMSMGDSIRVPMPALTEERRRDLTKVVRSEGEDAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+  + LKK  K  + SED     ++D+QK+TD ++ +ID    +K+ EIM
Sbjct: 133 RREANEGLKKLVKDKEISEDDERRAQDDVQKLTDRSVADIDKMVTQKEAEIM 184


>gi|237739392|ref|ZP_04569873.1| ribosome recycling factor [Fusobacterium sp. 2_1_31]
 gi|229423000|gb|EEO38047.1| ribosome recycling factor [Fusobacterium sp. 2_1_31]
          Length = 190

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 115/179 (64%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D+M  TI  +K+   ++R GR + +MLD VKVE YGS VPLNQV +V+  E R+L
Sbjct: 9   VKECEDKMLKTIESVKERFTSIRAGRANVAMLDAVKVENYGSEVPLNQVGSVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WDK ++  +E+ +  +NLG+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VVDPWDKTLIPKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKK--SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK    K    SED +   E ++Q +TD  IK ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEEANVQTLTDKYIKEIDELLAKKEKEI 187


>gi|42520392|ref|NP_966307.1| ribosome recycling factor [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|47116999|sp|P61311|RRF_WOLPM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|42410130|gb|AAS14241.1| ribosome recycling factor [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 185

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 112/175 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+RM  TI     D+  +RTGR S S+LD + V  YG H  LNQVA V+V++ + L + V
Sbjct: 10  KERMLKTIQSFHDDIKGVRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVIDNKTLSIKV 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD  +V  V+  I  +NL LNP+VEG  +RI +P+ T+E R  LVK+ H +AE ++I++R
Sbjct: 70  WDISVVGEVKNAILNANLNLNPVVEGSTIRIALPDLTQETREKLVKLLHQFAENARIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD M+  +K +++ + SED     + +IQ ITD  IK ID     K+K+I++
Sbjct: 130 NIRRDIMEETEKMKENKEISEDDFHGAKKEIQNITDDNIKKIDGELSIKEKDILN 184


>gi|332799211|ref|YP_004460710.1| Ribosome-recycling factor [Tepidanaerobacter sp. Re1]
 gi|332696946|gb|AEE91403.1| Ribosome-recycling factor [Tepidanaerobacter sp. Re1]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 120/176 (68%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++++M + +  LK +  T+R GR S ++LD + V+ YGS  P+NQVA+V+V EP+M+++ 
Sbjct: 9   MENQMNEVLVNLKSEFTTIRAGRASAALLDKIYVDYYGSPTPVNQVASVSVPEPKMILIQ 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WD +M+  +E+ I +S+LGL P  +G+V+R+ +PE T ERR  LVK++   AE++K+S+
Sbjct: 69  PWDLKMLGVIEKAILKSDLGLTPNNDGKVIRLILPELTAERRQELVKLSKKKAEEAKVSI 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RNIRR+  D LKK  K+ + SED +   + +IQKITD  I  ++     K+K+IM 
Sbjct: 129 RNIRREYNDVLKKMEKNREISEDDLKRSQEEIQKITDKYIDEVEKILANKEKDIME 184


>gi|315641203|ref|ZP_07896280.1| ribosome recycling factor [Enterococcus italicus DSM 15952]
 gi|315482970|gb|EFU73489.1| ribosome recycling factor [Enterococcus italicus DSM 15952]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  IK +M  T   L++++  +R GR + S+LD + V  YG+  P+NQ+A++T+ E R+L
Sbjct: 6   LNEIKTKMEKTAENLQRELGQIRAGRANASLLDRISVVYYGAPTPINQLASITIPEARIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+ I  S++G+NP  +G V+R+ +P+ TEERR  LVK      E +K
Sbjct: 66  MITPFDKSTLKDIEKAILASDIGINPTSDGNVIRLVIPQLTEERRKELVKEVKKETESAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RN RRDGMD  KK +K+G  +ED + + E  IQ++TD++IK +D     K++E++ 
Sbjct: 126 IAIRNARRDGMDSYKKQQKAGDITEDDLRTSEKTIQELTDASIKELDKIAASKEEELLE 184


>gi|253999117|ref|YP_003051180.1| ribosome recycling factor [Methylovorus sp. SIP3-4]
 gi|313201218|ref|YP_004039876.1| ribosome recycling factor [Methylovorus sp. MP688]
 gi|253985796|gb|ACT50653.1| ribosome recycling factor [Methylovorus sp. SIP3-4]
 gi|312440534|gb|ADQ84640.1| ribosome recycling factor [Methylovorus sp. MP688]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  ++  LK D+  +RTGR    +LD V VE YGS V +NQVANVT+ + R + 
Sbjct: 7   KNAEQKMQKSLESLKSDLGKVRTGRAHTGLLDHVMVEYYGSMVAVNQVANVTLGDARTIN 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K MVA +E+ I + +LGLNP   G V+R+P+P  TEERR  L+KV     E +K+
Sbjct: 67  VQPYEKNMVAKIEKAIRDGDLGLNPATNGDVIRVPMPMLTEERRRDLIKVVRTEGENAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  D LKK  K  + SED    +++++QK+TD  +  +D   + K+ ++M
Sbjct: 127 AIRNVRRDANDQLKKLTKDKEISEDDERRMQDEVQKLTDRFVAEVDKLLQVKEADLM 183


>gi|255283877|ref|ZP_05348432.1| ribosome recycling factor [Bryantella formatexigens DSM 14469]
 gi|255265598|gb|EET58803.1| ribosome recycling factor [Bryantella formatexigens DSM 14469]
          Length = 183

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 77/173 (44%), Positives = 108/173 (62%), Gaps = 1/173 (0%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  T + L  +   +R GR +P +LD + V+ YG+  P+ QV NV V E RM+ +  W
Sbjct: 10  EKMTKTYNNLLAEFGAIRAGRANPHVLDRIMVDYYGTPTPIQQVGNVNVPEARMIQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D  M+ ++ + I  S+LG+NP  +G+V+R+  PE TEERR  LVK      E +K++VRN
Sbjct: 70  DTSMLKAITKAIQTSDLGINPTNDGRVIRLVFPELTEERRKDLVKEVKKKGEGAKVAVRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRD  D  KK  K    SED +  LEN +QK+TD  +K+IDS  EEK KEIM
Sbjct: 130 IRRDANDAFKKL-KGTDVSEDTIKELENAMQKLTDKYMKDIDSAVEEKSKEIM 181


>gi|301059177|ref|ZP_07200117.1| ribosome recycling factor [delta proteobacterium NaphS2]
 gi|300446725|gb|EFK10550.1| ribosome recycling factor [delta proteobacterium NaphS2]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++ +M   +  LKKD   +RTGR S ++LD +KV+ Y + +P++QVA +   E R++
Sbjct: 6   LAELRQKMNKAVEALKKDFRKIRTGRASTALLDGIKVDCYDTQMPIDQVATIAAPESRLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+ ++ ++E+ I +S LGL P+ +G+++RI +P  TEERR  L K+A   AE +K
Sbjct: 66  TIQPWDQSIMGNLEKSILKSELGLTPMNDGKMIRISIPPLTEERRKELAKLARKMAEDNK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RN RR+  D  K+ +   + SED +   ++D+QKITD  I+ +D    +K++EI+ F
Sbjct: 126 ISIRNFRREANDMFKELKAEKEISEDELFKSQDDVQKITDEFIQKVDETTAKKEQEIIEF 185


>gi|225018404|ref|ZP_03707596.1| hypothetical protein CLOSTMETH_02351 [Clostridium methylpentosum
           DSM 5476]
 gi|224948822|gb|EEG30031.1| hypothetical protein CLOSTMETH_02351 [Clostridium methylpentosum
           DSM 5476]
          Length = 184

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +M  T+  L+ +  T+R GR +P++LD + V+ YG+   +NQ+A V+V E R+L
Sbjct: 5   LEKSESKMHKTVERLEHEYTTIRAGRANPNVLDKILVDYYGTPTQINQMAAVSVSEARIL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S WD   + ++E+ I  S+LG+NP  +G+V+RI  P+ TEERR  +VK  H   E +K
Sbjct: 65  VISPWDATSLKAIEKAIQASDLGINPTNDGKVIRIAFPQLTEERRKEIVKEVHKMREDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  K  +K G  SED +   E  +Q + D   K ID+    K+KEIM  
Sbjct: 125 VAVRNIRRDAMDKFKAIKKEGSVSEDEIKDGEKKLQNMVDKFCKEIDNVAAGKEKEIMEI 184


>gi|117622457|ref|YP_851370.1| ribosome recycling factor [Escherichia coli APEC O1]
 gi|309787154|ref|ZP_07681766.1| ribosome recycling factor [Shigella dysenteriae 1617]
 gi|115511581|gb|ABI99655.1| ribosome releasing factor [Escherichia coli APEC O1]
 gi|308924732|gb|EFP70227.1| ribosome recycling factor [Shigella dysenteriae 1617]
 gi|332097962|gb|EGJ02935.1| ribosome recycling factor [Shigella dysenteriae 155-74]
          Length = 173

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 111/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D+
Sbjct: 1   MDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+R
Sbjct: 61  SMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SED     ++D+QK+TD+ IK I++   +K+ E+M F
Sbjct: 121 RDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF 173


>gi|154500382|ref|ZP_02038420.1| hypothetical protein BACCAP_04049 [Bacteroides capillosus ATCC
           29799]
 gi|150270887|gb|EDM98170.1| hypothetical protein BACCAP_04049 [Bacteroides capillosus ATCC
           29799]
          Length = 184

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 106/172 (61%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  T+  +K D  ++R GR + ++LD + V+ YG   PLNQV  ++  +PR LV+  WD
Sbjct: 11  KMQKTVDVVKSDFASVRAGRANAAVLDKITVDYYGVPTPLNQVGGISSPDPRSLVIQPWD 70

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            +++  +E+ I  S+LG+NP  +G+V+R+  P+ TEERR  L K    YAE  K+++RNI
Sbjct: 71  TKLLKDIEKAIQTSDLGINPQNDGRVIRLNFPQLTEERRKDLTKQVRKYAEAGKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD MD  K   K  + +ED    LE ++Q +TD   K ID   E+K+ E+M
Sbjct: 131 RRDAMDKFKAMEKKSEITEDDRKELEKELQDLTDKRCKQIDELTEKKEAELM 182


>gi|153954045|ref|YP_001394810.1| ribosome recycling factor [Clostridium kluyveri DSM 555]
 gi|219854658|ref|YP_002471780.1| hypothetical protein CKR_1315 [Clostridium kluyveri NBRC 12016]
 gi|189044051|sp|A5N831|RRF_CLOK5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809504|sp|B9E1J1|RRF_CLOK1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146346926|gb|EDK33462.1| Frr [Clostridium kluyveri DSM 555]
 gi|219568382|dbj|BAH06366.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  T+  L K++ +++ GR +P++LD ++VE YG+  P++Q+A +++ E R+L
Sbjct: 6   LNKADEKMNKTVDVLVKELASMKAGRANPAILDKIEVEYYGAMTPISQLAGISIPEARIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  + S+E+ I +S+LG+NP  +G+++R+ +PE TEE R  +VK      E SK
Sbjct: 66  AIQPWDKSALKSIEKAILKSDLGINPSNDGEIIRLIIPELTEETRKNIVKNIKKTGEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R IRR+  D  K  +K    SED +   E  IQK TD  IKNID+  E+K+KEIM  
Sbjct: 126 VAIRGIRRECNDKFKALKKKNDISEDEIKKGEEQIQKKTDIFIKNIDAILEKKEKEIMSL 185


>gi|310828069|ref|YP_003960426.1| ribosome recycling factor [Eubacterium limosum KIST612]
 gi|308739803|gb|ADO37463.1| ribosome recycling factor [Eubacterium limosum KIST612]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 118/184 (64%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ D  N  D+M   ++ L + +  LR GR +P +LD V V+ YG+   +NQ+A+V V
Sbjct: 2   LNEIKDRAN--DKMQKALNNLNESLGGLRAGRANPHILDKVTVDYYGAATAINQLASVAV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  +D   ++++E+ I  ++LG NP  +G+++R+ VPE TEERR  LVK+   
Sbjct: 60  PEARMITIQPYDSTSISAIEKAILTADLGFNPSNDGKIIRLIVPELTEERRKELVKLTKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E+ K+++RNIRR  +  LK + K G  SED +   E +IQK+TD  +KNI+   +EK+
Sbjct: 120 YGEECKVAMRNIRRKAVQDLKDAEKEGLISEDELHQGEKEIQKLTDDEVKNIEGVLKEKE 179

Query: 181 KEIM 184
            EIM
Sbjct: 180 AEIM 183


>gi|261378087|ref|ZP_05982660.1| ribosome recycling factor [Neisseria cinerea ATCC 14685]
 gi|269145536|gb|EEZ71954.1| ribosome recycling factor [Neisseria cinerea ATCC 14685]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 116/182 (63%), Gaps = 1/182 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R
Sbjct: 4   DIQKTAESKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV  + AE+
Sbjct: 64  TIGVKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRSEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLM 183

Query: 185 HF 186
             
Sbjct: 184 AI 185


>gi|171780175|ref|ZP_02921079.1| hypothetical protein STRINF_01963 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281523|gb|EDT46958.1| hypothetical protein STRINF_01963 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   + S L ++   +R GR + S+LD ++VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFEQSHSSLAREFAAIRAGRANASLLDRIQVEYYGAMTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +E  I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSLKDIEHAINASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD MD  KK  K+ + +ED +  LE DIQK TD  +K+ID+    K+KE++ 
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKVLEKDIQKATDEAVKHIDAMTANKEKELLE 184


>gi|325197474|gb|ADY92930.1| ribosome recycling factor [Neisseria meningitidis G2136]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 115/182 (63%), Gaps = 1/182 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R
Sbjct: 4   DIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLM 183

Query: 185 HF 186
             
Sbjct: 184 AI 185


>gi|306825442|ref|ZP_07458782.1| ribosome recycling factor [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432380|gb|EFM35356.1| ribosome recycling factor [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++ 
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLE 184


>gi|150009958|ref|YP_001304701.1| ribosome recycling factor [Parabacteroides distasonis ATCC 8503]
 gi|255012780|ref|ZP_05284906.1| ribosome recycling factor [Bacteroides sp. 2_1_7]
 gi|256838752|ref|ZP_05544262.1| ribosome recycling factor [Parabacteroides sp. D13]
 gi|262382735|ref|ZP_06075872.1| ribosome recycling factor [Bacteroides sp. 2_1_33B]
 gi|298374315|ref|ZP_06984273.1| ribosome recycling factor [Bacteroides sp. 3_1_19]
 gi|301307843|ref|ZP_07213799.1| ribosome recycling factor [Bacteroides sp. 20_3]
 gi|190360244|sp|A6LHB5|RRF_PARD8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149938382|gb|ABR45079.1| ribosome recycling factor [Parabacteroides distasonis ATCC 8503]
 gi|256739671|gb|EEU52995.1| ribosome recycling factor [Parabacteroides sp. D13]
 gi|262295613|gb|EEY83544.1| ribosome recycling factor [Bacteroides sp. 2_1_33B]
 gi|298268683|gb|EFI10338.1| ribosome recycling factor [Bacteroides sp. 3_1_19]
 gi|300834186|gb|EFK64800.1| ribosome recycling factor [Bacteroides sp. 20_3]
          Length = 187

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 112/174 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   I +L + +  +R G+ +P +LD VKV  YG+ VPL  VA VTV + R ++++ 
Sbjct: 12  EEKMTFAIEYLDEQLSHIRAGKANPKILDCVKVMYYGAPVPLTNVATVTVPDARTIMITP 71

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K+++  +E+GI +S LG+ P   G+V+R+ +P  TEERR  LVK     AE +KISVR
Sbjct: 72  WEKKIIRDIEKGILDSELGITPENNGEVIRLGIPPLTEERRRQLVKQCKQEAENAKISVR 131

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N RRD ++ LKKS KS    ED+    E ++QKI D  IK ID  +  K+KE+M
Sbjct: 132 NARRDAIEALKKSIKSDGVPEDVEKDAEAEVQKIHDKFIKKIDELYAAKEKEVM 185


>gi|302525191|ref|ZP_07277533.1| ribosome recycling factor [Streptomyces sp. AA4]
 gi|302434086|gb|EFL05902.1| ribosome recycling factor [Streptomyces sp. AA4]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  K+D+ ++RTGR  PSM   + VE YG+  PLNQ+A+V V E RM 
Sbjct: 6   LLDAEEKMEKAVSVAKEDLTSVRTGRAHPSMFSRIVVEYYGAPTPLNQLASVNVPEARMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  + ++E+ I ES+LG+NP  +G V+RI +P+ TEERR  +VKVA    E ++
Sbjct: 66  LIKPYDQTQLNAIEKAIRESDLGVNPSNDGNVIRIVIPQLTEERRKEMVKVAKGKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R+IRR   + L +  K G+A ED VA  E ++Q +TD+ +  +D   + K+ E++ 
Sbjct: 126 VSIRSIRRKAKEELDRIAKDGEAGEDEVARAEKELQNLTDTYVHQVDELVKHKEAELLE 184


>gi|15902890|ref|NP_358440.1| ribosome recycling factor [Streptococcus pneumoniae R6]
 gi|116516857|ref|YP_816318.1| ribosome recycling factor [Streptococcus pneumoniae D39]
 gi|32171542|sp|Q8DQ49|RRF_STRR6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122278796|sp|Q04KY0|RRF_STRP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|15458449|gb|AAK99650.1| Ribosome recycling factor [Streptococcus pneumoniae R6]
 gi|116077433|gb|ABJ55153.1| ribosome recycling factor [Streptococcus pneumoniae D39]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 117/185 (63%), Gaps = 1/185 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  VI ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+
Sbjct: 1   MANVI-IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+V+ +DK  +  ++R ++ S+LG+ P  +G V+R+ +P  TEE R  L K    
Sbjct: 60  PEARVLLVTPFDKSSLKDIDRALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+
Sbjct: 120 VGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKE 179

Query: 181 KEIMH 185
           KE++ 
Sbjct: 180 KELLE 184


>gi|225677380|ref|ZP_03788350.1| ribosome releasing factor [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590588|gb|EEH11845.1| ribosome releasing factor [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 112/175 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+RM  TI     D+  +RTGR S S+LD + V  YG H  LNQVA V+V++ + L + +
Sbjct: 10  KERMLKTIQSFHDDIKGVRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVIDNKTLSIKI 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD  +V  V+  I  +NL LNP+VEG  +RI +P+ T+E R  LVK+ H +AE ++I++R
Sbjct: 70  WDINVVGEVKNAILNANLNLNPVVEGNTIRIALPDLTQETREKLVKLLHQFAENARIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD M+  +K +++ + SED     + +IQ ITD  IK ID     K+K+I++
Sbjct: 130 NIRRDIMEETEKMKENKEISEDDFHGAKKEIQNITDDNIKKIDGELSIKEKDILN 184


>gi|194468465|ref|ZP_03074451.1| ribosome recycling factor [Lactobacillus reuteri 100-23]
 gi|194453318|gb|EDX42216.1| ribosome recycling factor [Lactobacillus reuteri 100-23]
          Length = 187

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  +   L++ +  +R G+ + S+L+ VKVE YG+  PLNQVA++T+ E R L
Sbjct: 8   LNDAKQKMAKSGDALQRTLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+ ++  +E+ I+ SNLGL P  +G  +R+ +P+ TE+RR  LVK   A  EK+K
Sbjct: 68  LITPYDESVLEEIEKAIYASNLGLTPQNDGSSIRLIIPQLTEDRRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K+G  ++D    LE  +Q  TD+ IKN++     K+KE+M 
Sbjct: 128 VAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKKVQNETDAGIKNLEDIASAKEKELME 186


>gi|171059528|ref|YP_001791877.1| ribosome recycling factor [Leptothrix cholodnii SP-6]
 gi|238689083|sp|B1XXJ2|RRF_LEPCP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|170776973|gb|ACB35112.1| ribosome recycling factor [Leptothrix cholodnii SP-6]
          Length = 186

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 109/177 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  ++   K ++  +RTGR  P +LD V V+ YGS++PL+QVANVT+++ R + 
Sbjct: 8   KNAEAKMAKSVEAFKNELQKIRTGRAHPGILDQVHVDYYGSNLPLSQVANVTLIDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M   +E+ I ES+LGLNP   G ++R+P+P  TEERR  L KV     E SK+
Sbjct: 68  VQPWEKSMAQKIEKAIRESDLGLNPSSMGDLIRVPMPALTEERRKELTKVVRHAGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  D  KK  K    SED      +++QK+TD  I  ID     K+ EI+
Sbjct: 128 AVRNLRRDANDQAKKLLKDKLISEDDERRSVDEVQKLTDRVIAEIDRLVHGKEAEIL 184


>gi|257869600|ref|ZP_05649253.1| ribosome recycling factor [Enterococcus gallinarum EG2]
 gi|257803764|gb|EEV32586.1| ribosome recycling factor [Enterococcus gallinarum EG2]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KD+M      L++++  +R GR + S+LD V V  YG   PLNQ+A++T+ E R+L
Sbjct: 6   LTEAKDKMKKAAENLQRELGQIRAGRANASILDRVMVTYYGVPTPLNQMASITIPEARIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK M+  VE+ I +S++G+ P  +G V+R+ +P+ TEERR  L K     AE +K
Sbjct: 66  MITPFDKTMIQEVEKAIMQSDIGITPANDGTVIRLVIPQLTEERRKELAKDVKKEAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD MD  KK  KSG  + D +   E ++Q +TD++IK ID    EK++E++  
Sbjct: 126 IAVRNIRRDAMDAYKKQEKSGDITVDDLRESEKEVQTLTDNSIKEIDQIAAEKEQELLEV 185


>gi|260588561|ref|ZP_05854474.1| ribosome recycling factor [Blautia hansenii DSM 20583]
 gi|331082136|ref|ZP_08331264.1| ribosome recycling factor [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260541036|gb|EEX21605.1| ribosome recycling factor [Blautia hansenii DSM 20583]
 gi|330405731|gb|EGG85261.1| ribosome recycling factor [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 185

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 112/178 (62%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +M  T+  L K+++T+R GR +P +LD + V+ YG+  PL QVAN+TV E RM+
Sbjct: 7   IQVYEHKMTKTLEGLTKELVTIRAGRANPHILDKLTVDYYGTPTPLQQVANITVPEARMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++  + + I  S+L LNP  +G+++R+ +PE TEERR  LVK      E +K
Sbjct: 67  QIQPWEASLIKEISKAILSSDLNLNPNSDGKIIRLVLPELTEERRKELVKDVKKKGEAAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RRD  D  KK  K    SED +  LE  IQKITD  +K I+   EEK KEI+
Sbjct: 127 VAVRNVRRDANDAFKKLAKQD-VSEDEIKELEEQIQKITDKFVKEIEKAVEEKSKEIL 183


>gi|319793980|ref|YP_004155620.1| ribosome recycling factor [Variovorax paradoxus EPS]
 gi|315596443|gb|ADU37509.1| ribosome recycling factor [Variovorax paradoxus EPS]
          Length = 186

 Score =  148 bits (374), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 115/182 (63%), Gaps = 1/182 (0%)

Query: 4   VIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + D+++  D +M  +++  + ++  +RTGR + ++LD + VE YGS VPL+QVANV+VL+
Sbjct: 3   IADIRSATDAKMNQSLAAFQNNLTKIRTGRANSALLDSIHVEYYGSQVPLSQVANVSVLD 62

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R + V  W+K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+     
Sbjct: 63  SRTISVQPWEKGMGAKIEKAIRESDLGLNPASMGDLIRVPLPAMSEERRKEMTKLVRNEG 122

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E +K++ RN+RRD  + +KK  K   ASED     E +IQK+TD  I  ID     K+ E
Sbjct: 123 ETAKVATRNLRRDANESVKKLVKDKLASEDDQKRAEAEIQKVTDRHIAEIDRLVAAKEAE 182

Query: 183 IM 184
           IM
Sbjct: 183 IM 184


>gi|326204054|ref|ZP_08193915.1| ribosome recycling factor [Clostridium papyrosolvens DSM 2782]
 gi|325985821|gb|EGD46656.1| ribosome recycling factor [Clostridium papyrosolvens DSM 2782]
          Length = 185

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 118/176 (67%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           I+++M  TI+ LK ++  +R GR +P++LD + ++ YG+  P+ Q+A V+V E R++++ 
Sbjct: 9   IEEKMKKTINVLKDNLAGIRAGRANPAILDKLTIDYYGAATPIQQIATVSVPEARVILIQ 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            W+ +++  +E+ I +S++G+NP  +G+V+R+  P  TEERR  L K A    E+SK+++
Sbjct: 69  PWEAKLLKDIEKEIQKSDIGINPNNDGKVIRLVFPALTEERRKELTKQAKKEGEESKVAI 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R+IRRD ++ +K  +K+G+ +ED +   E DIQ +TD  I +ID   E K KEIM 
Sbjct: 129 RSIRRDSIEGMKSKKKNGEITEDDLKDAEKDIQNLTDRYIADIDKIIEAKDKEIME 184


>gi|281425442|ref|ZP_06256355.1| ribosome recycling factor [Prevotella oris F0302]
 gi|281400435|gb|EFB31266.1| ribosome recycling factor [Prevotella oris F0302]
          Length = 186

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 115/178 (64%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM     +L  ++  +R GR + ++LD VKV++YGS VPLNQVA V+  + R +
Sbjct: 8   LSDAQERMEMAAMYLADELTHIRAGRANTAILDGVKVDSYGSKVPLNQVATVSTPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+V+R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIRPWDKKAIKDIEKAIMDSDVGITPENNGEVIRLGIPQPTEERRKELVKQCNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VRN+R +  D LKK+ K G  SED+    END+QK+ D  IK ID    EK+KEIM
Sbjct: 128 VEVRNVRGEVKDKLKKAIKEG-LSEDLEKDAENDLQKVHDKFIKRIDELLTEKQKEIM 184


>gi|15900824|ref|NP_345428.1| ribosome recycling factor [Streptococcus pneumoniae TIGR4]
 gi|111658056|ref|ZP_01408758.1| hypothetical protein SpneT_02000789 [Streptococcus pneumoniae
           TIGR4]
 gi|182683889|ref|YP_001835636.1| ribosome releasing factor [Streptococcus pneumoniae CGSP14]
 gi|303254412|ref|ZP_07340518.1| ribosome recycling factor [Streptococcus pneumoniae BS455]
 gi|303259855|ref|ZP_07345830.1| ribosome releasing factor [Streptococcus pneumoniae SP-BS293]
 gi|303262269|ref|ZP_07348213.1| ribosome releasing factor [Streptococcus pneumoniae SP14-BS292]
 gi|303264691|ref|ZP_07350609.1| ribosome releasing factor [Streptococcus pneumoniae BS397]
 gi|303267220|ref|ZP_07353085.1| ribosome releasing factor [Streptococcus pneumoniae BS457]
 gi|303269506|ref|ZP_07355271.1| ribosome releasing factor [Streptococcus pneumoniae BS458]
 gi|22001947|sp|Q97R82|RRF_STRPN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238691154|sp|B2IPA0|RRF_STRPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|14972420|gb|AAK75068.1| ribosome recycling factor [Streptococcus pneumoniae TIGR4]
 gi|182629223|gb|ACB90171.1| ribosome releasing factor [Streptococcus pneumoniae CGSP14]
 gi|302598579|gb|EFL65619.1| ribosome recycling factor [Streptococcus pneumoniae BS455]
 gi|302636592|gb|EFL67083.1| ribosome releasing factor [Streptococcus pneumoniae SP14-BS292]
 gi|302639060|gb|EFL69520.1| ribosome releasing factor [Streptococcus pneumoniae SP-BS293]
 gi|302640942|gb|EFL71324.1| ribosome releasing factor [Streptococcus pneumoniae BS458]
 gi|302643229|gb|EFL73511.1| ribosome releasing factor [Streptococcus pneumoniae BS457]
 gi|302645778|gb|EFL76007.1| ribosome releasing factor [Streptococcus pneumoniae BS397]
          Length = 185

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S++G+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDIGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++ 
Sbjct: 126 VAVRNIRRDAMDEAKKREKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLE 184


>gi|227544958|ref|ZP_03975007.1| ribosome recycling factor [Lactobacillus reuteri CF48-3A]
 gi|300910011|ref|ZP_07127471.1| ribosome recycling factor [Lactobacillus reuteri SD2112]
 gi|227185069|gb|EEI65140.1| ribosome recycling factor [Lactobacillus reuteri CF48-3A]
 gi|300892659|gb|EFK86019.1| ribosome recycling factor [Lactobacillus reuteri SD2112]
          Length = 187

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  +   L++ +  +R G+ + S+L+ VKVE YG+  PLNQVA++T+ E R L
Sbjct: 8   LNDAKQKMAKSGDALQRTLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+ ++  +E+ I+ SNLGL P  +G  +R+ +P+ TE+RR  LVK   A  EK+K
Sbjct: 68  LITPYDESVLEEIEKAIYASNLGLTPQNDGSSIRLIIPQLTEDRRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K+G  ++D    LE  +Q  TD+ IKN++     K+KE+M 
Sbjct: 128 VAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKKVQNETDAGIKNLEDIANTKEKELME 186


>gi|257867709|ref|ZP_05647362.1| ribosome recycling factor [Enterococcus casseliflavus EC30]
 gi|257874036|ref|ZP_05653689.1| ribosome recycling factor [Enterococcus casseliflavus EC10]
 gi|257876615|ref|ZP_05656268.1| ribosome recycling factor [Enterococcus casseliflavus EC20]
 gi|325571087|ref|ZP_08146659.1| ribosome recycling factor [Enterococcus casseliflavus ATCC 12755]
 gi|257801792|gb|EEV30695.1| ribosome recycling factor [Enterococcus casseliflavus EC30]
 gi|257808200|gb|EEV37022.1| ribosome recycling factor [Enterococcus casseliflavus EC10]
 gi|257810781|gb|EEV39601.1| ribosome recycling factor [Enterococcus casseliflavus EC20]
 gi|325156172|gb|EGC68358.1| ribosome recycling factor [Enterococcus casseliflavus ATCC 12755]
          Length = 185

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KD+M      L++++  +R GR + S+LD V V  YG   PLNQ+A++T+ E R+L
Sbjct: 6   LTEAKDKMKKAAENLQRELGQIRAGRANASILDRVMVTYYGVPTPLNQMASITIPEARIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK M+  VE+ I +S++G+ P  +G V+R+ +P+ TEERR  L K     AE +K
Sbjct: 66  MITPFDKTMIQEVEKAIMQSDIGITPANDGTVIRLVIPQLTEERRKELAKDVKKEAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD M+  KK  K+G  +ED +   E ++Q  TD++IK ID+   EK++E++  
Sbjct: 126 IAVRNIRRDAMEAYKKQEKAGDITEDDLRESEKEVQTATDNSIKEIDAIAAEKEQELLEV 185


>gi|227833383|ref|YP_002835090.1| Ribosome recycling factor [Corynebacterium aurimucosum ATCC 700975]
 gi|262184370|ref|ZP_06043791.1| ribosome recycling factor [Corynebacterium aurimucosum ATCC 700975]
 gi|254809506|sp|C3PH48|RRF_CORA7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|227454399|gb|ACP33152.1| Ribosome recycling factor [Corynebacterium aurimucosum ATCC 700975]
          Length = 185

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 115/175 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++ M  ++   ++ ++T+RTGR +P+M + +  E YG   P+ Q+A ++V EPRML++  
Sbjct: 10  EEHMTASVEHTREQLLTIRTGRANPAMFNGLVAEYYGVPTPITQMATISVPEPRMLLIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +++ ++  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A +  E  KI++R
Sbjct: 70  YEQSVMNEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMVKMAKSKGEDGKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR  M+ LKK +K G A ED V + E +++KIT   I+ +D     K++E+M 
Sbjct: 130 NIRRRAMEQLKKLQKDGDAGEDEVIAAEKEMEKITSGYIEQVDKLVANKEEELME 184


>gi|259503115|ref|ZP_05746017.1| ribosome recycling factor [Lactobacillus antri DSM 16041]
 gi|259168981|gb|EEW53476.1| ribosome recycling factor [Lactobacillus antri DSM 16041]
          Length = 186

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  +   L++ +  +R G+ + S+L+ VKVE YG+  PLNQVA++T+ E R L
Sbjct: 8   LNDAKQKMKKSGEALQRSLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D+ ++  +E+ I+ SNLGL P  +G  +R+ +P+ TE+RR  LVK   A  EK+K
Sbjct: 68  LVTPYDESILEEIEKAIYASNLGLTPQNDGSAIRLIIPQLTEDRRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K+G  ++D    LE  +Q  TD+ IKN++     K+KE++ 
Sbjct: 128 VAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKQVQNETDAGIKNLEEIAGAKEKELLQ 186


>gi|239626444|ref|ZP_04669475.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516590|gb|EEQ56456.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 183

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 111/179 (62%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+  +D+M  T+  L  D  T+R GR +P +LD +KV+ YG+  PL QV NV+V E RM
Sbjct: 3   ELKIYEDKMNKTLDVLLSDFGTIRAGRANPHVLDKLKVDYYGTPTPLQQVGNVSVPEARM 62

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+  W+K ++  +E+ I  S LG+NP  +G  +R+  PE TE+RR  + K      E +
Sbjct: 63  IVIQPWEKSLLKPIEKAILTSELGINPTNDGNCIRLVFPEMTEDRRKEVSKDVKKKGEGA 122

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           K+++RNIRRD  +  KK+ K+G  SED +      +QK+TD  ++ +D   EEK KEIM
Sbjct: 123 KVALRNIRRDANEAFKKAEKAGDMSEDDLKEATEKMQKLTDKMVEKVDKAVEEKTKEIM 181


>gi|188586056|ref|YP_001917601.1| ribosome recycling factor [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229564261|sp|B2A383|RRF_NATTJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|179350743|gb|ACB85013.1| ribosome recycling factor [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 184

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 78/180 (43%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            ++ + +M   +S LK ++ +LR GR +PS+L+ + V+ YG   PLNQ+AN++  EPR+L
Sbjct: 5   FKDAEQKMKKALSSLKSELASLRAGRANPSILEGINVDYYGMATPLNQLANISAPEPRLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +DK  +  +E+ I +S++GL P  +GQV+R+ VP+ TEERR  LVK+     E +K
Sbjct: 65  VVQPYDKSAIEDIEKAILKSDVGLTPNNDGQVIRLAVPQLTEERRNELVKIVRQKGEDTK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+RRD  D LKK  K  + SED     +++IQKITD  IK ID     K++EI  F
Sbjct: 125 VVVRNVRRDANDELKKLEKEKEISEDESIRGQDEIQKITDKYIKKIDEVMNAKEEEITSF 184


>gi|74316806|ref|YP_314546.1| ribosome recycling factor [Thiobacillus denitrificans ATCC 25259]
 gi|123612166|sp|Q3SKN6|RRF_THIDA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|74056301|gb|AAZ96741.1| ribosome recycling factor [Thiobacillus denitrificans ATCC 25259]
          Length = 189

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + +MG T+  LK D+  +RTGR    +LD V V+ YG+  P+ QVANV++++ R L 
Sbjct: 11  QSAEQKMGKTLEALKNDLAKVRTGRAHAGILDHVLVDYYGNPTPVPQVANVSLVDSRTLG 70

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K MV  +E+ I + +LGLNP   G V+R+P+P  TEERR  L+KV    AE +++
Sbjct: 71  VQPYEKNMVGKIEKAIRDGDLGLNPATHGDVIRVPMPALTEERRRDLIKVVRNEAEGARV 130

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD    LK   K+  A+ED     ++++QK+TD  I  ID    EK+K+++
Sbjct: 131 AVRNIRRDANASLKDMVKAKTATEDEERRTQDEVQKLTDKFIGEIDKMLAEKEKDLL 187


>gi|15676114|ref|NP_273245.1| ribosome recycling factor [Neisseria meningitidis MC58]
 gi|121634062|ref|YP_974307.1| ribosome recycling factor [Neisseria meningitidis FAM18]
 gi|218767120|ref|YP_002341632.1| ribosome recycling factor [Neisseria meningitidis Z2491]
 gi|296313408|ref|ZP_06863349.1| ribosome recycling factor [Neisseria polysaccharea ATCC 43768]
 gi|54039296|sp|P66737|RRF_NEIMB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|54042004|sp|P66736|RRF_NEIMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230807|sp|A1KRL9|RRF_NEIMF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|7225406|gb|AAF40644.1| ribosome recycling factor [Neisseria meningitidis MC58]
 gi|120865768|emb|CAM09497.1| ribosome recycling factor [Neisseria meningitidis FAM18]
 gi|121051128|emb|CAM07399.1| ribosome recycling factor [Neisseria meningitidis Z2491]
 gi|261391723|emb|CAX49172.1| ribosome recycling factor (ribosome-releasing factor; RRF)
           [Neisseria meningitidis 8013]
 gi|296840119|gb|EFH24057.1| ribosome recycling factor [Neisseria polysaccharea ATCC 43768]
 gi|319411327|emb|CBY91738.1| ribosome recycling factor (ribosome-releasing factor; RRF)
           [Neisseria meningitidis WUE 2594]
 gi|325129106|gb|EGC51955.1| ribosome recycling factor [Neisseria meningitidis N1568]
 gi|325133101|gb|EGC55773.1| ribosome recycling factor [Neisseria meningitidis M6190]
 gi|325139079|gb|EGC61625.1| ribosome recycling factor [Neisseria meningitidis ES14902]
 gi|325141201|gb|EGC63701.1| ribosome recycling factor [Neisseria meningitidis CU385]
 gi|325145384|gb|EGC67661.1| ribosome recycling factor [Neisseria meningitidis M01-240013]
 gi|325199400|gb|ADY94855.1| ribosome recycling factor [Neisseria meningitidis H44/76]
 gi|325202978|gb|ADY98432.1| ribosome recycling factor [Neisseria meningitidis M01-240149]
 gi|325203308|gb|ADY98761.1| ribosome recycling factor [Neisseria meningitidis M01-240355]
 gi|325205280|gb|ADZ00733.1| ribosome recycling factor [Neisseria meningitidis M04-240196]
          Length = 185

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 115/182 (63%), Gaps = 1/182 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R
Sbjct: 4   DIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLM 183

Query: 185 HF 186
             
Sbjct: 184 AI 185


>gi|163856844|ref|YP_001631142.1| ribosome recycling factor [Bordetella petrii DSM 12804]
 gi|229564222|sp|A9INV3|RRF_BORPD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|163260572|emb|CAP42874.1| frr [Bordetella petrii]
          Length = 186

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  LK ++  +RTGR    +LD V+VE YGS VP++QVANV +++ R + V  ++
Sbjct: 13  RMAKSLDTLKVNLSKIRTGRAHTGILDHVQVEYYGSPVPVSQVANVNLVDARTISVQPYE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M A++E+ I ES+LGLNP+  G  +R+P+P  TEERR  L KV     E +KI+VRN+
Sbjct: 73  KPMAAAIEKAIRESDLGLNPMSLGDSIRVPMPALTEERRRDLTKVVKGEGEDAKIAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+  + LKK  K  + SED     ++DIQK+TD  +  ID    +K+ EIM
Sbjct: 133 RREANESLKKLVKDKEISEDDERRAQDDIQKLTDRNVTEIDKLITQKEAEIM 184


>gi|269837765|ref|YP_003319993.1| ribosome recycling factor [Sphaerobacter thermophilus DSM 20745]
 gi|269787028|gb|ACZ39171.1| ribosome recycling factor [Sphaerobacter thermophilus DSM 20745]
          Length = 185

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + RM  T+  L++++  +RTGR SP +++ ++V+ YG+  PLNQVA ++  EPR+L
Sbjct: 6   LADAEGRMTKTLDNLQRELAGIRTGRASPGLIERLEVDYYGTPTPLNQVAGISAPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD+  ++++E+ I  S+LGLNP  +GQV+RI +P  TEERR ALV+V     E+S+
Sbjct: 66  VVQPWDRSAMSAIEKAIRSSDLGLNPTNDGQVIRIAIPPLTEERRKALVRVVRQKVEESR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +  +K+  +     ED     E  +Q++T+  I   D   + K+ E++  
Sbjct: 126 VAIRNIRRDALAQVKEMLQEKLIGEDDERRAEQQVQELTNRYINEADKIGKNKEAEVLEV 185


>gi|227524388|ref|ZP_03954437.1| ribosome recycling factor [Lactobacillus hilgardii ATCC 8290]
 gi|227088619|gb|EEI23931.1| ribosome recycling factor [Lactobacillus hilgardii ATCC 8290]
          Length = 187

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K +M      L+ ++ ++R GR + S+L  V V+ YG+  PLNQ+A++++ E R++
Sbjct: 8   LNEAKTKMKKAQEVLEHELGSIRAGRANASLLSGVTVDYYGAPTPLNQIASISIPEARVI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + ++E+GI+E++LGL+P  +G  +R+ +P  TEERR  + K   A  EKSK
Sbjct: 68  LITPYDKSSLDNIEKGIYEADLGLSPANDGTAIRLAIPALTEERRREVAKQVKATGEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD  K+  KS + ++D +  LE+ +QK+TD++IK++D    +K+ E+M+
Sbjct: 128 VAVRNVRREAMDTFKRGNKSEEITDDELHRLEDQVQKLTDNSIKSVDKIVADKENEVMN 186


>gi|239815583|ref|YP_002944493.1| ribosome recycling factor [Variovorax paradoxus S110]
 gi|239802160|gb|ACS19227.1| ribosome recycling factor [Variovorax paradoxus S110]
          Length = 189

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 109/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +++  + ++  +RTGR + ++LD + VE YGS VPL+QVANV+VL+ R + V  W+
Sbjct: 16  KMNQSLAAFQNNLTKIRTGRANSALLDSIHVEYYGSQVPLSQVANVSVLDSRTISVQPWE 75

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+     E +KI+ RN+
Sbjct: 76  KGMGAKIEKAIRESDLGLNPASMGDLIRVPLPAMSEERRKEMTKLVRNEGESAKIATRNL 135

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + +KK  K   ASED     E +IQK+TD  I  ID     K+ EIM
Sbjct: 136 RRDANESVKKLVKEKLASEDDQKRAEAEIQKVTDRHIAEIDRLVAAKEAEIM 187


>gi|322385103|ref|ZP_08058750.1| ribosome recycling factor [Streptococcus cristatus ATCC 51100]
 gi|321270727|gb|EFX53640.1| ribosome recycling factor [Streptococcus cristatus ATCC 51100]
          Length = 185

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 114/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ++++T+ E R+L
Sbjct: 6   VEKAKERMTHSHQSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQLSSITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERAINASDLGITPSSDGSVIRLVIPALTEETRRELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K+ + +ED +  LE DIQK+TD  +K+ID     K+KE++
Sbjct: 126 IAIRNIRRDAMDEAKKQEKAKEITEDELKVLEKDIQKVTDDAVKHIDDMTATKEKELL 183


>gi|315038582|ref|YP_004032150.1| ribosome recycling factor [Lactobacillus amylovorus GRL 1112]
 gi|312276715|gb|ADQ59355.1| ribosome recycling factor [Lactobacillus amylovorus GRL 1112]
          Length = 185

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  ++ M  +I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQENMDKSIKVYQKKLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RRD M+ LK+  K G  +ED   +LE  +QK+TD   K ID   +EK+KEI  
Sbjct: 126 IAVRNVRRDAMNSLKREEKDGDITEDEQRNLEKQVQKVTDGAAKKIDQLADEKRKEITQ 184


>gi|325135114|gb|EGC57741.1| ribosome recycling factor [Neisseria meningitidis M13399]
 gi|325137020|gb|EGC59616.1| ribosome recycling factor [Neisseria meningitidis M0579]
          Length = 185

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 115/182 (63%), Gaps = 1/182 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R
Sbjct: 4   DIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTTKEEDLM 183

Query: 185 HF 186
             
Sbjct: 184 AI 185


>gi|227510244|ref|ZP_03940293.1| ribosome recycling factor [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227513173|ref|ZP_03943222.1| ribosome recycling factor [Lactobacillus buchneri ATCC 11577]
 gi|227083554|gb|EEI18866.1| ribosome recycling factor [Lactobacillus buchneri ATCC 11577]
 gi|227189896|gb|EEI69963.1| ribosome recycling factor [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 187

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K +M      L+ ++ ++R GR + S+L  V V+ YG+  PLNQ+A++++ E R++
Sbjct: 8   LNEAKTKMKKAQEVLEHELGSIRAGRANASLLSGVTVDYYGAPTPLNQIASISIPEARVI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + ++E+GI+E++LGL+P  +G  +R+ +P  TEERR  + K   A  EKSK
Sbjct: 68  LITPYDKSSLDNIEKGIYEADLGLSPANDGTAIRLAIPALTEERRKEVAKQVKATGEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD  K+  KS + ++D +  LE+ +QK+TD++IK++D    +K+ E+M+
Sbjct: 128 VAVRNVRREAMDTFKRGNKSEEITDDELHRLEDQVQKLTDNSIKSVDKIVADKENEVMN 186


>gi|21674395|ref|NP_662460.1| ribosome recycling factor [Chlorobium tepidum TLS]
 gi|25453262|sp|Q8KC49|RRF_CHLTE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21647576|gb|AAM72802.1| ribosome recycling factor [Chlorobium tepidum TLS]
          Length = 186

 Score =  148 bits (373), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 108/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q I+ RM  TI   + ++ ++RTG+ + ++LD VKVEAYGS +PL QV NV VL+   L
Sbjct: 7   IQKIEPRMKKTIEAFQHELASIRTGKATTALLDRVKVEAYGSQMPLKQVGNVGVLDAHTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWDK MV + ER I ++ LGLNP  +GQ +RI +P  TEERR   VK+   + E SK
Sbjct: 67  TVQVWDKSMVGATERAIRDAGLGLNPSADGQNIRISIPPLTEERRKEFVKLTKKFGEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN RRD +  ++K  K    SED +   + D   +     K I     +K+KEIM
Sbjct: 127 VSLRNHRRDLIHEVEKLEKEKLISEDELKRGKKDADDLLHKYEKQITELIAQKEKEIM 184


>gi|311105986|ref|YP_003978839.1| ribosome recycling factor [Achromobacter xylosoxidans A8]
 gi|310760675|gb|ADP16124.1| ribosome recycling factor [Achromobacter xylosoxidans A8]
          Length = 186

 Score =  147 bits (372), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 112/172 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  LK ++  +RTGR    +LD V+VE YGS VP++QV NV +++ R + V  ++
Sbjct: 13  RMAKSLDTLKTNLAKIRTGRAHTGILDHVQVEYYGSPVPISQVGNVNLVDARTISVQPYE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M A++E+ I ES+LGLNP+  G  +R+P+P  TEERR  L KV  +  E +K++VRN+
Sbjct: 73  KSMAAAIEKAIRESDLGLNPMSMGDTIRVPMPALTEERRRDLTKVVRSEGEDAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+  + LKK  K  + SED     ++D+QK+TD ++  ID    +K+ EIM
Sbjct: 133 RREANEALKKLVKDKEISEDDERRSQDDVQKLTDRSVAEIDKMVTQKEAEIM 184


>gi|293365195|ref|ZP_06611912.1| ribosome recycling factor [Streptococcus oralis ATCC 35037]
 gi|307703733|ref|ZP_07640674.1| ribosome recycling factor [Streptococcus oralis ATCC 35037]
 gi|291316645|gb|EFE57081.1| ribosome recycling factor [Streptococcus oralis ATCC 35037]
 gi|307622568|gb|EFO01564.1| ribosome recycling factor [Streptococcus oralis ATCC 35037]
          Length = 185

 Score =  147 bits (372), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D+  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDRSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++ 
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLE 184


>gi|148543919|ref|YP_001271289.1| ribosome recycling factor [Lactobacillus reuteri DSM 20016]
 gi|184153315|ref|YP_001841656.1| ribosome recycling factor [Lactobacillus reuteri JCM 1112]
 gi|227364829|ref|ZP_03848877.1| ribosome recycling factor [Lactobacillus reuteri MM2-3]
 gi|325682546|ref|ZP_08162063.1| ribosome recycling factor [Lactobacillus reuteri MM4-1A]
 gi|166991557|sp|A5VJC8|RRF_LACRD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229564260|sp|B2G6U4|RRF_LACRJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|148530953|gb|ABQ82952.1| ribosome recycling factor [Lactobacillus reuteri DSM 20016]
 gi|183224659|dbj|BAG25176.1| ribosome recycling factor [Lactobacillus reuteri JCM 1112]
 gi|227070173|gb|EEI08548.1| ribosome recycling factor [Lactobacillus reuteri MM2-3]
 gi|324978385|gb|EGC15335.1| ribosome recycling factor [Lactobacillus reuteri MM4-1A]
          Length = 187

 Score =  147 bits (372), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  +   L++ +  +R G+ + S+L+ VKVE YG+  PLNQVA++T+ E R L
Sbjct: 8   LNDAKQKMAKSGYALQRTLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+ ++  +E+ I+ SNLGL P  +G  +R+ +P+ TE+RR  LVK   A  EK+K
Sbjct: 68  LITPYDESVLEEIEKAIYASNLGLTPQNDGSSIRLIIPQLTEDRRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K+G  ++D    LE  +Q  TD+ IKN++     K+KE+M 
Sbjct: 128 VAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKKVQNETDAGIKNLEDIANAKEKELME 186


>gi|145589629|ref|YP_001156226.1| ribosome recycling factor [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189044064|sp|A4SYU8|RRF_POLSQ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145048035|gb|ABP34662.1| ribosome recycling factor [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 186

 Score =  147 bits (372), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 115/176 (65%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N   +M  ++  LK  +  +R+GR +P +L+ + V+ YG+  PL+QVA++ + + R + V
Sbjct: 9   NTDQKMQKSLESLKSSLAKIRSGRANPGILEHIHVDYYGNPTPLSQVASLGLADARTINV 68

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             ++K MVA+VE+ I +S+LGLNP  +G V+R+P+P  TEERR  L KV  +  E +KI+
Sbjct: 69  QPFEKTMVAAVEKAIRDSDLGLNPASQGTVIRVPMPALTEERRRELTKVVKSEGEDTKIA 128

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VRN+RRD  +HLK+  K  + SED      ++IQK+TD  + +ID    EK+KEIM
Sbjct: 129 VRNLRRDANEHLKRLTKDKEISEDEERRATDEIQKMTDKAVVDIDKIIVEKEKEIM 184


>gi|240118875|ref|ZP_04732937.1| ribosome recycling factor [Neisseria gonorrhoeae PID1]
 gi|268604584|ref|ZP_06138751.1| ribosome recycling factor [Neisseria gonorrhoeae PID1]
 gi|268588715|gb|EEZ53391.1| ribosome recycling factor [Neisseria gonorrhoeae PID1]
          Length = 185

 Score =  147 bits (372), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R
Sbjct: 4   DIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKNLIKVVRGEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKVLAAKEEDLM 183


>gi|296127609|ref|YP_003634861.1| ribosome recycling factor [Brachyspira murdochii DSM 12563]
 gi|296019425|gb|ADG72662.1| ribosome recycling factor [Brachyspira murdochii DSM 12563]
          Length = 182

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 80/176 (45%), Positives = 113/176 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ KDRM   IS L+ D+  +RTGR + S+LD VKVEAYGS++PL QV NV+  + R ++
Sbjct: 4   ESYKDRMEKAISSLQNDLKGIRTGRANASILDGVKVEAYGSNMPLKQVGNVSTPDSRTIM 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK +V+ +E+ I +++LG NP  +G  +RI VPE T+ERR  L K      E++KI
Sbjct: 64  IQPFDKGLVSDIEKAILKADLGFNPFNDGGNIRIVVPELTKERREELKKGVRHRGEEAKI 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +VRNIRRD  D +KK  K    +ED   S E  IQ  TD+ IK ID     K+KE+
Sbjct: 124 AVRNIRRDENDKIKKELKDKTITEDESKSQEKRIQNETDAYIKKIDEMINTKEKEL 179


>gi|225856606|ref|YP_002738117.1| ribosome recycling factor [Streptococcus pneumoniae P1031]
 gi|254809536|sp|C1CK29|RRF_STRZP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|225725685|gb|ACO21537.1| ribosome recycling factor [Streptococcus pneumoniae P1031]
          Length = 185

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 113/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG  P  +G V+R+ VP  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGNTPANDGSVIRLVVPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++ 
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLE 184


>gi|193212052|ref|YP_001998005.1| ribosome recycling factor [Chlorobaculum parvum NCIB 8327]
 gi|238692606|sp|B3QL17|RRF_CHLP8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|193085529|gb|ACF10805.1| ribosome recycling factor [Chlorobaculum parvum NCIB 8327]
          Length = 186

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 108/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q I+ RM  TI   + ++ ++RTG+ + ++LD VKVEAYGS +PL QV NV VL+   L
Sbjct: 7   IQKIEPRMKKTIEAFQHEIASIRTGKATTALLDRVKVEAYGSQMPLKQVGNVGVLDVHTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWDK MV +VER I ++NLGLNP  +GQ +RI +P  TEERR   VK+   + E SK
Sbjct: 67  SVQVWDKSMVGAVERAIRDANLGLNPSADGQTVRISIPPLTEERRKEYVKLTKKFGEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN RRD +  L K  K    SED     + +   +     K I     +K+KEIM
Sbjct: 127 VSLRNHRRDLIHELDKLEKEKAISEDDKNHGKKEADDLVHKYEKKITEMIAQKEKEIM 184


>gi|261364373|ref|ZP_05977256.1| ribosome recycling factor [Neisseria mucosa ATCC 25996]
 gi|288567641|gb|EFC89201.1| ribosome recycling factor [Neisseria mucosa ATCC 25996]
          Length = 185

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 116/182 (63%), Gaps = 1/182 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R
Sbjct: 4   DIQKTAESKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV  + AE+
Sbjct: 64  TIGVKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRSEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKEKEISEDEARRGEEAVQKLTDKYIAEADKTLAAKEEDLM 183

Query: 185 HF 186
             
Sbjct: 184 AI 185


>gi|34762371|ref|ZP_00143373.1| Ribosome Recycling Factor (RRF) [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27887953|gb|EAA25019.1| Ribosome Recycling Factor (RRF) [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 190

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 113/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD VKVE YGS VPLNQ+  V+  E R+L
Sbjct: 9   IKECEEKMVKTIEAVKEKFTAIRAGRANVSMLDGVKVENYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ VE+ +  +NLG+ P  +G+V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 69  VIDPWDKSLISKVEKALLAANLGMTPNNDGRVIRLVLPELTAERRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKK--SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK    K    SED +   E  +Q +TD  +K ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEETRVQTLTDKYVKEIDDLLAKKEKEI 187


>gi|317484674|ref|ZP_07943575.1| ribosome recycling factor [Bilophila wadsworthia 3_1_6]
 gi|316924030|gb|EFV45215.1| ribosome recycling factor [Bilophila wadsworthia 3_1_6]
          Length = 186

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRM   +  L +D   LRTGR S  ++D +KV+ YG+  P++Q+A+V + + R +
Sbjct: 7   LLDSEDRMDKALGALDRDFSRLRTGRASTGLVDNIKVDYYGTPTPISQLASVAIPDSRTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+   A VE+ I +S+LGL P+ +G+++RI +P  TE+RR  L K+A    E++K
Sbjct: 67  TIQPWDRGAFAGVEKAILKSDLGLTPVNDGKIIRISIPPLTEDRRKELGKLARKSGEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K    SED +    +D+QK+TD  +  +D     K+KEIM  
Sbjct: 127 VAVRNVRRDANDQLKKLEKDKAISEDELKKATDDVQKLTDRYVAKVDEKCAAKEKEIMDL 186


>gi|254303395|ref|ZP_04970753.1| ribosome recycling factor [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323587|gb|EDK88837.1| ribosome recycling factor [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 190

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 114/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD VKVE YGS VPLNQ+  V+  E R+L
Sbjct: 9   VKECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVENYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ +  +NLG+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VIDPWDKSLISKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKK--SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK    K    SED +   E  +Q +TD  +K ID  F +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEEATVQTLTDKYVKEIDDLFAKKEKEI 187


>gi|229829209|ref|ZP_04455278.1| hypothetical protein GCWU000342_01296 [Shuttleworthia satelles DSM
           14600]
 gi|229792372|gb|EEP28486.1| hypothetical protein GCWU000342_01296 [Shuttleworthia satelles DSM
           14600]
          Length = 189

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 117/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  +++ L  + +++R GR +P +LD ++VE YG+  PL QVANV+V E RM+
Sbjct: 10  LNPYEEKMKKSVNALLAEYVSIRAGRANPHILDKIEVEYYGAPTPLQQVANVSVPEARMI 69

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++  +E+ I+ S++G++P  +G+ +R+  PE TE+RR  LVK      E +K
Sbjct: 70  QIQPWESSLLKEIEKAINMSDVGIHPTNDGKTIRLVFPELTEDRRKELVKDVKKKGENAK 129

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD MD  KK +KS   SED +A LE+  QK+TD  +K +D   ++K +E+M
Sbjct: 130 VAIRNIRRDAMDEFKKLKKSEDMSEDAIADLEDQAQKLTDRYVKILDQEIDKKTQELM 187


>gi|153812431|ref|ZP_01965099.1| hypothetical protein RUMOBE_02830 [Ruminococcus obeum ATCC 29174]
 gi|149831593|gb|EDM86680.1| hypothetical protein RUMOBE_02830 [Ruminococcus obeum ATCC 29174]
          Length = 183

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 78/178 (43%), Positives = 113/178 (63%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +M  T+   + ++ T+R GR +P +LD + V+ YGS  PL QVAN+TV E RM+
Sbjct: 5   VQKYEQKMTKTLDGFEAELTTIRAGRANPHILDKITVDYYGSPTPLQQVANITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++  +E+ I  S+LGLNP  +G+++R+ +PE TEERR  LVK      E +K
Sbjct: 65  QIQPWESSLIKGIEKAILTSDLGLNPSNDGKIVRLVLPELTEERRKDLVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD  D  KK  K    SED V  LE+ +QK+TD  IK ID+  E K KEI+
Sbjct: 125 VAVRNIRRDANDAFKKLTKQD-VSEDEVKDLEDAVQKLTDKFIKKIDAAVEVKSKEIL 181


>gi|85059918|ref|YP_455620.1| ribosome recycling factor [Sodalis glossinidius str. 'morsitans']
 gi|123518938|sp|Q2NRL0|RRF_SODGM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|84780438|dbj|BAE75215.1| ribosome recycling factor [Sodalis glossinidius str. 'morsitans']
          Length = 185

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 109/174 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD ++++ YG   PL Q+AN+   + R L ++V+D
Sbjct: 12  RMEKCVDAFKSHISKVRTGRASPSLLDGIQIDYYGLLTPLRQLANIIAEDSRTLAITVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++SVRN+
Sbjct: 72  RTLAPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRRDLIKVVRAEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K     ED     +++IQK+TD+ IK +DS   EK+ E+M  
Sbjct: 132 RRDANDKVKALLKDKTIGEDEDRRSQDEIQKLTDAWIKKLDSALAEKEAELMEI 185


>gi|94500625|ref|ZP_01307155.1| ribosome recycling factor [Oceanobacter sp. RED65]
 gi|94427180|gb|EAT12160.1| ribosome recycling factor [Oceanobacter sp. RED65]
          Length = 185

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 114/178 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  +++ + +    +RTGR  PS+LD + V+ YG+  P+NQ+ANV V + R L 
Sbjct: 7   KDAEERMKKSLAAMIEAFKKVRTGRAHPSLLDGINVDYYGNPTPINQLANVNVEDGRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K +V  +E+ I +S+LG+ P   G+ +R+P+P  TEE R   +K A A AEK ++
Sbjct: 67  ITPWEKPLVPEIEKAIMKSDLGITPATSGETIRVPMPMLTEETRKGFIKQARAEAEKGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           S+RN+RRD    +K   K  + SED     EN+IQK+TD  I ++DS   EK+K++M 
Sbjct: 127 SIRNVRRDANSSVKDLLKEKEISEDEERQAENEIQKLTDKFIADVDSLLVEKEKDLMQ 184


>gi|59802114|ref|YP_208826.1| Rrf [Neisseria gonorrhoeae FA 1090]
 gi|239997972|ref|ZP_04717896.1| ribosome recycling factor [Neisseria gonorrhoeae 35/02]
 gi|240015050|ref|ZP_04721963.1| ribosome recycling factor [Neisseria gonorrhoeae DGI18]
 gi|240017499|ref|ZP_04724039.1| ribosome recycling factor [Neisseria gonorrhoeae FA6140]
 gi|240081639|ref|ZP_04726182.1| ribosome recycling factor [Neisseria gonorrhoeae FA19]
 gi|240113920|ref|ZP_04728410.1| ribosome recycling factor [Neisseria gonorrhoeae MS11]
 gi|240116653|ref|ZP_04730715.1| ribosome recycling factor [Neisseria gonorrhoeae PID18]
 gi|240122119|ref|ZP_04735081.1| ribosome recycling factor [Neisseria gonorrhoeae PID24-1]
 gi|240124412|ref|ZP_04737368.1| ribosome recycling factor [Neisseria gonorrhoeae PID332]
 gi|240124716|ref|ZP_04737602.1| ribosome recycling factor [Neisseria gonorrhoeae SK-92-679]
 gi|240129089|ref|ZP_04741750.1| ribosome recycling factor [Neisseria gonorrhoeae SK-93-1035]
 gi|254494674|ref|ZP_05107845.1| ribosome recycling factor [Neisseria gonorrhoeae 1291]
 gi|260439588|ref|ZP_05793404.1| ribosome recycling factor [Neisseria gonorrhoeae DGI2]
 gi|268593821|ref|ZP_06127988.1| ribosome-recycling factor [Neisseria gonorrhoeae 35/02]
 gi|268597736|ref|ZP_06131903.1| ribosome-recycling factor [Neisseria gonorrhoeae FA19]
 gi|268599984|ref|ZP_06134151.1| ribosome recycling factor [Neisseria gonorrhoeae MS11]
 gi|268602321|ref|ZP_06136488.1| ribosome recycling factor [Neisseria gonorrhoeae PID18]
 gi|268683041|ref|ZP_06149903.1| ribosome recycling factor [Neisseria gonorrhoeae PID332]
 gi|268683291|ref|ZP_06150153.1| ribosome recycling factor [Neisseria gonorrhoeae SK-92-679]
 gi|268687470|ref|ZP_06154332.1| ribosome recycling factor [Neisseria gonorrhoeae SK-93-1035]
 gi|75432366|sp|Q5F5X3|RRF_NEIG1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|59719009|gb|AAW90414.1| putative ribosome recycling factor [Neisseria gonorrhoeae FA 1090]
 gi|226513714|gb|EEH63059.1| ribosome recycling factor [Neisseria gonorrhoeae 1291]
 gi|268547210|gb|EEZ42628.1| ribosome-recycling factor [Neisseria gonorrhoeae 35/02]
 gi|268551524|gb|EEZ46543.1| ribosome-recycling factor [Neisseria gonorrhoeae FA19]
 gi|268584115|gb|EEZ48791.1| ribosome recycling factor [Neisseria gonorrhoeae MS11]
 gi|268586452|gb|EEZ51128.1| ribosome recycling factor [Neisseria gonorrhoeae PID18]
 gi|268623325|gb|EEZ55725.1| ribosome recycling factor [Neisseria gonorrhoeae PID332]
 gi|268623575|gb|EEZ55975.1| ribosome recycling factor [Neisseria gonorrhoeae SK-92-679]
 gi|268627754|gb|EEZ60154.1| ribosome recycling factor [Neisseria gonorrhoeae SK-93-1035]
 gi|317165416|gb|ADV08957.1| ribosome recycling factor [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 185

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R
Sbjct: 4   DIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKVLAAKEEDLM 183


>gi|256846527|ref|ZP_05551984.1| ribosome recycling factor [Fusobacterium sp. 3_1_36A2]
 gi|294784116|ref|ZP_06749417.1| ribosome recycling factor [Fusobacterium sp. 3_1_27]
 gi|256718296|gb|EEU31852.1| ribosome recycling factor [Fusobacterium sp. 3_1_36A2]
 gi|294488186|gb|EFG35531.1| ribosome recycling factor [Fusobacterium sp. 3_1_27]
          Length = 190

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 113/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD VKVE YGS VPLNQ+  V+  E R+L
Sbjct: 9   IKECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVENYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ VE+ +  +NLG+ P  +G+V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 69  VIDPWDKSLISKVEKALLAANLGMTPNNDGRVIRLVLPELTAERRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKK--SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK    K    SED +   E  +Q +TD  +K ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEETRVQTLTDKYVKEIDDLLAKKEKEI 187


>gi|261880120|ref|ZP_06006547.1| ribosome recycling factor [Prevotella bergensis DSM 17361]
 gi|270333204|gb|EFA43990.1| ribosome recycling factor [Prevotella bergensis DSM 17361]
          Length = 186

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 119/178 (66%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +D+M +   +L++++  +R GR + +++D V+V AYG  VPLNQVA V++ + R +
Sbjct: 8   LKSAEDKMSNGAKYLEEELARVRAGRANVAIVDGVRVNAYGESVPLNQVATVSIADARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +A VE+GI +S++G+ P   G+++ + +P+ TEERR  LVK  +   E++K
Sbjct: 68  TIRPWDRKQIADVEKGIMDSDVGITPENNGEMVILHLPQPTEERRKELVKQCNKIGEQTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + +RNIR +  D LKK+ K G  SED     END+QK+ D  IKN+++  E K KEIM
Sbjct: 128 VQIRNIRSEYKDKLKKAVKDG-LSEDAGKDAENDLQKLHDKYIKNVEAILEAKHKEIM 184


>gi|33592520|ref|NP_880164.1| ribosome recycling factor [Bordetella pertussis Tohama I]
 gi|33596177|ref|NP_883820.1| ribosome recycling factor [Bordetella parapertussis 12822]
 gi|33601585|ref|NP_889145.1| ribosome recycling factor [Bordetella bronchiseptica RB50]
 gi|39932121|sp|Q7VYC7|RRF_BORPE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39932131|sp|Q7WA57|RRF_BORPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39932138|sp|Q7WJ91|RRF_BORBR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33572166|emb|CAE41712.1| ribosome recycling factor [Bordetella pertussis Tohama I]
 gi|33573180|emb|CAE36832.1| ribosome recycling factor [Bordetella parapertussis]
 gi|33576021|emb|CAE33101.1| ribosome recycling factor [Bordetella bronchiseptica RB50]
 gi|332381938|gb|AEE66785.1| ribosome recycling factor [Bordetella pertussis CS]
          Length = 186

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  LK  +  +RTGR    +LD V+VE YGS VP++QVANV +++ R + V  ++
Sbjct: 13  RMAKSLETLKASLAKIRTGRAHTGILDHVQVEYYGSPVPISQVANVNLVDARTISVQPYE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M   +E+ I ES+LGLNP+  G+ +R+P+P  TEERR  L KV  +  E +K++VRN+
Sbjct: 73  KSMAGPIEKAIRESDLGLNPVSMGETIRVPMPALTEERRRDLTKVVKSEGEDAKVAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+  + LKK  K  + SED     ++D+QK+TD  + +ID    +K+ EIM
Sbjct: 133 RREANEALKKLVKDKEISEDDERRAQDDVQKLTDRAVGDIDKMIVQKEAEIM 184


>gi|255067012|ref|ZP_05318867.1| ribosome recycling factor [Neisseria sicca ATCC 29256]
 gi|255048837|gb|EET44301.1| ribosome recycling factor [Neisseria sicca ATCC 29256]
          Length = 185

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 116/182 (63%), Gaps = 1/182 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R
Sbjct: 4   DIQKTAESKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV  + AE+
Sbjct: 64  TIGVKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRSEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKTLAAKEEDLM 183

Query: 185 HF 186
             
Sbjct: 184 AI 185


>gi|227551763|ref|ZP_03981812.1| ribosome recycling factor [Enterococcus faecium TX1330]
 gi|257878533|ref|ZP_05658186.1| ribosome recycling factor [Enterococcus faecium 1,230,933]
 gi|257883168|ref|ZP_05662821.1| ribosome recycling factor [Enterococcus faecium 1,231,502]
 gi|257884335|ref|ZP_05663988.1| ribosome recycling factor [Enterococcus faecium 1,231,501]
 gi|257887076|ref|ZP_05666729.1| ribosome recycling factor [Enterococcus faecium 1,141,733]
 gi|257889270|ref|ZP_05668923.1| ribosome recycling factor [Enterococcus faecium 1,231,410]
 gi|257895641|ref|ZP_05675294.1| ribosome recycling factor [Enterococcus faecium Com12]
 gi|257898231|ref|ZP_05677884.1| ribosome recycling factor [Enterococcus faecium Com15]
 gi|258615941|ref|ZP_05713711.1| ribosome recycling factor [Enterococcus faecium DO]
 gi|260560118|ref|ZP_05832296.1| ribosome recycling factor [Enterococcus faecium C68]
 gi|261208147|ref|ZP_05922821.1| ribosome recycling factor [Enterococcus faecium TC 6]
 gi|289566196|ref|ZP_06446629.1| ribosome recycling factor [Enterococcus faecium D344SRF]
 gi|293377748|ref|ZP_06623937.1| ribosome recycling factor [Enterococcus faecium PC4.1]
 gi|293556642|ref|ZP_06675207.1| ribosome recycling factor [Enterococcus faecium E1039]
 gi|293560147|ref|ZP_06676650.1| ribosome recycling factor [Enterococcus faecium E1162]
 gi|293567410|ref|ZP_06678757.1| ribosome recycling factor [Enterococcus faecium E1071]
 gi|293570620|ref|ZP_06681671.1| ribosome recycling factor [Enterococcus faecium E980]
 gi|294613944|ref|ZP_06693879.1| ribosome recycling factor [Enterococcus faecium E1636]
 gi|294620329|ref|ZP_06699645.1| ribosome recycling factor [Enterococcus faecium E1679]
 gi|294620756|ref|ZP_06699963.1| ribosome recycling factor [Enterococcus faecium U0317]
 gi|314937498|ref|ZP_07844831.1| ribosome recycling factor [Enterococcus faecium TX0133a04]
 gi|314942157|ref|ZP_07849011.1| ribosome recycling factor [Enterococcus faecium TX0133C]
 gi|314947503|ref|ZP_07850918.1| ribosome recycling factor [Enterococcus faecium TX0082]
 gi|314951490|ref|ZP_07854539.1| ribosome recycling factor [Enterococcus faecium TX0133A]
 gi|314992580|ref|ZP_07857998.1| ribosome recycling factor [Enterococcus faecium TX0133B]
 gi|314995485|ref|ZP_07860585.1| ribosome recycling factor [Enterococcus faecium TX0133a01]
 gi|227179068|gb|EEI60040.1| ribosome recycling factor [Enterococcus faecium TX1330]
 gi|257812761|gb|EEV41519.1| ribosome recycling factor [Enterococcus faecium 1,230,933]
 gi|257818826|gb|EEV46154.1| ribosome recycling factor [Enterococcus faecium 1,231,502]
 gi|257820173|gb|EEV47321.1| ribosome recycling factor [Enterococcus faecium 1,231,501]
 gi|257823130|gb|EEV50062.1| ribosome recycling factor [Enterococcus faecium 1,141,733]
 gi|257825630|gb|EEV52256.1| ribosome recycling factor [Enterococcus faecium 1,231,410]
 gi|257832206|gb|EEV58627.1| ribosome recycling factor [Enterococcus faecium Com12]
 gi|257836143|gb|EEV61217.1| ribosome recycling factor [Enterococcus faecium Com15]
 gi|260073953|gb|EEW62277.1| ribosome recycling factor [Enterococcus faecium C68]
 gi|260077581|gb|EEW65298.1| ribosome recycling factor [Enterococcus faecium TC 6]
 gi|289161974|gb|EFD09841.1| ribosome recycling factor [Enterococcus faecium D344SRF]
 gi|291589807|gb|EFF21608.1| ribosome recycling factor [Enterococcus faecium E1071]
 gi|291593219|gb|EFF24793.1| ribosome recycling factor [Enterococcus faecium E1636]
 gi|291593441|gb|EFF24999.1| ribosome recycling factor [Enterococcus faecium E1679]
 gi|291599736|gb|EFF30746.1| ribosome recycling factor [Enterococcus faecium U0317]
 gi|291601177|gb|EFF31464.1| ribosome recycling factor [Enterococcus faecium E1039]
 gi|291605880|gb|EFF35311.1| ribosome recycling factor [Enterococcus faecium E1162]
 gi|291609291|gb|EFF38562.1| ribosome recycling factor [Enterococcus faecium E980]
 gi|292643748|gb|EFF61869.1| ribosome recycling factor [Enterococcus faecium PC4.1]
 gi|313590319|gb|EFR69164.1| ribosome recycling factor [Enterococcus faecium TX0133a01]
 gi|313592872|gb|EFR71717.1| ribosome recycling factor [Enterococcus faecium TX0133B]
 gi|313596330|gb|EFR75175.1| ribosome recycling factor [Enterococcus faecium TX0133A]
 gi|313599080|gb|EFR77925.1| ribosome recycling factor [Enterococcus faecium TX0133C]
 gi|313643139|gb|EFS07719.1| ribosome recycling factor [Enterococcus faecium TX0133a04]
 gi|313646053|gb|EFS10633.1| ribosome recycling factor [Enterococcus faecium TX0082]
          Length = 185

 Score =  147 bits (372), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 117/176 (66%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M      L++++  +R GR + S+LD + V  YG+  PLNQ+A++ + E R+L+++ 
Sbjct: 10  KEKMKKAAQNLQRELGQIRAGRANASLLDRITVNYYGAPTPLNQMASIQIPEARVLMITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  VE+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE +KI++R
Sbjct: 70  FDKSILQDVEKAIMASDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENAKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD +D  KK +K+G  +ED +  LE D+Q +TD++IK +D    +K+KE++  
Sbjct: 130 NIRRDAIDEYKKQQKNGDITEDDLRGLEKDVQTLTDNSIKEVDKIAADKEKELLEV 185


>gi|284928759|ref|YP_003421281.1| ribosome recycling factor [cyanobacterium UCYN-A]
 gi|284809218|gb|ADB94923.1| ribosome recycling factor [cyanobacterium UCYN-A]
          Length = 181

 Score =  147 bits (372), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++KD M  T+   +K   TLRTGR + ++LD V V+ YGS V L  +AN+   +   L
Sbjct: 2   LNDLKDSMKKTVESTQKSFNTLRTGRANSAILDRVTVDYYGSEVQLKSLANINTPDATTL 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  +  +E+ I+ S++GL P  +GQV+R+ +P  T+ERR  LVK+A+  AE+ K
Sbjct: 62  LIQPFDRGSIGQIEKAINMSDVGLTPNNDGQVIRLNIPPLTKERRKELVKIANKMAEEGK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD ++ ++K  K G ASED   +L+++IQK+TD   K ID     K K+IM
Sbjct: 122 VAIRNIRRDAIETVRKQEKDGDASEDESRNLQDNIQKVTDEFTKKIDELLTIKNKDIM 179


>gi|37926485|pdb|1ISE|A Chain A, Crystal Structure Of A Mutant Of Ribosome Recycling Factor
           From Escherichia Coli, Arg132gly
          Length = 185

 Score =  147 bits (372), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+
Sbjct: 72  RSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            RD  D +K   K  + SED     ++D+QK+TD+ IK I++   +K+ E+M F
Sbjct: 132 GRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF 185


>gi|322388009|ref|ZP_08061616.1| ribosome recycling factor [Streptococcus infantis ATCC 700779]
 gi|321141282|gb|EFX36780.1| ribosome recycling factor [Streptococcus infantis ATCC 700779]
          Length = 185

 Score =  147 bits (372), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 114/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHHSLSREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKTSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  +K+ID     K+KE++
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKATDDAVKHIDDMTANKEKELL 183


>gi|254513846|ref|ZP_05125907.1| ribosome recycling factor [gamma proteobacterium NOR5-3]
 gi|219676089|gb|EED32454.1| ribosome recycling factor [gamma proteobacterium NOR5-3]
          Length = 185

 Score =  147 bits (372), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 108/174 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM +++  L  +   +RTGR  PS+LD +KV  YG+  PL+QVANV V + R L ++ WD
Sbjct: 12  RMKNSLEALGTNFNKIRTGRAHPSLLDGIKVSYYGADTPLSQVANVNVEDARTLSLTAWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M+  +ER I +S+LGLNP   G+V+RIP+P  TEE R   +K A + AE +++SVRN 
Sbjct: 72  RSMIPDIERAIMKSDLGLNPATAGEVIRIPMPALTEETRKGYIKQARSEAEAARVSVRNA 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD M  LK+  K  +  ED     ++ IQK+TDS +  +D     K+ +++  
Sbjct: 132 RRDAMGMLKELVKDKEIGEDDERRGQDQIQKLTDSFVARVDEMLTAKEADLLEI 185


>gi|331005977|ref|ZP_08329322.1| Ribosome recycling factor [gamma proteobacterium IMCC1989]
 gi|330420222|gb|EGG94543.1| Ribosome recycling factor [gamma proteobacterium IMCC1989]
          Length = 185

 Score =  147 bits (372), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  K +M  ++  L  +   +RTGR  PS+LD +KV+ YGS  PL+QVAN++VL+ R L 
Sbjct: 7   QEAKVQMQKSLEALGINFNKIRTGRAHPSILDGIKVDYYGSDTPLSQVANISVLDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K++   +E+ I +S+LGLNP   G ++R+P+P  TEE R    K A + AE +KI
Sbjct: 67  ISPWEKQLTPQIEKAIMKSDLGLNPSTTGDLIRLPMPMLTEETRKNYTKQAKSEAESAKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN RRD + HLK   K  +  ED     +++IQKITD  + +IDS   +K+ +++  
Sbjct: 127 SVRNARRDALGHLKDLLKDKEIGEDDERRGQDEIQKITDKFVADIDSALADKETDLLKI 185


>gi|224372138|ref|YP_002606510.1| ribosome recycling factor [Nautilia profundicola AmH]
 gi|223590013|gb|ACM93749.1| ribosome recycling factor [Nautilia profundicola AmH]
          Length = 184

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 110/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M  +I  LKKD+ TLRTG+VS  +LD VKVE YG+  PLNQVANV  ++   +VVS 
Sbjct: 9   KEHMEKSIEVLKKDLNTLRTGKVSIHVLDGVKVEYYGAPTPLNQVANVNAVDATTIVVSP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK ++  +ER I E+N+G NP  +G V+++  P  TEE R    K A  +AEK+KI++R
Sbjct: 69  WDKSIINDIERAIQEANVGANPNNDGDVIKLYFPPMTEEERKKQAKKAKEFAEKAKIAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRRD  D +KK  K  + +ED        +Q+ITD+ +  +D    +K  ++M
Sbjct: 129 NIRRDANDDIKKMFKDKEITEDDQKRGLEKVQEITDAYVAKVDEIVNKKIDDVM 182


>gi|323143563|ref|ZP_08078240.1| ribosome recycling factor [Succinatimonas hippei YIT 12066]
 gi|322416626|gb|EFY07283.1| ribosome recycling factor [Succinatimonas hippei YIT 12066]
          Length = 185

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+   RM   I  L   +  +RTGR  P +LD + V+ YGS  PL QVA V V + R L 
Sbjct: 7   QDASVRMQKAIDSLSSRLAKIRTGRAQPGILDGIMVDYYGSPTPLRQVAQVNVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+  +  VE+ I +S+LGLNP+V G  +R+P+P  TEERR  LVKV     E++++
Sbjct: 67  LTVFDRNAIKDVEKAIQKSDLGLNPVVAGIDIRVPLPPLTEERRKDLVKVVRGEIEQTRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RNIRRD  + LK   K+ + SED     E+ IQK+TD+++K  D     K+KE+M  
Sbjct: 127 EIRNIRRDANNELKALEKAKEISEDEQHGGEDQIQKLTDASVKKCDELLAAKEKELMEI 185


>gi|319948055|ref|ZP_08022229.1| ribosome recycling factor [Dietzia cinnamea P4]
 gi|319438294|gb|EFV93240.1| ribosome recycling factor [Dietzia cinnamea P4]
          Length = 185

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +  ++ ++ ++RTGR +P M + V  E YG+  P+ Q++++TV EPRML
Sbjct: 6   LLEAEEKMERALEHVRDELASIRTGRANPGMFNRVLCEYYGTLTPITQMSSITVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++   +  +E  I  S+LG+NP  +GQVLR+ VP+ TEERR  LVK A A AE  +
Sbjct: 66  IIKPYEMSQIGPIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRRDLVKQAKAKAEDGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VR +RR  MD LK+ +K G+A ED V + E ++ K+T   + ++D   + K+ E+M 
Sbjct: 126 IAVRGVRRKAMDELKRIQKDGEAGEDEVTAAEKELDKLTQRYVADVDDLVKVKEGELME 184


>gi|294672862|ref|YP_003573478.1| ribosome recycling factor [Prevotella ruminicola 23]
 gi|294472820|gb|ADE82209.1| ribosome recycling factor [Prevotella ruminicola 23]
          Length = 186

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 116/178 (65%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM     +L++++  +R GR + ++LD V+VE YGS VPLNQVANV+V +PR +
Sbjct: 8   LNKSEERMEMAAMYLEEELNRIRAGRANVAILDAVRVEVYGSKVPLNQVANVSVPDPRTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ + ++E+ I +S++G+ P   G+++R+ +P+ TEERR  L K  +  AEK+K
Sbjct: 68  AIKPWDRKEIRNIEKAIMDSDVGITPENNGEIIRLNIPQPTEERRRDLTKQCNKIAEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VRN+R D  D LKK+ K G  SED+    E ++QK+ D  IK ID     K KEIM
Sbjct: 128 VEVRNVRGDIKDKLKKAIKDG-LSEDLEKDAEAELQKLHDKFIKKIDELITAKNKEIM 184


>gi|219847470|ref|YP_002461903.1| ribosome recycling factor [Chloroflexus aggregans DSM 9485]
 gi|254809501|sp|B8G461|RRF_CHLAD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219541729|gb|ACL23467.1| ribosome recycling factor [Chloroflexus aggregans DSM 9485]
          Length = 185

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 70/164 (42%), Positives = 112/164 (68%)

Query: 21  LKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE 80
           L+  + ++RTGR S ++++ + VEAYG+++PLNQ+AN++V EPRM+++  +D  M+ ++E
Sbjct: 20  LRHHLASIRTGRASAALVEHLHVEAYGTNMPLNQLANISVPEPRMIIIQPYDTGMIKAIE 79

Query: 81  RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           + I +S+LGLNP  +G+++R+PVP  TEERR  LVK+     E+ K+SVRN RRD +D L
Sbjct: 80  KAIQQSDLGLNPSNDGRIIRLPVPPLTEERRRELVKMVRHRVEEVKVSVRNQRRDAIDDL 139

Query: 141 KKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KK       SED +   +  IQ++TD   + +D    EK+ E+M
Sbjct: 140 KKLEADKLISEDELHRGQERIQQLTDRCNRELDQIGAEKEAEVM 183


>gi|305681279|ref|ZP_07404086.1| ribosome recycling factor [Corynebacterium matruchotii ATCC 14266]
 gi|305659484|gb|EFM48984.1| ribosome recycling factor [Corynebacterium matruchotii ATCC 14266]
          Length = 185

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ M  T+   ++++ T+RTGR +P+M + V  + YG   P+ Q+A V+V E RM+
Sbjct: 6   LLECEEHMSTTVDRTREELTTIRTGRANPAMFNGVVADYYGVPTPITQMATVSVPEARMM 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++  M+  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A +  E  K
Sbjct: 66  LIKPYEMSMMGVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMVKLAKSKGEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RR GMD LKK  K G A ED V + E ++ K+T   +  +D   ++K+ E+M  
Sbjct: 126 IAIRNVRRKGMDQLKKIHKDGDAGEDEVQAAEKELDKVTQKYVAAVDEVVQKKEAELMEV 185


>gi|313667490|ref|YP_004047774.1| ribosome recycling factor [Neisseria lactamica ST-640]
 gi|309379113|emb|CBX22244.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313004952|emb|CBN86379.1| ribosome recycling factor [Neisseria lactamica 020-06]
          Length = 185

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R
Sbjct: 4   DIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFEGNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLTAKEEDLM 183


>gi|158520494|ref|YP_001528364.1| ribosome recycling factor [Desulfococcus oleovorans Hxd3]
 gi|238686879|sp|A8ZTM3|RRF_DESOH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|158509320|gb|ABW66287.1| ribosome recycling factor [Desulfococcus oleovorans Hxd3]
          Length = 185

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + I+++MG T+   K D+  +RTGR S ++LD + V+ YG+  PLNQ+A+++V E R++V
Sbjct: 7   EEIEEKMGKTLEVFKNDLKKVRTGRASLALLDGIVVDYYGTPTPLNQLASLSVPESRLIV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD   +  VE+ I ++N+ L P  +G+V+R+ +P  TE+RR  + K  +  AE+ K+
Sbjct: 67  IQPWDATAIKDVEKAILQANIDLTPSNDGKVIRLSIPPLTEDRRKEIAKRVNQMAEEHKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  + LK+ +K G  SED   + ++ +QK+TD  I+ ID  F+ K+KEI+  
Sbjct: 127 AMRNIRRDANETLKQMKKDGDISEDESFAGKDKVQKVTDGYIERIDEVFKAKEKEILEL 185


>gi|218247353|ref|YP_002372724.1| ribosome recycling factor [Cyanothece sp. PCC 8801]
 gi|218167831|gb|ACK66568.1| ribosome recycling factor [Cyanothece sp. PCC 8801]
          Length = 181

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 117/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++D M  ++   ++   T+RTGR + S+LD V VE YG   PLNQ+AN+T  +   +
Sbjct: 2   LAELEDNMQKSVEATQRSFNTIRTGRANASLLDRVIVEYYGMETPLNQLANITTPDATTI 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK  + ++E+ I+ S+LGL P  +G+V+R+ +P  TEERR  LVK+A   AE+ K
Sbjct: 62  NILPYDKGSMGAIEKAINLSDLGLTPNNDGKVIRLNIPPLTEERRKELVKLAGKLAEEGK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRDG+D ++K  K+ + SED   +L+++IQKITD     ID   + K+K+IM
Sbjct: 122 VAIRNIRRDGIDTVRKQEKNNEISEDESRNLQDEIQKITDKFTTKIDELLKVKEKDIM 179


>gi|197303245|ref|ZP_03168286.1| hypothetical protein RUMLAC_01968 [Ruminococcus lactaris ATCC
           29176]
 gi|197297671|gb|EDY32230.1| hypothetical protein RUMLAC_01968 [Ruminococcus lactaris ATCC
           29176]
          Length = 183

 Score =  147 bits (371), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 79/184 (42%), Positives = 116/184 (63%), Gaps = 3/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+ I   ++K  M  TI+ L  ++ T+R GR +P +LD + V+ YGS  P+ QVANV+V
Sbjct: 1   MNEKIAAYDVK--MTKTINNLDGELATIRAGRANPHVLDKIAVDYYGSPTPIQQVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+K M+ ++E+ I  S++G+NP  +G  +R+  PE TE+RR  L K    
Sbjct: 59  PEARMIQIQPWEKSMLKAIEKAILTSDIGINPTNDGTSIRLVFPELTEDRRKELAKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++K++VRNIRRDG    KK  K  + SED +  LE+++QKITD  I  +D   E K 
Sbjct: 119 KGEEAKVAVRNIRRDGNVAFKK-LKGTEISEDEIKDLEDELQKITDKYIAQVDKMVEAKS 177

Query: 181 KEIM 184
           KEIM
Sbjct: 178 KEIM 181


>gi|327480157|gb|AEA83467.1| ribosome recycling factor [Pseudomonas stutzeri DSM 4166]
          Length = 185

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 107/177 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  T+  L      +RTGR  PS+LD V V  YG+  PL QVANV   + R L 
Sbjct: 7   QDAQERMKKTLEALDHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE +++
Sbjct: 67  LTVFDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRKGYTKQARAEAENARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  LK   K  + SED     ++D+QK+TD  +  ID   E K+ ++M
Sbjct: 127 AVRNIRRDAIAQLKDLVKEKEISEDEERRGQDDVQKLTDKYVAEIDKALEGKEADLM 183


>gi|183981840|ref|YP_001850131.1| ribosome recycling factor Frr [Mycobacterium marinum M]
 gi|238689247|sp|B2HJP0|RRF_MYCMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|183175166|gb|ACC40276.1| ribosome recycling factor Frr [Mycobacterium marinum M]
          Length = 185

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  ++DM T+RTGR +P M   + ++ YG+H P+ Q+A++ V E RM+
Sbjct: 6   LFDAEEKMEKAVSVAREDMATIRTGRANPGMFSRIVIDYYGTHTPITQLASINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A    E+++
Sbjct: 66  VIKPYEANQLHAIETAIRNSDLGVNPTNDGTIIRVAVPQLTEERRRDLVKQAKHKGEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRNIRR  M+ L + RK G+A ED VA  E D+ K T   +  ID   + K+ E++
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVARAEKDLDKSTHQYVAQIDELVKHKEGELL 183


>gi|225077039|ref|ZP_03720238.1| hypothetical protein NEIFLAOT_02091 [Neisseria flavescens
           NRL30031/H210]
 gi|224951596|gb|EEG32805.1| hypothetical protein NEIFLAOT_02091 [Neisseria flavescens
           NRL30031/H210]
          Length = 185

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 110/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  LK ++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + V  ++
Sbjct: 12  KMQRSLEVLKDNLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIGVKPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  SNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 132 RRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLAAKEEDLM 183


>gi|134094563|ref|YP_001099638.1| ribosome recycling factor [Herminiimonas arsenicoxydans]
 gi|166230793|sp|A4G4S4|RRF_HERAR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|133738466|emb|CAL61511.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Herminiimonas arsenicoxydans]
          Length = 186

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 113/172 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I  LK D+  +RTGR    +LD V VE YG+   L QVANVT+++ R + V  ++
Sbjct: 13  KMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLTQVANVTLIDARTIGVQPFE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MVA VE+ I +++LGLNP  +G+++R+P P  TEERR  +VK+  + AE +KI++RNI
Sbjct: 73  KKMVAVVEKAIRDADLGLNPATQGEMIRVPTPPLTEERRKEMVKLVKSEAEDAKIAIRNI 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  + LKK  K    SED     +++IQK+TD  +  +D    EK+KE++
Sbjct: 133 RRDANETLKKLLKDKACSEDDERRAQDEIQKLTDKFVLEVDKLVVEKEKEVL 184


>gi|16759209|ref|NP_454826.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16763609|ref|NP_459224.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29140759|ref|NP_804101.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62178789|ref|YP_215206.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161504662|ref|YP_001571774.1| ribosome recycling factor [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|161612590|ref|YP_001586555.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167553369|ref|ZP_02347118.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167990104|ref|ZP_02571204.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168230526|ref|ZP_02655584.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168234997|ref|ZP_02660055.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168244985|ref|ZP_02669917.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168263914|ref|ZP_02685887.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168464218|ref|ZP_02698121.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168823247|ref|ZP_02835247.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194445385|ref|YP_002039459.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450690|ref|YP_002044209.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194470770|ref|ZP_03076754.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194737420|ref|YP_002113242.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251811|ref|YP_002145224.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197261812|ref|ZP_03161886.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|198242060|ref|YP_002214180.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200388182|ref|ZP_03214794.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204927412|ref|ZP_03218614.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205351556|ref|YP_002225357.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207855737|ref|YP_002242388.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213163136|ref|ZP_03348846.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213416682|ref|ZP_03349826.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
 gi|213425945|ref|ZP_03358695.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213580802|ref|ZP_03362628.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213646665|ref|ZP_03376718.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|224582067|ref|YP_002635865.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238911285|ref|ZP_04655122.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289825712|ref|ZP_06544880.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|54039297|sp|P66739|RRF_SALTI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|54042005|sp|P66738|RRF_SALTY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|75484798|sp|Q57T36|RRF_SALCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044071|sp|A9MPI9|RRF_SALAR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044072|sp|A9N0S0|RRF_SALPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749937|sp|B5F8T3|RRF_SALA4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749938|sp|B5FJ19|RRF_SALDC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749939|sp|B5R3I5|RRF_SALEP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749940|sp|B5RHF7|RRF_SALG2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689764|sp|B4TYD2|RRF_SALSV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238690679|sp|B4TK47|RRF_SALHS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238693523|sp|B4SV01|RRF_SALNS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809528|sp|C0Q6J5|RRF_SALPC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|25299716|pir||AE0529 ribosome recycling factor [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16418724|gb|AAL19183.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16501500|emb|CAD08677.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136383|gb|AAO67950.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62126422|gb|AAX64125.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|160866009|gb|ABX22632.1| hypothetical protein SARI_02783 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161361954|gb|ABX65722.1| hypothetical protein SPAB_00281 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404048|gb|ACF64270.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408994|gb|ACF69213.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457134|gb|EDX45973.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194712922|gb|ACF92143.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195632657|gb|EDX51111.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197215514|gb|ACH52911.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197240067|gb|EDY22687.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197291879|gb|EDY31229.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197936576|gb|ACH73909.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199605280|gb|EDZ03825.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204324077|gb|EDZ09272.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205271337|emb|CAR36130.1| Ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205322189|gb|EDZ10028.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205331572|gb|EDZ18336.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205335095|gb|EDZ21859.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205336212|gb|EDZ22976.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205340485|gb|EDZ27249.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347503|gb|EDZ34134.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206707540|emb|CAR31814.1| Ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224466594|gb|ACN44424.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245451|emb|CBG23241.1| RRF [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267991909|gb|ACY86794.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301156846|emb|CBW16322.1| Ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911189|dbj|BAJ35163.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320084473|emb|CBY94266.1| Ribosome-recycling factor RRF; Ribosome-releasing factor
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321222197|gb|EFX47269.1| Ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322616043|gb|EFY12960.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620826|gb|EFY17686.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322623823|gb|EFY20660.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627271|gb|EFY24062.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322630578|gb|EFY27342.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322638204|gb|EFY34905.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640689|gb|EFY37340.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645527|gb|EFY42054.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648179|gb|EFY44646.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322657130|gb|EFY53413.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657500|gb|EFY53772.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663820|gb|EFY60020.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322666653|gb|EFY62831.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322672189|gb|EFY68301.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676500|gb|EFY72571.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322679408|gb|EFY75453.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686265|gb|EFY82249.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322713243|gb|EFZ04814.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323128539|gb|ADX15969.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323193445|gb|EFZ78653.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323197533|gb|EFZ82668.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323201198|gb|EFZ86267.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323209593|gb|EFZ94526.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212155|gb|EFZ96979.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216460|gb|EGA01186.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223350|gb|EGA07685.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225911|gb|EGA10131.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323228548|gb|EGA12677.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323236839|gb|EGA20915.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239661|gb|EGA23708.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242292|gb|EGA26321.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249954|gb|EGA33850.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252384|gb|EGA36235.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255667|gb|EGA39420.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262896|gb|EGA46446.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323265382|gb|EGA48878.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323271831|gb|EGA55249.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326621923|gb|EGE28268.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326626582|gb|EGE32925.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
 gi|332987171|gb|AEF06154.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 185

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 110/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+
Sbjct: 72  RSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K    SED     + ++QK+TD+ IK +D+   +K+ E+M F
Sbjct: 132 RRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDAALADKEAELMQF 185


>gi|258406064|ref|YP_003198806.1| ribosome recycling factor [Desulfohalobium retbaense DSM 5692]
 gi|257798291|gb|ACV69228.1| ribosome recycling factor [Desulfohalobium retbaense DSM 5692]
          Length = 184

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 112/176 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM   I+ L+K+   LRTGR S S++D ++V  Y +  PLNQ+A++++ + R + +  
Sbjct: 9   KKRMEKAITNLEKEFSRLRTGRASASLVDGIQVSYYNTPTPLNQLASISIPDARTIAIQP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD+    ++E+ I +S+LGLNP+ +G+++RI +P  TEERR  LVK+A  + E +KI++R
Sbjct: 69  WDRSSFENIEKAIMQSDLGLNPVNDGKIIRINIPALTEERRKELVKIAKKHTEDAKIAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD  + LKK +     SED +   +  IQK+TD  +   +    EK+KEIM  
Sbjct: 129 NIRRDANEELKKQKNDKTISEDDMHRGQEKIQKLTDEFVDKAEKTLTEKEKEIMEI 184


>gi|332701342|ref|ZP_08421430.1| Ribosome-recycling factor [Desulfovibrio africanus str. Walvis Bay]
 gi|332551491|gb|EGJ48535.1| Ribosome-recycling factor [Desulfovibrio africanus str. Walvis Bay]
          Length = 184

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 113/181 (62%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +++ ++ RM   +  LK++   LRTGR S ++L+ + ++ YGS  P++QVA+V   + R 
Sbjct: 4   EIKELETRMQKVVENLKREFGRLRTGRASTTLLEGINIDYYGSSTPISQVASVATPDSRT 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + +  WD+     +E+ I  S+LGLNP+ +G+++RI +P  TEERR  LVK+   Y E+ 
Sbjct: 64  ITIQPWDRGSFGPIEKAIMTSDLGLNPVNDGKIIRISLPPLTEERRKDLVKLGKKYTEEG 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K++VRNIRRDG D LKK  K    +ED +   +++IQK+TD  +   D     K+KEIM 
Sbjct: 124 KVAVRNIRRDGNDTLKKLEKDKTITEDDLRRGQDEIQKLTDKYVAKCDEALAVKEKEIME 183

Query: 186 F 186
            
Sbjct: 184 I 184


>gi|153815802|ref|ZP_01968470.1| hypothetical protein RUMTOR_02047 [Ruminococcus torques ATCC 27756]
 gi|317502106|ref|ZP_07960287.1| ribosome recycling factor [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090380|ref|ZP_08339261.1| ribosome-recycling factor [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846827|gb|EDK23745.1| hypothetical protein RUMTOR_02047 [Ruminococcus torques ATCC 27756]
 gi|316896495|gb|EFV18585.1| ribosome recycling factor [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401127|gb|EGG80720.1| ribosome-recycling factor [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 183

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 78/172 (45%), Positives = 109/172 (63%), Gaps = 1/172 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  TI+ L  ++ T+R GR +P +LD + V+ YGS  P+ QVANV+V E RM+ +  W+
Sbjct: 11  KMTKTINNLDGELATIRAGRANPHVLDKLTVDYYGSPTPIQQVANVSVPEARMIQIQPWE 70

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+  +E+ I  S+LG+NP  +G  +R+  PE TE+RR  L K      E +K++VRNI
Sbjct: 71  KSMLKEIEKAILMSDLGINPTNDGSTVRLVFPELTEDRRKELAKDVKKKGEAAKVAVRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRDG    KK  K  + SED +  LE+D+QKITD  I+ ID   E K KEIM
Sbjct: 131 RRDGNVAFKK-LKGTEVSEDEIKDLEDDLQKITDKYIEKIDKMVEVKTKEIM 181


>gi|126657954|ref|ZP_01729107.1| ribosome releasing factor [Cyanothece sp. CCY0110]
 gi|126620894|gb|EAZ91610.1| ribosome releasing factor [Cyanothece sp. CCY0110]
          Length = 181

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++KD M  ++   ++   T+RTGR + S+LD V VE YG+  PL Q+AN++  +   +
Sbjct: 2   LDDLKDNMQKSVEATQRSFNTIRTGRANASILDRVTVEYYGTETPLYQLANISTPDATTI 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +  +E+ I  S++GL P  +G V+R+ +P  TEERR  LVK+A   AE+ K
Sbjct: 62  MIQPYDKGSMGQIEKAIQMSDVGLTPNNDGNVIRLNIPPLTEERRKDLVKLASKMAEEGK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD +D ++K  K+   SED    L++DIQK+TD   + ID     K+K+IM
Sbjct: 122 VAIRNIRRDAIDDVRKQEKNSDISEDESRGLQDDIQKVTDQFTEKIDDLLTAKEKDIM 179


>gi|161870876|ref|YP_001600050.1| ribosome recycling factor [Neisseria meningitidis 053442]
 gi|161596429|gb|ABX74089.1| ribosome recycling factor [Neisseria meningitidis 053442]
 gi|254672753|emb|CBA06770.1| Ribosome recycling factor [Neisseria meningitidis alpha275]
 gi|308388405|gb|ADO30725.1| ribosome recycling factor [Neisseria meningitidis alpha710]
          Length = 208

 Score =  147 bits (371), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 76/184 (41%), Positives = 116/184 (63%), Gaps = 1/184 (0%)

Query: 2   NQVIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           N + D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+
Sbjct: 23  NMINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTL 82

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R + V  ++  M   VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV   
Sbjct: 83  LDARTIGVKPFEGNMAVKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRG 142

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K+
Sbjct: 143 EAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKE 202

Query: 181 KEIM 184
           +++M
Sbjct: 203 EDLM 206


>gi|330504241|ref|YP_004381110.1| ribosome recycling factor [Pseudomonas mendocina NK-01]
 gi|328918527|gb|AEB59358.1| ribosome recycling factor [Pseudomonas mendocina NK-01]
          Length = 185

 Score =  147 bits (370), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  L +++ ++RTGR  PS+LD +KV A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMSKSLEALGRNLASIRTGRAHPSILDSIKVPAWGSDMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A   AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQARGVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD +  LKK  K+ + SED      +++QKITD  I ++D   E K+ ++M
Sbjct: 127 AVRNVRRDALAELKKLSKAKEISEDEERRAADELQKITDKFIGDVDKALEVKEADLM 183


>gi|163786583|ref|ZP_02181031.1| ribosome releasing factor [Flavobacteriales bacterium ALC-1]
 gi|159878443|gb|EDP72499.1| ribosome releasing factor [Flavobacteriales bacterium ALC-1]
          Length = 184

 Score =  147 bits (370), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 109/174 (62%), Gaps = 4/174 (2%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M   I  L+K ++ +R G+ SPSML  V V+ YGS  PL+QVANV   + R + V  
Sbjct: 13  KEAMDSAIKHLEKQLINIRAGKASPSMLGSVMVDYYGSQTPLSQVANVNTPDGRTISVQP 72

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K M+  +ERGI  +NLG NP+  G+++ I VP  TEERR  L K A A  E +KI +R
Sbjct: 73  WEKSMLQEIERGIMVANLGFNPMNNGEMVIINVPPLTEERRRDLAKQAKAETEDAKIGIR 132

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R+D M+ +    KS   SED+  + E D+Q++TDS +K ID   + K+KEIM
Sbjct: 133 NARKDAMNDI----KSTDVSEDLQKNAEIDVQELTDSYVKRIDDILDLKEKEIM 182


>gi|325262932|ref|ZP_08129668.1| ribosome recycling factor [Clostridium sp. D5]
 gi|324032026|gb|EGB93305.1| ribosome recycling factor [Clostridium sp. D5]
          Length = 183

 Score =  147 bits (370), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M  T+  L  ++ T+R GR +P +LD + V+ YG+  P+ QVANV+V E RM+
Sbjct: 5   LKVYEEKMTKTVENLNSELATIRAGRANPHVLDRLSVDYYGTPTPIQQVANVSVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K ++  +E+ I+ S++G+NP  +G  +R+  PE TEERR  LVK      E +K
Sbjct: 65  QIQPWEKSLLKEIEKAINMSDIGINPTNDGNTIRLVFPELTEERRKELVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRDG +  KK  K G+ SED +  LE  +QK+TD  I  +D   E K KE++
Sbjct: 125 VAVRNIRRDGNEAFKK-LKGGEISEDGIKDLEESLQKMTDKFIAKVDGCVETKSKEVL 181


>gi|293605059|ref|ZP_06687452.1| ribosome recycling factor [Achromobacter piechaudii ATCC 43553]
 gi|292816561|gb|EFF75649.1| ribosome recycling factor [Achromobacter piechaudii ATCC 43553]
          Length = 186

 Score =  147 bits (370), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  LK ++  +RTGR    +LD V+VE YGS VP+ QVANV +++ R + V  ++
Sbjct: 13  RMAKSLDTLKINLGKIRTGRAHTGILDHVQVEYYGSPVPVGQVANVNLVDARTISVQPYE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M   +E+ I ES+LGLNPI  G  +R+P+P  TEERR  L KV  +  E +KI+VRN+
Sbjct: 73  KHMAGPIEKAIRESDLGLNPISMGDTIRVPMPALTEERRRDLTKVVRSEGEDAKIAVRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+  + LKK  K  + SED     ++D+QK+TD ++ +ID    +K+ EIM
Sbjct: 133 RREANEALKKLVKDKEISEDDERRAQDDVQKLTDRSVADIDKMVVQKEAEIM 184


>gi|110834007|ref|YP_692866.1| ribosome recycling factor [Alcanivorax borkumensis SK2]
 gi|123050546|sp|Q0VQF4|RRF_ALCBS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110647118|emb|CAL16594.1| Ribosome recycling factor [Alcanivorax borkumensis SK2]
          Length = 185

 Score =  147 bits (370), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 111/176 (63%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + + RM  ++  L   M  +RTGR  PS+LD + +E YG+  PLNQ+ N++V E R L +
Sbjct: 8   DAQSRMKKSLEALDTAMKRVRTGRAHPSLLDNITIEYYGAETPLNQMGNISVEEGRTLTI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S +DK ++  +ER I  S+LGLNP   G ++R+P+P  TEE R  LVKV  A AE++++S
Sbjct: 68  SPFDKSLIPQIERAILMSDLGLNPSTSGTLIRLPLPPLTEETRRDLVKVVRAEAEQARVS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +RNIRRD    LK+  K  + SED     E  IQ++TD  +  ++   +EK++E+M
Sbjct: 128 IRNIRRDANSDLKELLKEKEISEDEQRRGEEQIQQLTDKMVAEVEGVLKEKEEELM 183


>gi|261400102|ref|ZP_05986227.1| ribosome recycling factor [Neisseria lactamica ATCC 23970]
 gi|269210329|gb|EEZ76784.1| ribosome recycling factor [Neisseria lactamica ATCC 23970]
          Length = 185

 Score =  147 bits (370), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS +P++QVANVT+L+ R
Sbjct: 4   DIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMIPVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFEGNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLTAKEEDLM 183


>gi|241760709|ref|ZP_04758801.1| ribosome recycling factor [Neisseria flavescens SK114]
 gi|241318890|gb|EER55416.1| ribosome recycling factor [Neisseria flavescens SK114]
          Length = 185

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 110/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  LK ++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + V  ++
Sbjct: 12  KMQRSLEVLKDNLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIGVKPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++S+RN+
Sbjct: 72  SNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 132 RRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLAAKEEDLM 183


>gi|172038505|ref|YP_001805006.1| ribosome recycling factor [Cyanothece sp. ATCC 51142]
 gi|226749927|sp|B1X0Q1|RRF_CYAA5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|171699959|gb|ACB52940.1| ribosome recycling factor [Cyanothece sp. ATCC 51142]
          Length = 182

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++K+ M  ++   ++   T+RTGR + S+LD V VE YG+  PL Q+AN++  +   +
Sbjct: 3   LDDLKENMQKSVEATQRSFNTIRTGRANASILDRVTVEYYGTETPLYQLANISTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +  +E+ I  S++GL P  +GQV+R+ +P  TEERR  LVK+A   AE+ K
Sbjct: 63  MIQPYDKGSMGQIEKAIQMSDVGLTPNNDGQVIRLNIPPLTEERRKDLVKLASKMAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD +D ++K  K+   SED    L++DIQK+TD     ID     K+K+IM
Sbjct: 123 VAIRNIRRDAIDDVRKQEKNSDISEDESRGLQDDIQKVTDQFTDKIDELLAAKEKDIM 180


>gi|163849097|ref|YP_001637141.1| ribosome recycling factor [Chloroflexus aurantiacus J-10-fl]
 gi|222527070|ref|YP_002571541.1| ribosome recycling factor [Chloroflexus sp. Y-400-fl]
 gi|189044049|sp|A9WAG2|RRF_CHLAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809502|sp|B9LEM3|RRF_CHLSY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|163670386|gb|ABY36752.1| ribosome recycling factor [Chloroflexus aurantiacus J-10-fl]
 gi|222450949|gb|ACM55215.1| ribosome recycling factor [Chloroflexus sp. Y-400-fl]
          Length = 185

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 110/164 (67%)

Query: 21  LKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE 80
           L+  + ++RTGR S ++++ + VEAYG  +PLNQ+AN++V EPR++V+  +D  M+ ++E
Sbjct: 20  LRHHLASIRTGRASSALVEHLHVEAYGMTMPLNQLANISVPEPRLIVIQPYDANMIKAIE 79

Query: 81  RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           + I +S+LGLNP  +G+V+R+PVP  TEERR  LVK+     E+ KISVRN RRD +D L
Sbjct: 80  KAIQQSDLGLNPSNDGRVIRLPVPPLTEERRRELVKMVRHRVEEVKISVRNQRRDAIDDL 139

Query: 141 KKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KK       SED +   +  IQ++TD   + +D    EK+ E+M
Sbjct: 140 KKLEAEKLISEDELHRGQERIQQLTDRCTRELDQIGAEKEAEVM 183


>gi|325270332|ref|ZP_08136937.1| ribosome recycling factor [Prevotella multiformis DSM 16608]
 gi|324987276|gb|EGC19254.1| ribosome recycling factor [Prevotella multiformis DSM 16608]
          Length = 207

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 121/191 (63%), Gaps = 8/191 (4%)

Query: 1   MNQVIDLQNIK-------DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLN 53
           +N  ID+ ++K       +RM     +L  ++  +R GR + ++LD V+V++YGS VPLN
Sbjct: 16  INSTIDMLDVKQTLKDAGERMEMAAMYLGDELQRIRAGRANVAILDGVRVDSYGSKVPLN 75

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLA 113
           QVA V V + R + +  WD++ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  
Sbjct: 76  QVATVMVPDARTIAIKPWDRKAIKDIEKAIMDSDVGITPENNGEMIRLNLPQPTEERRRE 135

Query: 114 LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           LVK  +   E++K+ +RN+R D  D LKK+ K G  SED     END+QKI D  IK +D
Sbjct: 136 LVKQCNKIGERTKVEIRNVRSDIKDKLKKAIKDG-LSEDNEKDAENDLQKIHDKYIKQVD 194

Query: 174 SFFEEKKKEIM 184
           +  +EK+KEIM
Sbjct: 195 ALLDEKQKEIM 205


>gi|227892608|ref|ZP_04010413.1| ribosome recycling factor [Lactobacillus ultunensis DSM 16047]
 gi|227865593|gb|EEJ73014.1| ribosome recycling factor [Lactobacillus ultunensis DSM 16047]
          Length = 185

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  ++ M  +I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQENMDKSIKVYQKKLASIRAGVANAALLDNVEVEYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  + ++E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQSSLDNIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RRD M+ LK+  K+G  +ED   +LE  +QK+TD   K ID   ++K+KEI  
Sbjct: 126 IAVRNVRRDAMNSLKRDEKNGDITEDEQRNLEKQVQKVTDDAAKKIDQLADDKRKEITQ 184


>gi|146328643|ref|YP_001209628.1| ribosome recycling factor [Dichelobacter nodosus VCS1703A]
 gi|166230785|sp|A5EV26|RRF_DICNV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146232113|gb|ABQ13091.1| ribosome recycling factor [Dichelobacter nodosus VCS1703A]
          Length = 185

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 80/186 (43%), Positives = 114/186 (61%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M Q I L++ + RM  ++  L+ D+  +RTGR + S+LD ++VE YG+ VPL+Q ANV V
Sbjct: 1   MTQEI-LKDTQSRMKKSVQTLEADLTKIRTGRANVSLLDHIEVEYYGAMVPLSQAANVNV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L + +W+++MVA +E+ I  S+LGL P   GQ + I +P  TEERR  +VKV   
Sbjct: 60  TDHRTLSIQIWERDMVAKIEKAIINSDLGLTPNTAGQNIHINLPPLTEERRKEMVKVVKN 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++KI+VRNIRRD    L K     + SED     E +IQKITD  +  ID     K+
Sbjct: 120 EGEQAKIAVRNIRRDANQSLSKLLTQKEISEDEQRKSEEEIQKITDHFVAEIDKVLMAKE 179

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 180 KELMEL 185


>gi|94676465|ref|YP_588960.1| ribosome recycling factor [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|190360234|sp|Q1LSV4|RRF_BAUCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|94219615|gb|ABF13774.1| ribosome recycling factor [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 185

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM   +   K ++  LRTGR +P++LD +KV+ YGS +PL Q+AN+ V + R LV
Sbjct: 7   QDAEVRMEKCLETFKNNISKLRTGRANPNLLDNIKVDYYGSIMPLRQLANIIVEDTRTLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++++D+ ++  VE+ I  S+LGL P + G ++R+ +P  TEERR  L+K+    AE+ KI
Sbjct: 67  ITLFDQSIIKRVEKAIIISDLGLTPDLSGTIIRVQLPSLTEERRRNLIKIVRNEAEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD  DH+K   K+   S D     +++IQKIT++ I+ +D    EK++E++ F
Sbjct: 127 SVRNIRRDANDHIKILLKNKAISIDEERRSQSEIQKITEAWIRRLDQILSEKERELIDF 185


>gi|225021116|ref|ZP_03710308.1| hypothetical protein CORMATOL_01128 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946116|gb|EEG27325.1| hypothetical protein CORMATOL_01128 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 205

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ M  T+   ++++ T+RTGR +P+M + V  + YG   P+ Q+A V+V E RM+
Sbjct: 26  LLECEEHMSTTVDRTREELTTIRTGRANPAMFNGVVADYYGVPTPITQMATVSVPEARMM 85

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++  M+  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A +  E  K
Sbjct: 86  LIKPYEMSMMGVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMVKLAKSKGEDGK 145

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RN+RR GMD LKK  K G A ED V + E ++ K+T   +  +D   ++K+ E+M
Sbjct: 146 IAIRNVRRKGMDQLKKIHKDGDAGEDEVQAAEKELDKVTQKYVAAVDEVVQKKEAELM 203


>gi|297571182|ref|YP_003696956.1| ribosome recycling factor [Arcanobacterium haemolyticum DSM 20595]
 gi|296931529|gb|ADH92337.1| ribosome recycling factor [Arcanobacterium haemolyticum DSM 20595]
          Length = 185

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++MG  I   + D   +R+GR +P +   + V+ YG+  PL Q+A V+V E R +
Sbjct: 6   LLEAEEKMGKAIEVAQSDFSKIRSGRANPELFTSLVVDYYGAPTPLQQLATVSVPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D+  +  +ER I ES+LG+NP  +GQVLRI +P  TEERR   VK+A   AE ++
Sbjct: 66  LISPYDRSAMKDIERAIQESDLGVNPTDDGQVLRINLPALTEERRREYVKLAKGKAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R IRR   + L K +K G A ED V   E +++ +T   ++N+DS  E K+KE+M  
Sbjct: 126 ISIRAIRRKAKETLDKIKKDGDAGEDDVERAEKELESLTKKFVENVDSLLESKEKELMEI 185


>gi|257061312|ref|YP_003139200.1| ribosome recycling factor [Cyanothece sp. PCC 8802]
 gi|256591478|gb|ACV02365.1| ribosome recycling factor [Cyanothece sp. PCC 8802]
          Length = 181

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 116/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++D M  ++   ++   T+RTGR + S+LD V VE YG   PLNQ+AN+T  +   +
Sbjct: 2   LAELEDNMQKSVEATQRSFNTIRTGRANASLLDRVIVEYYGMETPLNQLANITTPDATTI 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK  + ++E+ I+ S+LGL P  +G+V+R+ +P  TEERR  LVK+A   AE+ K
Sbjct: 62  NILPYDKGSMGAIEKAINLSDLGLTPNNDGKVIRLNIPPLTEERRKELVKLAGKLAEEGK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRDG+D ++K  K+   SED   +L+++IQKITD     ID   + K+K+IM
Sbjct: 122 VAIRNIRRDGIDTVRKQEKNNDISEDESRNLQDEIQKITDKFTTKIDELLKVKEKDIM 179


>gi|325281134|ref|YP_004253676.1| Ribosome-recycling factor [Odoribacter splanchnicus DSM 20712]
 gi|324312943|gb|ADY33496.1| Ribosome-recycling factor [Odoribacter splanchnicus DSM 20712]
          Length = 187

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 109/174 (62%), Gaps = 1/174 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M + +  L+ ++  +R G+ +P +L+ V V+ YGS  PL+QVAN+T  +PR + V  
Sbjct: 13  KEQMQNALVHLENELAKIRAGKANPKILNDVLVDYYGSPTPLSQVANITAPDPRTIAVQP 72

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K M+  +++ I  +NLG NP   G+V+RI VP  T ERR  LVK +    E +K+S+R
Sbjct: 73  WEKNMLGPIQKAIMNANLGFNPDNNGEVVRINVPPLTAERRKELVKQSKGVGETAKVSIR 132

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N RRD +D  KK  KSG   ED     E+++QKITDS  K ID     K+K+IM
Sbjct: 133 NARRDAIDEFKKMVKSG-LPEDEAKDAEDEVQKITDSYNKKIDEILTAKEKDIM 185


>gi|303236901|ref|ZP_07323480.1| ribosome recycling factor [Prevotella disiens FB035-09AN]
 gi|302483069|gb|EFL46085.1| ribosome recycling factor [Prevotella disiens FB035-09AN]
          Length = 186

 Score =  147 bits (370), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 116/178 (65%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM     +L + +  +R GR + ++LD V+V +YGS VPLNQVA+VTV +PR +
Sbjct: 8   LSEAEERMEMAAMYLDEQLQRIRAGRANVAILDGVRVNSYGSVVPLNQVASVTVPDPRTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK ++   E++K
Sbjct: 68  AIKPWDKKAIKDIEKAIMDSDVGITPDNNGEIIRLSLPQPTEERRRDLVKQSNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VRN+R D  D  KK+ K G  SED+    E ++QKI D  IK ID+   EK+KEIM
Sbjct: 128 VEVRNVRSDIKDKFKKAIKDG-LSEDLEKDAEEELQKIHDKYIKKIDALLVEKEKEIM 184


>gi|89092092|ref|ZP_01165047.1| ribosome recycling factor [Oceanospirillum sp. MED92]
 gi|89083827|gb|EAR63044.1| ribosome recycling factor [Oceanospirillum sp. MED92]
          Length = 185

 Score =  147 bits (370), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+  +RM  ++  L  +   +RTGR  PS+L+ ++V  YGS VPL+QVAN++V + R L 
Sbjct: 7   QDATERMQKSVEALVNNFKKIRTGRAHPSILEGIQVSYYGSDVPLSQVANISVEDGRTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  W+K MV  +E+ I  S+LGLNP   G+ +R+P+P  TEE R   +K A A AE +++
Sbjct: 67  IVPWEKPMVPVIEKAIMTSDLGLNPATAGENIRVPMPPLTEETRKGYIKQARAEAENARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + +ED     E+ +QKITD  +  +DS  E+K+K++M  
Sbjct: 127 AIRNIRRDANGDLKDLLKEKEITEDDQRRGEDQVQKITDKHVAEVDSLLEQKEKDLMEI 185


>gi|327392800|dbj|BAK10222.1| ribosome recycling factor Frr [Pantoea ananatis AJ13355]
          Length = 173

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 111/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D+
Sbjct: 1   MDKCVEAFKTTISKVRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            +  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ ++SVRN+R
Sbjct: 61  SLGPAVEKAIMASDLGLNPNSAGSDIRVPLPALTEERRKDLIKIVRGEAEQGRVSVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SED     +++IQK+TD+ IK +D+   EK+ E+M F
Sbjct: 121 RDANDKIKALLKDKEISEDDERRSQDEIQKMTDAHIKKVDAALAEKEAELMDF 173


>gi|284044967|ref|YP_003395307.1| ribosome recycling factor [Conexibacter woesei DSM 14684]
 gi|283949188|gb|ADB51932.1| ribosome recycling factor [Conexibacter woesei DSM 14684]
          Length = 185

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ ++RM  ++   + +  ++RTGR +P++LD + VE YG++ PL Q+A +   E RML
Sbjct: 6   LQDARERMSKSVESTRHEFGSVRTGRATPALLDRIMVEYYGANTPLKQLATINAPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  +DK  + ++E+ I ES++GL P  +G ++R+ +PE TEERR  LVKV    AE+ +
Sbjct: 66  SVQPFDKSSIKAIEKAIMESDVGLTPNNDGNLIRLSIPELTEERRRQLVKVVRNIAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I +RN+RRD M  L++ R +G+   D     E ++QK+TD  +  +++F + K++EI+ 
Sbjct: 126 IGIRNVRRDTMHDLRELRDAGEVGADDEHRAEAELQKLTDEKVGELETFLKNKEEEILE 184


>gi|295098990|emb|CBK88079.1| ribosome recycling factor [Eubacterium cylindroides T2-87]
          Length = 181

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 116/176 (65%), Gaps = 3/176 (1%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM   I  L+ ++ T+RTGR S  +L+ V+V+ YGS +P+NQ++++ V+E   LVV  
Sbjct: 9   EERMLKAIENLESNLKTIRTGRASSQILERVQVDYYGSMMPINQLSSIQVVEGTQLVVKP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D+ ++ SV   I  +NLGLNP VE  V+RI VP+ T+ERR  L K A  Y E++K+++R
Sbjct: 69  YDRSIIKSVGHAIQAANLGLNPQVEADVIRILVPQLTQERREQLAKDAQKYGEEAKVAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD  D  KK+++     +D  A LE D QK+TD  IK ++    EKKKEI++ 
Sbjct: 129 NIRRDANDATKKNKEL--TEDDRKAELE-DSQKLTDDYIKQVEQIVNEKKKEILNV 181


>gi|325957056|ref|YP_004292468.1| ribosome recycling factor [Lactobacillus acidophilus 30SC]
 gi|325333621|gb|ADZ07529.1| ribosome recycling factor [Lactobacillus acidophilus 30SC]
          Length = 185

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  ++ M  +I   +K + ++R G  + ++LD V+V+ YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQENMDKSIKVYQKKLASIRAGVANAALLDNVQVQYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RRD M+ LK+  K G  +ED   +LE  +QK+TD   K ID   +EK+KEI  
Sbjct: 126 IAVRNVRRDAMNSLKREEKDGDITEDEQRNLEKQVQKVTDDAAKKIDQLADEKRKEITQ 184


>gi|325267098|ref|ZP_08133767.1| ribosome recycling factor [Kingella denitrificans ATCC 33394]
 gi|324981451|gb|EGC17094.1| ribosome recycling factor [Kingella denitrificans ATCC 33394]
          Length = 185

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 112/174 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M  ++  L++++  +RTGR    +LD V VE +GS VP++QV NVT+L+ R + V  
Sbjct: 10  ENKMQRSLEVLRENLAKVRTGRAHTGLLDQVTVEYWGSEVPVSQVGNVTLLDARTIGVKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++  M A +E+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE  ++S+R
Sbjct: 70  FESNMAAKIEKAIRDSNLGLNPSSVGDLIRVPMPMLTEERRKDLIKVVRGEAEDGRVSIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N+RRD  DH+KK  K  + SED     E  +QK+TD  I ++D     K++++M
Sbjct: 130 NVRRDANDHVKKLLKDKEISEDEARRAEESVQKLTDKYIADVDKMLAAKEEDLM 183


>gi|332532243|ref|ZP_08408124.1| ribosome recycling factor [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038341|gb|EGI74786.1| ribosome recycling factor [Pseudoalteromonas haloplanktis ANT/505]
          Length = 185

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 112/182 (61%), Gaps = 1/182 (0%)

Query: 6   DLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q + + RM  +++ L   +  +RTGR  P++LD + V  YG+  PLNQVANVT+ + R
Sbjct: 4   DIQKDAQARMQKSVTALGSQLSKIRTGRAHPAILDGIMVSYYGAPTPLNQVANVTIEDSR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L + V+DK +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+K+     E 
Sbjct: 64  TLAIGVFDKSLAQAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKIVRGEVEG 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++++RNIRRD    +K   K  + SED     ++ IQK+TD  IK +D+    K+ E+M
Sbjct: 124 GRVAIRNIRRDANGDVKGLLKDKEISEDEARQSDDAIQKLTDKFIKEMDTLLAAKEAELM 183

Query: 185 HF 186
             
Sbjct: 184 EI 185


>gi|218283542|ref|ZP_03489532.1| hypothetical protein EUBIFOR_02122 [Eubacterium biforme DSM 3989]
 gi|218215810|gb|EEC89348.1| hypothetical protein EUBIFOR_02122 [Eubacterium biforme DSM 3989]
          Length = 181

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 113/180 (62%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M   I  L+ ++  +RTGR S  ML+ V+VE YG+  P+NQ+A ++V+E   L
Sbjct: 5   LLNAEEKMMGAIDNLESNLRQIRTGRASGQMLERVQVEYYGAMTPINQIAQISVVEGTQL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +D+ +V  +   I  +NLGLNP  E  V+RI VP+ TE+RR  L K A  Y E++K
Sbjct: 65  VVKPYDRSIVKGIAHAIQAANLGLNPQAEADVIRIQVPQLTEDRRKELAKDAQKYGEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRD  D +KK +   +  ED       + QK+TD  IK++DS  E KKKEI++ 
Sbjct: 125 VAIRNVRRDANDAIKKDK---ELPEDEKKQTLEESQKLTDKYIKDVDSITETKKKEILNV 181


>gi|325282615|ref|YP_004255156.1| Ribosome-recycling factor [Deinococcus proteolyticus MRP]
 gi|324314424|gb|ADY25539.1| Ribosome-recycling factor [Deinococcus proteolyticus MRP]
          Length = 183

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 117/177 (66%), Gaps = 3/177 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG +I  L+ ++  LRTGR +P +L  V VE +GS +P++QVA++   + R L 
Sbjct: 9   KDARERMGKSIEALESNLGVLRTGRANPGILKKVMVEYFGSTMPIDQVASINAPDARTLT 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ WD+  +  +E+ I +S+LGLNP  +G ++ I +P  TEERR  +VK A +YAE+++I
Sbjct: 69  VTPWDRGALNPIEKAIRDSDLGLNPNNKGDMIFISIPALTEERRKEMVKNAKSYAEEARI 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RN+R+  +D +KK    G   ED V   E ++QKITD  +K +D  F+ K+ EI+
Sbjct: 129 SIRNVRKSALDEVKKLDDLG---EDEVKRAEAEVQKITDEYVKKVDEVFDRKEAEIL 182


>gi|238759946|ref|ZP_04621100.1| Ribosome-recycling factor [Yersinia aldovae ATCC 35236]
 gi|238701853|gb|EEP94416.1| Ribosome-recycling factor [Yersinia aldovae ATCC 35236]
          Length = 185

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 114/174 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L ++V+D
Sbjct: 12  RMEKCLEAFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++S+RN+
Sbjct: 72  RSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  + +K   K  + SED     ++D+QK+TD+ IK +D+    K+ E+M F
Sbjct: 132 RRDANEKVKALLKDKEISEDEDRRSQDDVQKLTDAFIKKVDAALAAKEAELMSF 185


>gi|259907545|ref|YP_002647901.1| ribosome recycling factor [Erwinia pyrifoliae Ep1/96]
 gi|224963167|emb|CAX54651.1| Ribosome recycling factor [Erwinia pyrifoliae Ep1/96]
 gi|283477385|emb|CAY73301.1| frr [Erwinia pyrifoliae DSM 12163]
          Length = 185

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 110/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + V+ YGS  PL  +A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFKNHISKIRTGRASPSILDGIMVDYYGSATPLRLLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+
Sbjct: 72  RSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D LK   K  + SED     + D+QK+TD  IK +D+   +K+ E+M F
Sbjct: 132 RRDANDKLKALLKDKEISEDDDRRAQEDVQKMTDIFIKKMDASLADKETELMDF 185


>gi|325853886|ref|ZP_08171402.1| ribosome recycling factor [Prevotella denticola CRIS 18C-A]
 gi|327313933|ref|YP_004329370.1| ribosome recycling factor [Prevotella denticola F0289]
 gi|325484223|gb|EGC87153.1| ribosome recycling factor [Prevotella denticola CRIS 18C-A]
 gi|326945432|gb|AEA21317.1| ribosome recycling factor [Prevotella denticola F0289]
          Length = 186

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 115/178 (64%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM     +L  ++  +R GR + ++LD V+V++YGS VPLNQVA V V + R +
Sbjct: 8   LNDAGERMEMAAMYLGDELQRIRAGRANVAILDGVRVDSYGSKVPLNQVATVMVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIKPWDRKAIKDIEKAIMDSDVGITPENNGEMIRLNLPQPTEERRRELVKQCNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + +RN+R D  D LKK+ K G  SED     END+QK+ D  IK +D+  EEK+KEIM
Sbjct: 128 VEIRNVRSDIKDKLKKAIKDG-LSEDNEKDAENDLQKLHDKYIKQVDALLEEKQKEIM 184


>gi|149928181|ref|ZP_01916426.1| ribosome recycling factor [Limnobacter sp. MED105]
 gi|149823072|gb|EDM82312.1| ribosome recycling factor [Limnobacter sp. MED105]
          Length = 186

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 111/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M  +I  LK D+  +RTGR    +LD V+V+ YGS VP++QVAN+++ + R +VV  
Sbjct: 11  EEKMVKSIESLKTDLQKVRTGRAHTGILDHVQVDYYGSMVPISQVANLSLADARTIVVQP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K M  +VE+ I ES+LGLNP   G+ +R+P+P  TEERR  L K      E++K+++R
Sbjct: 71  WEKNMANAVEKAIRESDLGLNPASMGETIRVPMPALTEERRKELTKFIKGEGEQTKVAIR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N+RRD  + LK+     + SED     + DIQK+TD  +  +D   + K+ EIM
Sbjct: 131 NLRRDANEALKRLVNDKEISEDDERRAQADIQKLTDKFVSEVDQVLQSKEAEIM 184


>gi|327183779|gb|AEA32226.1| ribosome recycling factor [Lactobacillus amylovorus GRL 1118]
          Length = 185

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  ++ M  +I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQENMDKSIKVYQKKLASIRAGVANAALLDNVQVEYYGAPTPLIQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RRD M+ LK+  K G  +ED   +LE  +QK+TD   K ID   +EK+KEI  
Sbjct: 126 IAVRNVRRDAMNSLKREEKDGDITEDEQRNLEKQVQKVTDGAAKKIDQLADEKRKEITQ 184


>gi|56459950|ref|YP_155231.1| ribosome recycling factor [Idiomarina loihiensis L2TR]
 gi|60390231|sp|Q5QXS3|RRF_IDILO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56178960|gb|AAV81682.1| Ribosome recycling factor [Idiomarina loihiensis L2TR]
          Length = 185

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/180 (43%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ KDRM  ++  L+  M  +RTGR  PS+LD V V  YG+  PL Q+AN+T  + R L
Sbjct: 6   IEDAKDRMEKSVESLRSQMSKVRTGRAHPSILDSVMVNYYGTDTPLKQLANITTEDSRTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++V+DK   A+VE+ I  S+LGLNP   G V+RIP+P  TEERR  LVK+  A AE  +
Sbjct: 66  ALTVFDKSASAAVEKAIINSDLGLNPASAGAVIRIPLPPLTEERRRDLVKIVRAEAENGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD    +K   K  + +ED   + E +IQK+TD  +K ID   + K+ ++M  
Sbjct: 126 IAVRNIRRDANGDIKDLLKEKEITEDEERNAEEEIQKLTDKFVKQIDEALKAKEADLMEI 185


>gi|149010411|ref|ZP_01831782.1| ribosome recycling factor [Streptococcus pneumoniae SP19-BS75]
 gi|147764892|gb|EDK71821.1| ribosome recycling factor [Streptococcus pneumoniae SP19-BS75]
          Length = 185

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S++G+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDIGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+I+     K+KE++ 
Sbjct: 126 VAVRNIRRDAMDEAKKREKAKEITEDELKTLEKDIQKVTDDAVKHINDMTANKEKELLE 184


>gi|309775654|ref|ZP_07670653.1| ribosome recycling factor [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916560|gb|EFP62301.1| ribosome recycling factor [Erysipelotrichaceae bacterium 3_1_53]
          Length = 180

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 112/178 (62%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++ L++D+ T+RTG    S+LD V+ E YGS  P+NQVA+V V+E R L
Sbjct: 4   LNHAEEKMKKAVTVLEEDLKTIRTGIAHASLLDHVQFEYYGSPTPINQVASVKVVEGRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D+  +  +ER I  S+ GL P  +G+V+R+ VP  TEERR  L K AH   E +K
Sbjct: 64  VIKPYDRGTLKDIERAIQTSDTGLVPQSDGEVIRLNVPSLTEERRKELAKAAHKMGEDAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD  D +KK +   + +ED+    +  IQK+TD   K ID   E K KEIM
Sbjct: 124 IAIRNIRRDANDAVKKDK---ELTEDLKKDAQEKIQKLTDKIGKTIDQAVENKAKEIM 178


>gi|323344896|ref|ZP_08085120.1| ribosome recycling factor [Prevotella oralis ATCC 33269]
 gi|323094166|gb|EFZ36743.1| ribosome recycling factor [Prevotella oralis ATCC 33269]
          Length = 186

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 115/178 (64%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM     +L + +  +R GR + ++LD V+V +YGS VPLNQVANV+V + R +
Sbjct: 8   LNDAEERMQMASMYLDESLSRIRAGRANVAILDSVRVSSYGSMVPLNQVANVSVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+GI +S++G+ P   G+++R+ +P+ TEERR  LVK  +   EK K
Sbjct: 68  AIRPWDKKAIKDIEKGIMDSDVGITPENNGEIIRLTIPQPTEERRKELVKQCNKIGEKVK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VRN+R +  + LKK+ K G  SED     E+ +QKI D  IKNID+   EK KEIM
Sbjct: 128 VEVRNVRSEIKEKLKKAIKEG-LSEDNEKDAEDSLQKIHDKYIKNIDALLAEKTKEIM 184


>gi|313901163|ref|ZP_07834651.1| ribosome recycling factor [Clostridium sp. HGF2]
 gi|312954121|gb|EFR35801.1| ribosome recycling factor [Clostridium sp. HGF2]
          Length = 180

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 115/178 (64%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++ L++D+ T+RTG    S+LD V+ E YGS  P+NQVA+V V+E R L
Sbjct: 4   LNHAEEKMKKAVAVLEEDLKTIRTGIAHASLLDHVQFEYYGSPTPINQVASVKVVEGRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D+  +  +ER I  S+ GL P  +G+V+R+ VP  TEERR  L K AH   E++K
Sbjct: 64  VIKPYDRGTLKDIERAIQTSDTGLVPQSDGEVIRLNVPALTEERRKELAKSAHKMGEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD  D +KK +   + +ED+    +  IQK+TD   K+IDS  + K KEIM
Sbjct: 124 IAIRNIRRDANDAVKKDK---ELTEDLKKDAQEKIQKLTDKIGKSIDSAVDTKAKEIM 178


>gi|260888303|ref|ZP_05899566.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
 gi|330838370|ref|YP_004412950.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
 gi|260861839|gb|EEX76339.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
 gi|329746134|gb|AEB99490.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
          Length = 185

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 114/174 (65%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  T+  L++D  +LR GR +P++LD V V+ YG   P++QVA + V EPRML+++ W
Sbjct: 11  ERMKKTLEALRRDFGSLRAGRATPALLDRVMVDYYGQPTPVSQVAAIAVPEPRMLMITPW 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K ++  +E+ I +S+LGL P  +G  +R+ +P+ T+ERR  LVK  +   E +K+++RN
Sbjct: 71  EKTILHDIEKAIMKSDLGLTPNSDGTAVRLSIPQLTQERRTELVKSLNKKTEDAKVAIRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IRRD  + +KK  K+ + +ED     ++D+QK+ D  IK +D     K+KEIM 
Sbjct: 131 IRRDANEQMKKLEKAKEITEDDAKKGQDDMQKLVDKYIKAVDDARVVKEKEIME 184


>gi|260437176|ref|ZP_05790992.1| ribosome recycling factor [Butyrivibrio crossotus DSM 2876]
 gi|292810489|gb|EFF69694.1| ribosome recycling factor [Butyrivibrio crossotus DSM 2876]
          Length = 184

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  +   L  D +T+R GR +P +LD +KV+ YG+  P  QVANV+V E RM+
Sbjct: 5   IKTYEEKMIKSCDTLAADYVTIRAGRANPHILDKLKVDYYGTPTPFQQVANVSVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++  +E+ I  S+LGL P  +G+V+R+  PE TE+RR  LVK      E +K
Sbjct: 65  QIQPWETSLLKEIEKAILMSDLGLTPTNDGKVIRLVFPELTEDRRKELVKDIKKKGENTK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD  D +KK  K    SED V   E+ IQK+TD  +  +D   +EK KEIM
Sbjct: 125 VAIRNIRRDANDAIKKLSKDTDMSEDEVKKNEDSIQKLTDKYVAQVDKMIDEKSKEIM 182


>gi|319638835|ref|ZP_07993593.1| ribosome-recycling factor [Neisseria mucosa C102]
 gi|317399739|gb|EFV80402.1| ribosome-recycling factor [Neisseria mucosa C102]
          Length = 185

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R
Sbjct: 4   DIQKTAEGKMQRSLEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M + VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFESNMASKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLAAKEEDLM 183


>gi|190360294|sp|A9M3S1|RRF_NEIM0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|325131044|gb|EGC53769.1| ribosome recycling factor [Neisseria meningitidis OX99.30304]
          Length = 185

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 110/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + V  ++
Sbjct: 12  KMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIGVKPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             M   VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++S+RN+
Sbjct: 72  GNMAVKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 132 RRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLMAI 185


>gi|119471164|ref|ZP_01613696.1| ribosome releasing factor [Alteromonadales bacterium TW-7]
 gi|119445820|gb|EAW27102.1| ribosome releasing factor [Alteromonadales bacterium TW-7]
          Length = 185

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 111/182 (60%), Gaps = 1/182 (0%)

Query: 6   DLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q + + RM  +++ L   +  +RTGR  P++LD + V  YG+  PLNQVANVT+ + R
Sbjct: 4   DIQKDAQARMQKSVTALGSQLSKIRTGRAHPAILDGIMVSYYGAPTPLNQVANVTIEDSR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L + V+DK +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+K+     E 
Sbjct: 64  TLAIGVFDKSLAQAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKIVRGEVEG 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++++RNIRRD    +K   K    SED     E+ IQK+TD  IK +D+    K+ E+M
Sbjct: 124 GRVAIRNIRRDANGDIKALLKDKDISEDEARQGEDAIQKLTDKFIKEMDTQLTAKEAELM 183

Query: 185 HF 186
             
Sbjct: 184 EI 185


>gi|323489579|ref|ZP_08094806.1| ribosome recycling factor [Planococcus donghaensis MPA1U2]
 gi|323396710|gb|EGA89529.1| ribosome recycling factor [Planococcus donghaensis MPA1U2]
          Length = 185

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 111/173 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M + I    +D+ ++R GR +PS+LD + ++ YGS  P+NQVA +++ E R++++  +D
Sbjct: 12  KMNNAIQAFSRDLASIRAGRATPSILDKLTIDYYGSPTPVNQVAGISIPEARLIMIQPYD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  +E+ I +S+LGL+P  +G V+R+ VP  TEERR  LVK     AE++KI +RNI
Sbjct: 72  KSVLGDIEKAILKSDLGLSPSNDGSVIRLAVPALTEERRKDLVKQVKKEAEEAKIGIRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD  D  KK  K  + + D +    +D+QK+TD  I  ID   ++K+K IM 
Sbjct: 132 RRDANDEFKKLEKKSEITVDDLRGYSDDVQKLTDDNIAKIDEMAKDKEKGIME 184


>gi|258545341|ref|ZP_05705575.1| ribosome recycling factor [Cardiobacterium hominis ATCC 15826]
 gi|258519444|gb|EEV88303.1| ribosome recycling factor [Cardiobacterium hominis ATCC 15826]
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  L+ ++  +RTGR + S+LD V+VE YGS VPL+Q ANVTV + R L + VW+
Sbjct: 12  RMEKSVKSLEHELSKIRTGRANVSLLDHVQVEYYGSMVPLSQAANVTVTDYRSLTIQVWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MVA +E+ +  S+LGL P   GQ + I +P  TEERR  LVK+     E++K+++RN+
Sbjct: 72  RNMVAVIEKALINSDLGLTPNTAGQNIHINLPPLTEERRKDLVKIVRNEGEQAKVAIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD    +K+     +ASED     E +IQK+TD  ++ +D    EK+KE+M  
Sbjct: 132 RRDANQSVKQLVTDKQASEDDERRAEAEIQKLTDKYVEQVDKVLAEKEKELMEV 185


>gi|312143676|ref|YP_003995122.1| ribosome recycling factor [Halanaerobium sp. 'sapolanicus']
 gi|311904327|gb|ADQ14768.1| ribosome recycling factor [Halanaerobium sp. 'sapolanicus']
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 111/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++RM   +   K+D+ T+RTGR  PS+++ +K   YG   P+ Q+A V   E R +
Sbjct: 6   LKETEERMKKALEATKEDLNTIRTGRARPSLVENIKANNYGVATPIQQMAKVMAPEARQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  + ++E+ I + NLGLNP  +G V+RI +P+ TEERR  L K+ H  AE  K
Sbjct: 66  VIEPWDKNNIEAIEKAIMQENLGLNPSNDGNVIRINIPQLTEERRKELTKILHKKAEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RNIRRD  + L+     G+ SED +    +++Q +TD+ I  I+S  E+K+ EIM 
Sbjct: 126 IAIRNIRRDANEELEMLEDEGEISEDNMHRGFDNVQDLTDTYIGKIESITEKKENEIME 184


>gi|118617645|ref|YP_905977.1| ribosome recycling factor [Mycobacterium ulcerans Agy99]
 gi|166230805|sp|A0PQ87|RRF_MYCUA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118569755|gb|ABL04506.1| ribosome recycling factor Frr [Mycobacterium ulcerans Agy99]
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  ++DM T+RTGR +P M   + ++ YG+H P+ Q+A++ V E RM+
Sbjct: 6   LFDAEEKMEKAVSVAREDMATIRTGRANPGMFSRIVIDYYGTHTPITQLASINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A    E+++
Sbjct: 66  VIKPYEANQLHAIETAIRNSDLGVNPTNDGTIIRVAVPQLTEERRRDLVKQAKHKGEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRNIRR  M+ L + RK G+A ED VA  E D+ K T   +  ID   + K+ +++
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVARAEKDLDKSTHQYVAQIDELVKHKEGDLL 183


>gi|86605415|ref|YP_474178.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
 gi|86553957|gb|ABC98915.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
          Length = 182

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 115/182 (63%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++L  I++ M   +   ++   T+RTGR + S+LD ++VE YG   PL  +A++T  +  
Sbjct: 1   MELAEIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSS 60

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L++  +D   +A++ER I  S+LGL P  +G+V+R+ +P  TEERR  L K     AE+
Sbjct: 61  TLLIQPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEE 120

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RNIRRDG+D ++K  K+G+ SED   SL++ IQK+TD  IK ID    EK+KE+ 
Sbjct: 121 GRVSIRNIRRDGIDSVRKREKNGELSEDESKSLQDAIQKLTDRYIKKIDELLAEKEKELT 180

Query: 185 HF 186
             
Sbjct: 181 TL 182


>gi|322392100|ref|ZP_08065562.1| ribosome recycling factor [Streptococcus peroris ATCC 700780]
 gi|321145000|gb|EFX40399.1| ribosome recycling factor [Streptococcus peroris ATCC 700780]
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 113/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHHSLAREFGGIRAGRANASLLDRITVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD MD  KK  K+ + +ED + +LE +IQK TD  +K+ID     K+KEI+ 
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKEIQKATDDAVKHIDDMTANKEKEILE 184


>gi|288800846|ref|ZP_06406303.1| ribosome recycling factor [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288332307|gb|EFC70788.1| ribosome recycling factor [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 186

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 114/178 (64%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM     +L++ +  +R GR + ++LD V+V +YGS VPLNQVANV+  +PR +
Sbjct: 8   LTDAGERMEMAALYLEEQLSRIRAGRANIAILDGVRVSSYGSMVPLNQVANVSAPDPRTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ WDK+ +  +E+ I +S++G+ P   G+V+R+ +P+ TEERR  L K  +   EK K
Sbjct: 68  AIAPWDKKTIRDIEKAIMDSDVGITPENNGEVIRLNIPQPTEERRRELAKQCNKIGEKIK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I VRN+R D  D LKK+ K G  SED     EN++QKI D  IK ++    EK+KEIM
Sbjct: 128 IEVRNVRSDIKDKLKKAIKDG-LSEDNEKDAENELQKIHDKYIKRVEDLLAEKEKEIM 184


>gi|291550817|emb|CBL27079.1| ribosome recycling factor [Ruminococcus torques L2-14]
          Length = 183

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 111/173 (64%), Gaps = 1/173 (0%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           D+M  TI+ L  ++ T+R GR +P +LD + V+ YG+  P+ QVANV+V E RM+ +  W
Sbjct: 10  DKMTKTINNLDGELATIRAGRANPHVLDKLAVDYYGTPTPIQQVANVSVPEARMIQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K M+ ++E+ I  S++G+NP  +G  +R+  PE TE+RR  L K      E++K++VRN
Sbjct: 70  EKSMLKAIEKAILTSDIGINPTNDGTSIRLVFPELTEDRRKELAKDVKKKGEEAKVAVRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +RRDG    KK  K  + SED +  LE+++QKITD  +  ID   E K KEIM
Sbjct: 130 VRRDGNVAFKK-LKGTEISEDEIKDLEDELQKITDKYVAKIDKMVEAKSKEIM 181


>gi|289423559|ref|ZP_06425360.1| ribosome recycling factor [Peptostreptococcus anaerobius 653-L]
 gi|289156061|gb|EFD04725.1| ribosome recycling factor [Peptostreptococcus anaerobius 653-L]
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 116/175 (66%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++++M  TI  LK +  T+R GR + SMLD V+V+ YG+  P+NQ+A V V E R+L ++
Sbjct: 9   LEEQMEKTIEALKFEFGTIRAGRANASMLDKVRVDYYGTPTPVNQMAAVAVSEGRVLTIT 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++ ++E+ I +S++G+ P  +G V+R+ VP+ TEERR  L K A+  +E  K+ +
Sbjct: 69  PWDKSVIHAIEKAISDSDIGIAPSNDGSVIRLTVPQLTEERRKELAKKANKASESFKVRI 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RN RRD  D +KK  K+ + +ED      +++QK+TD  IK ID   +EK+K+I+
Sbjct: 129 RNERRDANDKIKKMEKAAELTEDDAKKATDEVQKMTDKYIKVIDQLTDEKEKDIL 183


>gi|238792752|ref|ZP_04636383.1| Ribosome-recycling factor [Yersinia intermedia ATCC 29909]
 gi|238727860|gb|EEQ19383.1| Ribosome-recycling factor [Yersinia intermedia ATCC 29909]
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 113/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM       +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L ++V+D
Sbjct: 12  RMEKCFEAFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++S+RN+
Sbjct: 72  RSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  + +K   K  + SED     ++D+QK+TD+ IK +D+    K+ E+M F
Sbjct: 132 RRDANEKVKALLKDKEISEDEDRRSQDDVQKLTDAFIKKVDAALAAKEAELMDF 185


>gi|77360957|ref|YP_340532.1| ribosome releasing factor [Pseudoalteromonas haloplanktis TAC125]
 gi|76875868|emb|CAI87089.1| ribosome releasing factor [Pseudoalteromonas haloplanktis TAC125]
          Length = 173

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/173 (42%), Positives = 103/173 (59%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +++ L   +  +RTGR  P++LD + V  YGS  PLNQVANVT+ + R L + V+DK
Sbjct: 1   MQKSVAALGSQLSKIRTGRAHPALLDGIMVSYYGSPTPLNQVANVTIEDSRTLAIGVFDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+K+     E  +++VRNIR
Sbjct: 61  SLAQAVEKAIMASDLGLNPMSAGSVIRVPLPALTEERRKNLIKIVRGEVEGGRVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD     K   K    SED     E  IQK+TD  IK +D+    K+ E+M  
Sbjct: 121 RDANGDFKNLLKDKDISEDEARQAEEAIQKMTDKFIKEMDTQLAAKEAELMEI 173


>gi|330720188|gb|EGG98575.1| Ribosome recycling factor [gamma proteobacterium IMCC2047]
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 76/176 (43%), Positives = 111/176 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +  L      +RTGR   S+LD V V  YGS  PLNQVAN++V + R L+
Sbjct: 7   KDAEQRMEKALVALGAAFNRIRTGRAHASILDSVSVTYYGSETPLNQVANISVDDGRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K M+  VE+ I +SNLGLNP+  G ++RIP+P  TEE R  LVK A A AE++++
Sbjct: 67  ISPWEKPMIPEVEKAILKSNLGLNPVTTGDIIRIPMPALTEETRKDLVKQAKAEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           SVR++RRD    +K+ +K  + SED      ++IQKITD  I  I+  F  K+ ++
Sbjct: 127 SVRSVRRDANSDIKELQKEKEISEDEERKASDEIQKITDKYIAKIEEAFTAKEADL 182


>gi|223933844|ref|ZP_03625811.1| ribosome recycling factor [Streptococcus suis 89/1591]
 gi|223897495|gb|EEF63889.1| ribosome recycling factor [Streptococcus suis 89/1591]
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 114/175 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +DRM  +   L ++   +R GR + S+LD + VE YGS  PLNQ+A +TV E R+L+++ 
Sbjct: 10  QDRMNQSHQSLAREFSHIRAGRANASLLDRISVEYYGSPTPLNQLAGITVPEARVLLITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  +ER ++ S+LGL P  +G V+R+ +P  TEE R  L K      E SK+++R
Sbjct: 70  FDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKKVGENSKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD MD  KK+ K+ + +ED + +LE DIQK+TD  IK ID    +K+KE++ 
Sbjct: 130 NIRRDAMDEAKKAEKAKEITEDELKTLEKDIQKVTDDAIKTIDKMTADKEKELLE 184


>gi|294783615|ref|ZP_06748939.1| ribosome recycling factor [Fusobacterium sp. 1_1_41FAA]
 gi|294480493|gb|EFG28270.1| ribosome recycling factor [Fusobacterium sp. 1_1_41FAA]
          Length = 190

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 113/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+   ++R GR + +MLD VKVE YGS VPLNQV  V+  E R+L
Sbjct: 9   VKECEEKMLKTIEAVKERFTSIRAGRANVAMLDAVKVENYGSEVPLNQVGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  +E+ +  +NLG+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VIDPWDKTLIPKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKK--SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK    K    SED +   E  +Q +TD  IK ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEETHVQTLTDKYIKEIDELLAKKEKEI 187


>gi|298245133|ref|ZP_06968939.1| ribosome recycling factor [Ktedonobacter racemifer DSM 44963]
 gi|297552614|gb|EFH86479.1| ribosome recycling factor [Ktedonobacter racemifer DSM 44963]
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/173 (41%), Positives = 113/173 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   I  LK+D+ ++RTGR S S+LD + V+ YG+  P+NQVA +++ E R++V+  WD
Sbjct: 12  RMKRAIDALKQDLGSIRTGRASASLLDRITVDYYGAPTPVNQVATISIPEARLIVIQPWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K++ A +E+ I +S+LG+NP  +GQV+R+ +P   EERR  LVK  H   ++ K++VRN+
Sbjct: 72  KKISADIEKAIQKSDLGINPNNDGQVIRLNIPPMNEERRKDLVKSLHKKLDEHKVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD  D L++  K  + SED +      +QK+TD  I+ +D   + K+ EI+ 
Sbjct: 132 RRDVQDKLREREKKKEVSEDELKRSTEKLQKLTDRFIEEMDKVGKTKELEILE 184


>gi|167766543|ref|ZP_02438596.1| hypothetical protein CLOSS21_01049 [Clostridium sp. SS2/1]
 gi|317498945|ref|ZP_07957228.1| ribosome recycling factor [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711666|gb|EDS22245.1| hypothetical protein CLOSS21_01049 [Clostridium sp. SS2/1]
 gi|291558581|emb|CBL37381.1| ribosome recycling factor [butyrate-producing bacterium SSC/2]
 gi|316893778|gb|EFV15977.1| ribosome recycling factor [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 181

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +D+M  ++  +  D MT+R GR +P +LD VKV+ YG   P+ QV NV+V E R +
Sbjct: 2   LKQFEDKMQKSLDSMANDFMTIRAGRANPHVLDKVKVDYYGVATPVAQVGNVSVPEARTI 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+  ++  +E+ I  S++G+ P  +G+ +R+  P+ TEERR  L K      E++K
Sbjct: 62  MIQPWEPNLLKEIEKAILVSDIGITPTNDGKAIRLNFPDLTEERRKELAKDVKKRGEEAK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD  D +KK  K+G  ++D     E+ +QK+TD  IK ID   + K KEIM
Sbjct: 122 VAVRNIRRDANDFVKKQNKAGDLNDDQAKDEEDKVQKMTDKYIKQIDEAVDAKSKEIM 179


>gi|261379562|ref|ZP_05984135.1| ribosome recycling factor [Neisseria subflava NJ9703]
 gi|284798036|gb|EFC53383.1| ribosome recycling factor [Neisseria subflava NJ9703]
          Length = 185

 Score =  145 bits (367), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/172 (42%), Positives = 111/172 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  LK ++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + V  ++
Sbjct: 12  KMQRSLEVLKDNLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIGVKPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             M + VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV  + AE+ ++S+RN+
Sbjct: 72  SNMASKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRSEAEEGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 132 RRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLAAKEEDLM 183


>gi|19704944|ref|NP_602439.1| ribosome recycling factor (RRF) [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296329199|ref|ZP_06871700.1| ribosome recycling factor [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|22001936|sp|Q8R5Z9|RRF_FUSNN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|19712846|gb|AAL93738.1| Ribosome Recycling Factor (RRF) [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296153555|gb|EFG94372.1| ribosome recycling factor [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 190

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 114/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD +KVE YGS VPLNQ+  V+  E R+L
Sbjct: 9   VKECEEKMVKTIEAVKEKFTAIRAGRANVSMLDGIKVENYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ I  +N+G+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VIDPWDKTLISKIEKAILAANIGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKK--SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I++RNIR+D  +HLKK    K    SED +   E ++Q +TD  +K ID    +K+KEI
Sbjct: 129 IAIRNIRKDINNHLKKLEKDKENPISEDELKKEETNVQTLTDKYVKEIDDLLAKKEKEI 187


>gi|317121843|ref|YP_004101846.1| ribosome recycling factor [Thermaerobacter marianensis DSM 12885]
 gi|315591823|gb|ADU51119.1| ribosome recycling factor [Thermaerobacter marianensis DSM 12885]
          Length = 184

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 113/177 (63%), Gaps = 1/177 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++RM   +   ++++  +R GR +P++L+ ++V+ YG+  P++Q+A +T  EPRML
Sbjct: 6   LRQARERMEARVENFRRELAAVRAGRATPALLEKIRVDYYGTPTPIHQLATITAPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WDK ++  +E+ I +S+LG+NP  +GQV+RI +P  TEE R  LVK     AE+ +
Sbjct: 66  VVQPWDKSVMGEIEKAIAKSDLGVNPSSDGQVIRIVLPPLTEETRNELVKRVRKMAEEER 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VRN+RR   D LK+    G  SED +   +  +Q++TD TI  ID     K+KEI
Sbjct: 126 VAVRNVRRQANDDLKELEDQG-FSEDEIRRAQEKVQELTDRTIARIDELLAAKEKEI 181


>gi|326791507|ref|YP_004309328.1| ribosome recycling factor [Clostridium lentocellum DSM 5427]
 gi|326542271|gb|ADZ84130.1| ribosome recycling factor [Clostridium lentocellum DSM 5427]
          Length = 184

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 114/179 (63%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L   +++M  ++     ++ T+R GR +P +LD + V+ YG   P+ QV N+TV E R+
Sbjct: 4   ELNKCQEKMNKSLGAFADELATIRAGRANPHVLDRLTVDYYGVATPVQQVGNITVPEARV 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L +  W+  ++ ++E+ I+ES+LG+NP  +G+V+R+  PE TEERR  L K      E S
Sbjct: 64  LQIQPWEGTLLKAIEKAINESDLGINPTNDGKVIRLVFPELTEERRKDLTKDIKKKGENS 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KI++RNIRRD ++  KK  K+ + ++D V   E ++QK+TD  +  ID+  ++K KEI+
Sbjct: 124 KIAIRNIRRDALETFKKMEKANEMTKDEVEVAEKEVQKLTDKFVGEIDALVDKKSKEIL 182


>gi|50365372|ref|YP_053797.1| ribosome recycling factor [Mesoplasma florum L1]
 gi|60390251|sp|Q6F0R0|RRF_MESFL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|50363928|gb|AAT75913.1| ribosome recycling factor [Mesoplasma florum L1]
          Length = 181

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 112/174 (64%), Gaps = 3/174 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M DT+   ++ + T+RTGR S +MLD V V  YG+  P+NQ A ++  EP++LV+  WD
Sbjct: 11  QMEDTVVAWQEHIKTIRTGRASATMLDKVMVNYYGTPTPVNQTAQISTPEPQLLVIKPWD 70

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  V   I++S+L LNP+ + +V+RI +P  TEE R  LVK  +   E  K+ +RNI
Sbjct: 71  KTLIQEVVAAINKSDLNLNPVSDAEVVRINIPALTEEIRKDLVKKMNKELENFKVRIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD +D  KK +     SED+V  +E DIQK+TDS+IK +D   + K+KE+M  
Sbjct: 131 RRDSIDTAKKDK---SISEDVVKGIETDIQKLTDSSIKQLDEISKVKEKELMAI 181


>gi|88802057|ref|ZP_01117585.1| ribosome releasing factor [Polaribacter irgensii 23-P]
 gi|88782715|gb|EAR13892.1| ribosome releasing factor [Polaribacter irgensii 23-P]
          Length = 184

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 110/174 (63%), Gaps = 4/174 (2%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ MGD I+ L+K++  +R G+ +P+ML  V V+ YGS  PL+QVANV   +PR + +  
Sbjct: 13  KEAMGDAIAHLEKELRAIRAGKATPAMLANVMVDYYGSQTPLSQVANVNTPDPRTIAIQP 72

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K M+  +E+ I  +NLG NP+  G ++ I VP  TEERR+ L K A A AE +K+ +R
Sbjct: 73  WEKSMLQPIEKAIMAANLGFNPMNNGDIIMINVPPLTEERRIGLAKQAKAEAEHAKVGIR 132

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R+D  + +KK+      S+D+    E DIQ +TDS +K I+     K++EIM
Sbjct: 133 NARKDANNDIKKT----DISDDLKKDSELDIQNLTDSFVKVIEEKLAVKEREIM 182


>gi|315127161|ref|YP_004069164.1| ribosome releasing factor [Pseudoalteromonas sp. SM9913]
 gi|315015675|gb|ADT69013.1| ribosome releasing factor [Pseudoalteromonas sp. SM9913]
          Length = 173

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 105/173 (60%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +++ L   +  +RTGR  P++LD + V  YG+  PLNQVANVT+ + R L + V+DK
Sbjct: 1   MQKSVAALGSQLSKIRTGRAHPAILDGIMVSYYGAPTPLNQVANVTIEDSRTLAIGVFDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+K+     E  ++++RNIR
Sbjct: 61  SLAQAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKIVRGEVEGGRVAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD    +K   K    SED     E+ IQKITD  IK +D+    K+ E+M  
Sbjct: 121 RDANGDIKNLLKDKDISEDEARQAEDAIQKITDKFIKEMDTQLTAKEAELMEI 173


>gi|190360296|sp|Q21HH5|RRF_SACD2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 185

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 109/176 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM   I  L      +RTGR  PS+LD V V  YGS  PL+QVANVTVL+ R L +S 
Sbjct: 10  EERMSRAIEALGTHFNKIRTGRAHPSILDGVMVSYYGSATPLSQVANVTVLDARTLSISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K +V  +E+ I +S+LGLNP+  G ++R+P+P  TEE R   +K A A AE +++S+R
Sbjct: 70  WEKNIVPEIEKAIMKSDLGLNPVTTGDLIRVPMPMLTEETRKGYIKRARAEAESARVSIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRD +  +K   K  + SED      ++IQ+IT+  +  +D     K+K++M  
Sbjct: 130 NVRRDALAEVKALVKDKEISEDDERRAADEIQQITNKYVAEVDKALSAKEKDLMEI 185


>gi|32400999|gb|AAP80705.1| ribosome recycling factor [Griffithsia japonica]
          Length = 230

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 113/172 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  TI  +K    ++RTGR SPS+LD ++V  YG+  PLN +A V+V     LVV  +D
Sbjct: 57  RMQKTIDSVKSAFNSVRTGRASPSLLDRIQVNYYGADTPLNSLATVSVSGTSTLVVEPYD 116

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  ++ +ER + ES++GL P  +G  +R+ +P+ T+ERR  LVK   + AE  ++++RNI
Sbjct: 117 KSCISDIERSLMESDIGLTPNSDGSTIRLSIPQLTKERRSQLVKQVKSMAEDGRVAIRNI 176

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +D +KK  K  +  +D   +L++ +QK+TD  +K I+S +++K+++IM
Sbjct: 177 RRDAVDSIKKLEKKSELGKDESKTLQDRVQKLTDKYVKTIESVYKQKEEDIM 228


>gi|289522434|ref|ZP_06439288.1| ribosome recycling factor [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504270|gb|EFD25434.1| ribosome recycling factor [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 188

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 115/167 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+++++ M   +   K +M  +R GR  P++++ +KV+ YG+  P+ Q+  +++ EPR +
Sbjct: 9   LKDMRESMKKAVEHFKAEMTGIRAGRAHPALVENIKVDYYGAQTPIKQMGTISIPEPRQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S+WDK  + +VE+ I  S LG+ P V+G+ +RI +PE T+ERR+ L ++   YAE+++
Sbjct: 69  LISLWDKTAIKAVEKAIQASQLGVMPQVDGENIRITLPELTKERRVELSRLVKKYAEEAR 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           +++RNIRRD +D LKK  K  + SED +  L+++IQ+IT+  I+ ++
Sbjct: 129 VAIRNIRRDVLDELKKQEKDSEISEDELRRLQDEIQEITNEYIEMVN 175


>gi|90022239|ref|YP_528066.1| ribosome recycling factor [Saccharophagus degradans 2-40]
 gi|89951839|gb|ABD81854.1| ribosome recycling factor [Saccharophagus degradans 2-40]
          Length = 187

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 109/176 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM   I  L      +RTGR  PS+LD V V  YGS  PL+QVANVTVL+ R L +S 
Sbjct: 12  EERMSRAIEALGTHFNKIRTGRAHPSILDGVMVSYYGSATPLSQVANVTVLDARTLSISP 71

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K +V  +E+ I +S+LGLNP+  G ++R+P+P  TEE R   +K A A AE +++S+R
Sbjct: 72  WEKNIVPEIEKAIMKSDLGLNPVTTGDLIRVPMPMLTEETRKGYIKRARAEAESARVSIR 131

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRD +  +K   K  + SED      ++IQ+IT+  +  +D     K+K++M  
Sbjct: 132 NVRRDALAEVKALVKDKEISEDDERRAADEIQQITNKYVAEVDKALSAKEKDLMEI 187


>gi|331698487|ref|YP_004334726.1| ribosome-recycling factor [Pseudonocardia dioxanivorans CB1190]
 gi|326953176|gb|AEA26873.1| Ribosome-recycling factor [Pseudonocardia dioxanivorans CB1190]
          Length = 185

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  K D+ ++RTGR +PSM   + V+ YG+  PLNQ+A+V+V E RM 
Sbjct: 6   LFDAEEKMEKAVSVAKDDLASVRTGRATPSMFSRIMVDYYGAMTPLNQLASVSVPEARMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +D   + ++E+ I  S+LG+NP  +GQ++R+ +P+ +EERR  +VKVA    E ++
Sbjct: 66  VVKPYDASQIGALEKAIRNSDLGVNPTNDGQIIRVVIPQLSEERRKEMVKVARGKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++R++RR  M+ L +  K G+A ED V   E ++Q  TD  +  +D   + K+ E++ 
Sbjct: 126 VTIRSLRRKAMEELHRIVKEGEAGEDEVGRAEKELQGTTDKYVHQVDELVKHKEAELLE 184


>gi|238751448|ref|ZP_04612940.1| Ribosome-recycling factor [Yersinia rohdei ATCC 43380]
 gi|238710315|gb|EEQ02541.1| Ribosome-recycling factor [Yersinia rohdei ATCC 43380]
          Length = 185

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/159 (47%), Positives = 108/159 (67%)

Query: 28  LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L ++V+D+ + A+VE+ I  S+
Sbjct: 27  IRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFDRSLSAAVEKAIMTSD 86

Query: 88  LGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSG 147
           LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++SVRN+RRD  + LK   K  
Sbjct: 87  LGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSVRNVRRDANEKLKALLKDK 146

Query: 148 KASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + SED     ++DIQK+TD  IK +D+    K+ E+M F
Sbjct: 147 EISEDEDRRSQDDIQKLTDIFIKKVDAALAAKEAELMDF 185


>gi|254480101|ref|ZP_05093349.1| ribosome recycling factor [marine gamma proteobacterium HTCC2148]
 gi|214039663|gb|EEB80322.1| ribosome recycling factor [marine gamma proteobacterium HTCC2148]
          Length = 185

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 108/175 (61%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  ++  L  +   +RTGR  PS+LD ++VE YG+  PLNQ+ANV V + R L ++ W
Sbjct: 11  ERMSKSLDALSHNFNKIRTGRAHPSLLDGLRVEYYGAETPLNQMANVNVEDARTLSLTAW 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK M+ ++E+ I +S+LGLNP   G+V+RIP+P  TEE R   ++ A   AE +++SVRN
Sbjct: 71  DKTMIPAIEKAIMKSDLGLNPATAGEVIRIPMPMLTEETRKGYIRQARHEAESARVSVRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            RRD    LK+  K  + SED      + IQK+TDS I  ++     K+ ++M  
Sbjct: 131 ARRDANAMLKELEKDKEISEDDERRGHDGIQKVTDSYIAQVEKMLAAKEADLMEI 185


>gi|45644743|gb|AAS73131.1| predicted ribosome recycling factor [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 184

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+++ ++M  +++ LK     +RTGR +P++LD + V+ YG+  P+NQ +N++V E R L
Sbjct: 5   LKDLTEKMEKSVTALKNAFNKIRTGRANPAILDDINVDYYGNPTPINQTSNISVEEGRSL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S WDK ++  +E+ I  S+LGLNP   G ++R+ +P  TEE R   +K A A AE S+
Sbjct: 65  VISPWDKNLIPEIEKAILSSDLGLNPSTSGDLIRVTMPALTEETRQDYIKQARAEAENSR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RNIRRD  +  K  ++S + SED +  +E+ IQK TD  I  +DS  + K+ +++  
Sbjct: 125 ISIRNIRRDANNSAKDMQQSSEISEDDLRRIEDLIQKETDKFISIVDSDLKNKESDLLEI 184


>gi|332967732|gb|EGK06839.1| ribosome recycling factor [Kingella kingae ATCC 23330]
          Length = 185

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 111/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M  ++  L  ++  +RTGR    +LD V VE +GS VP++QVANVT+L+ R + V  
Sbjct: 10  ENKMQRSLEVLGDNLSKVRTGRAHTGLLDQVSVEYWGSEVPISQVANVTLLDARTIGVKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++  M + +E+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE  ++S+R
Sbjct: 70  FESNMASKIEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEDGRVSIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N+RRD  DH+KK  K  + SED     E  +QK+TD  I ++D     K++++M
Sbjct: 130 NVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIADVDKMLAAKEEDLM 183


>gi|291614111|ref|YP_003524268.1| ribosome recycling factor [Sideroxydans lithotrophicus ES-1]
 gi|291584223|gb|ADE11881.1| ribosome recycling factor [Sideroxydans lithotrophicus ES-1]
          Length = 185

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 110/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++ +M  ++  LK D+  +RTGR    +LD V V+ YGS   +NQVAN+T+ + R + 
Sbjct: 7   KNVEQKMAKSLEALKTDLGKIRTGRAHTGLLDHVMVDYYGSPTAVNQVANITLTDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K MV  +E+ I +S+LGLNP   G ++R+P+P  TEERR  L+KV  +  E +K+
Sbjct: 67  VQPYEKNMVGPIEKAIRDSDLGLNPATNGDLIRVPMPMLTEERRRDLIKVVKSEGEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD  + LKK  K     ED     + D+QK+TD  +  ID   + K+ ++M
Sbjct: 127 AVRNIRRDANEQLKKLLKDKAVGEDEERRAQEDVQKLTDRFVAEIDKALQAKETDLM 183


>gi|160934097|ref|ZP_02081484.1| hypothetical protein CLOLEP_02960 [Clostridium leptum DSM 753]
 gi|156866770|gb|EDO60142.1| hypothetical protein CLOLEP_02960 [Clostridium leptum DSM 753]
          Length = 184

 Score =  145 bits (366), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 117/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M QV   +N   +M  TI+ L  +   +R GR +P++LD + V+ YGS   +NQ+A ++V
Sbjct: 1   MKQV--FENADKKMNKTINALTSEFAGIRAGRANPAVLDKIMVDYYGSPTAINQLAAISV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R L +S WD+ +V +VE+ I  S+LG+NP  +G+V+R+  P  TE+RR  +VK    
Sbjct: 59  TEARTLTISPWDQSVVHAVEKAIQSSDLGINPQTDGKVIRLIFPPLTEDRRRDIVKDIKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++K+++R+IRRD MD LK  +K+G+ +ED +   E  +Q  TD  IK I+S  + K+
Sbjct: 119 MEEEAKVAIRSIRRDSMDKLKALKKNGEITEDDLKDAEKKMQNQTDKFIKEIESISQVKE 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEI 184


>gi|300870157|ref|YP_003785028.1| Ribosome recycling factor [Brachyspira pilosicoli 95/1000]
 gi|300687856|gb|ADK30527.1| Ribosome recycling factor [Brachyspira pilosicoli 95/1000]
          Length = 182

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 112/176 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ KDRM   I+ L+ D+  +RTGR + S+LD VKVEAYGS +PL QV NV+  + + ++
Sbjct: 4   ESYKDRMEKAINSLQNDLKGIRTGRANASILDGVKVEAYGSSMPLKQVGNVSTPDAKTIM 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK +V  +E+ I +++LG NP  +G  +RI VPE T+ERR  L K      E++KI
Sbjct: 64  IQPFDKALVGDIEKAILKADLGFNPFNDGGNIRIMVPELTKERREELKKGVRHRGEEAKI 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++RNIRRD  D +KK  K    +ED   +LE  IQ  TDS IK +D     K+KE+
Sbjct: 124 AIRNIRRDENDIIKKDLKDKTITEDESKNLEKKIQNDTDSYIKKVDELITSKEKEL 179


>gi|325207224|gb|ADZ02676.1| ribosome recycling factor [Neisseria meningitidis NZ-05/33]
          Length = 185

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 114/182 (62%), Gaps = 1/182 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+  
Sbjct: 4   DIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDAC 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLM 183

Query: 185 HF 186
             
Sbjct: 184 AI 185


>gi|148653598|ref|YP_001280691.1| ribosome recycling factor [Psychrobacter sp. PRwf-1]
 gi|172048549|sp|A5WGF0|RRF_PSYWF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|148572682|gb|ABQ94741.1| ribosome recycling factor [Psychrobacter sp. PRwf-1]
          Length = 184

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 1/175 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +DRM  T+  L+     +RTGR  P ML  V V  YG+  PLNQVA+V V + R L+V  
Sbjct: 10  EDRMKKTLEVLENAFSKVRTGRAHPGMLSGVMVSYYGADTPLNQVASVNVEDSRTLLVQP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +++ MV +V++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE S++S+R
Sbjct: 70  FERSMVQAVDKAIREADLGLNPMT-ADVIRVPMPALTEETRRDMQKLARGEAENSRVSIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+RRD ++ +K+  K  + SED      +DIQKITD  I +IDS  E K+KE+M 
Sbjct: 129 NVRRDMLNDIKELAKEKEISEDDERRASDDIQKITDKYIASIDSKLEAKEKELME 183


>gi|312879901|ref|ZP_07739701.1| ribosome recycling factor [Aminomonas paucivorans DSM 12260]
 gi|310783192|gb|EFQ23590.1| ribosome recycling factor [Aminomonas paucivorans DSM 12260]
          Length = 185

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 120/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++++K R   +I  LK  +  +RTGR  P++++ +KV+ +G+  PL Q+A V + E R +
Sbjct: 6   IKDMKHRTEKSIEHLKTTLQGIRTGRAHPALVEEIKVDYFGTLTPLKQMAMVNIPESRQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK  + ++E+ I  S+LG+NP ++G+ +R+ +PE T ERR+ L K+ + Y+E++K
Sbjct: 66  VIAPWDKTALKAIEKAIQASSLGVNPRIDGESIRLTLPELTRERRVELSKLVNKYSEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRR+ ++ LKK  K G  SED +  L+ ++Q+ TD   + ++    EK KEI++
Sbjct: 126 VAIRNIRREVLEALKKMEKDGTISEDELKKLQKEVQEHTDEATRKVEQATAEKDKEILN 184


>gi|332994201|gb|AEF04256.1| ribosome recycling factor [Alteromonas sp. SN2]
          Length = 185

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 110/177 (62%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + ++RM  +IS LK     +RTGR  PS+LD + V  YG+  PL QVANV   + R L +
Sbjct: 8   DAQERMDKSISALKGQFSKIRTGRAHPSLLDGIMVPYYGTDTPLKQVANVIAEDSRTLAL 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +V+DK  + +VE+ I +++LGLNP+  G  +RIP+P  TEERR  L++V    AE  ++S
Sbjct: 68  TVFDKSAIQAVEKAIMQADLGLNPMSAGGSIRIPLPPLTEERRKDLIRVVRNEAENGRVS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD    +K+  K  + SED   + E +IQ +T+  IK +D     K+KE+M 
Sbjct: 128 IRNIRRDANSDVKELLKEKEISEDESRAAEENIQSLTNDFIKKVDGMLAVKEKELME 184


>gi|227549021|ref|ZP_03979070.1| ribosome recycling factor [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078875|gb|EEI16838.1| ribosome recycling factor [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 185

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 113/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRM   +   +++++++RTGR +P+M + V  + YG+  P+NQ+A V+V EPRML
Sbjct: 6   LLDSEDRMSKAVEHTREELVSIRTGRANPAMFNGVVADFYGAPTPINQMATVSVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +  +   I  S+LG+NP  +GQV+R+ VP+ TEERR  LVK A    E+ K
Sbjct: 66  LIKPFDMSTLNEILNAIRNSDLGVNPTDDGQVIRVTVPQLTEERRRELVKQAKQKGEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RR GM+ LKK +K G A ED V + E  + K T   +  +D    +K+ E++ 
Sbjct: 126 VAIRNVRRQGMEALKKIQKDGDAGEDEVKTAEQALDKTTARYVAQVDEIVSKKEAELLE 184


>gi|86606512|ref|YP_475275.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
 gi|86555054|gb|ABD00012.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
          Length = 182

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 114/182 (62%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++L  I++ M   +   ++   T+RTGR + S+LD V+VE YG   PL  +A++T  +  
Sbjct: 1   MELAEIEELMSKAVQATQRSFNTVRTGRANASLLDRVQVEYYGVPTPLKALASITTPDAS 60

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L++  +D   +A++ER I  S+LGL P  +G+V+R+ +P  TEERR  L K     AE+
Sbjct: 61  TLLIQPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLNIPPLTEERRKELSKQVAKLAEE 120

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RNIRRD +D ++K  K+G+ SED   SL+ +IQK+TD  IK ID    EK+KE+ 
Sbjct: 121 GRVSIRNIRRDAIDSVRKREKNGEISEDESKSLQEEIQKLTDRYIKKIDDLLAEKEKELT 180

Query: 185 HF 186
             
Sbjct: 181 TL 182


>gi|153207713|ref|ZP_01946360.1| ribosome recycling factor [Coxiella burnetii 'MSU Goat Q177']
 gi|154705951|ref|YP_001424018.1| ribosome recycling factor [Coxiella burnetii Dugway 5J108-111]
 gi|165919005|ref|ZP_02219091.1| ribosome recycling factor [Coxiella burnetii RSA 334]
 gi|212212246|ref|YP_002303182.1| ribosome recycling factor [Coxiella burnetii CbuG_Q212]
 gi|212218981|ref|YP_002305768.1| ribosome recycling factor [Coxiella burnetii CbuK_Q154]
 gi|189044052|sp|A9KBR6|RRF_COXBN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749925|sp|B6J8M4|RRF_COXB1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749926|sp|B6IZA9|RRF_COXB2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120576409|gb|EAX33033.1| ribosome recycling factor [Coxiella burnetii 'MSU Goat Q177']
 gi|154355237|gb|ABS76699.1| ribosome recycling factor [Coxiella burnetii Dugway 5J108-111]
 gi|165917330|gb|EDR35934.1| ribosome recycling factor [Coxiella burnetii RSA 334]
 gi|212010656|gb|ACJ18037.1| ribosome Recycling Factor (RRF) [Coxiella burnetii CbuG_Q212]
 gi|212013243|gb|ACJ20623.1| ribosome recycling factor [Coxiella burnetii CbuK_Q154]
          Length = 185

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 110/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM  ++  LK ++  LRTGR  PS+L+ +KV+ Y    PL+QVA++ +  PR L ++ 
Sbjct: 10  KSRMEKSLGSLKTELAKLRTGRAHPSLLEHIKVDYYNVETPLSQVASIAIENPRTLSITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K MV  +E+ I +++LGLNP   G V+R+P+P  TEERR  L +V    AE +++++R
Sbjct: 70  WEKNMVGPIEKAIQKADLGLNPATVGMVIRVPLPPLTEERRKELARVVREEAEHARVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRR+  + LK+  K  + SED     +  IQK+TD+ I  +D    +K+ ++M
Sbjct: 130 NIRREANNDLKELMKEKEISEDEERRAQTAIQKLTDAQIAEVDKMASQKEADLM 183


>gi|54026099|ref|YP_120341.1| ribosome recycling factor [Nocardia farcinica IFM 10152]
 gi|60390236|sp|Q5YS64|RRF_NOCFA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|54017607|dbj|BAD58977.1| putative ribosome recycling factor [Nocardia farcinica IFM 10152]
          Length = 185

 Score =  145 bits (365), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 110/179 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  K D+ T+RTGR +P M   V V+ YGS  P+ Q++++TV EPRM+
Sbjct: 6   LFDAEEKMEKAVSVAKDDLGTIRTGRANPGMFARVVVDYYGSPTPVTQMSSITVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP   G +LRI +P+ TEERR  LVK A    E +K
Sbjct: 66  VIKPYEAGQLGAIETAIRNSDLGVNPTNNGDILRITIPQLTEERRRELVKQAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RR  MD L + +K G+A ED V   E ++ K T   +  ID   + K+ E++ 
Sbjct: 126 VAIRNVRRKAMDELARIQKDGEAGEDEVGRAEKELDKTTAKYVSQIDELVKHKEAELLE 184


>gi|237741356|ref|ZP_04571837.1| ribosome Recycling Factor [Fusobacterium sp. 4_1_13]
 gi|229430888|gb|EEO41100.1| ribosome Recycling Factor [Fusobacterium sp. 4_1_13]
          Length = 190

 Score =  145 bits (365), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 113/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD +KVE YGS VPLNQ+  V+  E R+L
Sbjct: 9   VKECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGIKVENYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ +  +NLG+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VIDPWDKSLISKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKK--SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK    K    SED +   E  +Q +TD  +K ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEETRVQTLTDKYVKEIDDLLAKKEKEI 187


>gi|262202045|ref|YP_003273253.1| ribosome recycling factor [Gordonia bronchialis DSM 43247]
 gi|262085392|gb|ACY21360.1| ribosome recycling factor [Gordonia bronchialis DSM 43247]
          Length = 185

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 112/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  K DM ++RTGR +P+M + V +E YG+  P+ QVA++   EPR++
Sbjct: 6   LFDAEEKMEKAVSVAKDDMGSIRTGRANPAMFNKVVIEYYGAMTPVTQVASINTPEPRLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   +  +E  I  S+LG+NP  +G V+R+ VP+ TEERR  LVK A    E +K
Sbjct: 66  VIKPYEASTLRDIETAIRNSDLGVNPTNDGNVIRVAVPQLTEERRRDLVKQAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RNIRR  +D LK+ +K G+A ED V   E ++ K T   ++ +D   + K+ E++ 
Sbjct: 126 VSIRNIRRKAVDELKRIQKDGEAGEDEVTRAEKELDKTTAGYVQQVDELVKHKENELLE 184


>gi|298370305|ref|ZP_06981621.1| ribosome recycling factor [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281765|gb|EFI23254.1| ribosome recycling factor [Neisseria sp. oral taxon 014 str. F0314]
          Length = 185

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVAN+T+++ R
Sbjct: 4   DIQKTAEGKMQRSLEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANITLVDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFESNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRNEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEVSEDEARRGEEAVQKLTDKYISEADKILAAKEEDLM 183


>gi|261856047|ref|YP_003263330.1| ribosome recycling factor [Halothiobacillus neapolitanus c2]
 gi|261836516|gb|ACX96283.1| ribosome recycling factor [Halothiobacillus neapolitanus c2]
          Length = 185

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 78/174 (44%), Positives = 107/174 (61%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  +I  LK ++  +RTGR   S+LD V V+ YGS VPL+QVA ++  + R L V+ W+
Sbjct: 12  RMHKSIDALKVELSKIRTGRAHVSILDHVSVDYYGSMVPLSQVAKLSAEDSRTLSVTPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           KEMV  +E+ I  S+LGLNP   G V+R+P+P  TEERR  L KV     E +K++VRNI
Sbjct: 72  KEMVGKIEKAIMTSDLGLNPSTSGLVIRVPMPALTEERRKELGKVVRTEGENAKVAVRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  + LK   K    SED     ++ IQK+TD  +  ID    EK+KE++  
Sbjct: 132 RRDANNDLKNMLKDKDISEDDERRGQDLIQKLTDQCVTEIDKLVAEKEKELLEV 185


>gi|269118716|ref|YP_003306893.1| ribosome recycling factor [Sebaldella termitidis ATCC 33386]
 gi|268612594|gb|ACZ06962.1| ribosome recycling factor [Sebaldella termitidis ATCC 33386]
          Length = 185

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 115/177 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +M   +   K    ++R GR + SMLD + V+AYG+  PL+Q+  ++  E R+L
Sbjct: 6   LKETETKMEKAVESTKDKFASIRAGRANVSMLDGITVDAYGAPSPLSQIGTLSAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK ++ ++E+ I ++NLGLNP  +G+++R+ VPE TEERR   VK+    AE+ K
Sbjct: 66  TIDPWDKSLIPAIEKAIQQANLGLNPSNDGRIIRLSVPELTEERRKEYVKMVRKEAEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIR+D  + L+KS K  + +ED + S E+ +QK+TD   K +D   ++K+KE+
Sbjct: 126 VAIRNIRKDVNNKLRKSEKDSEITEDDLKSGEDSVQKLTDKFTKLVDEALDKKEKEL 182


>gi|92112699|ref|YP_572627.1| ribosome recycling factor [Chromohalobacter salexigens DSM 3043]
 gi|122420714|sp|Q1R030|RRF_CHRSD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91795789|gb|ABE57928.1| ribosome recycling factor [Chromohalobacter salexigens DSM 3043]
          Length = 185

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 104/173 (60%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  L  +   +RTGR  PS+LD V VE YGS +PLNQVA+V V + R L V  W+
Sbjct: 12  RMKKSVEALNANFHKIRTGRAHPSLLDAVTVEYYGSEMPLNQVASVNVEDARTLAVVPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K MV  VE+ I  S+LGLNP   G V+R+P+P  TEE R   +K A   AE ++++VRN+
Sbjct: 72  KSMVPKVEKAIMTSDLGLNPAAAGNVIRVPLPPLTEETRRNYIKQARGEAENARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD    LK   K  + +ED      ++IQK+TD  +  ID   E K+ +++ 
Sbjct: 132 RRDANGDLKSLLKEKEITEDEERHAIDEIQKLTDKYVTEIDKLLETKEHDLLQ 184


>gi|325143201|gb|EGC65541.1| ribosome recycling factor [Neisseria meningitidis 961-5945]
          Length = 185

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 114/182 (62%), Gaps = 1/182 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS V ++QVANVT+L+ R
Sbjct: 4   DIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVSVSQVANVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLM 183

Query: 185 HF 186
             
Sbjct: 184 AI 185


>gi|257126427|ref|YP_003164541.1| ribosome recycling factor [Leptotrichia buccalis C-1013-b]
 gi|257050366|gb|ACV39550.1| ribosome recycling factor [Leptotrichia buccalis C-1013-b]
          Length = 185

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+ ++++M  ++   K     +R GR S SMLD V VEAYGS  PLNQV  V+  E R+L
Sbjct: 6   LKEVEEKMQKSVENTKTKFSHVRAGRASVSMLDGVTVEAYGSPTPLNQVGTVSAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++ ++E+ I ++NLG NP  +G+++R+ VPE TE+RR   VK+    AE+ K
Sbjct: 66  VIDPWDKSLIPAIEKTILQANLGFNPSNDGKIIRLVVPELTEDRRKEYVKMVKKEAEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+R++  + L+K  K+ + +ED + S E  +QK TD  I  +D    +K+KE++
Sbjct: 126 VAIRNVRKEVNNKLRKLEKNSEITEDELKSSEEKVQKSTDKFIAQVDEALNKKEKELL 183


>gi|226356272|ref|YP_002786012.1| ribosome recycling factor [Deinococcus deserti VCD115]
 gi|259494537|sp|C1CVP1|RRF_DEIDV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226318262|gb|ACO46258.1| putative Ribosome recycling factor (Ribosome-releasing factor)
           (RRF) [Deinococcus deserti VCD115]
          Length = 183

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/176 (42%), Positives = 115/176 (65%), Gaps = 3/176 (1%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + ++RMG  I  L+ ++  LRTGR +P +L  V V+ YGS +P++QVA++T  + R LV+
Sbjct: 10  DARERMGKAIEALESNLSVLRTGRANPGILKKVIVDYYGSTMPIDQVASITTPDARTLVI 69

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + WD+  +  +E+ I +S+LGLNP  +G  + I +P  TEERR  LVK A  YAE ++I+
Sbjct: 70  TPWDRGALGPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKNYAEDARIA 129

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VRNIR+  +D +KK    G   +D +   E ++QKITD  I  +DS F +K++EI+
Sbjct: 130 VRNIRKHALDEVKKVEGVG---DDEIKRGEAEVQKITDEFIARVDSTFHKKEQEIL 182


>gi|116749216|ref|YP_845903.1| ribosome recycling factor [Syntrophobacter fumaroxidans MPOB]
 gi|166231522|sp|A0LJ66|RRF_SYNFM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116698280|gb|ABK17468.1| ribosome recycling factor [Syntrophobacter fumaroxidans MPOB]
          Length = 185

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
             + +DRM   +  L+ D   LRTGR S S++D ++ E YG+   LNQ+A +T+ EPR +
Sbjct: 6   FADARDRMSKALDNLETDYKRLRTGRASVSLVDGIRAEYYGTPTALNQLATITIPEPRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD  ++  +E+ I +S LGL P+ +G+V+RI +P  T +RR  LVKV    +E+SK
Sbjct: 66  MIQPWDTSVIGEIEKSILKSELGLTPMSDGKVIRINIPVLTADRRRELVKVVKKMSEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + +K  +K  + SED     + + Q+ITD  IK ID  +  K+KEI+  
Sbjct: 126 VAVRNIRRDVNEMIKDLKKEKEISEDEQFKAQEETQRITDDFIKKIDVVYSAKEKEILEI 185


>gi|227872428|ref|ZP_03990772.1| ribosome recycling factor [Oribacterium sinus F0268]
 gi|227841725|gb|EEJ52011.1| ribosome recycling factor [Oribacterium sinus F0268]
          Length = 184

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 109/173 (63%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  T   L  ++ T+R GR +P +LD + V+ YG+  P+ QV NV+V E R+L +  W
Sbjct: 10  EKMHKTHDNLMSELGTIRAGRANPHVLDRIMVDYYGTPTPIQQVGNVSVPEARILQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I+ S LG+NP  +GQV+R+  PE TEERR  L K      E +KI++RN
Sbjct: 70  DKSVMKEIEKAINMSELGINPTNDGQVIRLVFPELTEERRKELTKDVKKKGEAAKIAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRD MD  KK  K+ + +ED ++    DIQ++TD  I+ ID   E K KE+M
Sbjct: 130 IRRDAMDLAKKLEKNAEITEDDLSRQTKDIQELTDHMIEKIDKSVEAKNKELM 182


>gi|152991582|ref|YP_001357304.1| ribosome recycling factor [Nitratiruptor sp. SB155-2]
 gi|166230808|sp|A6Q638|RRF_NITSB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151423443|dbj|BAF70947.1| ribosome recycling factor Frr [Nitratiruptor sp. SB155-2]
          Length = 186

 Score =  144 bits (363), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 111/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +D M  ++  LKKD  TLRTGRV+ ++++ +KV+ YG+  PLNQ A+V   +   +V+S 
Sbjct: 11  RDHMQKSLDVLKKDFNTLRTGRVTTAVVENIKVDYYGAPTPLNQAASVVAADATTIVISP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK ++  +ER I E+N+G+NP  +G  +++  P  T E+R A  K A  + EK+KI++R
Sbjct: 71  WDKSLLGEIERAIQEANIGVNPNNDGDQIKLFFPPMTVEQREAEAKKAKQFGEKAKIAIR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N+RRD  D +KK  K    +ED       ++QKITD  IK +D   ++K++EIM
Sbjct: 131 NVRRDANDKIKKLFKDKAITEDEEKRGLEEVQKITDEFIKKVDDLVKQKEQEIM 184


>gi|82701793|ref|YP_411359.1| ribosome recycling factor [Nitrosospira multiformis ATCC 25196]
 gi|123544950|sp|Q2YBA4|RRF_NITMU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|82409858|gb|ABB73967.1| ribosome recycling factor [Nitrosospira multiformis ATCC 25196]
          Length = 185

 Score =  144 bits (363), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 109/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  LK D+  +RTGR    +LD V V+ YG+   +NQVAN+++ + R + V+ W+
Sbjct: 12  KMQKSLEALKLDLGKIRTGRAHTGLLDHVTVDYYGNPTAINQVANISLADARTITVAPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+M+ ++E+ I  S+LGLNP   G+++R+P+P  TEERR  L KV     E +++++RNI
Sbjct: 72  KKMLGAIEKAIRNSDLGLNPTTVGELIRVPMPPLTEERRRDLTKVVKHEGEAARVAMRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD   HLK   K  K +ED     + DIQK+TD  I +ID   + K+ E+M
Sbjct: 132 RRDANAHLKDLLKEKKIAEDEERKGQEDIQKLTDRYIADIDKLLQAKEAELM 183


>gi|238784883|ref|ZP_04628883.1| Ribosome-recycling factor [Yersinia bercovieri ATCC 43970]
 gi|238796611|ref|ZP_04640118.1| Ribosome-recycling factor [Yersinia mollaretii ATCC 43969]
 gi|238714200|gb|EEQ06212.1| Ribosome-recycling factor [Yersinia bercovieri ATCC 43970]
 gi|238719589|gb|EEQ11398.1| Ribosome-recycling factor [Yersinia mollaretii ATCC 43969]
          Length = 185

 Score =  144 bits (363), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 114/174 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L ++V+D
Sbjct: 12  RMEKCLEAFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLALTVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++S+RN+
Sbjct: 72  RSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRVSIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  + +K   K  + SED     ++++QK+TD+ IK +D+    K+ E+M F
Sbjct: 132 RRDANEKVKALLKDKEISEDEDRRSQDEVQKLTDAFIKKVDAALAAKEAELMDF 185


>gi|291459117|ref|ZP_06598507.1| ribosome recycling factor [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418371|gb|EFE92090.1| ribosome recycling factor [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 184

 Score =  144 bits (363), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 107/173 (61%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  T   L  ++ T+R GR +P +LD + V+ YG+  PL QV N++V E RML +  W
Sbjct: 10  EKMHKTHDNLMSELATIRAGRANPHVLDRITVDYYGTQTPLQQVGNISVPEARMLQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK M+  +E+ I+ S+LG+NP  +G  +R+  PE TEERR  L K      E +K+++RN
Sbjct: 70  DKGMLKEIEKAINLSDLGINPTNDGNTIRLVFPELTEERRRELTKEVKKKGEAAKVAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRD M+  KK  K+ + +ED ++    DIQ +TD  I+ ID   E K KE+M
Sbjct: 130 IRRDAMELAKKLEKNSEITEDDLSRQTKDIQDLTDHMIEKIDRSVEAKNKELM 182


>gi|42519369|ref|NP_965299.1| ribosome recycling factor [Lactobacillus johnsonii NCC 533]
 gi|227890234|ref|ZP_04008039.1| ribosome recycling factor [Lactobacillus johnsonii ATCC 33200]
 gi|268319254|ref|YP_003292910.1| hypothetical protein FI9785_769 [Lactobacillus johnsonii FI9785]
 gi|47116993|sp|P61305|RRF_LACJO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|41583657|gb|AAS09265.1| ribosome recycling factor [Lactobacillus johnsonii NCC 533]
 gi|227849236|gb|EEJ59322.1| ribosome recycling factor [Lactobacillus johnsonii ATCC 33200]
 gi|262397629|emb|CAX66643.1| frr [Lactobacillus johnsonii FI9785]
 gi|329667112|gb|AEB93060.1| ribosome recycling factor [Lactobacillus johnsonii DPC 6026]
          Length = 185

 Score =  144 bits (363), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 113/184 (61%), Gaps = 2/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+VI  +  KD M  +I+  +K++  +R G  + S+LD +KV  YG   PL Q+++V++ 
Sbjct: 3   NEVI--EKAKDNMKKSIAVFQKELGGIRAGVANASLLDGIKVNYYGVPTPLTQMSSVSIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+V+ +DK  +  +E  I  S+LG+ P  +G V+RI +P+ T ERR  + K     
Sbjct: 61  EARVLMVTPYDKSTLDDIEHAILASDLGITPANDGTVIRIVIPQLTGERRQEIAKQVGKL 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AEK KI+VRN+RRD MD LK+  K G  +ED   SLE  +QK+TD   K ID   ++K +
Sbjct: 121 AEKGKIAVRNVRRDAMDTLKRQEKDGDITEDEQRSLEKQVQKVTDDATKEIDKLADQKSQ 180

Query: 182 EIMH 185
           EI  
Sbjct: 181 EITQ 184


>gi|149369635|ref|ZP_01889487.1| ribosome releasing factor [unidentified eubacterium SCB49]
 gi|149357062|gb|EDM45617.1| ribosome releasing factor [unidentified eubacterium SCB49]
          Length = 192

 Score =  144 bits (363), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/184 (43%), Positives = 114/184 (61%), Gaps = 6/184 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N +ID  + K+ M +TI  LKK  + +R G+ +PSM+  V V  YGS  PL QVANV  
Sbjct: 13  INFIID--STKEAMDNTIVHLKKKFVNIRAGKATPSMVGSVMVNYYGSPTPLTQVANVNT 70

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++  +E+GIH +NLG NP+  G+ + I VP  TEERR  L K A A
Sbjct: 71  PDGMTITIAPWEKGLIPEIEKGIHLANLGFNPMNNGESVIITVPPLTEERRRELAKQAKA 130

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE SK+ VRN R++  + +K        SED+ A+LE D+QK+TD+ I  ID  F  K+
Sbjct: 131 EAEDSKVGVRNDRKNANNEIKNL----DVSEDLKANLEADVQKMTDNHITLIDELFSVKE 186

Query: 181 KEIM 184
           KEIM
Sbjct: 187 KEIM 190


>gi|295426323|ref|ZP_06818982.1| ribosome recycling factor [Lactobacillus amylolyticus DSM 11664]
 gi|295063996|gb|EFG54945.1| ribosome recycling factor [Lactobacillus amylolyticus DSM 11664]
          Length = 185

 Score =  144 bits (363), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  K+ M  +I   +K++ ++R G  + S+LD ++V  YG+  PL Q+++V++ EPR+L
Sbjct: 6   IQKAKENMEKSIKVFRKNLASIRAGVANASILDGIQVGYYGAPTPLKQISSVSIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D   +  +E  +  SNLGLNP  +G+V+R+ +P+ T ERR  + K     AE++K
Sbjct: 66  LITPYDINSLDDIEHALLASNLGLNPANDGKVIRLVIPQLTGERRQEIAKEVGKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RRD M+ LK+  K  + +ED   +LE ++QK+TD +IK ID   ++K+KEI  
Sbjct: 126 IAVRNVRRDAMNSLKRQLKDDEITEDEQRNLEKEVQKVTDDSIKEIDKIADDKRKEITQ 184


>gi|329893773|ref|ZP_08269861.1| Ribosome recycling factor [gamma proteobacterium IMCC3088]
 gi|328923496|gb|EGG30810.1| Ribosome recycling factor [gamma proteobacterium IMCC3088]
          Length = 185

 Score =  144 bits (363), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 111/174 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  +I  L  +   +RTGR  PS+LD +KVE YGS  PLNQVAN+ + + R L + VWD
Sbjct: 12  RMQKSIEALGHNFNKIRTGRAHPSLLDGIKVEYYGSDTPLNQVANINIEDARTLSLQVWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M+++VE+ I +S+LGLNP   G+V+RIP+P  TEE R   +K A A AE +++S+RN 
Sbjct: 72  RTMISAVEKAIMKSDLGLNPSSAGEVIRIPMPMLTEETRKGYIKQARAEAEAARVSLRNA 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD M  LK   K  + SED     ++++QK+TD  +K +D     K+ ++M  
Sbjct: 132 RRDAMSMLKDLVKEKEISEDDERRGQDEVQKLTDKMVKKVDELLAAKEADLMEI 185


>gi|224825016|ref|ZP_03698122.1| ribosome recycling factor [Lutiella nitroferrum 2002]
 gi|224602687|gb|EEG08864.1| ribosome recycling factor [Lutiella nitroferrum 2002]
          Length = 185

 Score =  144 bits (363), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 108/172 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++   K D+  +RTGR    +LD V V+ YGS VP+NQVANVT+++ R + V  W+
Sbjct: 12  KMQKSLEAFKNDLTKVRTGRAHTGILDHVMVDYYGSDVPVNQVANVTLIDARTIGVQPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+  +E+ I +S+LGLNP   G+++R+P+P  TEERR  L+K+    AE ++++VRNI
Sbjct: 72  KSMLGKIEKAIRDSDLGLNPASMGEIIRVPMPMLTEERRKDLIKLVRGEAEGARVAVRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  +  K   K    +ED     ++DIQK+TD  I  +D     K+ ++M
Sbjct: 132 RRDANNEFKNLLKDKSITEDDERRGQDDIQKLTDKYIAEVDKALAAKETDLM 183


>gi|291557942|emb|CBL35059.1| ribosome recycling factor [Eubacterium siraeum V10Sc8a]
          Length = 184

 Score =  144 bits (363), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 111/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   KD+MG  ++ ++ +  ++R GR +P++LD V V+ YG    +N +A V V E R+L
Sbjct: 5   INTAKDKMGKCVAAVETEYASIRAGRANPAVLDKVTVDYYGVPTQINAMAAVAVSEARVL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WD   + S+E+ I  S++G+ P  +G+ +RI  P+ TEERR  L K     AE+ K
Sbjct: 65  VITPWDASTLKSIEKAILASDIGITPTNDGKAIRITFPQLTEERRKELCKQVKKIAEEGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RRD M+  K  +K+ + +ED + + E D+QK+TD     +D+    K+KEIM
Sbjct: 125 VAVRNVRRDAMEKFKAMKKNSEITEDDLKNCEKDVQKLTDKYCDEMDAACSAKEKEIM 182


>gi|224540949|ref|ZP_03681488.1| hypothetical protein CATMIT_00100 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526100|gb|EEF95205.1| hypothetical protein CATMIT_00100 [Catenibacterium mitsuokai DSM
           15897]
          Length = 181

 Score =  144 bits (363), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 119/178 (66%), Gaps = 4/178 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K++M  ++     +++ +RTGR +PSMLD V VE YGS  PLNQVA ++V+E R L
Sbjct: 6   LEEAKEKMEKSVEAFSNELVNIRTGRANPSMLDRVMVEYYGSPTPLNQVAGISVVEGRQL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E GI++++LGL P  +G V+RI +P  TEERR  +VK  +  AE++K
Sbjct: 66  VIKPYDKNSMKDIEHGIYQADLGLTPQNDGTVIRIVIPPLTEERRKEMVKQVNKLAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRR+    ++K+ +    +ED V + + D+Q +T+  +K ID   +EK+K++M
Sbjct: 126 VALRNIRRNANTDVEKTGE----TEDEVKAGKEDVQDLTNEFVKKIDQIAKEKEKDLM 179


>gi|160947396|ref|ZP_02094563.1| hypothetical protein PEPMIC_01330 [Parvimonas micra ATCC 33270]
 gi|158446530|gb|EDP23525.1| hypothetical protein PEPMIC_01330 [Parvimonas micra ATCC 33270]
          Length = 185

 Score =  144 bits (363), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  ++ +M  +I   + ++ T+R GR +P++LD   V+ YG+  P+ QVA+++V E R+L
Sbjct: 6   INELERKMSKSIESYETELTTVRAGRANPTILDQFTVDYYGTETPIKQVASISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD  ++  +E+ +  SNLG+ P  +G+V+R+P P  TE+RR  LVKV   Y E SK
Sbjct: 66  VIQPWDASLITPIEKVLLASNLGITPSNDGKVIRLPFPALTEDRRKELVKVVKGYGENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RRDG+D LKK  K  + SED +   E ++QK+TD  IK ++   + K+KE+M  
Sbjct: 126 IAIRNLRRDGLDKLKKLEKDKEISEDELRQAEEEVQKVTDKFIKKVEDITKLKEKELMEI 185


>gi|256823124|ref|YP_003147087.1| ribosome recycling factor [Kangiella koreensis DSM 16069]
 gi|256796663|gb|ACV27319.1| ribosome recycling factor [Kangiella koreensis DSM 16069]
          Length = 185

 Score =  144 bits (363), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 78/182 (42%), Positives = 113/182 (62%), Gaps = 1/182 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   D RM  +I   K D+  +RTGR  PS+L+ + V  YG   P++QVA++ V E R
Sbjct: 4   DIQKDADQRMDKSIESYKGDLAKVRTGRAHPSLLEHIMVPYYGVDTPISQVASIGVQEGR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            LV+ ++DK  + + E+ I +S+LGL P V GQV+RI +P  +EERR   +KV    AE 
Sbjct: 64  TLVLQIFDKGAIEATEKAILKSDLGLTPNVAGQVIRIALPPLSEERRKEFIKVVKMEAEN 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VRNIRRD  + LK+  K  + SED +   E+ IQK+TD+ I  ID    EK+ E+M
Sbjct: 124 AKVAVRNIRRDANNSLKELEKEKEISEDDLRRAEDLIQKLTDTKIARIDEILAEKETELM 183

Query: 185 HF 186
             
Sbjct: 184 EI 185


>gi|167750047|ref|ZP_02422174.1| hypothetical protein EUBSIR_01015 [Eubacterium siraeum DSM 15702]
 gi|167657068|gb|EDS01198.1| hypothetical protein EUBSIR_01015 [Eubacterium siraeum DSM 15702]
 gi|291530445|emb|CBK96030.1| ribosome recycling factor [Eubacterium siraeum 70/3]
          Length = 184

 Score =  144 bits (363), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 111/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   KD+MG  ++ ++ +  ++R GR +P++LD V V+ YG    +N +A V V E R+L
Sbjct: 5   INTAKDKMGKCVAAVETEYASIRAGRANPAVLDKVTVDYYGVPTQINAMAAVAVSEARVL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WD   + S+E+ I  S++G+ P  +G+ +RI  P+ TEERR  L K     AE+ K
Sbjct: 65  VITPWDASTLKSIEKAILASDIGITPTNDGKAIRITFPQLTEERRKELCKQVKKIAEEGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RRD M+  K  +K+ + +ED + + E D+QK+TD     +D+    K+KEIM
Sbjct: 125 VAVRNVRRDAMEKFKAMKKNNEITEDDLKNCEKDVQKLTDKYCDEMDAACSAKEKEIM 182


>gi|167041121|gb|ABZ05881.1| putative Ribosome recycling factor [uncultured marine microorganism
           HF4000_001A02]
          Length = 185

 Score =  144 bits (362), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 112/174 (64%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   ++  + ++  +RTGR +P +L+ ++VE YGS +P+NQV+ V++ +PR++ +  ++
Sbjct: 12  RMDQAVAHTRMELAKVRTGRANPDLLNAIQVEYYGSMMPMNQVSTVSIPDPRLITLQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  +E+ I  SNLGL P   G  + IP+P  +EERR  L+K  H   E+ ++SVRN+
Sbjct: 72  KSLIPVIEKAIMNSNLGLTPSNNGNAVLIPIPALSEERRKDLIKYVHQVVEEGRVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD + H+K+  K    SED +   E ++Q +TD  +++++   E K+KE+M F
Sbjct: 132 RRDALHHVKEFGKEEHVSEDEIHRQETEMQTLTDKHVESLNEMQEHKEKELMAF 185


>gi|299147798|ref|ZP_07040861.1| ribosome recycling factor [Bacteroides sp. 3_1_23]
 gi|298513981|gb|EFI37867.1| ribosome recycling factor [Bacteroides sp. 3_1_23]
          Length = 186

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 112/178 (62%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+N +++M   I +L++ +  +R G+ S  +LD ++V++YGS VP++ VA +T  + R +
Sbjct: 8   LENAQEKMDMAIMYLEEALAHIRAGKASARLLDGIRVDSYGSMVPISNVAAITTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  VIKPWDKSMFRVIEKAIIDSDLGIMPENNGEMIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRDG+D LKK+ K G A ED   + E  +QKI D  IK ID    EK KEIM
Sbjct: 128 VSVRNARRDGIDALKKAVKDGLA-EDEQKNAEAKLQKIHDKYIKQIDDMLAEKDKEIM 184


>gi|262066278|ref|ZP_06025890.1| ribosome recycling factor [Fusobacterium periodonticum ATCC 33693]
 gi|291379973|gb|EFE87491.1| ribosome recycling factor [Fusobacterium periodonticum ATCC 33693]
          Length = 190

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 114/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+   ++R GR + +MLD VKVE YGS VPLNQ+ +V+  E R+L
Sbjct: 9   IKECEEKMLKTIESVKERFTSIRAGRANVAMLDGVKVENYGSDVPLNQIGSVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  +E+ +  +NLG+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VIDPWDKTLIPKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKK--SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK    K    SED +   E  +Q +TD  IK ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEETHVQTLTDKYIKEIDELLAKKEKEI 187


>gi|56412492|ref|YP_149567.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197361427|ref|YP_002141063.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|62900788|sp|Q5PD60|RRF_SALPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689912|sp|B5BAM9|RRF_SALPK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56126749|gb|AAV76255.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197092903|emb|CAR58332.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 185

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 109/174 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 12  RMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTLTPLRQLASVTVEDSRTLKINVFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M  +VE+ I  S+LGLNP   G  + +P+P  TEERR  L K+    AE+++++VRN+
Sbjct: 72  RSMGPAVEKAIMASDLGLNPSSAGTDICVPLPPLTEERRKDLTKIVRGEAEQARVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  D +K   K    SED     + ++QK+TD+ IK +D+   +K+ E+M F
Sbjct: 132 RRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDAALADKEAELMQF 185


>gi|294102175|ref|YP_003554033.1| ribosome recycling factor [Aminobacterium colombiense DSM 12261]
 gi|293617155|gb|ADE57309.1| ribosome recycling factor [Aminobacterium colombiense DSM 12261]
          Length = 186

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ + ++M   I  LK++ +++RTGR  P +++ ++V+ YGS  P+ Q+A V+V E R +
Sbjct: 6   IKTMSEKMEKVIEHLKEEFISIRTGRAHPGLVNDIRVDYYGSQTPIKQLATVSVPEARQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+ ++  +E+ I  S+LG+NP  +G+ +R+ +PE T+ERR+ L KV   YAE+++
Sbjct: 66  LIAPFDRSILKGIEKAIQASSLGINPQNDGENIRLTLPELTKERRIELSKVVSKYAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRNIRR+  D LKK  K    SED       D+Q ITD  IK ID   + K+KEI+ 
Sbjct: 126 IAVRNIRREVNDTLKKMEKDSVISEDEQRKYTKDVQDITDDFIKKIDEVLKVKEKEIIE 184


>gi|255659930|ref|ZP_05405339.1| ribosome recycling factor [Mitsuokella multacida DSM 20544]
 gi|260847801|gb|EEX67808.1| ribosome recycling factor [Mitsuokella multacida DSM 20544]
          Length = 185

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM  +I  LK +  +LR GR +PS+LD V V  YG+  P+NQ+A VTV EPRM+
Sbjct: 6   LASHEERMKKSIEALKHEFASLRAGRATPSLLDKVMVNYYGAPTPVNQIAKVTVPEPRMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+K ++  +E  I +S+LGL+P  +G  +R+ +P  T+ERR  LVK  +   E++K
Sbjct: 66  MIQPWEKSILHDIEVAIMKSDLGLSPNSDGTAIRLSIPALTQERRQELVKTVNKKTEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRDG + +KK  K+ + +ED     +  +QK+ D  +K  D+  E K+KE+M 
Sbjct: 126 VALRNIRRDGNEDIKKLEKAKEITEDESKRGQESMQKLVDKYVKLADAAKEVKEKEVME 184


>gi|154489842|ref|ZP_02030103.1| hypothetical protein PARMER_00071 [Parabacteroides merdae ATCC
           43184]
 gi|218258266|ref|ZP_03474668.1| hypothetical protein PRABACTJOHN_00323 [Parabacteroides johnsonii
           DSM 18315]
 gi|154089284|gb|EDN88328.1| hypothetical protein PARMER_00071 [Parabacteroides merdae ATCC
           43184]
 gi|218225609|gb|EEC98259.1| hypothetical protein PRABACTJOHN_00323 [Parabacteroides johnsonii
           DSM 18315]
          Length = 187

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 111/173 (64%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   I +L + +  +R G+ +P +LD V+V  YG+ VPL  VA VTV + R ++++ W
Sbjct: 13  EKMTFAIEYLDEQLSHIRAGKANPKILDCVRVMYYGAPVPLTNVATVTVPDARTIMITPW 72

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K+++  +E+GI +S +G+ P   G+V+R+ +P  TEERR  L K +   AE +KIS+RN
Sbjct: 73  EKKIIKDIEKGIMDSEVGITPENNGEVIRLGIPPLTEERRRLLAKQSKQEAETAKISIRN 132

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            RRD ++ LKKS K+    ED+    E ++QK+ D  IK +D  +  K+KEIM
Sbjct: 133 ARRDAIEQLKKSIKTDGTPEDVEKDAEAEVQKVHDKYIKKVDELYAAKEKEIM 185


>gi|148244406|ref|YP_001219100.1| ribosome recycling factor [Candidatus Vesicomyosocius okutanii HA]
 gi|166231527|sp|A5CXD6|RRF_VESOH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146326233|dbj|BAF61376.1| ribosome recycling factor [Candidatus Vesicomyosocius okutanii HA]
          Length = 185

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 76/179 (42%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           QN +++M  +I+ LK     +R  R  PS+L+ + +  YGS VPL+QVAN++  + R L 
Sbjct: 7   QNSQNKMNKSINSLKNAFSKIRASRAHPSLLEQIHINYYGSMVPLSQVANISTEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
            S W+K+MV+ +E+ I  S+LGLNP   GQV+RI +P  T+ERR  LVK+    AEK+KI
Sbjct: 67  ASPWEKDMVSVIEKAIMTSDLGLNPQTIGQVIRIHLPPLTQERRGELVKIIKDEAEKAKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD     K+  K  + S+D     E DIQKITD  IK I+    +K+  ++  
Sbjct: 127 AIRNIRRDANSDFKELLKEKEISKDEARKAEYDIQKITDEYIKKIEINLNKKEDSLLEI 185


>gi|167630327|ref|YP_001680826.1| ribosome recycling factor [Heliobacterium modesticaldum Ice1]
 gi|238687988|sp|B0THE0|RRF_HELMI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167593067|gb|ABZ84815.1| ribosome recycling factor [Heliobacterium modesticaldum Ice1]
          Length = 185

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 113/176 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +D+M  T+  L+K+   +R GR +P++L+ V VE YG+  P+NQ+AN++  E R+LV+  
Sbjct: 10  EDKMKKTVEALRKEYQHIRAGRANPALLEKVTVEYYGAPTPVNQLANISAPEARLLVIQP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK ++ ++E+ I +S+LGL P  +G V+R+ +P+ T+ERR  LVK     AE+ ++ +R
Sbjct: 70  WDKSVLPALEKAILKSDLGLTPTSDGAVIRLVIPQLTQERRSELVKTVKKRAEEHRVILR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRD  + +K  +K    SED     + +IQK+TD  I+ +D   E K+ EIM  
Sbjct: 130 NLRRDANEDVKDLQKEHIISEDEGKRAQEEIQKLTDKYIREVDQVAERKEAEIMEV 185


>gi|150390448|ref|YP_001320497.1| ribosome recycling factor [Alkaliphilus metalliredigens QYMF]
 gi|166991551|sp|A6TRM0|RRF_ALKMQ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149950310|gb|ABR48838.1| ribosome recycling factor [Alkaliphilus metalliredigens QYMF]
          Length = 185

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 114/176 (64%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++++M  T+  LK D  ++R G+ +PSMLD + V+ YGS  PL QVA+V+  EPR+L++ 
Sbjct: 9   LEEKMTKTLGVLKDDFNSIRAGKANPSMLDRITVDYYGSITPLKQVASVSAPEPRLLIIQ 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D  ++  +E+ +  S+LGLNP  +G+++R+ +P+ TEERR  L KV    AE+ ++++
Sbjct: 69  PYDPSVINGIEKALMMSDLGLNPSNDGKIIRLNIPQLTEERRKELTKVVKRVAEEGRVAL 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RN RRD  + LKK  K  + +ED +   + ++QKITD   K +D    +K+ EI+ 
Sbjct: 129 RNGRRDANEQLKKMEKDSELTEDDLKQAQEEVQKITDKFNKQVDEMLVKKELEILE 184


>gi|312139239|ref|YP_004006575.1| ribosome recycling factor [Rhodococcus equi 103S]
 gi|311888578|emb|CBH47890.1| ribosome recycling factor [Rhodococcus equi 103S]
          Length = 185

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 108/175 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   I+  K D+ ++RTGR +P M + V VE YGS  P+ Q+A++ V EPRM+++  
Sbjct: 10  EEKMEKAITVAKDDLGSIRTGRANPGMFNRVVVEYYGSMTPITQLASINVPEPRMVIIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++   +  +E  I  S+LG+NP  +G ++RI VP+ TEERR   VK A +  E +K+++R
Sbjct: 70  YEASQLGPIENAIRNSDLGVNPSNDGSIIRISVPQLTEERRREFVKQAKSKGEDAKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+RR  MD L + +K G+A ED V   E ++ K T   +  ID   + K+ E+M 
Sbjct: 130 NVRRKTMDELSRIQKDGEAGEDEVGRAEKELDKTTSRYVSQIDELVKHKEAELME 184


>gi|95928705|ref|ZP_01311451.1| ribosome recycling factor [Desulfuromonas acetoxidans DSM 684]
 gi|95135050|gb|EAT16703.1| ribosome recycling factor [Desulfuromonas acetoxidans DSM 684]
          Length = 185

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 111/172 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   I  LK+++  +RTGR S S+LD V V+ YG+  PLNQV  ++V E R++ +  W+K
Sbjct: 13  MDGAIDALKRELSKVRTGRASVSLLDEVCVDYYGTPTPLNQVGTLSVPEARLITIQPWEK 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +E+ I +S+LGL P  +G ++RI +P  TEERR  +VK+  + +E++KIS+R+ R
Sbjct: 73  NLLPEIEKAIFKSDLGLTPSSDGDLIRISIPPLTEERRKEMVKLVKSKSEETKISIRSSR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RDG D LKK  K  + +ED +   E ++Q +TD  ++  D    EK+KE+M 
Sbjct: 133 RDGNDALKKLEKDKEITEDDLKRSEKEMQDLTDKYVQKCDDIVAEKEKELME 184


>gi|328954577|ref|YP_004371911.1| Ribosome-recycling factor [Desulfobacca acetoxidans DSM 11109]
 gi|328454901|gb|AEB10730.1| Ribosome-recycling factor [Desulfobacca acetoxidans DSM 11109]
          Length = 185

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ ++ +M   +  L++D   +RTGR S ++L+ +K+EAYG+ +P++QVA++   EPR+L
Sbjct: 6   IKEMQRKMDRALEVLRQDFSRIRTGRASVALLEGIKMEAYGATMPISQVASLAAPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD  +++ +E+ + +S+LGL P  +G+++RIP+P  T ERR  LVK      E+SK
Sbjct: 66  TIQPWDSSLMSDLEKALLKSDLGLTPSNDGKIIRIPIPPLTTERRKELVKTTKKMTEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR+  + LK+ +K  + SED V   + ++QK TD  IK  D    EK+KEIM F
Sbjct: 126 VALRNLRREANELLKELKKEKQISEDEVFKAQEEVQKATDDYIKKADGLAAEKEKEIMSF 185


>gi|257065047|ref|YP_003144719.1| ribosome recycling factor [Slackia heliotrinireducens DSM 20476]
 gi|256792700|gb|ACV23370.1| ribosome recycling factor [Slackia heliotrinireducens DSM 20476]
          Length = 184

 Score =  144 bits (362), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 104/171 (60%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M + I  LK    ++RTGR +  +LD ++V+ YG   P+NQ+A V V E  ML V  WDK
Sbjct: 12  MDEAIDNLKTAFASVRTGRANAMVLDKIRVDYYGVPTPINQMAAVKVPEAHMLTVEPWDK 71

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M+ +VE  I  S+LG+ P  +G V+R+P P  TEERR  L K  H YAE+ +I++RN+R
Sbjct: 72  SMLRAVEAAIMASDLGITPSNDGHVIRLPFPVLTEERRKELAKTCHTYAEECRIAIRNVR 131

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R+    + K +K+ +  ED     E  +QK+TDS +K +D   + K+ E+M
Sbjct: 132 REANAKIDKGKKASEIPEDDARRGEEQVQKLTDSYVKKVDELLKAKEAEVM 182


>gi|146318980|ref|YP_001198692.1| ribosome recycling factor [Streptococcus suis 05ZYH33]
 gi|146321189|ref|YP_001200900.1| ribosome recycling factor [Streptococcus suis 98HAH33]
 gi|253752048|ref|YP_003025189.1| ribosome recycling factor [Streptococcus suis SC84]
 gi|253753873|ref|YP_003027014.1| ribosome recycling factor [Streptococcus suis P1/7]
 gi|253755251|ref|YP_003028391.1| ribosome recycling factor [Streptococcus suis BM407]
 gi|302024058|ref|ZP_07249269.1| ribosome recycling factor [Streptococcus suis 05HAS68]
 gi|330832480|ref|YP_004401305.1| ribosome recycling factor [Streptococcus suis ST3]
 gi|166231519|sp|A4W2B1|RRF_STRS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231521|sp|A4VW03|RRF_STRSY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145689786|gb|ABP90292.1| Ribosome recycling factor [Streptococcus suis 05ZYH33]
 gi|145691995|gb|ABP92500.1| Ribosome recycling factor [Streptococcus suis 98HAH33]
 gi|251816337|emb|CAZ51968.1| ribosome recycling factor [Streptococcus suis SC84]
 gi|251817715|emb|CAZ55464.1| ribosome recycling factor [Streptococcus suis BM407]
 gi|251820119|emb|CAR46427.1| ribosome recycling factor [Streptococcus suis P1/7]
 gi|319758416|gb|ADV70358.1| ribosome recycling factor [Streptococcus suis JS14]
 gi|329306703|gb|AEB81119.1| ribosome recycling factor [Streptococcus suis ST3]
          Length = 185

 Score =  144 bits (362), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 114/175 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM  +   L ++   +R GR + S+LD + VE YGS  PLNQ+A +TV E R+L+++ 
Sbjct: 10  QERMNQSHQSLAREFSHIRAGRANASLLDRISVEYYGSPTPLNQLAGITVPEARVLLITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  +ER ++ S+LGL P  +G V+R+ +P  TEE R  L K      E SK+++R
Sbjct: 70  FDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKKVGENSKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD MD  KK+ K+ + +ED + +LE DIQK+TD  IK ID    +K+KE++ 
Sbjct: 130 NIRRDAMDEAKKAEKAKEITEDELKTLEKDIQKVTDDAIKTIDKMTADKEKELLE 184


>gi|254467840|ref|ZP_05081246.1| ribosome recycling factor [beta proteobacterium KB13]
 gi|207086650|gb|EDZ63933.1| ribosome recycling factor [beta proteobacterium KB13]
          Length = 180

 Score =  144 bits (362), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 76/180 (42%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ +K +M  TI  LK D   +RTGR    +LD + V+ YG+  PL+Q+ANVT+ +   +
Sbjct: 1   MEELKIKMEKTIERLKNDFSKIRTGRAHTGLLDHLSVDYYGTITPLSQMANVTLGDNVTI 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  +DK   +++E+ I +S+LGLNP V G ++R+P+P  TEERR  L+KV  +  E +K
Sbjct: 61  NVQPYDKTQTSAIEKVIRDSDLGLNPAVNGDLIRVPMPPLTEERRKDLIKVVKSEGENAK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RNIRRDG D LKK  K    SED     +  IQ +TD  IK+ID+    K+K+++  
Sbjct: 121 ISIRNIRRDGNDELKKQLKEKLISEDDEKRDQAKIQTLTDEFIKSIDNLITSKEKDLLEI 180


>gi|167626815|ref|YP_001677315.1| ribosome recycling factor [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667396|ref|ZP_04754974.1| ribosome recycling factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875945|ref|ZP_05248655.1| ribosome recycling factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|189044055|sp|B0U0Z8|RRF_FRAP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167596816|gb|ABZ86814.1| ribosome recycling factor [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254841966|gb|EET20380.1| ribosome recycling factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 185

 Score =  144 bits (362), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  T+  L  D+  +RTGR  P +L  V ++ YGS  P+ QVANVTVL+ R L
Sbjct: 6   LKDAENRMSKTLEVLADDLAKIRTGRAHPDILAHVTIDYYGSATPITQVANVTVLDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K +   +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+  +  E  +
Sbjct: 66  GITPWEKGLAGKIEKAIITSDLGLNPTNLGDSLRVPMPALNEERRKELVKLVKSETESGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD    +K+  K  + +ED     E++IQKITD  I   D+   +K++++M
Sbjct: 126 VSIRNIRRDANGDIKELLKEKEITEDEAKRAEDNIQKITDKMIAQADALAVKKEQDLM 183


>gi|320352945|ref|YP_004194284.1| ribosome recycling factor [Desulfobulbus propionicus DSM 2032]
 gi|320121447|gb|ADW16993.1| ribosome recycling factor [Desulfobulbus propionicus DSM 2032]
          Length = 185

 Score =  143 bits (361), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 116/183 (63%), Gaps = 2/183 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
            ++ID   ++++M  +   LK+D++ +RTGR S S+LD +KV AYGS + L+QV  +T+ 
Sbjct: 3   TKIID--QLREKMTASSEALKRDLVKIRTGRASLSLLDGIKVNAYGSQMSLDQVGTLTIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E  M+ +  WD +++ ++E+ I  S LGL P  +G V+R+ +P  T ERR  LVK     
Sbjct: 61  ENNMIAIKPWDPQVLPAIEKAILASGLGLTPASDGNVVRLTIPPLTGERRKELVKQVKKI 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E+ K+++RNIRRD ++ LKK +K  + SED +  L+ + QK+TD  I  ID     K+K
Sbjct: 121 GEEYKVAIRNIRRDAIETLKKMKKDKELSEDELFRLQEEAQKVTDGYIGQIDEITGGKEK 180

Query: 182 EIM 184
           E+M
Sbjct: 181 EVM 183


>gi|291563192|emb|CBL42008.1| ribosome recycling factor [butyrate-producing bacterium SS3/4]
          Length = 184

 Score =  143 bits (361), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 112/179 (62%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+  +++M  +I  L  +  ++R GR +P +LD +KV+ YG+  P+ QV N++V E RM
Sbjct: 4   ELKVYEEKMEKSIDALLNEYASIRAGRANPHVLDKIKVDYYGTPTPIQQVGNISVPEARM 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +++  W+K ++  +E+ I  S LG+NP  +G V+R+  PE TEERR  L K      + +
Sbjct: 64  ILIQPWEKSLIRPIEKAIQTSELGINPSNDGSVIRLVFPELTEERRKELAKDVKKKGDGA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           K+++RNIRRD  +  KK  KS + SED +  L   +QK+TD +I+ ID   E K KEI+
Sbjct: 124 KVAIRNIRRDANEAFKKMEKSDEISEDDLKELTEKVQKLTDKSIEKIDKAVENKTKEIL 182


>gi|223994729|ref|XP_002287048.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220978363|gb|EED96689.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 179

 Score =  143 bits (361), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 116/175 (66%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + ++RM  T++ L +++ T+RTGR +P+MLD V+ + YG+  PL+Q+A ++V   + L V
Sbjct: 2   DCEERMDKTMASLAENLATIRTGRANPNMLDRVECDYYGATTPLSQMATISVPSSQQLQV 61

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S +DK ++  +E+ I  S LG  P  +G V+RI +P+ TEERR  L+K   +  E++K++
Sbjct: 62  SPFDKSVLNDIEKAIIYSGLGFTPNNDGSVIRINIPQLTEERRKELLKQCKSIGEEAKVA 121

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +RNIRRDG+D++KK  K+G   +D     ++ IQK TD  +K ID    +K+KE+
Sbjct: 122 IRNIRRDGVDNIKKMEKNGDLGKDQALDGQDAIQKSTDEHVKMIDETVAKKEKEV 176


>gi|149194777|ref|ZP_01871872.1| ribosome recycling factor [Caminibacter mediatlanticus TB-2]
 gi|149135200|gb|EDM23681.1| ribosome recycling factor [Caminibacter mediatlanticus TB-2]
          Length = 184

 Score =  143 bits (361), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 110/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M  +I  LKKD+ TLRTG+VS  +LD VKVE YG+  PLNQVAN+  ++   +V+S 
Sbjct: 9   KEHMQKSIEVLKKDLNTLRTGKVSIHVLDGVKVEYYGAPTPLNQVANINAVDATTIVISP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK ++  +E+ I E+N+G NP  +G  +++  P  TEE R    K A  + EK+KI++R
Sbjct: 69  WDKSIINDIEKAIQEANVGANPNNDGDTIKLYFPPMTEEERKKQAKKAKEFGEKAKIAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRR+  D +KK  K+ + +ED      + +Q+ITD  IK +D    +K  ++M
Sbjct: 129 NIRREANDEIKKMFKNKEITEDDQKRGLDKVQEITDEFIKKVDEIVNKKIDDVM 182


>gi|124267165|ref|YP_001021169.1| ribosome recycling factor [Methylibium petroleiphilum PM1]
 gi|166230798|sp|A2SH95|RRF_METPP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|124259940|gb|ABM94934.1| ribosome recycling factor [Methylibium petroleiphilum PM1]
          Length = 186

 Score =  143 bits (361), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 104/168 (61%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
           +I   K ++  +RTGR  P +LD V VE YGS V ++QVANV++L+ R + V  W+K M 
Sbjct: 17  SIESFKSELQKIRTGRAHPGILDQVHVEYYGSMVSISQVANVSLLDARTISVQPWEKGMG 76

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
             +E+ I ES+LGLNP  +G++LR+P+P   EERR  L KV     E ++I+VRN+RRD 
Sbjct: 77  PKIEKAIRESDLGLNPSSQGELLRVPMPALNEERRRDLTKVVRGAGEDARIAVRNLRRDA 136

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            D  KK  K    SED      +++QK+TD  I  ID   + K+ EI+
Sbjct: 137 NDQAKKLLKDKAISEDDERRSLDEVQKLTDRVIAEIDRLVQSKEAEIL 184


>gi|260060696|ref|YP_003193776.1| ribosome recycling factor [Robiginitalea biformata HTCC2501]
 gi|88784826|gb|EAR15995.1| ribosome recycling factor [Robiginitalea biformata HTCC2501]
          Length = 184

 Score =  143 bits (361), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 112/178 (62%), Gaps = 4/178 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K+ M + IS L+K+++ +R GR SPSML  V V+ YGS  PLNQ++NV   + R +
Sbjct: 9   LDSAKENMDNAISHLEKELVKIRAGRASPSMLSSVMVDYYGSQTPLNQMSNVNTPDARTI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  W+K M+ ++E  I  +NLG NP+  G+++ I VP  TEERR  LVK A A AE++K
Sbjct: 69  SVQPWEKAMIPNIETAITNANLGFNPMNNGEMVIINVPPLTEERRKQLVKQAKAEAEEAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+R  R+D      K  K+   SED+  + E DIQ++TD+  + +D   E K+ EIM
Sbjct: 129 VSIRAARQDA----NKEIKALDISEDLEQNAEIDIQELTDTYTERVDGILEHKEAEIM 182


>gi|333029799|ref|ZP_08457860.1| Ribosome-recycling factor [Bacteroides coprosuis DSM 18011]
 gi|332740396|gb|EGJ70878.1| Ribosome-recycling factor [Bacteroides coprosuis DSM 18011]
          Length = 185

 Score =  143 bits (361), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 72/168 (42%), Positives = 108/168 (64%), Gaps = 1/168 (0%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
            I +L++ +  +R G+ +P +LD ++V++YGS +P+N VA VT  + R +++  WDK M 
Sbjct: 17  AIDYLEESLSHIRAGKANPKLLDGIRVDSYGSLMPINNVAAVTTPDARSILIKPWDKSMF 76

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
           + +E+ I +S+LG+ P   G+V+RI +P  TEERR+ L K      E +KISVRN RRDG
Sbjct: 77  SVIEKAIIDSDLGIMPENNGEVIRIGIPPLTEERRIQLTKQCRGEGETAKISVRNARRDG 136

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +D+LKK+ K G   ED   S E  +QK+ D  IK I+    EK +EIM
Sbjct: 137 IDYLKKAVKEG-LPEDAQKSGEEKLQKLHDKFIKKIEELLNEKDQEIM 183


>gi|307152127|ref|YP_003887511.1| ribosome recycling factor [Cyanothece sp. PCC 7822]
 gi|306982355|gb|ADN14236.1| ribosome recycling factor [Cyanothece sp. PCC 7822]
          Length = 182

 Score =  143 bits (361), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 111/177 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  +++ M  TI   ++   T+RTGR + S+LD V VE YG+  PL  +AN+T  +   +
Sbjct: 3   LAEVQENMQKTIEATQRSFNTIRTGRANASLLDRVTVEYYGTETPLKSLANITTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  +  +E+ I  S++GL P  +GQ++R+ +P  T +RR  LVK+A   AE+ K
Sbjct: 63  AIQPYDRSSLGKIEKAIQMSDVGLTPNNDGQIIRLNIPPLTSDRRKELVKLAGKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VRNIRRD +D ++K  KS + SED   +L++DIQKITD     ID   + K+K+I
Sbjct: 123 VAVRNIRRDAIDAIRKQEKSHEISEDEARNLQDDIQKITDEYNAKIDELLKAKEKDI 179


>gi|15806522|ref|NP_295233.1| ribosome recycling factor [Deinococcus radiodurans R1]
 gi|22001957|sp|Q9RU82|RRF_DEIRA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|6459273|gb|AAF11077.1|AE001995_2 ribosome recycling factor [Deinococcus radiodurans R1]
          Length = 183

 Score =  143 bits (361), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 115/176 (65%), Gaps = 3/176 (1%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + +++M   I   + ++  LRTGR +P +L  + V+ YGS +P++QVA++T  +PR LV+
Sbjct: 10  DTREKMNKAIEAFENNLSVLRTGRANPGILKKIVVDYYGSQMPIDQVASITTPDPRTLVI 69

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + WD+  +  +E+ I +S+LGLNP  +G  + I +P  TEERR  LVK A  YAE ++I+
Sbjct: 70  TPWDRGALNPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKNYAEDARIA 129

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VRN+R+  +D +KK    G   ED +   E D+QKITD  +  ++S F++K++EI+
Sbjct: 130 VRNLRKHALDEVKKVEGLG---EDEIKRGEADVQKITDEYVARVESVFQKKEQEIL 182


>gi|332140473|ref|YP_004426211.1| ribosome recycling factor [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|238693254|sp|B4RVI6|RRF_ALTMD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|327550495|gb|AEA97213.1| ribosome recycling factor [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 185

 Score =  143 bits (361), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 109/177 (61%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + ++RM  ++  LK     +RTGR  PS+LD + V  YG   PL QVANV   + R L +
Sbjct: 8   DAQERMEKSLVALKGQFSKIRTGRAHPSLLDGIMVPYYGVDTPLKQVANVVAEDSRTLAL 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +V+DK  + +VE+ I +S+LGLNP+  G  +RIP+P  TEERR  L++V    AE  +++
Sbjct: 68  TVFDKSAIQAVEKAIMQSDLGLNPMSAGGSIRIPLPPLTEERRKDLIRVVRNEAEGGRVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD    +K   K  + SED   + E +IQ IT+  IK +DS   +K+KE+M 
Sbjct: 128 IRNIRRDANGDVKDLLKEKEISEDESRAAEENIQSITNEFIKKVDSLLADKEKELME 184


>gi|238854749|ref|ZP_04645079.1| ribosome recycling factor [Lactobacillus jensenii 269-3]
 gi|260663981|ref|ZP_05864834.1| ribosome recycling factor [Lactobacillus jensenii SJ-7A-US]
 gi|282932860|ref|ZP_06338257.1| ribosome recycling factor [Lactobacillus jensenii 208-1]
 gi|313472270|ref|ZP_07812762.1| ribosome recycling factor [Lactobacillus jensenii 1153]
 gi|238832539|gb|EEQ24846.1| ribosome recycling factor [Lactobacillus jensenii 269-3]
 gi|239529668|gb|EEQ68669.1| ribosome recycling factor [Lactobacillus jensenii 1153]
 gi|260561867|gb|EEX27836.1| ribosome recycling factor [Lactobacillus jensenii SJ-7A-US]
 gi|281302895|gb|EFA95100.1| ribosome recycling factor [Lactobacillus jensenii 208-1]
          Length = 185

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 113/173 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M  +I+  +K++  +R G  + S+L+ VKV+ YG   PL Q+++VT+ E R+L+V+ 
Sbjct: 10  KENMNKSIAVYQKELGNIRAGVANASLLEGVKVDYYGVPTPLTQMSSVTIPEARVLLVTP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  + ++E  +  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++KI++R
Sbjct: 70  YDKSSLDNIEHALLASDLGLTPANDGNVIRLVIPQLTGERREEIAKQVGKQAEQAKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           N+RR+ MD LKK  K+G  +ED    LE D+QK+TD   K +D   +EK+KEI
Sbjct: 130 NVRREAMDSLKKQEKNGDITEDEQKRLEKDVQKVTDDATKRVDQLADEKRKEI 182


>gi|217072182|gb|ACJ84451.1| unknown [Medicago truncatula]
 gi|217072782|gb|ACJ84751.1| unknown [Medicago truncatula]
          Length = 262

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 116/176 (65%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K RM  T+  +K +  ++RTGR +PSMLD ++VE YGS V L  +A ++  +   L+V
Sbjct: 85  DVKSRMERTLDNVKTNFSSIRTGRATPSMLDKIEVEYYGSPVSLKTIAQISTPDASSLLV 144

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S +DK  + ++E+ I  S++G+ P  +G+V+R+ +P+ T +RR  L K+     E+ K++
Sbjct: 145 SPYDKSSLKAIEKAIVNSDVGMTPNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEGKVA 204

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +RNIRRD +   +K  K  K SED V  L +D+QK+TD  IK +D+ +++K+KE++
Sbjct: 205 LRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLTDDYIKKVDALYKQKEKELL 260


>gi|332883553|gb|EGK03836.1| ribosome-recycling factor [Dysgonomonas mossii DSM 22836]
          Length = 187

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 113/177 (63%), Gaps = 1/177 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  + +M  ++ FL + +  +R G+ +P +LD +K+E YGS  PL+ VA +   + R ++
Sbjct: 10  QKAEAKMLASVEFLDETLSRIRAGKANPHILDGIKLEYYGSITPLSGVAAINTPDARTII 69

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+M+  VE+ I  S++G+ P   G+V+R+ +P  TEERR  LVK A   AE +K+
Sbjct: 70  VQPWEKQMLKEVEKAILNSDVGITPDNNGEVIRLSIPPLTEERRKLLVKQAKQEAEDAKV 129

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           SVRN RRD +D +KKS K G A ED+    EN++QK+ D  IK ID  F  K+KEI+
Sbjct: 130 SVRNARRDAIDTIKKSVKEGLA-EDVAKDGENEMQKLHDKYIKKIDDLFALKEKEIL 185


>gi|294056380|ref|YP_003550038.1| ribosome recycling factor [Coraliomargarita akajimensis DSM 45221]
 gi|293615713|gb|ADE55868.1| ribosome recycling factor [Coraliomargarita akajimensis DSM 45221]
          Length = 185

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/157 (46%), Positives = 103/157 (65%), Gaps = 1/157 (0%)

Query: 27  TLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHES 86
           +L TG+ SP+MLD VKV+AYGS V L +VA VT  + R +VV  WDK ++  VE+GI ++
Sbjct: 27  SLHTGKASPAMLDSVKVDAYGSTVTLKEVAAVTTPDARTIVVQPWDKSVIREVEKGIIDA 86

Query: 87  NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKS 146
           NLG NP+V+G +LR+PVPE T ERR  L K A   AE  ++ +R++RRDG+D LK ++  
Sbjct: 87  NLGFNPLVDGGILRVPVPELTGERRAELAKQAGGMAEDGRVRIRSVRRDGLDLLKSAKDD 146

Query: 147 GKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           G  SED V   E +IQ   D  I  I+    +K+ ++
Sbjct: 147 G-LSEDDVKRYEKEIQTEHDKYIAEINDQLSKKEADL 182


>gi|295114850|emb|CBL35697.1| ribosome recycling factor [butyrate-producing bacterium SM4/1]
          Length = 181

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 108/174 (62%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            +++M  +   L  +  ++R GR +P +LD ++V+ YG+  PL QVAN++V EPRM+ + 
Sbjct: 8   FEEKMDKSYDALLNEFSSIRAGRANPHVLDKLRVDYYGAPTPLQQVANISVPEPRMIQIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            W+K +V ++E+ I  S+LG+NP  +G V+R+  PE TEERR  L K      E +K++V
Sbjct: 68  PWEKSLVKAIEKAILTSDLGINPSNDGSVIRLIFPELTEERRKELAKDIKKKGEGAKVAV 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RNIRRD  D  KK  K+ + SED ++  E  IQK+TD  I  ID   E K K +
Sbjct: 128 RNIRRDANDTFKKMEKANEISEDDLSDAEEKIQKMTDKMIDKIDKAVETKTKRL 181


>gi|300361909|ref|ZP_07058086.1| ribosome recycling factor [Lactobacillus gasseri JV-V03]
 gi|300354528|gb|EFJ70399.1| ribosome recycling factor [Lactobacillus gasseri JV-V03]
          Length = 185

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 115/184 (62%), Gaps = 2/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+VI  +  KD M  +I+  +K++  +R G  + S+L+ +KV+ YG   PL Q+++V++ 
Sbjct: 3   NEVI--EKAKDNMKKSIAVFQKELGGIRAGVANASLLEGIKVDYYGVPTPLTQMSSVSIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+V+ +DK  +  +E  I  S+LG+ P  +G V+RI +P+ T ERR  + K     
Sbjct: 61  EARVLMVTPYDKSSLDDIEHAILASDLGITPANDGSVIRIVIPQLTGERRQEIAKQVGKL 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AEK KI+VRN+RRD MD LK+  K+G  +ED   SLE  +QK+TD   K ID   ++K +
Sbjct: 121 AEKGKIAVRNVRRDAMDTLKRQEKNGDITEDEQRSLEKQVQKVTDDATKEIDKLADQKSQ 180

Query: 182 EIMH 185
           EI  
Sbjct: 181 EITQ 184


>gi|78222467|ref|YP_384214.1| ribosome recycling factor [Geobacter metallireducens GS-15]
 gi|123572206|sp|Q39W85|RRF_GEOMG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78193722|gb|ABB31489.1| ribosome recycling factor [Geobacter metallireducens GS-15]
          Length = 185

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 113/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + ++K  M  ++  L+++   +RTGR +  +LD +KVE YG+  PL+QVA ++V EPR +
Sbjct: 6   IADMKAHMEKSVDALRREYQKVRTGRATTGLLDDIKVEYYGNPSPLSQVATLSVPEPRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+ +++  +E+ I  +NLG  P  +G+ +RI +P  TEERR  +VK     AE +K
Sbjct: 66  TIQPWEAKLIPVIEKAIMNANLGFTPANDGKTIRISLPPLTEERRKEIVKTLKKMAEDTK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRDG+D LKK  K  K SED +   E ++Q +T++ +  ++     K+KE++ 
Sbjct: 126 VAVRNIRRDGIDSLKKLEKDKKISEDDLKRAEKEVQDVTNTFVAKVEEVLTHKEKEVLE 184


>gi|15639592|ref|NP_219042.1| ribosome recycling factor [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025830|ref|YP_001933602.1| ribosome recycling factor [Treponema pallidum subsp. pallidum SS14]
 gi|6094140|sp|O83613|RRF_TREPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689331|sp|B2S3J4|RRF_TREPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|3322898|gb|AAC65577.1| ribosome recycling factor [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189018405|gb|ACD71023.1| ribosome recycling factor [Treponema pallidum subsp. pallidum SS14]
 gi|291059975|gb|ADD72710.1| ribosome recycling factor [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 183

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 114/173 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++S L++   TLRT R +  +LD + V+ Y     L+QVA V+V E R++++  WD
Sbjct: 10  KMKKSLSALQEGFNTLRTERATAHLLDQITVDYYQQPTALSQVATVSVPEARLIIIQPWD 69

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++A +ER I +S L LNP  +G+V+R+ +P  T+ERR  LV+ A A AE++++++RNI
Sbjct: 70  KTLLADIERAILKSKLSLNPSNDGKVIRLVIPPLTQERRKELVRQARALAEQARVAIRNI 129

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR+G++  K+  K G  SED + + E   QK TD+++ ++  +  EK+K+I+ 
Sbjct: 130 RREGIEEAKRGHKEGLLSEDALKAAEEAFQKATDASVADVARYLAEKEKDILE 182


>gi|296876070|ref|ZP_06900124.1| ribosome recycling factor [Streptococcus parasanguinis ATCC 15912]
 gi|312868288|ref|ZP_07728488.1| ribosome recycling factor [Streptococcus parasanguinis F0405]
 gi|296432781|gb|EFH18574.1| ribosome recycling factor [Streptococcus parasanguinis ATCC 15912]
 gi|311096033|gb|EFQ54277.1| ribosome recycling factor [Streptococcus parasanguinis F0405]
          Length = 185

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLGREFGSIRAGRANASLLDRIFVEYYGVETPLNQLASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E  I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LITPFDKSSLKDIEHSINASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD MD  KK  K+ + +ED +  LE +IQK+TD  +K++D     K+KE+M
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKGLEKEIQKVTDDAVKHVDEMTAHKEKELM 183


>gi|160885096|ref|ZP_02066099.1| hypothetical protein BACOVA_03094 [Bacteroides ovatus ATCC 8483]
 gi|237714925|ref|ZP_04545406.1| ribosome recycling factor [Bacteroides sp. D1]
 gi|237718246|ref|ZP_04548727.1| ribosome recycling factor [Bacteroides sp. 2_2_4]
 gi|260174237|ref|ZP_05760649.1| ribosome recycling factor [Bacteroides sp. D2]
 gi|262406807|ref|ZP_06083356.1| ribosome recycling factor [Bacteroides sp. 2_1_22]
 gi|293368761|ref|ZP_06615365.1| ribosome recycling factor [Bacteroides ovatus SD CMC 3f]
 gi|294647222|ref|ZP_06724821.1| ribosome recycling factor [Bacteroides ovatus SD CC 2a]
 gi|294809166|ref|ZP_06767882.1| ribosome recycling factor [Bacteroides xylanisolvens SD CC 1b]
 gi|298483675|ref|ZP_07001850.1| ribosome recycling factor [Bacteroides sp. D22]
 gi|315922506|ref|ZP_07918746.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156109446|gb|EDO11191.1| hypothetical protein BACOVA_03094 [Bacteroides ovatus ATCC 8483]
 gi|229445250|gb|EEO51041.1| ribosome recycling factor [Bacteroides sp. D1]
 gi|229452430|gb|EEO58221.1| ribosome recycling factor [Bacteroides sp. 2_2_4]
 gi|262355510|gb|EEZ04601.1| ribosome recycling factor [Bacteroides sp. 2_1_22]
 gi|292636066|gb|EFF54554.1| ribosome recycling factor [Bacteroides ovatus SD CMC 3f]
 gi|292637509|gb|EFF55928.1| ribosome recycling factor [Bacteroides ovatus SD CC 2a]
 gi|294443560|gb|EFG12311.1| ribosome recycling factor [Bacteroides xylanisolvens SD CC 1b]
 gi|295084688|emb|CBK66211.1| ribosome recycling factor [Bacteroides xylanisolvens XB1A]
 gi|298270245|gb|EFI11831.1| ribosome recycling factor [Bacteroides sp. D22]
 gi|313696381|gb|EFS33216.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 186

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 111/178 (62%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M   I +L++ +  +R G+ S  +LD ++V++YGS VP++ VA +T  + R +
Sbjct: 8   LDNAQEKMDMAIMYLEEALAHIRAGKASARLLDGIRVDSYGSMVPISNVAAITTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  VIKPWDKSMFRVIEKAIIDSDLGIMPENNGEMIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRDG+D LKK+ K G A ED   + E  +QKI D  IK ID    EK KEIM
Sbjct: 128 VSVRNARRDGIDALKKAVKDGLA-EDEQKNAEAKLQKIHDKYIKQIDDMLAEKDKEIM 184


>gi|124025289|ref|YP_001014405.1| ribosome recycling factor [Prochlorococcus marinus str. NATL1A]
 gi|166230815|sp|A2C0Y0|RRF_PROM1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123960357|gb|ABM75140.1| Ribosome recycling factor [Prochlorococcus marinus str. NATL1A]
          Length = 182

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 111/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q +K+ M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A +T  + + + 
Sbjct: 4   QELKNTMSKSVEAAQRNFNTIRTGRANTSLLDRISVEYYGAETPLKSLATITTPDSQTIA 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S+LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDLGSLASIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRR+ +D +KKS K G  SED     +  IQK TD+ IK+I+    EK+ EI+
Sbjct: 124 ALRNIRREAIDRVKKSEKDGDLSEDQSRDEQEKIQKETDNFIKDIEKKLSEKEAEIL 180


>gi|239994190|ref|ZP_04714714.1| ribosome recycling factor [Alteromonas macleodii ATCC 27126]
          Length = 185

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 109/177 (61%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + ++RM  ++  LK     +RTGR  PS+LD + V  YG   PL QVANV   + R L +
Sbjct: 8   DAQERMEKSLVSLKGQFSKIRTGRAHPSLLDGIMVPYYGVDTPLKQVANVVAEDSRTLAL 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +V+DK  + +VE+ I +S+LGLNP+  G  +RIP+P  TEERR  L++V    AE  +++
Sbjct: 68  TVFDKSAIQAVEKAIMQSDLGLNPMSAGGSIRIPLPPLTEERRKDLIRVVRNEAEGGRVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD    +K   K  + SED   + E +IQ IT+  IK +DS   +K+KE+M 
Sbjct: 128 IRNIRRDANGDIKDLLKEKEISEDESRAAEENIQSITNDFIKKVDSMLADKEKELME 184


>gi|260890240|ref|ZP_05901503.1| ribosome recycling factor [Leptotrichia hofstadii F0254]
 gi|260859860|gb|EEX74360.1| ribosome recycling factor [Leptotrichia hofstadii F0254]
          Length = 185

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M  ++   K     +R GR S SMLD V VEAYGS  PLNQV  V+  E R+L
Sbjct: 6   LKEAEEKMQKSVENTKTKFSHVRAGRASVSMLDGVTVEAYGSATPLNQVGTVSAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++ ++E+ I ++NLG NP  +G+++R+ VPE TE+RR   VK+    AE+ K
Sbjct: 66  VIDPWDKSLIPAIEKTILQANLGFNPSNDGKIIRLVVPELTEDRRKEYVKMVKKEAEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+R++  + L+K  K  + +ED + S E  +QK TD  I  +D    +K+KE++
Sbjct: 126 VAIRNVRKEVNNKLRKLEKDSEITEDELKSSEEKVQKSTDKFIAQVDDALSKKEKELL 183


>gi|116629461|ref|YP_814633.1| ribosome recycling factor [Lactobacillus gasseri ATCC 33323]
 gi|238852611|ref|ZP_04643021.1| ribosome recycling factor [Lactobacillus gasseri 202-4]
 gi|311110891|ref|ZP_07712288.1| ribosome recycling factor [Lactobacillus gasseri MV-22]
 gi|122273601|sp|Q044C7|RRF_LACGA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116095043|gb|ABJ60195.1| ribosome recycling factor [Lactobacillus gasseri ATCC 33323]
 gi|238834757|gb|EEQ26984.1| ribosome recycling factor [Lactobacillus gasseri 202-4]
 gi|311066045|gb|EFQ46385.1| ribosome recycling factor [Lactobacillus gasseri MV-22]
          Length = 185

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 115/184 (62%), Gaps = 2/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+VI  +  KD M  +I+  +K++  +R G  + S+L+ +KV+ YG   PL Q+++V++ 
Sbjct: 3   NEVI--EKAKDNMKKSIAVFQKELGGIRAGVANASLLEGIKVDYYGVPTPLTQMSSVSIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+V+ +DK  +  +E  I  S+LG+ P  +G V+RI +P+ T ERR  + K     
Sbjct: 61  EARVLMVTPYDKSSLDDIEHAILASDLGITPANDGTVIRIVIPQLTGERRQEIAKQVGKL 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AEK KI+VRN+RRD MD LK+  K+G  +ED   SLE  +QK+TD   K ID   ++K +
Sbjct: 121 AEKGKIAVRNVRRDAMDTLKRQEKNGDITEDEQRSLEKQVQKVTDDATKEIDKLADQKSQ 180

Query: 182 EIMH 185
           EI  
Sbjct: 181 EITQ 184


>gi|313677103|ref|YP_004055099.1| ribosome recycling factor [Marivirga tractuosa DSM 4126]
 gi|312943801|gb|ADR22991.1| ribosome recycling factor [Marivirga tractuosa DSM 4126]
          Length = 186

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 110/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+ M   I   K ++  +R G+ SP+MLD + V+ YG+  P+NQVA+++  + R +
Sbjct: 8   LDEAKELMEKAIQHTKSNLQKIRAGKASPAMLDGLMVDYYGNDTPINQVASISTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+K ++  +ER I  S+LG  P  +G+++RI +P  TEERR++L K A   AE  K
Sbjct: 68  IIKPWEKNIIGEIERAIINSDLGFTPQNDGEIVRINIPPLTEERRISLTKQAKNEAEDGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IS+RN R+D  D LK+ +K G  SED V   E+ +Q +T+   K ID   E K+KEIM
Sbjct: 128 ISIRNARKDANDQLKQLQKEG-ISEDDVKRGEDKVQSLTNDFTKKIDDILEHKEKEIM 184


>gi|256851266|ref|ZP_05556655.1| ribosome recycling factor [Lactobacillus jensenii 27-2-CHN]
 gi|260660690|ref|ZP_05861605.1| ribosome recycling factor [Lactobacillus jensenii 115-3-CHN]
 gi|282934734|ref|ZP_06339977.1| ribosome recycling factor [Lactobacillus jensenii 208-1]
 gi|297206133|ref|ZP_06923528.1| ribosome recycling factor [Lactobacillus jensenii JV-V16]
 gi|256616328|gb|EEU21516.1| ribosome recycling factor [Lactobacillus jensenii 27-2-CHN]
 gi|260548412|gb|EEX24387.1| ribosome recycling factor [Lactobacillus jensenii 115-3-CHN]
 gi|281301309|gb|EFA93610.1| ribosome recycling factor [Lactobacillus jensenii 208-1]
 gi|297149259|gb|EFH29557.1| ribosome recycling factor [Lactobacillus jensenii JV-V16]
          Length = 185

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 113/173 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M  +I+  +K++  +R G  + S+L+ VKV+ YG   PL Q+++VT+ E R+L+V+ 
Sbjct: 10  KENMDKSIAVYQKELGNIRAGVANASLLEGVKVDYYGVPTPLTQMSSVTIPEARVLLVTP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  + ++E  +  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++KI++R
Sbjct: 70  YDKSSLDNIEHALLASDLGLTPANDGNVIRLVIPQLTGERREEIAKQVGKQAEQAKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           N+RR+ MD LKK  K+G  +ED    LE D+QK+TD   K +D   +EK+KEI
Sbjct: 130 NVRREAMDSLKKQEKNGDITEDEQKRLEKDVQKVTDDATKRVDQLADEKRKEI 182


>gi|86140791|ref|ZP_01059350.1| ribosome releasing factor [Leeuwenhoekiella blandensis MED217]
 gi|85832733|gb|EAQ51182.1| ribosome releasing factor [Leeuwenhoekiella blandensis MED217]
          Length = 187

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 108/178 (60%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ M + ++ LKK    +R G+ SPSML  V V+ YGS  PL QVANV   + R +
Sbjct: 9   LDGTEEAMQNAVNHLKKQFANIRAGKASPSMLGSVMVDYYGSQTPLAQVANVNTPDGRTI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K M+  +E+ I  +NLG NP+  G+ + I VP  TEERR  LVK A A AE +K
Sbjct: 69  SIQPWEKSMIQEIEKAIMNANLGFNPMNNGESVIINVPPLTEERRRDLVKQAKAEAEDAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VRN R++  + +KK  K G A ED+ ++ E D+Q +TD  IK ID     K+KEI+
Sbjct: 129 VGVRNDRKNANNDIKKLEKDGLA-EDICSNAEVDVQDLTDKYIKRIDELLAVKEKEIL 185


>gi|153864070|ref|ZP_01997081.1| Ribosome recycling factor [Beggiatoa sp. SS]
 gi|152146433|gb|EDN72917.1| Ribosome recycling factor [Beggiatoa sp. SS]
          Length = 188

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 117/177 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK D++ +R+GR   S+L+ + V  YG+  P+NQ+AN++V++PR L 
Sbjct: 10  KDAEERMDKSVKALKDDLIKIRSGRAHTSLLEHITVPYYGTDTPINQIANISVIDPRTLG 69

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ ++K +++ VE+ I +S+LGLNP   G +LR+P+P  TEERR  LVKV    AEK+++
Sbjct: 70  VAPYEKNILSIVEKAIRDSDLGLNPTNVGNLLRVPLPPMTEERRRDLVKVVRHDAEKARV 129

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD    LK+       S+D     E  IQK+T+  I  +DS  +EK+ ++M
Sbjct: 130 AIRNIRRDANHDLKELMNDKDISKDEEHHGEEMIQKLTNKLIAQVDSVLQEKEAKLM 186


>gi|78188304|ref|YP_378642.1| ribosome recycling factor [Chlorobium chlorochromatii CaD3]
 gi|123580409|sp|Q3ATS6|RRF_CHLCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78170503|gb|ABB27599.1| ribosome recycling factor [Chlorobium chlorochromatii CaD3]
          Length = 186

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 108/177 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I+ +M   +   + ++ T+RTG+ + ++LD VKVEAYG  +PL QV NV+V +   L+
Sbjct: 8   QKIEPKMKKCLEAFQHEITTIRTGKATTTLLDRVKVEAYGQQMPLKQVGNVSVQDAHTLM 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV++ E+ I ++NLGLNP  EGQ +R+ +P  TEERR   VK+   + E SK+
Sbjct: 68  VQVWDKSMVSATEKAIRDANLGLNPAAEGQSIRVSIPPLTEERRKEFVKLTKKFGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RN+RRD +  ++K  K+   SED     + D   +     K +      K+KEIM
Sbjct: 128 SLRNLRRDMIQDIEKLEKAKAVSEDEKNKGKKDADDLLHKYEKLLMDMITAKEKEIM 184


>gi|72383689|ref|YP_293044.1| ribosome recycling factor [Prochlorococcus marinus str. NATL2A]
 gi|123620292|sp|Q46GQ5|RRF_PROMT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|72003539|gb|AAZ59341.1| ribosome recycling factor [Prochlorococcus marinus str. NATL2A]
          Length = 182

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 110/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q +K  M  +I   +++  T+RTGR + S+LD + VE YG+  PL  +A +T  + + + 
Sbjct: 4   QELKTTMSKSIEAAQRNFNTIRTGRANTSLLDRISVEYYGAETPLKSLATITTPDSQTIA 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S+LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDLGSLASIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRR+ +D +KKS K G  SED     +  IQK TD+ IK+I+    EK+ EI+
Sbjct: 124 ALRNIRREAIDRVKKSEKDGDLSEDQSRDEQETIQKETDNFIKDIEKKLSEKEAEIL 180


>gi|261416241|ref|YP_003249924.1| ribosome recycling factor [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372697|gb|ACX75442.1| ribosome recycling factor [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325448|gb|ADL24649.1| ribosome recycling factor [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 177

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 115/173 (66%), Gaps = 3/173 (1%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   I   +++   +R G+ SP++L+ V+++ YG+  P++QVA ++V EPRML+V+ W
Sbjct: 6   EKMDKAIEATEREFSKIRAGQASPAILNGVRIDYYGTPTPISQVAKISVPEPRMLLVTPW 65

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K++V ++++ I  +N+GL P+ +G  +R+ +P  T ERR  L K+A  +AE  ++++RN
Sbjct: 66  EKQLVDTIDKAILAANIGLTPMKDGNCIRVTLPILTTERRKELAKIARKHAEDGRVAIRN 125

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRD  D LKK++   + SED V   +++IQK TD  I  ID    EK+ +I+
Sbjct: 126 IRRDANDALKKNK---EISEDEVKKQQDEIQKATDKAIAEIDRLLAEKEADIL 175


>gi|218133702|ref|ZP_03462506.1| hypothetical protein BACPEC_01571 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991077|gb|EEC57083.1| hypothetical protein BACPEC_01571 [Bacteroides pectinophilus ATCC
           43243]
          Length = 183

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 111/179 (62%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D+   +D+M  ++  L +D  T+R GR +P +LD ++V+ Y +  PL QVAN++V E R+
Sbjct: 3   DIAIYEDKMKKSVEALLEDYKTIRAGRANPHILDKIRVDYYNTPTPLQQVANISVPEARI 62

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + +  WD  ++  +E+ I  S+LGL P  +G+V+R+  PE TE+RR  L K      E +
Sbjct: 63  IQIQPWDASLIKEIEKAIIVSDLGLTPNNDGKVIRLVFPELTEDRRKELSKDVKKKGENA 122

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           K+++RN+RRD  D  KK  K+ + SED +   E+ IQKITD  I  +D   ++K KE+M
Sbjct: 123 KVAIRNVRRDANDVFKKQNKANEISEDELKDAEDSIQKITDKYITEVDKCVDDKIKEVM 181


>gi|154506087|ref|ZP_02042825.1| hypothetical protein RUMGNA_03629 [Ruminococcus gnavus ATCC 29149]
 gi|153793586|gb|EDN76006.1| hypothetical protein RUMGNA_03629 [Ruminococcus gnavus ATCC 29149]
          Length = 183

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 108/173 (62%), Gaps = 1/173 (0%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           D+M  TI+ L  ++  +R GR +P +LD + V+ YG   P+ Q AN++V E RM+ +  W
Sbjct: 10  DKMTKTINNLGSELAAIRAGRANPHVLDKLTVDYYGVPTPIQQAANISVPEARMIQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K M+  +E+ I  S++G+NP  +G V+R+  PE TEERR  LVK      E +K+++RN
Sbjct: 70  EKSMLKEIEKAILMSDIGINPTNDGTVVRLMFPELTEERRKELVKDVKKKGEAAKVAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IRRDG D  KK  K  + SED +  LE+ +QK+TD  I  +D   E K KE++
Sbjct: 130 IRRDGNDAFKK-LKGTEISEDGIKDLEDSLQKLTDKYIAEVDKAVEAKSKEVL 181


>gi|152995304|ref|YP_001340139.1| ribosome recycling factor [Marinomonas sp. MWYL1]
 gi|189044060|sp|A6VUS5|RRF_MARMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|150836228|gb|ABR70204.1| ribosome recycling factor [Marinomonas sp. MWYL1]
          Length = 185

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +DRM   ++ ++     +RTGR  PS+LD VKV  YGS  PL+QVAN+TV + R L
Sbjct: 6   LKDAEDRMSKAVASVESAFKKIRTGRAHPSILDSVKVNYYGSETPLSQVANITVEDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            VS W+  +V  +E+ I +S+LGLNP   G ++RIP+P  TEE R    K A   AE  +
Sbjct: 66  GVSPWENNLVPEIEKAIMKSDLGLNPATNGNLIRIPMPALTEETRKNYFKQAKNEAENGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD    LK   K  + SED     ++ +QK+TD  +  I+     K+K++M  
Sbjct: 126 IAIRNIRRDANGSLKDLVKEKEISEDDDRRGQDQVQKVTDKYVAQIEERLAAKEKDLMEI 185


>gi|118594910|ref|ZP_01552257.1| ribosome releasing factor [Methylophilales bacterium HTCC2181]
 gi|118440688|gb|EAV47315.1| ribosome releasing factor [Methylophilales bacterium HTCC2181]
          Length = 184

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N +++M ++I  LK ++  +RTGR    +LD + V+ YGS   LNQVA VT+ +   + 
Sbjct: 6   KNTRNKMQNSIDALKGNLSKIRTGRAHTGVLDHINVDYYGSQTALNQVAGVTLGDATTIN 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  ++K M+A +E+ I ES+LGLNP   G ++R+P+P  TEERR  L+KV  +  E +KI
Sbjct: 66  IQPYEKTMIAVIEKAIRESDLGLNPATSGDLIRVPMPPLTEERRKDLIKVVKSEGENTKI 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED     + ++QK+TD  I ++D   E K+K+++
Sbjct: 126 AIRNVRRDANEALKKLTKEKEISEDDERRAQEEVQKMTDQFIVSVDQTIETKEKDLL 182


>gi|153808675|ref|ZP_01961343.1| hypothetical protein BACCAC_02974 [Bacteroides caccae ATCC 43185]
 gi|149128501|gb|EDM19719.1| hypothetical protein BACCAC_02974 [Bacteroides caccae ATCC 43185]
          Length = 186

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 110/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M   I +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   LDNAQEKMDMAIMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  TIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRDG+D LKK+ K G A ED   + E  +QKI D  IK ID    EK KEIM
Sbjct: 128 VSVRNARRDGIDALKKAVKDGLA-EDEQKNAEAKLQKIHDKYIKQIDDMLAEKDKEIM 184


>gi|255693713|ref|ZP_05417388.1| ribosome recycling factor [Bacteroides finegoldii DSM 17565]
 gi|260620530|gb|EEX43401.1| ribosome recycling factor [Bacteroides finegoldii DSM 17565]
          Length = 186

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 110/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   LDNAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+V+RI +P  TEERR  L K      E +K
Sbjct: 68  TIKPWDKSMFRVIEKAIIDSDLGIMPENNGEVIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRDG+D LKK+ K G A ED   + E  +QKI D  IK ID    EK KEIM
Sbjct: 128 VSVRNARRDGIDALKKAVKDGLA-EDEQKNAEAKLQKIHDKYIKQIDDMLAEKDKEIM 184


>gi|94985150|ref|YP_604514.1| ribosome recycling factor [Deinococcus geothermalis DSM 11300]
 gi|166230783|sp|Q1IZI9|RRF_DEIGD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|94555431|gb|ABF45345.1| ribosome recycling factor [Deinococcus geothermalis DSM 11300]
          Length = 183

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 116/176 (65%), Gaps = 3/176 (1%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + ++RMG  I  L+ ++  LRTGR +P +L  V VE YGS +P++QVA++T  + R LV+
Sbjct: 10  DARERMGKAIEALENNLSVLRTGRANPGILKKVMVEYYGSSMPIDQVASITTPDARTLVI 69

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + WD+  +  +E+ I +S+LGLNP  +G  + I +P  TEERR  LVK A  YAE+++++
Sbjct: 70  TPWDRGALNPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKNYAEEARVA 129

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +R+IR+  +D +KK    G   +D +   E ++QKITD  IK ++  F +K++EI+
Sbjct: 130 IRSIRKHALDEVKKVEGVG---DDEIKRAEAEVQKITDEYIKRVEDTFHKKEQEIL 182


>gi|332519130|ref|ZP_08395597.1| ribosome recycling factor [Lacinutrix algicola 5H-3-7-4]
 gi|332044978|gb|EGI81171.1| ribosome recycling factor [Lacinutrix algicola 5H-3-7-4]
          Length = 185

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 105/174 (60%), Gaps = 3/174 (1%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M   I  LKK  + +R G+ SP+ML  V V+ YGS  PL+QVANV   + R + +  
Sbjct: 13  KESMDAAIEHLKKQFLNIRAGKASPAMLGSVVVDYYGSKTPLSQVANVNTPDGRTITIQP 72

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K M+  +E+ I  +NLG NP+  G+ L I VP  TEERRL L K A A AE +K+ VR
Sbjct: 73  WEKGMIQEIEKAIMIANLGFNPMNNGESLIINVPPLTEERRLQLGKQAKAEAEDAKVGVR 132

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R+D  + +K   K   ASED+  + E DIQ++T+ ++K ID     K  EIM
Sbjct: 133 NARKDANNDIK---KVDDASEDLQKNAEADIQELTNKSVKKIDELLANKDAEIM 183


>gi|71066089|ref|YP_264816.1| ribosome recycling factor [Psychrobacter arcticus 273-4]
 gi|123648272|sp|Q4FRH6|RRF_PSYA2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|71039074|gb|AAZ19382.1| ribosome recycling factor [Psychrobacter arcticus 273-4]
          Length = 184

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 112/177 (63%), Gaps = 1/177 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  T+  L+     +RTGR  P ML  V V  YGS  PLNQVA+V V + R L+
Sbjct: 7   QDGEARMQKTLEALESTFSKVRTGRAHPGMLSGVMVSYYGSDTPLNQVASVNVEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +D+ MV ++++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE S++
Sbjct: 67  VQPFDRTMVQAIDKAIREADLGLNPMT-ADVIRVPMPALTEETRRDMQKLARGEAENSRV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRD M+ +K+  K  + SED      +DIQKITD  I+ IDS   +K+ ++M
Sbjct: 126 SIRNIRRDMMNDIKELAKEKEISEDDEHRASDDIQKITDKYIETIDSRLSKKESDLM 182


>gi|167752630|ref|ZP_02424757.1| hypothetical protein ALIPUT_00885 [Alistipes putredinis DSM 17216]
 gi|167659699|gb|EDS03829.1| hypothetical protein ALIPUT_00885 [Alistipes putredinis DSM 17216]
          Length = 185

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 114/178 (64%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    DRM  TI  L+++++ +R G+ SP++L+ V V+ YGS  P++ VA+VTV + + +
Sbjct: 7   LSEASDRMQKTIEHLEEELLNIRAGKASPTVLNGVFVDYYGSQTPISGVASVTVPDAKTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK ++ ++E+ I +SN+GL P   G+ +R+ +P  TEERR  LVK     AE ++
Sbjct: 67  LIQPWDKNLIRAIEKAIIDSNIGLTPSNNGEQIRLSIPPLTEERRKELVKQVRQEAETAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IS+RN RRD ++  KK++K G  SED     E   QK+ D   K++D+  + K+KEIM
Sbjct: 127 ISLRNARRDAVEAFKKAQKEG-MSEDEAKDGETQAQKLLDKFTKSLDAILDNKEKEIM 183


>gi|114321011|ref|YP_742694.1| ribosome recycling factor [Alkalilimnicola ehrlichii MLHE-1]
 gi|122311395|sp|Q0A7I3|RRF_ALHEH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114227405|gb|ABI57204.1| ribosome recycling factor [Alkalilimnicola ehrlichii MLHE-1]
          Length = 185

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 107/174 (61%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  +I   + ++  +RTGR   ++LD + V  YG+ VPLNQ A+V V + R L V  ++
Sbjct: 12  RMKKSIEAFRAELRKIRTGRAHTNLLDHISVTYYGTEVPLNQAASVKVEDARTLSVIPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K MV  VE+ I  S+LGL P   G V+RIP+P  TE+RR  LVKV  + AE++++++RNI
Sbjct: 72  KSMVPEVEKAIQSSDLGLTPTTAGTVIRIPMPPLTEDRRKELVKVVRSEAEQARVAIRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD    LK+  K  + SED     E+ IQK+TD     +D   +EK+KE+M  
Sbjct: 132 RRDANSDLKELLKEKEISEDEERGGEDAIQKLTDKYTGEVDRILQEKEKELMEI 185


>gi|329119073|ref|ZP_08247765.1| ribosome recycling factor [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464812|gb|EGF11105.1| ribosome recycling factor [Neisseria bacilliformis ATCC BAA-1200]
          Length = 185

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 114/180 (63%), Gaps = 1/180 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QV +VT+L+ R
Sbjct: 4   DIQKTAESKMQRSLEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVGSVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M A +E+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV  A AE+
Sbjct: 64  TIGVKPFESGMAAKIEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRAEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD      D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKKLLKDKEVSEDEARRGEEAVQKLTDKYTAEADKILAAKEEDLM 183


>gi|34497654|ref|NP_901869.1| ribosome recycling factor [Chromobacterium violaceum ATCC 12472]
 gi|39932056|sp|Q7NVZ1|RRF_CHRVO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|34103510|gb|AAQ59872.1| ribosome recycling factor [Chromobacterium violaceum ATCC 12472]
          Length = 185

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 107/172 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  T+   K D+  +RTGR    +LD V V+ YGS VP+NQVANVT+++ R + V  W+
Sbjct: 12  KMQKTLEAFKNDLAKVRTGRAHTGILDHVMVDYYGSDVPVNQVANVTLIDARTIGVQPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+A +E+ I +S+LGLNP   G+++R+P+P  TEERR  L+KV    AE ++++VRNI
Sbjct: 72  KPMLAKIEKAIRDSDLGLNPASMGEIIRVPMPMLTEERRKDLIKVVRGEAEGARVAVRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD     K   K    +ED     +++IQK+TD     ID     K+ +++
Sbjct: 132 RRDSNTEFKNLLKDKAITEDDERRGQDEIQKLTDKYTAEIDKMLATKEADLL 183


>gi|56707469|ref|YP_169365.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669940|ref|YP_666497.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370837|ref|ZP_04986842.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           FSC033]
 gi|60390229|sp|Q5NHX7|RRF_FRATT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122971071|sp|Q14JC9|RRF_FRAT1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56603961|emb|CAG44949.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320273|emb|CAL08332.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569080|gb|EDN34734.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           FSC033]
 gi|282158613|gb|ADA78004.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 185

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 109/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  ++  L  D+  +RTGR  P +L  V ++ YG   P+ Q AN+TVL+ R L
Sbjct: 6   LKDAENRMKKSLEVLADDLAKIRTGRAQPDLLAHVTIDYYGVETPITQAANITVLDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K + + +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+  +  E  +
Sbjct: 66  GITPWEKGLSSKIEKAILTSDLGLNPTNLGDSLRVPMPALNEERRKELVKLVKSETEAGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD    +K+  K  + +ED     E+DIQKITD  I   D+   +K++++M
Sbjct: 126 VSIRNIRRDANGDIKELLKEKEITEDQAKKAEDDIQKITDKMIAQADALAAKKEQDLM 183


>gi|77164329|ref|YP_342854.1| ribosome recycling factor [Nitrosococcus oceani ATCC 19707]
 gi|254434229|ref|ZP_05047737.1| ribosome recycling factor [Nitrosococcus oceani AFC27]
 gi|123594762|sp|Q3JCX2|RRF_NITOC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|76882643|gb|ABA57324.1| ribosome recycling factor [Nitrosococcus oceani ATCC 19707]
 gi|207090562|gb|EDZ67833.1| ribosome recycling factor [Nitrosococcus oceani AFC27]
          Length = 187

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 109/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  +++ LK+    LR  R   S+LD + V  YG++VPLNQVANV+V + R L V+ W+
Sbjct: 14  RMDKSLNALKQAFARLRANRAHTSLLDHITVSYYGNNVPLNQVANVSVEDARTLTVTPWE 73

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           ++MV  +E+ I  S LGLNP+  G V+R+P+P  TEERR  +V++    AE +++++RNI
Sbjct: 74  RQMVPVIEKAIMTSELGLNPVTAGTVIRVPLPVLTEERRREMVRLVRQEAEAARVAMRNI 133

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD    +K+  K  + SED     E  IQKITD+ I  +D     K++++M
Sbjct: 134 RRDSNHTIKELIKEKEISEDDQRRAEEAIQKITDNHITQVDELLAVKEQDLM 185


>gi|307243333|ref|ZP_07525497.1| ribosome recycling factor [Peptostreptococcus stomatis DSM 17678]
 gi|306493280|gb|EFM65269.1| ribosome recycling factor [Peptostreptococcus stomatis DSM 17678]
          Length = 185

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 112/177 (63%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
            ++++M  TI  LK +  T+R GR + SMLD V+V+ YG+  P+NQ+A + V E R+L +
Sbjct: 8   QLEEQMEKTIEALKFEFGTIRAGRANASMLDKVRVDYYGTPTPVNQMAAIAVSEGRILTI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + WDK  + ++E+ I ES++G+ P  +G V+R+ VP  TEERR  L K A   +E  K+ 
Sbjct: 68  TPWDKSSIHTIEKAISESDVGIAPANDGSVIRLVVPPLTEERRKELAKKASKASESFKVR 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RN RRD  D +KK  K+G+ +ED      +++QK+TD  IK I+     K+K+IM 
Sbjct: 128 IRNDRRDANDKIKKMEKAGELAEDDAKKAIDEVQKMTDKYIKTIEELTANKEKDIME 184


>gi|262039426|ref|ZP_06012733.1| ribosome recycling factor [Leptotrichia goodfellowii F0264]
 gi|261746562|gb|EEY34094.1| ribosome recycling factor [Leptotrichia goodfellowii F0264]
          Length = 185

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 111/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +DRM   +   K     +R GR S SMLD V VEAYG   PLNQV  V+  E R+L
Sbjct: 6   LKETEDRMHKALENTKDKFSHVRAGRASVSMLDGVSVEAYGVMTPLNQVGTVSAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK ++ ++E+ I ++NLG NP  +G+++R+ VPE TE+RR   VK+    AE+ K
Sbjct: 66  TIDPWDKSIIPAIEKVILQANLGFNPSNDGKIIRLVVPELTEDRRKEYVKLVKKEAEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+R+D  + ++K  K  + +ED + S E  +QK+TD  I  ID    +K+KE++
Sbjct: 126 VAIRNVRKDVNNKIRKLEKDSEITEDELKSGEEKVQKMTDKFIAEIDDVLAKKEKELL 183


>gi|295136354|ref|YP_003587030.1| ribosome releasing factor [Zunongwangia profunda SM-A87]
 gi|294984369|gb|ADF54834.1| ribosome releasing factor [Zunongwangia profunda SM-A87]
          Length = 184

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 4/171 (2%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M + IS L K ++ +R G+ SPSML  V VE YGS  PLNQVANV   + R + V  ++K
Sbjct: 16  MQNAISHLNKQLLNIRAGKASPSMLGSVMVEYYGSLTPLNQVANVNAPDARTISVQPFEK 75

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++E+GI ++NLG NP+  G+ + I VP  TEERR  LVK A + AE +K+ VRN R
Sbjct: 76  GSIPNIEKGILQANLGFNPMNNGESVIISVPPLTEERRKQLVKQAKSEAEDAKVGVRNDR 135

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +   + LKK     + SED+  + E DIQ++TD  I  ID   E K+KEIM
Sbjct: 136 KTANNELKKI----EVSEDLQKNAEADIQELTDKYIAKIDRILEAKEKEIM 182


>gi|62263467|gb|AAX78163.1| unknown protein [synthetic construct]
          Length = 220

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 109/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  ++  L  D+  +RTGR  P +L  V ++ YG   P+ Q AN+TVL+ R L
Sbjct: 32  LKDAENRMKKSLEVLADDLAKIRTGRAQPDLLAHVTIDYYGVETPITQAANITVLDARTL 91

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K + + +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+  +  E  +
Sbjct: 92  GITPWEKGLSSKIEKAILTSDLGLNPTNLGDSLRVPMPALNEERRKELVKLVKSETEAGR 151

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD    +K+  K  + +ED     E+DIQKITD  I   D+   +K++++M
Sbjct: 152 VSIRNIRRDANGDIKELLKEKEITEDQAKKAEDDIQKITDKMIAQADALAAKKEQDLM 209


>gi|322390000|ref|ZP_08063539.1| ribosome recycling factor [Streptococcus parasanguinis ATCC 903]
 gi|321143313|gb|EFX38752.1| ribosome recycling factor [Streptococcus parasanguinis ATCC 903]
          Length = 185

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 112/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  T+R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLGREFGTIRAGRANASLLDRIFVEYYGVETPLNQLASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E  I+  +LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LITPFDKSSLKDIEHSINAFDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD MD  KK  K+ + +ED +  LE +IQK+TD  +K++D     K+KE+M
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKGLEKEIQKVTDDAVKHVDEMTAHKEKELM 183


>gi|29654680|ref|NP_820372.1| ribosome recycling factor [Coxiella burnetii RSA 493]
 gi|161830368|ref|YP_001597227.1| ribosome recycling factor [Coxiella burnetii RSA 331]
 gi|190569464|ref|ZP_03022332.1| ribosome recycling factor [Bacillus anthracis Tsiankovskii-I]
 gi|34924915|sp|Q83BV4|RRF_COXBU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044053|sp|A9N8Q7|RRF_COXBR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29541948|gb|AAO90886.1| ribosome recycling factor [Coxiella burnetii RSA 493]
 gi|161762235|gb|ABX77877.1| ribosome recycling factor [Coxiella burnetii RSA 331]
 gi|190559424|gb|EDV13441.1| ribosome recycling factor [Bacillus anthracis Tsiankovskii-I]
          Length = 185

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 109/174 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM  ++  LK ++  LRT R  PS+L+ +KV+ Y    PL+QVA++ +  PR L ++ 
Sbjct: 10  KSRMEKSLGSLKTELAKLRTCRAHPSLLEHIKVDYYNVETPLSQVASIAIENPRTLSITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K MV  +E+ I +++LGLNP   G V+R+P+P  TEERR  L +V    AE +++++R
Sbjct: 70  WEKNMVGPIEKAIQKADLGLNPATVGMVIRVPLPPLTEERRKELARVVREEAEHARVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRR+  + LK+  K  + SED     +  IQK+TD+ I  +D    +K+ ++M
Sbjct: 130 NIRREANNDLKELMKEKEISEDEERRAQTAIQKLTDAQIAEVDKMASQKEADLM 183


>gi|237743351|ref|ZP_04573832.1| ribosome Recycling Factor [Fusobacterium sp. 7_1]
 gi|256028469|ref|ZP_05442303.1| ribosome recycling factor (RRF) [Fusobacterium sp. D11]
 gi|260495029|ref|ZP_05815158.1| ribosome recycling factor [Fusobacterium sp. 3_1_33]
 gi|289766390|ref|ZP_06525768.1| ribosome Recycling Factor [Fusobacterium sp. D11]
 gi|229433130|gb|EEO43342.1| ribosome Recycling Factor [Fusobacterium sp. 7_1]
 gi|260197472|gb|EEW94990.1| ribosome recycling factor [Fusobacterium sp. 3_1_33]
 gi|289717945|gb|EFD81957.1| ribosome Recycling Factor [Fusobacterium sp. D11]
          Length = 190

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD VKV+ YGS VPLNQ+  V+  E R+L
Sbjct: 9   VKECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVDNYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ +  +NLG+ P  +G+V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 69  VIDPWDKSLISKIEKALLAANLGMTPNNDGRVIRLVLPELTAERRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKK--SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  + LKK    K    SED +   E  +Q +TD  +K ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNRLKKLEKDKENPISEDELKKEETRVQTLTDKYVKEIDELLAKKEKEI 187


>gi|87118624|ref|ZP_01074523.1| ribosome recycling factor [Marinomonas sp. MED121]
 gi|86166258|gb|EAQ67524.1| ribosome recycling factor [Marinomonas sp. MED121]
          Length = 185

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RMG +I+ ++     +RTGR  PS+LD V+++ YGS  PL+QVAN+TV + R L
Sbjct: 6   LLDAEERMGKSITAVETAFKKIRTGRAHPSILDSVRIDYYGSDTPLSQVANITVEDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S W+K +V  +E+ I +S+LGLNP   G ++RIP+P  TEE R    K A A AE ++
Sbjct: 66  GISPWEKNLVPEIEKAIMKSDLGLNPSTTGGLIRIPMPALTEETRKNYFKQAKAEAESAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD     K   K  + SED     ++ +QK+TD  +  ++    +K+K++M
Sbjct: 126 VSIRNIRRDANAGFKSLVKEKEISEDDDRRAQDLVQKLTDKYVAEVEDRLAKKEKDLM 183


>gi|294671220|ref|ZP_06736073.1| hypothetical protein NEIELOOT_02930 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307048|gb|EFE48291.1| hypothetical protein NEIELOOT_02930 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 185

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QV +VT+L+ R
Sbjct: 4   DIQKTAESKMLRSLEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVGSVTLLDAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++  M   +E+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+
Sbjct: 64  TIGVKPFESNMAGKIEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRD  DH+K+  K  + SED     E  +QK+TD+ I  +D     K++++M
Sbjct: 124 GRVSIRNVRRDANDHIKRLLKDKEVSEDEARRGEEAVQKLTDNNIAEVDKILAAKEEDLM 183


>gi|300728352|ref|ZP_07061716.1| ribosome recycling factor [Prevotella bryantii B14]
 gi|299774388|gb|EFI71016.1| ribosome recycling factor [Prevotella bryantii B14]
          Length = 186

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 116/178 (65%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + +M    +FL +++  +R GR + ++LD V+VE+YG  VPLNQVANV V + R +
Sbjct: 8   LKDAESKMQKASNFLAEELARVRAGRANVAILDGVRVESYGQMVPLNQVANVQVSDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +  +E+GI +S +G+ P   G+++ + +P+ TEERR  LVK  +   E++K
Sbjct: 68  TIRPWDRKQIRDIEKGIIDSEVGVTPENNGEMVILRLPQPTEERRKELVKQCNKIGEQTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + +RNIR D  D LKK+ K G  SED+    E D+QK  D  IK++D+   +K+KEIM
Sbjct: 128 VQIRNIRADIKDKLKKAVKDG-LSEDLEKDAETDLQKTHDKFIKDVDAILADKQKEIM 184


>gi|295094737|emb|CBK83828.1| ribosome recycling factor [Coprococcus sp. ART55/1]
          Length = 181

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 111/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  ++  L+ +  T+R GR +P++L+ +KVE YG   P+ Q+AN+TV E R L
Sbjct: 2   LTQYEEKMQKSVENLEAEYATIRAGRANPNILNKIKVEYYGVPTPMQQLANITVPEARTL 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ W+  +V  +E+ I  S+LG+ P  +G+ + +  PE TE+RR  LVK      E +K
Sbjct: 62  VIAPWEPSLVKEIEKAIMNSDLGITPNNDGRNIILNFPELTEDRRKELVKDIKKKGEGAK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD  D +KK  K+G  SED +   E+ IQK+TD  +  ID   E K KEIM
Sbjct: 122 VAIRNIRRDANDAIKKMEKNGDISEDELKDNEDKIQKLTDKYVGQIDKAVESKSKEIM 179


>gi|183221973|ref|YP_001839969.1| ribosome recycling factor [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912041|ref|YP_001963596.1| ribosome recycling factor [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|190360250|sp|B0SDN4|RRF_LEPBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238687812|sp|B0SM63|RRF_LEPBP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167776717|gb|ABZ95018.1| Ribosome recycling factor [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780395|gb|ABZ98693.1| Ribosome recycling factor (Ribosome releasing factor; RRF)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 183

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++++ +M  T+  LKKD  T+RTG+ +P M++ V+V+ YG+  PLNQ+  +   EPR++
Sbjct: 6   IKSMQSKMDKTVDALKKDFGTIRTGKANPMMVEDVRVDYYGTLTPLNQLGKIACPEPRVI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ ++K M+  +E+ I  ++LGL P  +G  +RI +PE T ERR  L KV    AE+ K
Sbjct: 66  LITPFEKGMLKDIEKAIFAASLGLTPNNDGSSIRINIPELTGERRKELAKVVKQKAEEKK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD  D LKK +   + S+D V   ++ IQKITDS I  +    +EK+KEI
Sbjct: 126 VAIRNIRRDANDELKKHQ--SEMSQDEVKGHQDKIQKITDSYIAKLGDLEKEKEKEI 180


>gi|110596934|ref|ZP_01385224.1| ribosome recycling factor [Chlorobium ferrooxidans DSM 13031]
 gi|110341621|gb|EAT60081.1| ribosome recycling factor [Chlorobium ferrooxidans DSM 13031]
          Length = 186

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 109/177 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  + +M  TI   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV NV VL+   L+
Sbjct: 8   QKTEQKMKKTIEAFQHEIASIRTGKATTALLDRVKVEAYGQQMPLKQVGNVGVLDVHTLM 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV++ E+ I ++NLGLNP  +GQ +R+ +P  TEERR   VK+   + E SKI
Sbjct: 68  VQVWDKSMVSATEKAIRDANLGLNPSADGQNIRVSIPPLTEERRKEFVKLTRKFGEDSKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RN+RRD +  ++K  K    SED     + +  ++   + K +      K+KEIM
Sbjct: 128 SLRNLRRDMIHEIEKLEKDKAISEDDKNRGKKEADELLHKSEKQLTEIMSAKEKEIM 184


>gi|328675398|gb|AEB28073.1| Ribosome recycling factor [Francisella cf. novicida 3523]
          Length = 185

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  ++  L  D+  +RTGR  P +L  V ++ YG   P++Q AN+TVL+ R L
Sbjct: 6   LKDAENRMKKSLEVLADDLAKIRTGRAHPDLLAHVTIDYYGVETPISQAANITVLDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K + + +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+  +  E  +
Sbjct: 66  GITPWEKGLSSKIEKAILTSDLGLNPTNLGDSLRVPMPALNEERRKELVKLVKSETEAGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD    +K+  K  + +ED     E+DIQKITD  I   D+   +K++++M
Sbjct: 126 VSIRNIRRDANGDIKELLKEKEITEDQAKKAEDDIQKITDKMIAQADALAAKKEQDLM 183


>gi|325295600|ref|YP_004282114.1| ribosome-recycling factor [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325066048|gb|ADY74055.1| Ribosome-recycling factor [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 185

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  +RM   +  LK D   LRTGR S  +++ +KV+ YGS + + Q+A + V EP  +
Sbjct: 6   LKDADNRMKKAVEVLKTDFAGLRTGRASTVLVEDIKVDYYGSIMTIKQIAQIAVPEPTQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD  ++ ++E+ I ES+LG+ P  +G ++RI +P  TEERR  LVK A   AE++K
Sbjct: 66  TIQPWDVSVIPNIEKAIRESDLGVQPQRDGNIIRINLPPLTEERRKELVKKAGKMAEQAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIR + M  L K +K G  SED +   ++++QKITD   K ID   ++K++EI+
Sbjct: 126 IAIRNIRHEIMKELDKLKKEGGYSEDDIKRAKDELQKITDKHTKKIDELLQKKEEEIL 183


>gi|288924743|ref|ZP_06418680.1| ribosome recycling factor [Prevotella buccae D17]
 gi|315607757|ref|ZP_07882750.1| ribosome recycling factor [Prevotella buccae ATCC 33574]
 gi|288338530|gb|EFC76879.1| ribosome recycling factor [Prevotella buccae D17]
 gi|315250226|gb|EFU30222.1| ribosome recycling factor [Prevotella buccae ATCC 33574]
          Length = 186

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 113/178 (63%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM     +L + +  +R GR + ++LD +KVE+YG  VPLNQVAN++  +PR +
Sbjct: 8   LNEAQERMEMAAMYLDEQLARIRAGRANVAILDGIKVESYGMKVPLNQVANISTPDPRTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +  AEK+K
Sbjct: 68  AIKPWDRKAIRDIEKAIMDSDVGITPENNGEIIRLGIPQPTEERRKELVKQCNKIAEKTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I VRN+R +  +  KK+ K G  SED+    E+++QKI D  IK +D     K KEIM
Sbjct: 128 IEVRNVRGELKEKFKKAIKDG-LSEDLEKDAEDELQKIHDKFIKKLDDLIAAKTKEIM 184


>gi|300114873|ref|YP_003761448.1| ribosome recycling factor [Nitrosococcus watsonii C-113]
 gi|299540810|gb|ADJ29127.1| ribosome recycling factor [Nitrosococcus watsonii C-113]
          Length = 185

 Score =  142 bits (357), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 109/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  +++ LK+    LR  R   S+LD + V  YG++VPLNQVAN+ V + R L V+ W+
Sbjct: 12  RMDKSLTALKQTFAKLRANRAHTSLLDHITVSYYGNNVPLNQVANIAVEDARTLTVTPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           ++MV ++E+ I  S LGLNP+  G V+R+P+P  TEERR  +V++    AE +++++RNI
Sbjct: 72  RQMVPTIEKAIITSELGLNPVTAGTVIRVPLPVLTEERRREMVRLVRQEAEAARVAMRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD    +K+  K  + SED     E  IQKITD+ I  +D     K++++M
Sbjct: 132 RRDSNHTIKELIKEKEISEDDQRRAEEAIQKITDNHITQVDELLVVKEQDLM 183


>gi|320159761|ref|YP_004172985.1| ribosome recycling factor [Anaerolinea thermophila UNI-1]
 gi|319993614|dbj|BAJ62385.1| ribosome recycling factor [Anaerolinea thermophila UNI-1]
          Length = 185

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM   I  L++++  +RTGR SP++++ ++VE YG   PL Q+A+++  EPR+L
Sbjct: 6   LKEAETRMKGAIQALEENLAGIRTGRASPALVERLQVEYYGVPTPLMQLASISAPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +  +E+ I  S+LGL P  +G+V+R+ +P  TEERR  LVKV HA  E+S+
Sbjct: 66  MIRPFDTSSLRLIEKAIMASDLGLTPNNDGKVIRLNIPPLTEERRRELVKVVHARLEESR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RRD +  L+   K    SED +   E ++QK+TD  I+ ID+  ++K+KEIM 
Sbjct: 126 IAVRNVRRDMVKDLRDFEKEKLISEDDLKKGEEELQKLTDRYIQEIDAIGQKKEKEIME 184


>gi|89255661|ref|YP_513022.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314162|ref|YP_762885.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           OSU18]
 gi|118496843|ref|YP_897893.1| ribosome recycling factor [Francisella tularensis subsp. novicida
           U112]
 gi|134302594|ref|YP_001122565.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|156501611|ref|YP_001427676.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009898|ref|ZP_02274829.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           FSC200]
 gi|187932152|ref|YP_001892137.1| ribosome recycling factor [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|194324473|ref|ZP_03058245.1| ribosome recycling factor [Francisella tularensis subsp. novicida
           FTE]
 gi|254367052|ref|ZP_04983088.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           257]
 gi|254368532|ref|ZP_04984548.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           FSC022]
 gi|254372207|ref|ZP_04987699.1| ribosome recycling factor [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254373690|ref|ZP_04989174.1| hypothetical protein FTDG_01699 [Francisella novicida GA99-3548]
 gi|290953220|ref|ZP_06557841.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313588|ref|ZP_06804177.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           URFT1]
 gi|122325794|sp|Q0BNT6|RRF_FRATO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122501262|sp|Q2A5H9|RRF_FRATH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230786|sp|A7N9R7|RRF_FRATF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230787|sp|A0Q4H4|RRF_FRATN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230788|sp|A4IZU3|RRF_FRATW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238691516|sp|B2SDZ4|RRF_FRATM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|89143492|emb|CAJ78668.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129061|gb|ABI82248.1| protein-synthesizing GTPase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|118422749|gb|ABK89139.1| ribosome recycling factor [Francisella novicida U112]
 gi|134050371|gb|ABO47442.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134252878|gb|EBA51972.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           257]
 gi|151569937|gb|EDN35591.1| ribosome recycling factor [Francisella novicida GA99-3549]
 gi|151571412|gb|EDN37066.1| hypothetical protein FTDG_01699 [Francisella novicida GA99-3548]
 gi|156252214|gb|ABU60720.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|157121435|gb|EDO65626.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           FSC022]
 gi|187713061|gb|ACD31358.1| ribosome recycling factor [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|194321308|gb|EDX18794.1| ribosome recycling factor [Francisella tularensis subsp. novicida
           FTE]
 gi|328676312|gb|AEB27182.1| Ribosome recycling factor [Francisella cf. novicida Fx1]
          Length = 185

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 109/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  ++  L  D+  +RTGR  P +L  V ++ YG   P+ Q AN+TVL+ R L
Sbjct: 6   LKDAENRMKKSLEVLADDLAKIRTGRAHPDLLAHVTIDYYGVETPITQAANITVLDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K + + +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+  +  E  +
Sbjct: 66  GITPWEKGLSSKIEKAILTSDLGLNPTNLGDSLRVPMPALNEERRKELVKLVKSETEAGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD    +K+  K  + +ED     E+DIQKITD  I   D+   +K++++M
Sbjct: 126 VSIRNIRRDANGDIKELLKEKEITEDQAKKAEDDIQKITDKMIAQADALAAKKEQDLM 183


>gi|39997016|ref|NP_952967.1| ribosome recycling factor [Geobacter sulfurreducens PCA]
 gi|47116992|sp|P61304|RRF_GEOSL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39983904|gb|AAR35294.1| ribosome recycling factor [Geobacter sulfurreducens PCA]
 gi|298506033|gb|ADI84756.1| ribosome recycling factor [Geobacter sulfurreducens KN400]
          Length = 185

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 111/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + ++K  M  ++  L+++   +RTGR +  +LD ++V+ YG+  PLNQVA + V EPR +
Sbjct: 6   INDMKSHMEKSVESLRREYQKVRTGRANTGLLDEIRVDFYGNPSPLNQVATLAVPEPRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+ +M+  +E+ I  +NLG  P  +G+++RI +P  TEERR  +VK     AE +K
Sbjct: 66  TIQPWETKMIPVIEKAILNANLGFTPSNDGKLIRISLPPLTEERRKEIVKSLKKTAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RNIRRD +D LKK  K  K SED +   E ++Q +T+  +  +D     K+KE+M 
Sbjct: 126 IAIRNIRRDAIDGLKKLEKDKKISEDDLKRAEKEVQDVTNVYVAKVDEVLAHKEKEVME 184


>gi|187478231|ref|YP_786255.1| ribosome recycling factor [Bordetella avium 197N]
 gi|123515019|sp|Q2L159|RRF_BORA1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|115422817|emb|CAJ49345.1| ribosome recycling factor [Bordetella avium 197N]
          Length = 186

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 115/182 (63%), Gaps = 1/182 (0%)

Query: 4   VIDLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           V D++N  + RM  ++  LK ++  +RTGR    +LD V+VE YGS VP+ QVAN+ +++
Sbjct: 3   VADIRNSAESRMSKSLDTLKVNLSKIRTGRAHAGILDHVQVEYYGSPVPVGQVANLNLVD 62

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R + V  ++K M   +ER I +S+LGLNP+  G  +R+P+P  TEERR  L KV  +  
Sbjct: 63  ARTISVQPYEKHMAGPIERAIRDSDLGLNPVSLGDTIRVPMPALTEERRRDLTKVVRSEG 122

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E +K++VRN+RR+  + LKK  K    SED     ++++QK+TD  + +ID    +K+ E
Sbjct: 123 EDAKVAVRNLRREANEALKKLVKDKIISEDDERRGQDEVQKLTDRAVADIDKMVTQKEAE 182

Query: 183 IM 184
           IM
Sbjct: 183 IM 184


>gi|41409043|ref|NP_961879.1| ribosome recycling factor [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118463206|ref|YP_882906.1| ribosome recycling factor [Mycobacterium avium 104]
 gi|254776160|ref|ZP_05217676.1| ribosome recycling factor [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|47116995|sp|P61307|RRF_MYCPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230799|sp|A0QJ18|RRF_MYCA1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|41397402|gb|AAS05262.1| Frr [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118164493|gb|ABK65390.1| ribosome recycling factor [Mycobacterium avium 104]
          Length = 185

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 110/179 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D+ T+RTGR +P M   + ++ YG+  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRIVIDYYGAATPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   V ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A +  E +K
Sbjct: 66  VIKPYEASQVGAIETAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVRNIRR  M+ L + RK G+A ED V   E D+ K T   I  ID   + K+ E++ 
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDKTTHQYITQIDELVKHKEGELLE 184


>gi|255638439|gb|ACU19529.1| unknown [Glycine max]
          Length = 261

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 115/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ K RM  TI  ++ +  ++RTGR +PSMLD ++VE YGS V L  +A ++  +   L+
Sbjct: 83  KDAKTRMDRTIDNVRTNFSSIRTGRANPSMLDKIQVEYYGSPVSLKSIAQISTPDASSLL 142

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  + ++E+ I  S+LG+ P  +G+++R+ +P+ T +RR  L K+    AE+ K+
Sbjct: 143 VQPYDKSSLKAIEKAIVSSDLGMTPNNDGELIRLSIPQLTSDRRKELSKIVAKQAEEGKV 202

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD +    K  K  K SED V  L +D+QK+TD  +K +D+ F++K+KE++
Sbjct: 203 ALRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKELL 259


>gi|288928495|ref|ZP_06422342.1| ribosome recycling factor [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288331329|gb|EFC69913.1| ribosome recycling factor [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 186

 Score =  142 bits (357), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 112/178 (62%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ +DRM     +L++ +  +R GR + ++LD V+VE+YG  VPLNQVANV+  + R +
Sbjct: 8   LQDAQDRMEMAAMYLEEQLSRVRAGRANVAILDGVRVESYGMTVPLNQVANVSAPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK+ +  +E+ I +S++G+ P   G+V+R+ +P+ TEERR  L K  +   EKSK
Sbjct: 68  AIKPFDKKAIRDIEKAIMDSDVGITPENNGEVIRLGIPQPTEERRRELTKQCNKIGEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I VRN+R +  D LKK+ K G  SED     E  +QK+ D  IK ID   E K KEIM
Sbjct: 128 IEVRNVRAEIKDKLKKAIKDG-LSEDNEKDAEEKLQKLHDKFIKKIDELLEAKNKEIM 184


>gi|146281914|ref|YP_001172067.1| ribosome recycling factor [Pseudomonas stutzeri A1501]
 gi|145570119|gb|ABP79225.1| ribosome recycling factor [Pseudomonas stutzeri A1501]
          Length = 173

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 102/171 (59%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+  L      +RTGR  PS+LD V V  YG+  PL QVANV   + R L ++V+DK
Sbjct: 1   MKKTLEALDHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVVAEDSRTLALTVFDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE ++++VRNIR
Sbjct: 61  SMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRKGYTKQARAEAENARVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +  LK   K  + SED     ++D+QK+TD  +  ID   E K+ ++M
Sbjct: 121 RDAIAQLKDLVKEKEISEDEERRGQDDVQKLTDKYVAEIDKALEGKEADLM 171


>gi|118489544|gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 115/176 (65%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + K RM  TI  ++ +  ++RTGR +PSMLD ++VE YG+ V L  +A ++  +   L+V
Sbjct: 109 DAKGRMEKTIDTMRTNFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLV 168

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +DK  + ++E+ I  S+LGL P  +G+V+R+ +P+ T ERR  L K+    AE+ K++
Sbjct: 169 QPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVA 228

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +RNIRRD +   +K  K  K SED V  L +D+QK+TD  +K +D+ F++K+KE++
Sbjct: 229 LRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELL 284


>gi|260912507|ref|ZP_05919042.1| ribosome recycling factor [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260633386|gb|EEX51541.1| ribosome recycling factor [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 186

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/178 (42%), Positives = 113/178 (63%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ +DRM     +L++ +  +R GR + ++LD V+VE+YG  VPLNQVANV+  + R +
Sbjct: 8   LQDAQDRMEMAAMYLEEQLSRVRAGRANVAILDGVRVESYGMTVPLNQVANVSAPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK+ +  +E+ I +S++G+ P   G+V+R+ +P+ TEERR  L K  +   EK+K
Sbjct: 68  AIKPFDKKAIRDIEKAIMDSDVGITPENNGEVIRLGIPQPTEERRRELAKQCNKIGEKTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I VRN+R +  D LKK+ K G  SED     E+ +QK+ D  IK ID   E K KEIM
Sbjct: 128 IEVRNVRAEIKDKLKKAIKDG-LSEDNEKDAEDKLQKLHDKFIKKIDELLEAKNKEIM 184


>gi|228473766|ref|ZP_04058511.1| ribosome recycling factor [Capnocytophaga gingivalis ATCC 33624]
 gi|228274787|gb|EEK13610.1| ribosome recycling factor [Capnocytophaga gingivalis ATCC 33624]
          Length = 184

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 117/186 (62%), Gaps = 6/186 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ ID  L++ K+ M  +++ L+K ++ +R G+ SP ML  V V+ YGS  PL+QVANV
Sbjct: 1   MNEEIDFILESTKEAMQGSLNHLEKSLLNIRAGKASPQMLGSVYVDYYGSQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + +  W+K M++++E+ I  +NLG NP+  G+ + I VP  TEERR  LVK A
Sbjct: 61  NTPDSRTISIQPWEKNMLSTIEKAIMVANLGFNPMNNGETIIISVPPLTEERRKELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              +E++KI VRN R++    +KK+    +AS+D+    E  +QK+TD  IK ID    +
Sbjct: 121 KGESEEAKIGVRNARQEANKDIKKT----EASDDVKKDAEERVQKLTDKYIKQIDEVLAK 176

Query: 179 KKKEIM 184
           K+ EI+
Sbjct: 177 KEAEIL 182


>gi|93006537|ref|YP_580974.1| ribosome recycling factor [Psychrobacter cryohalolentis K5]
 gi|122415111|sp|Q1QA13|RRF_PSYCK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|92394215|gb|ABE75490.1| ribosome recycling factor [Psychrobacter cryohalolentis K5]
          Length = 184

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/177 (43%), Positives = 112/177 (63%), Gaps = 1/177 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  T+  L+     +RTGR  P ML  V V  YGS  PLNQVA+V V + R L+
Sbjct: 7   QDGEARMQKTLEALESTFSKVRTGRAHPGMLTGVMVSYYGSPTPLNQVASVNVEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +D+ MV ++++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE S++
Sbjct: 67  VQPFDRTMVQAIDKAIREADLGLNPMT-ADVIRVPMPALTEETRKDMQKLARGEAENSRV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRD M+ +K+  K  + SED      +DIQKITD  I+ IDS   +K+ ++M
Sbjct: 126 SIRNIRRDMMNDIKELAKEKEISEDDERRASDDIQKITDKYIETIDSRLSKKETDLM 182


>gi|332307502|ref|YP_004435353.1| ribosome recycling factor [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174831|gb|AEE24085.1| ribosome recycling factor [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 185

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 107/177 (60%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + + RM  ++  L+     +RTGR  PS+LD + V  YG+  PL Q+ANV   + R L +
Sbjct: 8   DARQRMEKSVVALRGQFTKIRTGRAHPSLLDSIMVPYYGAPTPLKQLANVIAEDSRTLAL 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +V+DK    +VE+ I +S+LGLNP+  G V+RIP+P  TEERR  L++V    AE  +++
Sbjct: 68  TVFDKSAAQAVEKAIMQSDLGLNPMSAGTVIRIPMPALTEERRKDLIRVVRNEAEGGRVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           VRNIRRD    +K+  K  + SED     E+ IQK+TD  +K ID     K+ E+M 
Sbjct: 128 VRNIRRDANGDIKELLKEKEISEDDAHRGEDAIQKLTDEFVKQIDEILAAKETELME 184


>gi|319937403|ref|ZP_08011810.1| flagellar biosynthetic protein flhB [Coprobacillus sp. 29_1]
 gi|319807769|gb|EFW04362.1| flagellar biosynthetic protein flhB [Coprobacillus sp. 29_1]
          Length = 181

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 115/178 (64%), Gaps = 4/178 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K++M  +I   K ++ T+RTGR +P+MLD V V  YG   PLNQ+A+++V+E R L
Sbjct: 6   LEETKEKMDKSIDAFKNELSTVRTGRANPTMLDRVMVNYYGEKTPLNQMASISVVEGRQL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +  +E G++E++LGL P  +G+V+RI VP  TEE R   VK A  +AE +K
Sbjct: 66  MIKPYDKSTLKDIEHGVYEADLGLAPQNDGEVIRINVPALTEETRRGYVKQAKKFAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRR   D + K+      +ED V   +  +QK+TD  +K ID   ++K++++M
Sbjct: 126 VALRNIRRSANDDVDKA----GLTEDEVKQGKERVQKLTDEYVKIIDQLAKDKEEDLM 179


>gi|320335233|ref|YP_004171944.1| ribosome-recycling factor [Deinococcus maricopensis DSM 21211]
 gi|319756522|gb|ADV68279.1| Ribosome-recycling factor [Deinococcus maricopensis DSM 21211]
          Length = 180

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 111/178 (62%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
             + + RM   I  L+  M  LRTGR +P +L  ++VE YGS +P++QVA++T  + R L
Sbjct: 5   FADTRARMTKAIEALENSMSVLRTGRANPGILKKIQVEYYGSTMPIDQVASITAPDARTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD+  +  +E+ I +S+LGLNP  +G  + I +P  TEERR  L+K A  YAE+ +
Sbjct: 65  VIQPWDRGAINPIEKAIRDSDLGLNPNNKGDSIFISIPALTEERRKDLIKNAKGYAEEGR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+R+  +D +KK    G   +D +   E +IQKITD  IK +D   + K+++I+
Sbjct: 125 VAIRNVRKSALDEIKKVEGVG---DDEIKRGEAEIQKITDEYIKKVDDVLDRKEQDIL 179


>gi|220909994|ref|YP_002485305.1| ribosome recycling factor [Cyanothece sp. PCC 7425]
 gi|254809507|sp|B8HL79|RRF_CYAP4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219866605|gb|ACL46944.1| ribosome recycling factor [Cyanothece sp. PCC 7425]
          Length = 182

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 111/177 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++D M  ++   ++   T+RTGR + S+LD V VE YG+  PL  +AN++  +   +
Sbjct: 3   LADVEDHMQKSVEATQRAFNTIRTGRANTSLLDRVTVEYYGAETPLRSLANISTPDSSTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  +  +E+ I  S+LGL P  +G V+R+ +P  T +RR  LVK A   AE+ K
Sbjct: 63  AIQPFDRNSLNLIEKAISMSDLGLTPNNDGTVIRLNIPPLTSDRRKELVKTASKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +S+RN+RRD +D +KK  K+G+ SED V  L++ IQK+TD  I  +D    EK+K+I
Sbjct: 123 VSIRNVRRDAVDSVKKQGKAGELSEDEVKDLQDKIQKLTDKYIAKVDGLLAEKEKDI 179


>gi|226945938|ref|YP_002801011.1| ribosome recycling factor [Azotobacter vinelandii DJ]
 gi|259494533|sp|C1DSU3|RRF_AZOVD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226720865|gb|ACO80036.1| ribosome recycling factor [Azotobacter vinelandii DJ]
          Length = 185

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 106/177 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L+     +RTGR  PS+LD V V  YG+  PL QVANV   + R L 
Sbjct: 7   KDAQARMKKSLESLEHAFAKIRTGRAHPSILDGVMVSYYGADTPLRQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    + A A AE +++
Sbjct: 67  LTVFDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRKGYTRQARAEAESARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  LK   K  + SED      +++QK+TD  I  +D   E K+ ++M
Sbjct: 127 AVRNIRRDALAQLKDLVKEKEISEDEERRAADEVQKLTDKAIAEVDKALEAKEADLM 183


>gi|322437107|ref|YP_004219319.1| ribosome recycling factor [Acidobacterium sp. MP5ACTX9]
 gi|321164834|gb|ADW70539.1| ribosome recycling factor [Acidobacterium sp. MP5ACTX9]
          Length = 194

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 111/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q +K R   T+   + ++++ RTGR S  MLD VKV+ YG+  P++QVA +T  E ++++
Sbjct: 16  QQLKTRFEKTVDDFRANLLSARTGRASVHMLDQVKVDYYGTDTPISQVAQITTPEAQLIL 75

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W++ +V ++E+ I  SN G NP+ +G+++R+P+P   EERR   VK      E  K 
Sbjct: 76  VQPWEQTLVTAIEKAIRTSNQGFNPMHDGRIIRVPIPPMNEERRKEAVKNLAGVLEGHKT 135

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + +KK+ K    S D       ++Q++TD+ IK ++  F+ K+KE+M
Sbjct: 136 SMRNIRRDGNELIKKAAKDKLISADDEKRANEEVQQLTDAEIKRLEDLFKAKEKELM 192


>gi|109897577|ref|YP_660832.1| ribosome recycling factor [Pseudoalteromonas atlantica T6c]
 gi|123361091|sp|Q15WG0|RRF_PSEA6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|109699858|gb|ABG39778.1| ribosome recycling factor [Pseudoalteromonas atlantica T6c]
          Length = 185

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 107/177 (60%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + + RM  ++  L+     +RTGR  PS+LD + V  YG+  PL Q+ANV   + R L +
Sbjct: 8   DARQRMEKSVLALRGQFTKIRTGRAHPSLLDSIMVPYYGAPTPLKQLANVIAEDSRTLAL 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +V+DK    +VE+ I +S+LGLNP+  G V+RIP+P  TEERR  L++V    AE  +++
Sbjct: 68  TVFDKSAAQAVEKAIMQSDLGLNPMSAGTVIRIPMPALTEERRKDLIRVVRNEAEGGRVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           VRNIRRD    +K+  K  + SED     E+ IQK+TD  +K ID     K+ E+M 
Sbjct: 128 VRNIRRDANGDIKELLKEKEISEDDAHRGEDAIQKLTDEFVKQIDDILAAKETELME 184


>gi|288803716|ref|ZP_06409145.1| ribosome recycling factor [Prevotella melaninogenica D18]
 gi|302345756|ref|YP_003814109.1| ribosome recycling factor [Prevotella melaninogenica ATCC 25845]
 gi|288333805|gb|EFC72251.1| ribosome recycling factor [Prevotella melaninogenica D18]
 gi|302149258|gb|ADK95520.1| ribosome recycling factor [Prevotella melaninogenica ATCC 25845]
          Length = 186

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 114/178 (64%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM     +L  ++  +R GR + ++LD V+VE+YGS VPLNQVA+V V + R +
Sbjct: 8   LNDASERMEMATMYLGDELQRIRAGRANVAILDGVRVESYGSKVPLNQVASVMVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIKPWDKKAIKDIEKAIMDSDVGITPENNGELIRLNLPQPTEERRRDLVKQCNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + +RN+R D  + LKK+ K G  SED     E  +QKI D  IK +D+  E+K+KEIM
Sbjct: 128 VEIRNVRSDIKEKLKKAIKDG-LSEDNEKDAEESLQKIHDKFIKQVDTLLEDKQKEIM 184


>gi|187251116|ref|YP_001875598.1| ribosome recycling factor [Elusimicrobium minutum Pei191]
 gi|186971276|gb|ACC98261.1| Ribosome recycling factor [Elusimicrobium minutum Pei191]
          Length = 187

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 114/171 (66%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M D +  LK+D+ T+RTGR S  +++ ++V+ YG+  PL Q+A + V + R L +S WD 
Sbjct: 15  MNDHVERLKRDLGTIRTGRASTQLIENIRVDYYGTPTPLKQMAMINVTDARTLEISPWDI 74

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +++ + +++LG +P+ +G+++RI +P  TE+RR  LVK     +E  K++VRN R
Sbjct: 75  SALNEIDKTLQKADLGASPVNDGKIIRIVLPNMTEDRRKMLVKNVSKMSEDFKVAVRNER 134

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD ++ LKK++K+G+ +ED +   E DIQK TDST+  ID    +K+KEIM
Sbjct: 135 RDVLEKLKKAQKAGEITEDDLKRYEGDIQKATDSTVALIDKTISDKEKEIM 185


>gi|38234084|ref|NP_939851.1| ribosome recycling factor [Corynebacterium diphtheriae NCTC 13129]
 gi|47116991|sp|P61303|RRF_CORDI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|38200346|emb|CAE50032.1| ribosome recycling factor [Corynebacterium diphtheriae]
          Length = 185

 Score =  141 bits (356), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 110/175 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++ M  ++   + +++ +RTGR +P+M + V  + YG   P+ Q+A ++V E RML++  
Sbjct: 10  EEHMNTSVERTRDELVNIRTGRANPAMFNGVIADYYGVPTPITQMATISVPEARMLLIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++  M+  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  + K+A +  E  KI++R
Sbjct: 70  YEMSMMNEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMAKLAKSKGEDGKIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+RR GMD LKK +K G A ED V + E ++ K+T   +  +D    +K+ E+M 
Sbjct: 130 NVRRKGMDQLKKIQKDGDAGEDEVQAAEKELDKVTAKYVAQVDEVVAKKEAELME 184


>gi|169333879|ref|ZP_02861072.1| hypothetical protein ANASTE_00265 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259444|gb|EDS73410.1| hypothetical protein ANASTE_00265 [Anaerofustis stercorihominis DSM
           17244]
          Length = 185

 Score =  141 bits (355), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 111/168 (66%), Gaps = 1/168 (0%)

Query: 6   DLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++QN  K++M   +  L+ ++  LR GR +P MLD + V+ YG+  P+NQ+A+++  EPR
Sbjct: 4   EVQNQAKEKMIKAVENLQSNLNALRAGRANPKMLDRIMVDYYGTPTPVNQMASISAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L V  WD+  +  +E+ I  S+LGLNP  +G+V+R+ +P+ TEERR  LVK+A    E 
Sbjct: 64  TLTVQPWDQSALGLIEKAIMSSDLGLNPSNDGKVIRLVIPQLTEERRKELVKLAQKEGEN 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
           +K++VRNIRR  +  LK  +K G+ +ED +   E+++QK+T+  IK +
Sbjct: 124 AKVAVRNIRRHTIQTLKDEQKKGELTEDSLKDAEDEMQKLTNDYIKEV 171


>gi|120434469|ref|YP_860171.1| ribosome recycling factor [Gramella forsetii KT0803]
 gi|166230790|sp|A0LXJ3|RRF_GRAFK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|117576619|emb|CAL65088.1| ribosome recycling factor [Gramella forsetii KT0803]
          Length = 183

 Score =  141 bits (355), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 109/178 (61%), Gaps = 4/178 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K+ M   I+ LKK +  +R G+ SPSML  V VE YGS  PL QVANV   + R L
Sbjct: 8   LEEAKEGMEKAITHLKKQLSNIRAGKASPSMLGSVMVEYYGSQTPLQQVANVNTPDARTL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  ++K ++  +ERGI  +NLG NP+  G+ + I VP  TEERR  L K A A AE +K
Sbjct: 68  SIQPFEKSLITEIERGIMLANLGFNPMNNGESVIINVPPLTEERRKQLSKQAKAEAEDAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VRN R+  M  LKK+      SED++ S E+++Q++T++ I+ ID     K+ EIM
Sbjct: 128 VGVRNDRKQAMQELKKA----DISEDLLKSSEDEVQELTNTYIERIDKILTVKETEIM 181


>gi|325001877|ref|ZP_08122989.1| ribosome recycling factor [Pseudonocardia sp. P1]
          Length = 185

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++++M   +   + D+  +RTGR +PSM   + V+ YG+  PLNQ+A+V++ E RM 
Sbjct: 6   LFDVEEKMEKAVGVARDDLTGVRTGRATPSMFSRIVVDYYGAATPLNQLASVSIPEARMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   + ++E+ I ES+LG+NP  +GQ++R+ +P+ +EERR  +VKVA    E ++
Sbjct: 66  VIKPYDASQLKAMEKAIAESDLGVNPSNDGQIIRVIIPQLSEERRRDMVKVARGKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           + +R +RR  MD L + ++ G+A ED V   E ++Q +TD  +  ID   + K+ E++ 
Sbjct: 126 VVMRGLRRKAMDELHRIQRDGEAGEDEVVRGEKELQVLTDRYVAQIDELVKNKESELLE 184


>gi|163815219|ref|ZP_02206596.1| hypothetical protein COPEUT_01379 [Coprococcus eutactus ATCC 27759]
 gi|158449414|gb|EDP26409.1| hypothetical protein COPEUT_01379 [Coprococcus eutactus ATCC 27759]
          Length = 184

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 112/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  ++  L+ +  T+R GR +P++L+ ++VE YG   P+ Q+AN+TV E R L
Sbjct: 5   LSQYEEKMQKSLDNLEAEYATIRAGRANPNILNKLRVEYYGVPTPMQQLANITVPEARTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+  +V  +E+ I  S++G+ P  +G+ + +  PE TE+RR  LVK      E +K
Sbjct: 65  MIAPWEPSLVKEIEKAIMNSDIGITPNNDGRNIILNFPELTEDRRKELVKDIKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD  D +KK  KSG  SED +A  E+ IQK+TD  +  ID   E K KEIM
Sbjct: 125 VAIRNIRRDANDAIKKMEKSGDISEDELADNEDKIQKLTDKYVGQIDKAVEAKSKEIM 182


>gi|319946529|ref|ZP_08020764.1| ribosome recycling factor [Streptococcus australis ATCC 700641]
 gi|319747275|gb|EFV99533.1| ribosome recycling factor [Streptococcus australis ATCC 700641]
          Length = 185

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + V+ YG   PLNQ+A++T+ E R++
Sbjct: 6   VEKAKERMSQSHQSLGREFGSIRAGRANASLLDRIYVQYYGVDTPLNQIASITIPEARVM 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E  ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LITPFDKSSLKDIEHALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD MD  KK  K+ + +ED +  LE +IQK+TD  +K+ID     K+KE++
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKGLEKEIQKVTDDAVKHIDEMTAHKEKELL 183


>gi|325955634|ref|YP_004239294.1| ribosome-recycling factor [Weeksella virosa DSM 16922]
 gi|323438252|gb|ADX68716.1| Ribosome-recycling factor [Weeksella virosa DSM 16922]
          Length = 184

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 107/174 (61%), Gaps = 3/174 (1%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M  T+  L      LR G+ SP+ML  VK++ YGS  PL+QVAN+   +   + V  
Sbjct: 12  KEQMQKTMEHLDNAFGKLRAGKASPAMLSTVKIDYYGSVTPLSQVANINTPDAMTISVQP 71

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W++ ++  +E+ I  SNLG  P   G ++ I +P  TEERR  L K+A A AE +K+S+R
Sbjct: 72  WERNLIGEIEKAIINSNLGFAPSNNGDMIIINIPPLTEERRKELSKLAKAEAEHAKVSIR 131

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R+D  ++LK  +     SED+V   ENDIQ +TD+ IKNID  F +K+ EIM
Sbjct: 132 NARKDANNNLKNIK---DISEDVVKGYENDIQDLTDNYIKNIDVAFAKKESEIM 182


>gi|225849796|ref|YP_002730030.1| ribosome recycling factor [Persephonella marina EX-H1]
 gi|225646194|gb|ACO04380.1| ribosome recycling factor [Persephonella marina EX-H1]
          Length = 184

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + RM   +   K+++ ++RTGR S  +++ +KV+ YG+ +PL Q+A++T  EP  +
Sbjct: 6   LKDAEKRMKKAVEKFKEELASIRTGRASVGLVENIKVDYYGAEMPLKQIASITTPEPSQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD+  V ++E+ + E+NLG NP  EG ++R+ +P  TEERR  +VK+    AE+++
Sbjct: 66  LIQAWDQNAVPAIEKALQEANLGANPQTEGNLIRLILPPMTEERRREIVKMLGKMAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  + ++  +K G  SED V      +QKITD  IK I+     K++EI+  
Sbjct: 126 IAIRNIRRDDKERIEDLKKEG-FSEDEVKKALEQLQKITDKYIKQINDLATAKEEEILSI 184


>gi|281420570|ref|ZP_06251569.1| ribosome recycling factor [Prevotella copri DSM 18205]
 gi|281405343|gb|EFB36023.1| ribosome recycling factor [Prevotella copri DSM 18205]
          Length = 186

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 116/178 (65%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM     +L +++  +R GR + ++LD V+V +YGS VPLNQVA VT  + R +
Sbjct: 8   LNSAAERMEMAAMYLAEELSHVRAGRANVAILDGVRVNSYGSMVPLNQVATVTTPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S +G+ P   G+++R+ +P+ T ERR  LVK  +  AE++K
Sbjct: 68  AIRPWDKKAIKDIEKAIMDSGVGITPENNGEIVRLGIPQPTGERRKELVKQCNKIAERAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I VRN+R++  + LKK+ K G  SED+    END+QK+ D  IK +++  +EK+KEIM
Sbjct: 128 IEVRNVRQEIKEKLKKAIKDG-LSEDLEKDAENDLQKLHDKYIKQLENLMDEKEKEIM 184


>gi|299136134|ref|ZP_07029318.1| ribosome recycling factor [Acidobacterium sp. MP5ACTX8]
 gi|298602258|gb|EFI58412.1| ribosome recycling factor [Acidobacterium sp. MP5ACTX8]
          Length = 194

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 110/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + +K RM  T    + +++++RTGR S  MLD VKV+ YG+   + QVA VT  E  ++V
Sbjct: 16  EELKSRMDKTAEDFRANLLSVRTGRASVHMLDNVKVDYYGTETAIAQVAQVTTPEANLIV 75

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W++ +V ++E+ I  S+ G NP+ +G+++R+P+P  TEERR   +K      E  K 
Sbjct: 76  VQPWEQSLVQAIEKAIRTSSQGFNPMHDGKIIRVPIPPMTEERRREGIKQLAGVLEDHKT 135

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + +KK+ K    S D       +IQ++TDS IK ++  F+ K+KE+M
Sbjct: 136 SIRNIRRDGNETVKKAAKDKLISADDEKRANEEIQQLTDSQIKRVEDLFKAKEKEVM 192


>gi|297538506|ref|YP_003674275.1| ribosome recycling factor [Methylotenera sp. 301]
 gi|297257853|gb|ADI29698.1| ribosome recycling factor [Methylotenera sp. 301]
          Length = 185

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D++ + D +M   +  LK D+  +RTGR    +LD V VE YGS V +NQVANV + + R
Sbjct: 4   DIKKVVDQKMQRALEALKTDLAKVRTGRAHTGLLDHVMVEYYGSMVAVNQVANVNLGDSR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + V  ++K M+  VE+ I + +LGLNP   G ++R+P+P  TEERR  + K+  + AE 
Sbjct: 64  TIHVQPFEKSMIGKVEKAIRDCDLGLNPATNGDLIRVPMPMLTEERRRDMTKIVRSEAEG 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+SVRN RRD  D LKK  K  + SED     ++D+QK TD  +  ID   + K+ E+M
Sbjct: 124 AKVSVRNARRDANDTLKKLLKDKEISEDEERRAQDDVQKATDKAVAEIDKMLQVKEVELM 183


>gi|189500982|ref|YP_001960452.1| ribosome recycling factor [Chlorobium phaeobacteroides BS1]
 gi|238692272|sp|B3EMY2|RRF_CHLPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189496423|gb|ACE04971.1| ribosome recycling factor [Chlorobium phaeobacteroides BS1]
          Length = 186

 Score =  140 bits (354), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 110/180 (61%), Gaps = 6/180 (3%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  + +M  ++   + ++  +RTG+ + ++LD VKV+AYG  +PL Q+ NV V +   L+
Sbjct: 8   QKAEAKMKKSVESFQHEIAAIRTGKATTALLDHVKVDAYGQTMPLKQIGNVGVQDAHTLM 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MVA+ E+ I ++NLGLNP+ EGQ +R+ +P   EERR   VK+   Y E +KI
Sbjct: 68  VQVWDKSMVAATEKAIRDANLGLNPVAEGQSIRVSIPPLNEERRKEYVKLTKKYGEDAKI 127

Query: 128 SVRNIRRD---GMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RR+   G D L+K ++ G   ED  A+ + D   +     K I     +K+KEIM
Sbjct: 128 ALRNLRREMLHGADKLEKDKEIG---EDAKANCKKDADNLVHKYEKQISDMIVQKEKEIM 184


>gi|309791083|ref|ZP_07685618.1| ribosome recycling factor [Oscillochloris trichoides DG6]
 gi|308226867|gb|EFO80560.1| ribosome recycling factor [Oscillochloris trichoides DG6]
          Length = 185

 Score =  140 bits (354), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 112/171 (65%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M      LK  + T+RTGR S  M++ ++VEAYG+H+PLNQ+AN++V E R++V+  +D 
Sbjct: 13  MRKATEALKHHLATIRTGRASSGMVEHLQVEAYGTHMPLNQLANISVPESRLIVIQPFDN 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M+  +E+ I  S+L +NP  +G+V+R+ VP+ TEERR  +VK+     E+ KISVRN R
Sbjct: 73  GMIKIIEKAIQNSDLSINPSNDGRVIRLAVPQLTEERRREMVKMVRHRVEEVKISVRNQR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +D LK+  +    SED +   +  IQ++T+ T K++D    EK+ E++
Sbjct: 133 RDAIDDLKQLEEEKLISEDDLHRGQERIQQLTERTSKDLDQIGSEKEAEVL 183


>gi|258647586|ref|ZP_05735055.1| ribosome recycling factor [Prevotella tannerae ATCC 51259]
 gi|260852386|gb|EEX72255.1| ribosome recycling factor [Prevotella tannerae ATCC 51259]
          Length = 186

 Score =  140 bits (354), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 110/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + +M  ++  L++ +  +R GR +  +LD +++ +YGS VPLN VA +T  + R +
Sbjct: 8   LADCEKKMDASVMHLEETLAQIRAGRANVHILDAIRINSYGSMVPLNNVAAITTPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M A +E+ I +S +G+ P   G+V+R+ +P  TEERR  L K  +   E++K
Sbjct: 68  AIKPWDKSMFAPIEKAIIDSEVGIMPENNGEVIRLAIPALTEERRKQLAKQCNKEGEEAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN RR+G D LKK+ K G  SED     E D+QKI D  +K +D+   EK KEIM
Sbjct: 128 MAIRNARREGNDKLKKALKDG-LSEDSEKDAEADLQKIHDRKVKQVDTLLAEKNKEIM 184


>gi|295396951|ref|ZP_06807073.1| ribosome recycling factor [Aerococcus viridans ATCC 11563]
 gi|294974804|gb|EFG50509.1| ribosome recycling factor [Aerococcus viridans ATCC 11563]
          Length = 186

 Score =  140 bits (354), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 112/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  KDRM  +     + +  +R G  + S+LD + VE YG    L Q+A +T+ EPRML
Sbjct: 7   LKETKDRMVKSEEAFTRTLARIRAGVANASLLDGITVEYYGVPTDLRQLATITIPEPRML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S +DK  +  +ER + +S+LG+ P  +G V+R+ +P  T+ERR  L K      E +K
Sbjct: 67  QISPYDKSSLNDIERALQQSDLGIPPTNDGSVIRLIIPALTQERRKELSKTVGKDLEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RNIRRD +D  KK+ K+ + +ED V S E+DIQ +T++ IKN++    +K+ EIM+
Sbjct: 127 IAIRNIRRDAIDETKKAEKAKEITEDDVRSYESDIQDLTNAAIKNVEKIASDKEDEIMN 185


>gi|225375366|ref|ZP_03752587.1| hypothetical protein ROSEINA2194_00991 [Roseburia inulinivorans DSM
           16841]
 gi|225212855|gb|EEG95209.1| hypothetical protein ROSEINA2194_00991 [Roseburia inulinivorans DSM
           16841]
          Length = 183

 Score =  140 bits (354), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 109/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  T++ L ++  ++R GR +P +LD ++V+ YG+  P+ QVANV V EPRM+
Sbjct: 5   LVQFDEKMQKTMNNLSEEFGSIRAGRANPHVLDKLRVDYYGTPTPIQQVANVNVPEPRMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  MV  +E+ I  S+LG+NP  +G+ +R+  PE TEERR  L K      E +K
Sbjct: 65  QIQPWEASMVKEIEKVIMTSDLGINPTNDGKTIRLLFPELTEERRKDLAKDVKKKGESAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD  D  KK  K    SED + +LE + QK+TD  I  +D   E K KEI+
Sbjct: 125 VAIRNIRRDANDSFKKLAKED-VSEDEIKALEENAQKMTDKYIAAVDEAVEVKTKEIL 181


>gi|7388105|sp|P82231|RRFC_SPIOL RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
 gi|4689034|emb|CAB41419.1| chloroplast ribosome recycling factor protein [Spinacia oleracea]
          Length = 271

 Score =  140 bits (354), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 113/176 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N K RM  TI  ++ +  ++RT R SP+MLD ++VE YG+ V L  +A ++  +   L++
Sbjct: 94  NTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLI 153

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S +DK  + ++E+ I  S LG++P  +G+V+R+ +P  T +RR  L KV    AE+ K++
Sbjct: 154 SPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVA 213

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VRNIRRD +   +K  K  K SED V  L  D+QK+TD  +K ++S +++K++E+M
Sbjct: 214 VRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELM 269


>gi|33863513|ref|NP_895073.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9313]
 gi|39932089|sp|Q7V6C1|RRF_PROMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33640962|emb|CAE21420.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9313]
          Length = 182

 Score =  140 bits (354), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 111/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q +KD M  ++   +++  T+RTGR +PS+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   QELKDNMHKSVEATQRNFATIRTGRANPSLLDRINVEYYGTETPLKSLATISTPDSQTIA 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +  +E+ I  S+LGL P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDNGSMGLIEKAIATSDLGLTPNNDGKIIRINVPPLTEERRKEFCKLAARYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD +D +KK  K  + S+D     ++ IQK+TD+ I  I+ +  EK+ +I+
Sbjct: 124 ALRNIRRDAIDKVKKLEKDAELSKDQSHDEQDGIQKLTDTFITEIEKYLAEKEADIL 180


>gi|270290321|ref|ZP_06196546.1| ribosome recycling factor [Pediococcus acidilactici 7_4]
 gi|270281102|gb|EFA26935.1| ribosome recycling factor [Pediococcus acidilactici 7_4]
          Length = 186

 Score =  140 bits (354), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 116/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M      L++D+ ++R GR + S+LD V V+ YG+  PLNQ+A++++ EPR+L
Sbjct: 7   LKTAEEKMHKAHQALERDLGSIRAGRANASLLDRVTVDYYGAPTPLNQMASISIPEPRVL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ +  ++LG+NP  +G  +R+ +P+ TEE R  L K   A  EK K
Sbjct: 67  LITPYDKSVLNDIEQALLVADLGINPANDGSAIRLVIPQLTEETRKELAKDVKAEGEKGK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+RR+ M+ LKK+ K+G  ++D    LE   Q ITD  IK ++     K+KE++
Sbjct: 127 VAIRNVRREAMEALKKAHKNGDYNDDEFHDLEKQAQDITDKAIKKVEEIVANKEKEVL 184


>gi|332970849|gb|EGK09828.1| ribosome recycling factor [Psychrobacter sp. 1501(2011)]
          Length = 184

 Score =  140 bits (354), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 110/173 (63%), Gaps = 1/173 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  L+     +RTGR  P ML  V V  YG+  PLNQVA+V V + R L+V  ++
Sbjct: 12  RMKKSLEALENAFSKVRTGRAHPGMLSGVMVNYYGADTPLNQVASVNVEDSRTLLVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MV +V++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE S++SVRN+
Sbjct: 72  RSMVQAVDKAIREADLGLNPMT-ADVIRVPMPALTEETRRDMQKLARGEAENSRVSVRNV 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD ++ +K+  K  + SED      +DIQK+TD  I +IDS  E K+KE+M 
Sbjct: 131 RRDMLNDVKELAKEKEISEDEERRASDDIQKLTDKYIASIDSKLEAKEKELME 183


>gi|304383036|ref|ZP_07365512.1| ribosome recycling factor [Prevotella marshii DSM 16973]
 gi|304335819|gb|EFM02073.1| ribosome recycling factor [Prevotella marshii DSM 16973]
          Length = 186

 Score =  140 bits (354), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 76/178 (42%), Positives = 110/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM     FL++ +  +R GR + ++LD +KV +YGS VPLNQVANV V + R +
Sbjct: 8   LSESEERMEMAAMFLEEQLARIRAGRANVAILDGIKVNSYGSMVPLNQVANVAVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  L K   A  EK+K
Sbjct: 68  TVRPWDKKAIKDIEKAIMDSDVGITPENNGEIIRLGIPQPTEERRRELSKQCKAIGEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VRN+R D  + LKK+ K G  SED     E+ +QKI D  IK ID     K KEIM
Sbjct: 128 VEVRNVRADVKEKLKKAIKDG-LSEDNEKDAEDALQKIHDRYIKKIDDLLVAKDKEIM 184


>gi|303258058|ref|ZP_07344066.1| ribosome recycling factor [Burkholderiales bacterium 1_1_47]
 gi|330998729|ref|ZP_08322458.1| ribosome recycling factor [Parasutterella excrementihominis YIT
           11859]
 gi|302859077|gb|EFL82160.1| ribosome recycling factor [Burkholderiales bacterium 1_1_47]
 gi|329576468|gb|EGG57980.1| ribosome recycling factor [Parasutterella excrementihominis YIT
           11859]
          Length = 186

 Score =  140 bits (354), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 107/171 (62%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +I  LK+++M +RTGR    +L+ + V+ YG   P++QVA + + + R + V  W+K
Sbjct: 14  MKRSIETLKENLMKIRTGRAHTGLLEHITVDYYGCPTPISQVAQLGLADARTITVQPWEK 73

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
           +MVA VE+ I  S+LGLNP   G+V+R+P+P  TEERR  L KV  +  E++K+++RN+R
Sbjct: 74  KMVAVVEKAIRNSDLGLNPATSGEVIRVPMPPLTEERRRDLTKVVRSEGEETKVAIRNLR 133

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD  + +    K  + SED       +IQK+TD  I  +D    EK+KEIM
Sbjct: 134 RDANNKVAALVKEKEISEDDERRSNTEIQKLTDKYIGEVDKLIAEKEKEIM 184


>gi|254443219|ref|ZP_05056695.1| ribosome recycling factor [Verrucomicrobiae bacterium DG1235]
 gi|198257527|gb|EDY81835.1| ribosome recycling factor [Verrucomicrobiae bacterium DG1235]
          Length = 186

 Score =  140 bits (354), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 64/156 (41%), Positives = 101/156 (64%)

Query: 28  LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           + TG+ +P M++ + VEAYGS + L ++A +T  + R + +  WDK ++ ++E+ I  SN
Sbjct: 28  VNTGKANPGMVEGISVEAYGSQMSLKEMAAITTPDARTIAIQPWDKSVIKAIEKAILTSN 87

Query: 88  LGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSG 147
           +G+ P + G V+R+P+PE T ERR +LVKV    AE  ++++RN RRD MD +KK +K G
Sbjct: 88  IGITPAIMGDVIRLPLPELTGERRQSLVKVVSKQAEDGRVAIRNSRRDAMDAIKKLQKDG 147

Query: 148 KASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
             SED +   E DIQ  TD +IK I+     K+K++
Sbjct: 148 DISEDDLKRCEKDIQNTTDESIKKINDLLAAKEKDL 183


>gi|258591445|emb|CBE67746.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF) [NC10
           bacterium 'Dutch sediment']
          Length = 185

 Score =  140 bits (353), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 109/173 (63%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   I    K    +RTGR S ++LD + VEAYGS VP+NQVA + V E R++ V  WD 
Sbjct: 13  MRKAIDATLKGFNGVRTGRASLTLLDGLMVEAYGSIVPVNQVATLAVPETRLITVQPWDP 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++A++ER   +S+LG++P  +G+++RI +P  TEERR  LVK+    AE+ +++VRN+R
Sbjct: 73  SLLAAIERAFRKSDLGVSPTNDGKMIRIAIPPLTEERRKELVKIVRKIAEEGRVAVRNVR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           R+  + LK+  +  + SED V    + IQ +T+  I  ID    +K+KEIM F
Sbjct: 133 REANEALKRHEREKEVSEDEVKHGADVIQDLTNRLIHEIDGLLAKKEKEIMEF 185


>gi|307298261|ref|ZP_07578065.1| ribosome recycling factor [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916347|gb|EFN46730.1| ribosome recycling factor [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 184

 Score =  140 bits (353), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  ++  + ++   +RTGR SP++L+ VKV+ YG   P+NQ+A +T  E R L
Sbjct: 5   LKDAENRMKKSVEKIVEEYAQMRTGRPSPALLESVKVDYYGVPTPINQIATITTTEDRSL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD+ +++ VE+ I  S L L PI +G  +++  P  T E+R   VK+A   AEK K
Sbjct: 65  VIKPWDRSVLSQVEKAIFASKLDLTPINDGVNIKLNFPVPTTEQREKWVKIARDNAEKGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD +   ++  K+ + +ED +   E +IQ++T+  I+ +D  FE+K KEIM F
Sbjct: 125 IAIRNIRRDVIKEARELEKASEMTEDDLKKFEEEIQELTNRYIEEMDKAFEKKSKEIMDF 184


>gi|317051930|ref|YP_004113046.1| ribosome recycling factor [Desulfurispirillum indicum S5]
 gi|316947014|gb|ADU66490.1| ribosome recycling factor [Desulfurispirillum indicum S5]
          Length = 185

 Score =  140 bits (353), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 107/175 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +K++M   +   +KD  TLRTGR S ++LD VKV+ YG+  PL Q  +VT+ +   + + 
Sbjct: 9   VKEKMQKAVEATRKDFSTLRTGRASTALLDNVKVDYYGTPTPLKQAGSVTIPDATTISIQ 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            W+  M+ ++E+ I  +NLG+ P  +GQ++RI +P  TE+RR  L +    +AE  +I+V
Sbjct: 69  PWEPHMLPAIEKAIVAANLGVTPSNDGQMIRISIPPLTEDRRKELTRQVKKFAEDGRIAV 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRR G D +K   K    +ED     + ++QKITD  +K ID   E K+KE+M
Sbjct: 129 RNIRRFGNDSVKALEKDKLITEDEAKRAQEEVQKITDGFVKTIDEMAEAKEKELM 183


>gi|222054617|ref|YP_002536979.1| ribosome recycling factor [Geobacter sp. FRC-32]
 gi|254809513|sp|B9M5C3|RRF_GEOSF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|221563906|gb|ACM19878.1| ribosome recycling factor [Geobacter sp. FRC-32]
          Length = 185

 Score =  140 bits (353), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 111/172 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  TI  L+K+   +RTGR S S+LD +KV+ YG+  PLNQVA + V EPR + +  WD 
Sbjct: 13  MDKTIDSLRKEYQKVRTGRASTSLLDEIKVDFYGTLSPLNQVATLAVPEPRTITLQPWDA 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
           +M+  +E+ I  +NLGL P  +G+++R+ +P  TEERR  +VK    +AE +K++VRNIR
Sbjct: 73  KMIPPIEKAIMNANLGLTPANDGKLIRLNLPPLTEERRKEIVKQLKKFAEDAKVAVRNIR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R+ +D LKK  K  K SED +   E D+Q +T+S +  ID     K+KE+M 
Sbjct: 133 REAIDDLKKLEKEKKISEDDLKRAEKDVQDVTNSHVARIDEVLLHKEKEVME 184


>gi|319789070|ref|YP_004150703.1| ribosome recycling factor [Thermovibrio ammonificans HB-1]
 gi|317113572|gb|ADU96062.1| ribosome recycling factor [Thermovibrio ammonificans HB-1]
          Length = 185

 Score =  140 bits (353), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 114/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++   RM   +  LK D   LRTGR S  +++ +KV+ YGS + + Q+A ++V E   +
Sbjct: 6   LKDADKRMKKAVEVLKADFAGLRTGRASTVLVEDIKVDYYGSTMTIKQIAQISVPEANQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD  +V +VE+ I ES+LG+ P  +G ++R+ +P  TEERR  LVK A   AE+++
Sbjct: 66  VIQPWDASVVPNVEKAIRESDLGVQPQRDGNIIRVILPPLTEERRKELVKKAGKMAEQAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIR + M  L K +K G  SED +   ++++QKITD   K +D+  ++K++EI+
Sbjct: 126 IAIRNIRHEIMKELDKLKKEGGYSEDDIKRAKDELQKITDKYTKEVDNLLQKKEEEIL 183


>gi|271963401|ref|YP_003337597.1| ribosome recycling factor [Streptosporangium roseum DSM 43021]
 gi|270506576|gb|ACZ84854.1| ribosome recycling factor [Streptosporangium roseum DSM 43021]
          Length = 185

 Score =  140 bits (353), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 110/179 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +S  K D   +RTGRV+PSM + +  E YG+  P+ Q+A+  V E RM+
Sbjct: 6   LLEAEEKMDKAVSVAKDDFAGIRTGRVTPSMFNKISAEYYGTPTPIQQLASFHVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +A++E+ I  S+LG+NP  +GQV+R+  PE +EERR   +KVA   AE+SK
Sbjct: 66  IIQPFDKGSMAAIEKAIRNSDLGVNPGNDGQVIRVAFPELSEERRREYIKVARNKAEQSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RNIRR+  + L K  K  +A ED V   E ++  +T   +  ID   + K+ E++ 
Sbjct: 126 VSIRNIRRNAKETLDKMVKDSEAGEDEVRRAEKELDDLTQKHVAKIDELLKHKEAELLE 184


>gi|126662970|ref|ZP_01733968.1| ribosome recycling factor (ribosome releasing factor)
           [Flavobacteria bacterium BAL38]
 gi|126624628|gb|EAZ95318.1| ribosome recycling factor (ribosome releasing factor)
           [Flavobacteria bacterium BAL38]
          Length = 187

 Score =  140 bits (353), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 110/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K+ M  +++ L+K+ + +R G+ SP ML  V V+ YGS  PL+QVAN+   + R L
Sbjct: 9   LDSAKEAMIGSVAHLEKEFLNIRAGKASPQMLGGVFVDYYGSQTPLSQVANINAADARTL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ W+K M+  +E+ I  +NLGLNP+  G  + I +P  TEERR  LVK A + AE +K
Sbjct: 69  TVTPWEKNMLHPIEKAIMIANLGLNPMNNGDNIIINIPALTEERRRDLVKQAKSEAEDAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I +RN R+D    +KK  K G A ED+    E D+QK+TDS IK I+     K+ EIM
Sbjct: 129 IGIRNHRKDANSDIKKEEKEGTA-EDICKKAEEDVQKLTDSFIKKIEELLAVKEAEIM 185


>gi|256419436|ref|YP_003120089.1| ribosome recycling factor [Chitinophaga pinensis DSM 2588]
 gi|256034344|gb|ACU57888.1| ribosome recycling factor [Chitinophaga pinensis DSM 2588]
          Length = 187

 Score =  140 bits (353), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 108/171 (63%), Gaps = 1/171 (0%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   I  L+ ++  +R G+ +P +LD + V+ YGS  PL QVAN+TV + R L V  W+K
Sbjct: 16  MRKAIGHLESELTKIRAGKANPQILDGITVDYYGSPTPLAQVANITVADARTLTVQPWEK 75

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M+  +ER I  SN+G+NP  +G ++R+ +P  TEERR   VK A    E++KI++RNIR
Sbjct: 76  NMLQPIERAIIASNIGINPQNDGIIIRMFLPPLTEERRKEFVKRALNEGEQAKIAIRNIR 135

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD ++ +KK +K G  SED     E D+Q +T+  I+ +D    +K+KEIM
Sbjct: 136 RDAIEGIKKLQKDG-LSEDTAKDAEADVQNLTNKYIELVDKHTAQKEKEIM 185


>gi|50084551|ref|YP_046061.1| ribosome recycling factor [Acinetobacter sp. ADP1]
 gi|60390252|sp|Q6FCH2|RRF_ACIAD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|49530527|emb|CAG68239.1| ribosome releasing factor [Acinetobacter sp. ADP1]
          Length = 184

 Score =  140 bits (353), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 109/172 (63%), Gaps = 1/172 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV + + R LVV  ++
Sbjct: 12  RMQKTLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGIEDSRTLVVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA + AE +K+++RNI
Sbjct: 72  RTMVSAIDKAIRESDLGLNPIT-ADSIRVPLPALTEETRRDMQKVARSEAENAKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  LK   K  + SED      +DIQKITD  +  +D     K+ E+M
Sbjct: 131 RRDVLGDLKSLLKDKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELM 182


>gi|187917999|ref|YP_001883562.1| ribosome recycling factor [Borrelia hermsii DAH]
 gi|238689276|sp|B2RZI6|RRF_BORHD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119860847|gb|AAX16642.1| ribosome recycling factor [Borrelia hermsii DAH]
          Length = 184

 Score =  140 bits (353), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 112/177 (63%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  +LRTGR+S ++ D V V+ YG   PL +VAN+++ E R++V+ 
Sbjct: 8   LDEKMDRVLLSLDSEYKSLRTGRISSALFDKVLVDYYGEKTPLTRVANISIPEARLIVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK +++ +E+ I  S+L +NP  +G VLRI VP  T ERR  +VK A   AE+ K++ 
Sbjct: 68  PWDKSLLSKIEQAILSSDLSMNPSSDGSVLRIKVPVLTVERRKEIVKQAKKIAEEYKVAA 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RN+R++  +  KK  K  + +ED +  + +DIQ+ T+S IK ID  F+ K KEIM F
Sbjct: 128 RNVRQELNNKAKKQEKDSQITEDDLRRILDDIQRDTNSYIKKIDEIFDLKTKEIMEF 184


>gi|307546391|ref|YP_003898870.1| ribosome recycling factor [Halomonas elongata DSM 2581]
 gi|307218415|emb|CBV43685.1| K02838 ribosome recycling factor [Halomonas elongata DSM 2581]
          Length = 185

 Score =  140 bits (353), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 103/174 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  L  +   +RTGR  PS+LD V VE YGS +P+NQVA+V V + R L V  W+
Sbjct: 12  RMKKSLEALHNNFNKIRTGRAHPSILDAVTVEYYGSQMPINQVASVNVEDARTLTVVPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MV  VE+ I  + LGLNP   G V+R+P+P  TEE R   +K A   AE ++++VRN+
Sbjct: 72  QSMVPKVEKAIMTAELGLNPASAGNVIRVPMPMLTEETRKGYIKQARQEAENTRVAVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD    +K   K    +ED     E++IQK+TD  +  ID   E K+ ++M  
Sbjct: 132 RRDANHEIKTLLKDKDITEDDQRQGEDEIQKLTDKIVGEIDKALESKEHDLMQV 185


>gi|313124038|ref|YP_004034297.1| ribosome-recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280601|gb|ADQ61320.1| Ribosome-recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 185

 Score =  140 bits (353), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 108/175 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K  M  +I   + ++ T+R G  + S+LD V VE YG   PL Q+A +T+ EPR+LV++ 
Sbjct: 10  KSNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLVITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +E  I  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++KI+VR
Sbjct: 70  YDKTSLNDIEHAILASDLGLTPANDGNVIRLVIPQLTGERRQEIAKEVGKLAEEAKIAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+R++ M  LKK  K G+ +ED    LE ++QKITD + K ID   + K+KEI  
Sbjct: 130 NVRQEAMKALKKQEKDGEITEDEERRLEKEVQKITDESTKKIDQMADNKRKEITQ 184


>gi|170077573|ref|YP_001734211.1| ribosome recycling factor [Synechococcus sp. PCC 7002]
 gi|238689043|sp|B1XJ13|RRF_SYNP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169885242|gb|ACA98955.1| ribosome recycling factor [Synechococcus sp. PCC 7002]
          Length = 182

 Score =  140 bits (353), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 111/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  +++ M  TI   ++   TLRTGR S S+LD + VE YG+  PL  +A+++  +   +
Sbjct: 3   LSELRENMQKTIEATQRSFNTLRTGRASASLLDRITVEYYGAETPLKSLASISTPDSSTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  ++ VER I  S+LGL P  +G  +R+ +P  T+ERR  LVK A   AE+ K
Sbjct: 63  MIQPFDRGSLSDVERAISMSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD +D ++K  K+   SED   SL++DIQK+TD     ID   + K+K+IM
Sbjct: 123 VALRNIRRDAIDDVRKQEKNSDISEDESRSLQDDIQKVTDEFTTKIDDLLKIKEKDIM 180


>gi|325673456|ref|ZP_08153147.1| ribosome recycling factor [Rhodococcus equi ATCC 33707]
 gi|325555477|gb|EGD25148.1| ribosome recycling factor [Rhodococcus equi ATCC 33707]
          Length = 185

 Score =  140 bits (352), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 107/175 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   I+  K D+ ++RTGR +P M + V VE YGS  P+ Q+A++ V E RM+++  
Sbjct: 10  EEKMEKAITVAKDDLGSIRTGRANPGMFNRVVVEYYGSMTPITQLASINVPEARMVIIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++   +  +E  I  S+LG+NP  +G ++RI VP+ TEERR   VK A +  E +K+++R
Sbjct: 70  YEASQLGPIENAIRNSDLGVNPSNDGSIIRISVPQLTEERRREFVKQAKSKGEDAKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+RR  MD L + +K G+A ED V   E ++ K T   +  ID   + K+ E+M 
Sbjct: 130 NVRRKTMDELSRIQKDGEAGEDEVGRAEKELDKTTSRYVSQIDELVKHKEAELME 184


>gi|46447510|ref|YP_008875.1| putative ribosome recycling factor (ribosome releasing factor)
           [Candidatus Protochlamydia amoebophila UWE25]
 gi|60390257|sp|Q6M9Z9|RRF_PARUW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|46401151|emb|CAF24600.1| putative ribosome recycling factor (ribosome releasing factor)
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 183

 Score =  140 bits (352), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 109/173 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K +M   I  LK D+  +RTGR +P M++ V +E YGS + L  VA+++  E R L+++ 
Sbjct: 8   KTKMITAIEHLKNDLKNIRTGRANPGMVEHVMIEVYGSPMRLKDVASISAPEARQLLITP 67

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D +   S+ +GI ++NLGL PIV+   +RI +P  TEE R  + K+ H   EK+K+S+R
Sbjct: 68  FDPQNAGSIGKGIEKANLGLMPIVDAHSVRIKIPPMTEEIRKKMAKICHEEKEKTKVSIR 127

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           NIRRD  +  +K +  G  +ED++  LE +IQ++TD   K  D   E+K+KEI
Sbjct: 128 NIRRDANELARKQKSEGIIAEDVLKKLEKNIQELTDKFCKEADEIAEKKEKEI 180


>gi|313901478|ref|ZP_07834931.1| ribosome recycling factor [Thermaerobacter subterraneus DSM 13965]
 gi|313468252|gb|EFR63713.1| ribosome recycling factor [Thermaerobacter subterraneus DSM 13965]
          Length = 184

 Score =  140 bits (352), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 112/177 (63%), Gaps = 1/177 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++RM   +   ++++  +R GR +P++L+ ++V+ YG+ +P++Q+A +T  EPRML
Sbjct: 6   LRETRERMEARVENFRRELAGVRAGRATPALLEKIRVDYYGTPMPIHQLATITAPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WDK ++  +ER I +S+LG+NP  +GQV+RI +P  TEE R  LVK     AE+ +
Sbjct: 66  VVQPWDKGVMGEIERAIAKSDLGVNPSSDGQVIRIVLPPLTEETRNELVKRVRKMAEEER 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VRN+RR   + LK     G  SED +   +  +Q++TD  I  ID     K+KEI
Sbjct: 126 VAVRNLRRQANEDLKDLEDEG-FSEDEIRRAQEKVQELTDRIIARIDELLAAKEKEI 181


>gi|224066503|ref|XP_002302112.1| predicted protein [Populus trichocarpa]
 gi|222843838|gb|EEE81385.1| predicted protein [Populus trichocarpa]
          Length = 286

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 114/174 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM  TI  ++ +  ++RTGR +PSMLD ++VE YG+ V L  +A ++  +   L+V  
Sbjct: 111 KGRMEKTIDTMRANFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQP 170

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  + ++E+ I  S+LGL P  +G+V+R+ +P+ T ERR  L K+    AE+ K+++R
Sbjct: 171 YDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALR 230

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRRD +   +K  K  K SED V  L +D+QK+TD  +K +++ F++K+KE++
Sbjct: 231 NIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLENIFKQKEKELL 284


>gi|194334661|ref|YP_002016521.1| ribosome recycling factor [Prosthecochloris aestuarii DSM 271]
 gi|238693307|sp|B4S4H8|RRF_PROA2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|194312479|gb|ACF46874.1| ribosome recycling factor [Prosthecochloris aestuarii DSM 271]
          Length = 186

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 107/172 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I   + ++ ++RTG+ + ++LD VKV+AYG  +PL QV NV V +   L+V VWD
Sbjct: 13  KMKKSIESFQHEIASVRTGKATTALLDRVKVDAYGQQMPLKQVGNVGVQDAHTLMVQVWD 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K MVA+ E+ I ++NLGLNP  EGQ +R+ +P  TEERR   VK+   Y+E SK+++RN+
Sbjct: 73  KSMVAATEKAIRDANLGLNPAAEGQSIRVSIPPLTEERRKEYVKLTRKYSEDSKVALRNL 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+ +  L K  K  + SED  +  + D   +     K I     +K+KEIM
Sbjct: 133 RREILHALDKLEKDKQISEDEKSRGKKDADDLVHKYEKRILDIVGQKEKEIM 184


>gi|310823274|ref|YP_003955632.1| ribosome-recycling factor [Stigmatella aurantiaca DW4/3-1]
 gi|309396346|gb|ADO73805.1| Ribosome-recycling factor [Stigmatella aurantiaca DW4/3-1]
          Length = 186

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+ +K R+  T+  LK+++  +RTGR S ++LD V+V+ YG+  PL  VA+V   EPR++
Sbjct: 7   LKELKGRIDKTLDDLKRELAKVRTGRASTAILDGVRVDYYGTPTPLAGVASVNAPEPRLI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK  +  +E+ + E+NLG+NP+ +G+++R+P P  TEERR  + K   +  E+ K
Sbjct: 67  TIKPFDKSSLKEIEKALREANLGINPMNDGEMIRLPFPPLTEERRKDIAKQVKSKGEEHK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD  + LK+  K+   +ED        +QK TD+ +  +DS    K+KE+M
Sbjct: 127 VAIRNIRRDANEALKEKLKAKTITEDDNKRTSEKVQKETDAGVAQVDSIIAAKEKEVM 184


>gi|85859433|ref|YP_461635.1| ribosome recycling factor [Syntrophus aciditrophicus SB]
 gi|123516615|sp|Q2LTQ4|RRF_SYNAS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|85722524|gb|ABC77467.1| ribosome recycling factor [Syntrophus aciditrophicus SB]
          Length = 185

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 109/177 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +K  M   +  L+K    +RTGR S S+LD +K + YG+  PLNQVA ++V E R +++S
Sbjct: 9   LKQNMEKGLQALEKSFNKVRTGRASISLLDGIKADYYGTPTPLNQVATLSVPESRQILIS 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WD   + ++E+ I +S+LGL P  +G+V+RI +P  TE RR  LVKV    AE+ K+ +
Sbjct: 69  PWDTSALNAIEKAIQKSDLGLVPNNDGKVIRISIPPLTEARRKELVKVVRKMAEECKVKL 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RN RRD  +  K  +K+   SED +   ++ +QK+TDS I+  +    +K+KEIM  
Sbjct: 129 RNARRDANEEFKSMKKNNDISEDQMHDYQDQVQKMTDSYIEKSEDILVQKEKEIMEI 185


>gi|160893344|ref|ZP_02074131.1| hypothetical protein CLOL250_00893 [Clostridium sp. L2-50]
 gi|156865036|gb|EDO58467.1| hypothetical protein CLOL250_00893 [Clostridium sp. L2-50]
          Length = 181

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  T+  L+ +  T+R GR +P++L+ +KVE YG   P+ Q+AN+TV E R L
Sbjct: 2   LTQYEEKMTKTVENLEGEYATIRAGRANPNILNKIKVEYYGVPTPMQQLANITVPEARTL 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+  +V ++E+ I  S+LGL P  +G+ + +  PE TEERR  +VK      E +K
Sbjct: 62  MIAPWEPSLVKAIEKAILNSDLGLTPNNDGKNIILNFPELTEERRKEIVKDIKKKGENAK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+RRD  D +KK  K+G  SED + + E+ IQK+TD  +  ID   E+K  EI+
Sbjct: 122 VAIRNVRRDANDAIKKMEKAGDISEDELKTNEDKIQKMTDKYVGLIDKAIEKKSTEIL 179


>gi|148285160|ref|YP_001249250.1| ribosome recycling factor [Orientia tsutsugamushi str. Boryong]
 gi|166230811|sp|A5CFN3|RRF_ORITB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146740599|emb|CAM81253.1| ribosome recycling factor [Orientia tsutsugamushi str. Boryong]
          Length = 187

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 114/175 (65%), Gaps = 1/175 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +  L  D+  LR G+ S   LD V+VEAY S VP+ QVA ++V + + ++V VWD
Sbjct: 13  KMNGALQVLDADLKGLRVGQASAYFLDPVQVEAYNSRVPILQVATISVSDTKTILVQVWD 72

Query: 73  KEMVASVERGIHESNLGLNPIVE-GQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           K +V +V++ I E+NLG++ I +  Q++R+ +P  +EERR  LVK+AH Y EKSKI VRN
Sbjct: 73  KSLVKAVKKAIMEANLGVSIISDDNQIIRLQLPIPSEERRKELVKIAHKYQEKSKIIVRN 132

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IRRDG++ +K+  ++ + S+D       +IQ++TD     ID   + K+++I++ 
Sbjct: 133 IRRDGIELIKQMEQNTECSKDEAHIYSKEIQELTDKYCDKIDKIIKLKEQDIINL 187


>gi|297566374|ref|YP_003685346.1| ribosome recycling factor [Meiothermus silvanus DSM 9946]
 gi|296850823|gb|ADH63838.1| ribosome recycling factor [Meiothermus silvanus DSM 9946]
          Length = 185

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 108/174 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++ M   +  L+  +  LRTGR +P++L  ++V+ YGS +P+ Q+  +T  + R LV+  
Sbjct: 10  RNHMQKALDALEHHLSGLRTGRANPAILKSIRVDYYGSLMPIEQLGTITAPDARTLVIQS 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD   + S+E+ I +S+LGLNP  +G  L I +P  TEERR  LVK    YAE+++++VR
Sbjct: 70  WDAGALKSIEKAIRDSDLGLNPNNKGDSLFISIPPLTEERRRELVKAVKHYAEEARVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N RR+ +D  KK  K    SED +   E +IQKITD  I  +DS  E+K+ EI+
Sbjct: 130 NARREAVDKAKKLGKEQHLSEDDIKRAEAEIQKITDEFIGKVDSALEKKEHEIL 183


>gi|119357866|ref|YP_912510.1| ribosome recycling factor [Chlorobium phaeobacteroides DSM 266]
 gi|166230777|sp|A1BI59|RRF_CHLPD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119355215|gb|ABL66086.1| ribosome recycling factor [Chlorobium phaeobacteroides DSM 266]
          Length = 186

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 109/177 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  + +M  TI   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV NV V++   L+
Sbjct: 8   QRTEPKMKKTIEAFQHEIASIRTGKATTALLDRVKVEAYGQQMPLKQVGNVGVMDVHTLM 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV++ ER I ++NLGLNP  +GQ +R+ +P  TEERR   VK+   + E SK+
Sbjct: 68  VQVWDKSMVSATERAIRDANLGLNPAADGQSIRVSIPPLTEERRKEFVKLTKKFGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RN+RRD +  ++K  K    SED     + +  ++     K ++     K+KEIM
Sbjct: 128 SLRNLRRDMIHEIEKLEKEKAISEDDKNKGKKEADEMLHKFEKQLNDLIVLKEKEIM 184


>gi|325983649|ref|YP_004296051.1| ribosome recycling factor [Nitrosomonas sp. AL212]
 gi|325533168|gb|ADZ27889.1| ribosome recycling factor [Nitrosomonas sp. AL212]
          Length = 185

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 108/172 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  LK D+  +R+GR     LD + V+ YG+  PL+QVAN+ +++ R + V  W+
Sbjct: 12  KMQKSLEALKVDLSKVRSGRAHAGFLDHITVDYYGTQTPLSQVANINLIDARTIGVIPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+M   +E+ I ES+LGLNP+  G+ +R+P+P  TEERR  L+KV    AE  +I++RNI
Sbjct: 72  KKMGNVIEKAIRESDLGLNPMPVGETIRVPMPALTEERRRDLIKVVKQEAENVRIAMRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD   HLK   KS + SED     +++IQK+TD  I  ID     K+ E+M
Sbjct: 132 RRDANTHLKDLLKSKEISEDDERRGQDEIQKLTDRYITEIDKILHIKETELM 183


>gi|189184500|ref|YP_001938285.1| ribosome recycling factor [Orientia tsutsugamushi str. Ikeda]
 gi|238692022|sp|B3CUK4|RRF_ORITI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189181271|dbj|BAG41051.1| ribosome recycling factor [Orientia tsutsugamushi str. Ikeda]
          Length = 187

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 114/175 (65%), Gaps = 1/175 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +  L  D+  LR G+ S   LD V+VEAY S VP+ QVA ++V + + ++V VWD
Sbjct: 13  KMNGALQVLDADLKGLRVGQASAYFLDPVQVEAYNSKVPILQVATISVSDTKTILVQVWD 72

Query: 73  KEMVASVERGIHESNLGLNPIVE-GQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           K +V +V++ I E+NLG++ I +  Q++R+ +P  +EERR  LVK+AH Y EKSKI VRN
Sbjct: 73  KSLVKAVKKAIMEANLGVSIISDDNQIIRLQLPIPSEERRKELVKIAHKYQEKSKIIVRN 132

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IRRDG++ +K+  ++ + S+D       +IQ++TD     ID   + K+++I++ 
Sbjct: 133 IRRDGIELIKQMEQNTECSKDEAHIYSKEIQELTDKYCDKIDKIIKLKEQDIINL 187


>gi|29347659|ref|NP_811162.1| ribosome recycling factor [Bacteroides thetaiotaomicron VPI-5482]
 gi|253572118|ref|ZP_04849522.1| ribosome-recycling factor [Bacteroides sp. 1_1_6]
 gi|34924952|sp|Q8A5J0|RRF_BACTN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29339560|gb|AAO77356.1| ribosome recycling factor (ribosome releasing factor) [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251838298|gb|EES66385.1| ribosome-recycling factor [Bacteroides sp. 1_1_6]
          Length = 186

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 112/178 (62%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA ++  + R +
Sbjct: 8   LDNAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAALSTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M  ++E+ I +S+LG+ P   G+V+RI +P  TEERR  L K   A  E +K
Sbjct: 68  TIKPWDKSMFRAIEKAIIDSDLGIMPENNGEVIRIGIPPLTEERRRQLAKQCKAEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRDG+D LKK+ K G A ED   + E  +QKI D  IK I+    +K KEIM
Sbjct: 128 VSVRNARRDGIDALKKAVKDGLA-EDEQKNAEAKLQKIHDKYIKQIEDMLADKDKEIM 184


>gi|300854491|ref|YP_003779475.1| putative ribosome recycling factor [Clostridium ljungdahlii DSM
           13528]
 gi|300434606|gb|ADK14373.1| predicted ribosome recycling factor [Clostridium ljungdahlii DSM
           13528]
          Length = 185

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 102/154 (66%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +MG TI  LK ++ +++ GR S ++LD ++ E YGS  P+NQ+ N+++ EPR+L +  WD
Sbjct: 12  KMGKTIDALKSELASMKAGRASAALLDRIEAEYYGSMTPINQLGNISIPEPRVLCIQPWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G+V+R+ +PE TEE R  +VK      E SK++VR I
Sbjct: 72  KTALKAIEKAILKSDLGINPSNDGEVIRLVIPELTEETRKDIVKNVKKAGEDSKVAVRAI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           RR+  D++K  +K    SED +   E D+QK TD
Sbjct: 132 RRECNDNIKALKKENDISEDEIKKAEADVQKKTD 165


>gi|89889410|ref|ZP_01200921.1| ribosome recycling factor [Flavobacteria bacterium BBFL7]
 gi|89517683|gb|EAS20339.1| ribosome recycling factor [Flavobacteria bacterium BBFL7]
          Length = 184

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 114/186 (61%), Gaps = 6/186 (3%)

Query: 1   MNQVIDL--QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ ++L     K+ M   I  L+K ++ +R G+ SP+ML  V V+ YGS  PL QVANV
Sbjct: 1   MNEELELVIDACKEGMDSAIVHLEKQLLNIRAGKASPAMLGSVFVDYYGSQTPLGQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + V+ W+K M+  +E+GI  +NLGLNP+  G+ + I VP  TEERR+ L K +
Sbjct: 61  AAPDARTITVTPWEKGMITEIEKGIMYANLGLNPMNNGESVIINVPALTEERRIDLAKQS 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            +  E++KI VRN R+  M+ LKK       SED++ S E ++Q++T+S I  ID     
Sbjct: 121 KSEGEEAKIGVRNDRKTAMNDLKKL----GLSEDLLKSSEEEVQELTNSYIAKIDKIVAV 176

Query: 179 KKKEIM 184
           K+ EIM
Sbjct: 177 KEAEIM 182


>gi|304384860|ref|ZP_07367206.1| ribosome recycling factor [Pediococcus acidilactici DSM 20284]
 gi|304329054|gb|EFL96274.1| ribosome recycling factor [Pediococcus acidilactici DSM 20284]
          Length = 186

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 116/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M      L++D+ ++R GR + S+LD V V+ YG+  PLNQ+A++++ EPR+L
Sbjct: 7   LKTAEEKMHKAHQALERDLGSIRAGRANASLLDRVTVDYYGAPTPLNQMASISIPEPRVL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ +  ++LG+NP  +G  +R+ +P+ TEE R  L K   A  EK K
Sbjct: 67  LITPYDKSVLNDIEQALLVADLGINPANDGSAIRLVIPQLTEETRKELAKDVKAEGEKGK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+RR+ M+ LKK+ K+G  ++D    LE   Q ITD  I+ ++     K+KE++
Sbjct: 127 VAIRNVRREAMEALKKAHKNGDYNDDEFHDLEKQAQDITDKAIRKVEEIVANKEKEVL 184


>gi|317056783|ref|YP_004105250.1| ribosome recycling factor [Ruminococcus albus 7]
 gi|315449052|gb|ADU22616.1| ribosome recycling factor [Ruminococcus albus 7]
          Length = 184

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 115/176 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M  +++ +  D   +R GR +P++LD VKV+ YGS  P+NQ+A V+V E R+LV++ 
Sbjct: 9   KEKMEKSVNVMLSDFAAIRAGRANPAVLDKVKVDYYGSPTPVNQMAAVSVAEARILVITP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK  + S+E+ I  S++G+NP  +GQ +R+  P+ TE+RR  +VK      E +K++VR
Sbjct: 69  WDKSTLKSIEKAIQASDIGINPQNDGQTIRLIFPQLTEDRRKEIVKDVKKGGEDTKVAVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +IRRD ++ +K  +K+ + +ED     E  IQKITD  IK ID    EK+KEI+  
Sbjct: 129 SIRRDAIEKIKAKKKNNEITEDEQKDGEEAIQKITDKFIKEIDGHVAEKEKEILSI 184


>gi|253996534|ref|YP_003048598.1| ribosome recycling factor [Methylotenera mobilis JLW8]
 gi|253983213|gb|ACT48071.1| ribosome recycling factor [Methylotenera mobilis JLW8]
          Length = 185

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 106/172 (61%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  LK D+  +RTGR    +LD V VE YGS V +NQVANV + + R + V  ++
Sbjct: 12  KMQKSLEALKNDLAKVRTGRAHVGLLDHVMVEYYGSMVAVNQVANVNLGDARTINVQPYE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+A VE+ I +S+LGLNP   G ++R+P+P  TEERR  L K+     E +K+++RN+
Sbjct: 72  KNMIAKVEKAIRDSDLGLNPATNGDLIRVPMPMLTEERRRDLTKIVRTEGEGAKVAIRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  D LKK  K    SED     ++++QK TD  +  +D   + K+ ++M
Sbjct: 132 RRDANDALKKLVKDKAISEDDERRAQDEVQKSTDKAVAEVDKMLQVKEADLM 183


>gi|298383473|ref|ZP_06993034.1| ribosome recycling factor [Bacteroides sp. 1_1_14]
 gi|298263077|gb|EFI05940.1| ribosome recycling factor [Bacteroides sp. 1_1_14]
          Length = 186

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M   I +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   LDNAQEKMDMAIMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   +  E +K
Sbjct: 68  TIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKSEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRDG+D LKK+ K G A ED   + E  +QKI D  IK I+    +K KEIM
Sbjct: 128 VSVRNARRDGIDALKKAVKDGLA-EDEQKNAEAKLQKIHDKYIKQIEDMLADKDKEIM 184


>gi|325685953|gb|EGD28016.1| ribosome recycling factor [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 185

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 108/175 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K  M  +I   + ++ T+R G  + S+LD V VE YG   PL Q+A +T+ EPR+LV++ 
Sbjct: 10  KSNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLVITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +E  I  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++KI+VR
Sbjct: 70  YDKTSLNDIEHAILASDLGLTPANDGNVIRLVIPQLTGERRQEIAKEVGKLAEEAKIAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+R++ M  LKK  K G+ +ED    LE ++QK+TD + K ID   + K+KEI  
Sbjct: 130 NVRQEAMKALKKQEKDGEITEDEERRLEKEVQKVTDESTKKIDQMADNKRKEITQ 184


>gi|78186236|ref|YP_374279.1| ribosome recycling factor [Chlorobium luteolum DSM 273]
 gi|123583477|sp|Q3B5Z5|RRF_PELLD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78166138|gb|ABB23236.1| ribosome recycling factor [Chlorobium luteolum DSM 273]
          Length = 186

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 106/177 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  + +M   I   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV NV V +   L+
Sbjct: 8   QKSEQKMKKAIEAFQHEIASIRTGKATTALLDRVKVEAYGQTMPLRQVGNVGVSDIHTLL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MVA+ E+ I ++NLGLNP  EGQ +R+ +P  TEERR   VK+   + E SK+
Sbjct: 68  VQVWDKSMVAATEKAIRDANLGLNPAAEGQSIRVSIPPLTEERRKEFVKLTRKFGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RN RRD +  ++K  K    SED     + D   +     K ++    +K+KEIM
Sbjct: 128 SLRNHRRDMIQEIEKLEKEKAISEDDRNRGKKDADDLLHRFEKQVNELIAQKEKEIM 184


>gi|224499896|ref|ZP_03668245.1| ribosome recycling factor [Listeria monocytogenes Finland 1988]
          Length = 172

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 110/164 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IK
Sbjct: 126 VAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIK 169


>gi|330718876|ref|ZP_08313476.1| ribosome recycling factor [Leuconostoc fallax KCTC 3537]
          Length = 181

 Score =  139 bits (351), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 114/180 (63%), Gaps = 3/180 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  + K RM      L++++  +R GR +P++L+ V+VE YG+  PLNQVA++ V E R
Sbjct: 3   FDFSDAKARMQKAQDALQRELAGIRAGRANPALLNRVEVEYYGAMTPLNQVASIQVPEAR 62

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L+V+ +DK  + ++   I+ S+LGLNP  +G  +R+ +P+ TEERR  L K   A  EK
Sbjct: 63  ILLVTPFDKTALDAIVHAINVSDLGLNPASDGNAIRLVIPQLTEERRKELSKDVKAEGEK 122

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+++RNIRRD MD +K   K    +ED +   E + QK+TD  +K ID    EK++E++
Sbjct: 123 AKVAIRNIRRDVMDSIK---KDDALNEDDMHKAETEAQKLTDENVKAIDKIAAEKEEELL 179


>gi|169633330|ref|YP_001707066.1| ribosome recycling factor [Acinetobacter baumannii SDF]
 gi|238688138|sp|B0VMU5|RRF_ACIBS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169152122|emb|CAP01021.1| ribosome releasing factor [Acinetobacter baumannii]
          Length = 184

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 109/173 (63%), Gaps = 1/173 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+V  ++
Sbjct: 12  RMLKTLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLIVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MVA++++ I ES+LGLNPI     +R+P+P  TEE R  + K+A + AE +K+++RNI
Sbjct: 72  RTMVAAIDKAIRESDLGLNPIT-ADSIRVPLPALTEETRRDMQKIARSEAENAKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M 
Sbjct: 131 RRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELMR 183


>gi|326794438|ref|YP_004312258.1| ribosome-recycling factor [Marinomonas mediterranea MMB-1]
 gi|326545202|gb|ADZ90422.1| Ribosome-recycling factor [Marinomonas mediterranea MMB-1]
          Length = 185

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM   ++ ++     +RTGR  PS+LD +KV  YGS  PL+QVAN+TV + R L
Sbjct: 6   LKDAEERMSKAVNSVEVSFNKIRTGRAHPSLLDPIKVNYYGSPTPLSQVANITVEDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S W+  +V  +E+ I +S+LGLNP   G ++RIP+P  TEE R    K A + AE  +
Sbjct: 66  GISPWEGNLVPEIEKAIMKSDLGLNPSTTGNLIRIPMPALTEETRGNYAKQARSEAENGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD   +LK   K  + SED     ++ +QK+TD  +  ++     K+K++M
Sbjct: 126 IAIRNIRRDANGNLKDLTKEKEISEDEERRGQDQVQKLTDKYVAKVEERLAAKEKDLM 183


>gi|291277175|ref|YP_003516947.1| ribosome recycling factor [Helicobacter mustelae 12198]
 gi|290964369|emb|CBG40219.1| ribosome recycling factor [Helicobacter mustelae 12198]
          Length = 185

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 113/184 (61%), Gaps = 1/184 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M Q I  Q+ K  M  +I  LK+D +TLR+G+VS ++LD VKV+ YG+  PLNQV +V  
Sbjct: 1   MTQEI-FQHTKTHMDKSIDALKRDFLTLRSGKVSVNILDNVKVDYYGTPTPLNQVGSVIA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   ++++ W+K ++  +ER I E+N+G+NP  +G+ +++  P  T+E+R  + K   A
Sbjct: 60  QDATTILITPWEKNLLKDIERAIQEANIGVNPNNDGETIKLFFPPMTQEQRKEIAKDTKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+KI++RNIR+D  + +KK  K    +ED      + IQK TD   K ID   + K+
Sbjct: 120 MGEKAKIAIRNIRQDSNNQIKKLEKDKSITEDESKKAHDTIQKYTDEYAKKIDEMVKHKE 179

Query: 181 KEIM 184
            E+M
Sbjct: 180 DEVM 183


>gi|15610019|ref|NP_217398.1| ribosome recycling factor [Mycobacterium tuberculosis H37Rv]
 gi|15842423|ref|NP_337460.1| ribosome recycling factor [Mycobacterium tuberculosis CDC1551]
 gi|31794058|ref|NP_856551.1| ribosome recycling factor [Mycobacterium bovis AF2122/97]
 gi|148662726|ref|YP_001284249.1| ribosome recycling factor [Mycobacterium tuberculosis H37Ra]
 gi|148824071|ref|YP_001288825.1| ribosome recycling factor [Mycobacterium tuberculosis F11]
 gi|167969509|ref|ZP_02551786.1| ribosome recycling factor [Mycobacterium tuberculosis H37Ra]
 gi|215404856|ref|ZP_03417037.1| ribosome recycling factor [Mycobacterium tuberculosis 02_1987]
 gi|215412723|ref|ZP_03421435.1| ribosome recycling factor [Mycobacterium tuberculosis 94_M4241A]
 gi|215428323|ref|ZP_03426242.1| ribosome recycling factor [Mycobacterium tuberculosis T92]
 gi|215431829|ref|ZP_03429748.1| ribosome recycling factor [Mycobacterium tuberculosis EAS054]
 gi|215447144|ref|ZP_03433896.1| ribosome recycling factor [Mycobacterium tuberculosis T85]
 gi|218754634|ref|ZP_03533430.1| ribosome recycling factor [Mycobacterium tuberculosis GM 1503]
 gi|219558903|ref|ZP_03537979.1| ribosome recycling factor [Mycobacterium tuberculosis T17]
 gi|253798030|ref|YP_003031031.1| ribosome recycling factor frr [Mycobacterium tuberculosis KZN 1435]
 gi|254232977|ref|ZP_04926304.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis C]
 gi|254365523|ref|ZP_04981568.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254551951|ref|ZP_05142398.1| ribosome recycling factor [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187900|ref|ZP_05765374.1| ribosome recycling factor [Mycobacterium tuberculosis CPHL_A]
 gi|260202016|ref|ZP_05769507.1| ribosome recycling factor [Mycobacterium tuberculosis T46]
 gi|260206197|ref|ZP_05773688.1| ribosome recycling factor [Mycobacterium tuberculosis K85]
 gi|289444437|ref|ZP_06434181.1| ribosome recycling factor [Mycobacterium tuberculosis T46]
 gi|289448548|ref|ZP_06438292.1| ribosome recycling factor frr [Mycobacterium tuberculosis CPHL_A]
 gi|289553329|ref|ZP_06442539.1| ribosome recycling factor frr [Mycobacterium tuberculosis KZN 605]
 gi|289571072|ref|ZP_06451299.1| ribosome recycling factor frr [Mycobacterium tuberculosis T17]
 gi|289575587|ref|ZP_06455814.1| ribosome recycling factor frr [Mycobacterium tuberculosis K85]
 gi|289746681|ref|ZP_06506059.1| ribosome recycling factor frr [Mycobacterium tuberculosis 02_1987]
 gi|289751547|ref|ZP_06510925.1| ribosome recycling factor frr [Mycobacterium tuberculosis T92]
 gi|289754994|ref|ZP_06514372.1| ribosome recycling factor frr [Mycobacterium tuberculosis EAS054]
 gi|289759003|ref|ZP_06518381.1| ribosome releasing factor [Mycobacterium tuberculosis T85]
 gi|289763059|ref|ZP_06522437.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis GM 1503]
 gi|294994025|ref|ZP_06799716.1| ribosome recycling factor [Mycobacterium tuberculosis 210]
 gi|297635498|ref|ZP_06953278.1| ribosome recycling factor [Mycobacterium tuberculosis KZN 4207]
 gi|297732497|ref|ZP_06961615.1| ribosome recycling factor [Mycobacterium tuberculosis KZN R506]
 gi|298526351|ref|ZP_07013760.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis 94_M4241A]
 gi|306777168|ref|ZP_07415505.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu001]
 gi|306781075|ref|ZP_07419412.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu002]
 gi|306785714|ref|ZP_07424036.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu003]
 gi|306789754|ref|ZP_07428076.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu004]
 gi|306794568|ref|ZP_07432870.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu005]
 gi|306798809|ref|ZP_07437111.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu006]
 gi|306804656|ref|ZP_07441324.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu008]
 gi|306808849|ref|ZP_07445517.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu007]
 gi|306968949|ref|ZP_07481610.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu009]
 gi|306973285|ref|ZP_07485946.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu010]
 gi|307080993|ref|ZP_07490163.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu011]
 gi|307085590|ref|ZP_07494703.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu012]
 gi|313659830|ref|ZP_07816710.1| ribosome recycling factor [Mycobacterium tuberculosis KZN V2475]
 gi|54039295|sp|P66735|RRF_MYCBO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|54042003|sp|P66734|RRF_MYCTU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230804|sp|A5U6N7|RRF_MYCTA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|61680226|pdb|1WQF|A Chain A, Crystal Structure Of Ribosome Recycling Factor From
           Mycobacterium Tuberculosis
 gi|61680227|pdb|1WQG|A Chain A, Crystal Structure Of Ribosome Recycling Factor From
           Mycobacterium Tuberculosis
 gi|61680228|pdb|1WQH|A Chain A, Crystal Structure Of Ribosome Recycling Factor From
           Mycobacterium Tuberculosis
 gi|1403402|emb|CAA98358.1| RIBOSOME RECYCLING FACTOR FRR (RIBOSOME RELEASING FACTOR) (RRF)
           [Mycobacterium tuberculosis H37Rv]
 gi|13882725|gb|AAK47274.1| ribosome recycling factor [Mycobacterium tuberculosis CDC1551]
 gi|31619653|emb|CAD96593.1| RIBOSOME RECYCLING FACTOR FRR (RIBOSOME RELEASING FACTOR) (RRF)
           [Mycobacterium bovis AF2122/97]
 gi|124602036|gb|EAY61046.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis C]
 gi|134151036|gb|EBA43081.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148506878|gb|ABQ74687.1| ribosome releasing factor [Mycobacterium tuberculosis H37Ra]
 gi|148722598|gb|ABR07223.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis F11]
 gi|253319533|gb|ACT24136.1| ribosome recycling factor frr [Mycobacterium tuberculosis KZN 1435]
 gi|289417356|gb|EFD14596.1| ribosome recycling factor [Mycobacterium tuberculosis T46]
 gi|289421506|gb|EFD18707.1| ribosome recycling factor frr [Mycobacterium tuberculosis CPHL_A]
 gi|289437961|gb|EFD20454.1| ribosome recycling factor frr [Mycobacterium tuberculosis KZN 605]
 gi|289540018|gb|EFD44596.1| ribosome recycling factor frr [Mycobacterium tuberculosis K85]
 gi|289544826|gb|EFD48474.1| ribosome recycling factor frr [Mycobacterium tuberculosis T17]
 gi|289687209|gb|EFD54697.1| ribosome recycling factor frr [Mycobacterium tuberculosis 02_1987]
 gi|289692134|gb|EFD59563.1| ribosome recycling factor frr [Mycobacterium tuberculosis T92]
 gi|289695581|gb|EFD63010.1| ribosome recycling factor frr [Mycobacterium tuberculosis EAS054]
 gi|289710565|gb|EFD74581.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis GM 1503]
 gi|289714567|gb|EFD78579.1| ribosome releasing factor [Mycobacterium tuberculosis T85]
 gi|298496145|gb|EFI31439.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis 94_M4241A]
 gi|308214453|gb|EFO73852.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu001]
 gi|308326125|gb|EFP14976.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu002]
 gi|308329628|gb|EFP18479.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu003]
 gi|308333767|gb|EFP22618.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu004]
 gi|308337161|gb|EFP26012.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu005]
 gi|308340971|gb|EFP29822.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu006]
 gi|308344804|gb|EFP33655.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu007]
 gi|308348752|gb|EFP37603.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu008]
 gi|308353453|gb|EFP42304.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu009]
 gi|308357318|gb|EFP46169.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu010]
 gi|308361203|gb|EFP50054.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu011]
 gi|308364898|gb|EFP53749.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu012]
 gi|323718492|gb|EGB27663.1| ribosome recycling factor frr [Mycobacterium tuberculosis CDC1551A]
 gi|326904497|gb|EGE51430.1| ribosome recycling factor frr [Mycobacterium tuberculosis W-148]
 gi|328457804|gb|AEB03227.1| ribosome recycling factor frr [Mycobacterium tuberculosis KZN 4207]
          Length = 185

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D+ T+RTGR +P M   + ++ YG+  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A    E++K
Sbjct: 66  VIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRNIRR  M+ L + RK G+A ED V   E D+ K T   +  ID   + K+ E++
Sbjct: 126 VSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELL 183


>gi|169795682|ref|YP_001713475.1| ribosome recycling factor [Acinetobacter baumannii AYE]
 gi|213158373|ref|YP_002319671.1| ribosome recycling factor [Acinetobacter baumannii AB0057]
 gi|215483169|ref|YP_002325376.1| ribosome recycling factor [Acinetobacter baumannii AB307-0294]
 gi|239501622|ref|ZP_04660932.1| ribosome recycling factor [Acinetobacter baumannii AB900]
 gi|260554744|ref|ZP_05826965.1| ribosome recycling factor [Acinetobacter baumannii ATCC 19606]
 gi|301346282|ref|ZP_07227023.1| ribosome recycling factor [Acinetobacter baumannii AB056]
 gi|301512091|ref|ZP_07237328.1| ribosome recycling factor [Acinetobacter baumannii AB058]
 gi|301595691|ref|ZP_07240699.1| ribosome recycling factor [Acinetobacter baumannii AB059]
 gi|332852500|ref|ZP_08434239.1| ribosome recycling factor [Acinetobacter baumannii 6013150]
 gi|332871296|ref|ZP_08439845.1| ribosome recycling factor [Acinetobacter baumannii 6013113]
 gi|332873908|ref|ZP_08441848.1| ribosome recycling factor [Acinetobacter baumannii 6014059]
 gi|226703248|sp|B7H1U3|RRF_ACIB3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703249|sp|B7I9V2|RRF_ACIB5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238685521|sp|A3M657|RRF_ACIBT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238688040|sp|B0V6F0|RRF_ACIBY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169148609|emb|CAM86475.1| ribosome releasing factor [Acinetobacter baumannii AYE]
 gi|193077567|gb|ABO12401.2| ribosome releasing factor [Acinetobacter baumannii ATCC 17978]
 gi|213057533|gb|ACJ42435.1| ribosome recycling factor [Acinetobacter baumannii AB0057]
 gi|213987944|gb|ACJ58243.1| ribosome recycling factor [Acinetobacter baumannii AB307-0294]
 gi|260411286|gb|EEX04583.1| ribosome recycling factor [Acinetobacter baumannii ATCC 19606]
 gi|322508741|gb|ADX04195.1| ribosome releasing factor [Acinetobacter baumannii 1656-2]
 gi|323518346|gb|ADX92727.1| ribosome recycling factor [Acinetobacter baumannii TCDC-AB0715]
 gi|332729202|gb|EGJ60545.1| ribosome recycling factor [Acinetobacter baumannii 6013150]
 gi|332731580|gb|EGJ62866.1| ribosome recycling factor [Acinetobacter baumannii 6013113]
 gi|332737894|gb|EGJ68781.1| ribosome recycling factor [Acinetobacter baumannii 6014059]
          Length = 184

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 109/172 (63%), Gaps = 1/172 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+V  ++
Sbjct: 12  RMLKTLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLIVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MVA++++ I ES+LGLNPI     +R+P+P  TEE R  + K+A + AE +K+++RNI
Sbjct: 72  RTMVAAIDKAIRESDLGLNPIT-ADSIRVPLPALTEETRRDMQKIARSEAENAKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M
Sbjct: 131 RRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELM 182


>gi|326563741|gb|EGE13992.1| ribosome recycling factor [Moraxella catarrhalis 46P47B1]
          Length = 184

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 109/173 (63%), Gaps = 1/173 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  +I  L+     LRTGR  P +L  V V  YGS  PLNQVA++ V + R L+V  ++
Sbjct: 12  RMQKSIEALEAAFSKLRTGRAHPGILSGVMVSYYGSDTPLNQVASINVEDSRTLLVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MV +V++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE+++ISVRNI
Sbjct: 72  RSMVQAVDKAIREADLGLNPMT-ADVIRVPMPALTEETRRDMQKIARNDAEQTRISVRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD +  +K   K  + SED    + +DIQK+TD  I  IDS  E+K+ E+M 
Sbjct: 131 RRDMLSDIKDLLKDKEISEDDERRVADDIQKLTDKFIATIDSRLEKKESELME 183


>gi|83647914|ref|YP_436349.1| ribosome recycling factor [Hahella chejuensis KCTC 2396]
 gi|123531340|sp|Q2SBQ0|RRF_HAHCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|83635957|gb|ABC31924.1| ribosome recycling factor [Hahella chejuensis KCTC 2396]
          Length = 185

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 105/172 (61%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  L      +RTGR +P++L+ V V  YG+  PL Q+ANV V + R L V+ W+
Sbjct: 12  KMKKSMEALGHAFAKIRTGRANPAILESVMVSYYGTDTPLTQIANVVVEDARTLSVTPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K MV  +E+ I +S+LGLNP   G V+R+P+P  TEE R  LVK A   AE +++++RN+
Sbjct: 72  KNMVPQIEKAILKSDLGLNPSTAGTVIRVPMPALTEETRKELVKTARGEAENTRVAIRNL 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD    +K   K  + SED      +DIQK+TD  I  +D    EK+K++M
Sbjct: 132 RRDANADIKTLLKDKEISEDEEKRGLDDIQKLTDKYIAEVDRVLAEKEKDLM 183


>gi|219127660|ref|XP_002184049.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404280|gb|EEC44227.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 225

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 110/174 (63%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           DRM  ++  ++ ++ ++RTGR S  +LD VKV+ YG   PLNQ+A ++V   + L +  +
Sbjct: 51  DRMAKSVDSVRLNLQSVRTGRASAQILDRVKVDYYGVETPLNQMATISVPSAQQLSIDPY 110

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  + ++E  I ES+LGL    +G ++RI +P  TE+RR  ++K+  +  E+ K++VRN
Sbjct: 111 DKTSLNNIETAIVESDLGLTTNNDGSIIRINIPSMTEDRRKEMLKLCKSIGEEGKVAVRN 170

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IRRDG+D +KK  KS    ED +   ++ +QK+TD  +K ID     K+KE+M 
Sbjct: 171 IRRDGLDTIKKMEKSSDIGEDEMKDGQDTMQKLTDKNVKEIDEVVGAKEKEVMK 224


>gi|167746791|ref|ZP_02418918.1| hypothetical protein ANACAC_01503 [Anaerostipes caccae DSM 14662]
 gi|317471594|ref|ZP_07930938.1| ribosome recycling protein [Anaerostipes sp. 3_2_56FAA]
 gi|167653751|gb|EDR97880.1| hypothetical protein ANACAC_01503 [Anaerostipes caccae DSM 14662]
 gi|316900909|gb|EFV22879.1| ribosome recycling protein [Anaerostipes sp. 3_2_56FAA]
          Length = 181

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 107/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +D+M  +   +  + M +R GR +P +LD V V+ YG   P+ QV NV+V E R +
Sbjct: 2   LKKFEDKMQKSYENMTSEFMAIRAGRANPHVLDKVTVDYYGVPTPIQQVGNVSVPEARTI 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+  ++  +E+ I  S++G+ P  +G  +R+  PE TEERR  L K      E +K
Sbjct: 62  LIQPWEPNLLGEIEKAIMMSDIGITPNNDGSAIRLNFPELTEERRKDLAKDIKKRGETTK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD  D LKK  K+ + ++D +   E+++QK+TD  IK ID   E K KEIM
Sbjct: 122 VAVRNIRRDANDELKKMNKANELNDDQLKDQESEVQKLTDVYIKKIDDAVEAKSKEIM 179


>gi|260654918|ref|ZP_05860406.1| ribosome recycling factor [Jonquetella anthropi E3_33 E1]
 gi|260630420|gb|EEX48614.1| ribosome recycling factor [Jonquetella anthropi E3_33 E1]
          Length = 183

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 112/177 (63%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K  M   I  +  + + +RTGR  P ++  VK + YG+  PL Q+A V+VL+ R L +
Sbjct: 5   DVKTPMQKVIDHMNGEFLGIRTGRAHPGLVGDVKADYYGTPTPLKQMATVSVLDARTLQI 64

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + +D+  V ++E+ I  +N+G+ P+V+G+V+R+ +PE T ERR  L K      E++KI+
Sbjct: 65  TPYDQTAVKTIEKAILAANIGVTPVVDGKVIRLSMPELTGERRKELCKYVSKLGEEAKIA 124

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RN+RRD  D  KK+  +G+ SED + +  + +QK TDS +  +D   +EK+KE+M 
Sbjct: 125 LRNLRRDANDFYKKAEDAGEISEDQLKTELDVVQKETDSFVSKVDELVKEKEKEVME 181


>gi|300088119|ref|YP_003758641.1| ribosome recycling factor [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527852|gb|ADJ26320.1| ribosome recycling factor [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 186

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +MG +I  L +++  +RTGR S ++++ V+V+  G+  P++ +ANV+V   RML
Sbjct: 7   MQTAEKKMGISIEVLHRELGAIRTGRASTAIIEHVQVDYAGTPTPIHHLANVSVPNARML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD+ M+  +E+ I +S+LGL P  +GQV+R+ +P  ++ERRL L ++     E  K
Sbjct: 67  LIQPWDRTMMGPIEKAIMKSDLGLTPSNDGQVIRLSIPPLSQERRLELTRMVAKRVEDDK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RR+ +DHLKK  K  + S+D     ++ +QK+TDS I   D   ++K +E+++
Sbjct: 127 VAIRNLRREALDHLKKMEKDKELSQDESRRAQDALQKLTDSYIAKADELGKQKDEELLN 185


>gi|225166035|ref|ZP_03727781.1| ribosome recycling factor [Opitutaceae bacterium TAV2]
 gi|224799722|gb|EEG18205.1| ribosome recycling factor [Opitutaceae bacterium TAV2]
          Length = 181

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 112/178 (62%), Gaps = 4/178 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + RM   +     +   + TG+ +P+M++ V ++AYGS + +   A +   + RM+
Sbjct: 6   LTEAQTRMKKAVDHTLHEFANIHTGKATPAMVEGVMIDAYGSQMRIKDCAAIMTPDARMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +V ++ +GI  +NLG NP V+G ++R+P+PE + ERRL  VKVA+  AE+ +
Sbjct: 66  VIQPWDKGLVQAISKGIQIANLGFNPNVDGNLIRVPLPEMSRERRLEFVKVANRLAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VRN+RRD ++++KK+    K SED    LE DIQ +TD +I+ ++     K+KE++
Sbjct: 126 VHVRNLRRDTLENVKKA----KLSEDETKRLEKDIQTLTDKSIEEVNKHLAAKEKELL 179


>gi|119477105|ref|ZP_01617341.1| ribosome releasing factor [marine gamma proteobacterium HTCC2143]
 gi|119449468|gb|EAW30706.1| ribosome releasing factor [marine gamma proteobacterium HTCC2143]
          Length = 185

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  T+  L   +  +RTGR  PS+LD ++V  YGS  PL+Q+A + V + R L 
Sbjct: 7   QDAQERMQKTLVALGGALNKIRTGRAHPSILDGLRVNYYGSETPLSQLAAINVEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K +V  VER I +S+LGLNP   G V+RIP+P  TEE R    + A   AE S++
Sbjct: 67  VVPWEKAIVPDVERAIMKSDLGLNPSTAGTVIRIPMPMLTEETRRGFTRQAKKEAEHSRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD +  +K  +K  + SED     ++DIQK+TD  +  I+     K+ ++M  
Sbjct: 127 SIRNIRRDVIADIKDLQKEKEISEDQERKAQDDIQKLTDRFVGEIEVILSAKEADLMEI 185


>gi|291544887|emb|CBL17996.1| ribosome recycling factor [Ruminococcus sp. 18P13]
          Length = 184

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 113/186 (60%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+ I L   +++M   +  L  +  ++R GR +P +LD V V+ YG+  P+NQ+A VTV
Sbjct: 1   MNEHIKLA--EEKMDKALQHLAAEFASIRAGRANPGILDKVTVDYYGTPTPVNQMAAVTV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L++  WD  M+ ++ + +  S++G+ P  +G+V+R+  P+ TE+RR  + K    
Sbjct: 59  SEARILLIQPWDASMIKAINKALLASDIGITPTDDGKVIRLVFPQLTEDRRKEICKSIKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y +++K++VRN+RRD M+  K  +K+ + +ED +   E  IQ ITD      DS   +K+
Sbjct: 119 YGDETKVAVRNVRRDTMEKFKAMKKNSEITEDELKDAEKKIQNITDKFCTQTDSMVSDKE 178

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 179 KEVMSL 184


>gi|34397824|gb|AAQ66885.1| ribosome recycling factor [Porphyromonas gingivalis W83]
          Length = 173

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 106/171 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   + +L + +  +R G+ SP +LD + V  YG+  PL QVA++   + + +VV+ W++
Sbjct: 1   MEKAVEYLDEQLSHVRAGKASPKLLDGIMVMYYGNATPLTQVASINTPDAKTIVVTPWER 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +E+ I +S LG+ P   G+++R+ +P  TEERR  LVK     AE +K+SVRN R
Sbjct: 61  SLIKDIEKAIMDSPLGITPENNGELIRLGLPPLTEERRRQLVKQTKGDAEDAKVSVRNAR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +D +KKS K+    ED+    E ++QK+ D  IK ID  F EK+KEIM
Sbjct: 121 RDAIDAIKKSVKTDGTPEDVAKDAEAEMQKVHDRYIKKIDELFAEKEKEIM 171


>gi|319943823|ref|ZP_08018104.1| ribosome recycling factor [Lautropia mirabilis ATCC 51599]
 gi|319743056|gb|EFV95462.1| ribosome recycling factor [Lautropia mirabilis ATCC 51599]
          Length = 187

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 108/177 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M   I   +  +  +RTGR  P +LD + V+ YG+  P+NQVAN+++ + R L+
Sbjct: 9   KSAEQKMQKGIESFRNALSKIRTGRPHPGVLDHIHVDYYGTSTPINQVANISLADARTLL 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+VW+K M   VE+ I +S+LG+NP   G  +R+P+P  +EERR  +VKV     E +K+
Sbjct: 69  VNVWEKSMAVVVEKAIRDSDLGVNPQSMGTAIRVPMPPLSEERRREIVKVTKHEGEAAKV 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            +R +RR+  D LK + K+ + SED     + DIQK TD  I  ID     K++EIM
Sbjct: 129 VIRGVRREANDELKAAAKAKEISEDDERRGQEDIQKTTDRFIAEIDKLLAAKEQEIM 185


>gi|260591376|ref|ZP_05856834.1| ribosome recycling factor [Prevotella veroralis F0319]
 gi|260536742|gb|EEX19359.1| ribosome recycling factor [Prevotella veroralis F0319]
          Length = 186

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 112/178 (62%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM     +L  ++  +R GR + ++LD V+V++YGS VPLNQVA+V V + R +
Sbjct: 8   LNDASERMEMAAMYLSDELQRIRAGRANVAILDGVRVDSYGSKVPLNQVASVMVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIKPWDKKAIKDIEKAIMDSDVGITPENNGEMIRLNLPQPTEERRRDLVKQCNKIGERAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + +RN+R D  D LKK+ K G  SED     E  +QKI D  IK +D    EK+KEIM
Sbjct: 128 VEIRNVRSDIKDKLKKAIKDG-LSEDNEKDAELSLQKIHDKFIKQVDELLAEKQKEIM 184


>gi|161579528|ref|NP_905986.2| ribosome recycling factor [Porphyromonas gingivalis W83]
 gi|39932026|sp|Q7MTP6|RRF_PORGI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 186

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 106/171 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   + +L + +  +R G+ SP +LD + V  YG+  PL QVA++   + + +VV+ W++
Sbjct: 14  MEKAVEYLDEQLSHVRAGKASPKLLDGIMVMYYGNATPLTQVASINTPDAKTIVVTPWER 73

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +E+ I +S LG+ P   G+++R+ +P  TEERR  LVK     AE +K+SVRN R
Sbjct: 74  SLIKDIEKAIMDSPLGITPENNGELIRLGLPPLTEERRRQLVKQTKGDAEDAKVSVRNAR 133

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +D +KKS K+    ED+    E ++QK+ D  IK ID  F EK+KEIM
Sbjct: 134 RDAIDAIKKSVKTDGTPEDVAKDAEAEMQKVHDRYIKKIDELFAEKEKEIM 184


>gi|86156709|ref|YP_463494.1| ribosome recycling factor [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123499108|sp|Q2IMM1|RRF_ANADE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|85773220|gb|ABC80057.1| ribosome recycling factor [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 188

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++  R+  T+  L+ D+  +RTGR S  +LD V+V+ YG+  PLNQVA ++V E R++
Sbjct: 9   LGDLHGRILKTLDQLRTDLSAVRTGRASLHLLDNVRVDYYGTPTPLNQVATMSVPEARLI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  W+K M+  +E+ I E+NLGLNP+ +  ++R+P+P  TEERR  +VK      E+ K
Sbjct: 69  VVKPWEKSMIPPIEKAIREANLGLNPMSDKDLVRVPIPALTEERRKEIVKQVKHKGEEHK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RR+  + ++ + K G  S D        +QK TD  +K ID     K+K+++  
Sbjct: 129 IAVRNVRREAKELIEVAEKDGDISGDDAEKALEKMQKETDDGVKKIDEIVAAKEKDVLQV 188


>gi|146298338|ref|YP_001192929.1| ribosome recycling factor [Flavobacterium johnsoniae UW101]
 gi|190360242|sp|A5FMF6|RRF_FLAJO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146152756|gb|ABQ03610.1| ribosome recycling factor [Flavobacterium johnsoniae UW101]
          Length = 187

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 117/186 (62%), Gaps = 3/186 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M + ID  L++ ++ M  +I+ L+K+ + +R G+ SP+ML  V V+ YGS  PL+QV+ +
Sbjct: 1   MTEEIDFILESTEESMNGSIAHLEKEFLNIRAGKASPAMLGGVFVDYYGSATPLSQVSKI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +V + R + +  ++K M+ ++E+ I  +N+G NP+  G V+ I VP  TEERR  L K A
Sbjct: 61  SVPDARTITLQPFEKNMLQAIEKAILIANIGFNPMNNGDVIIISVPPLTEERRRDLAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            + AE +KI +RN+R+D    +KK  K G  SED+  S E ++Q +T++ IK ID     
Sbjct: 121 KSEAEDAKIGIRNVRKDANTDIKKLEKEG-TSEDICKSAEEEVQNLTNTYIKKIDELLAA 179

Query: 179 KKKEIM 184
           K+ EIM
Sbjct: 180 KEAEIM 185


>gi|189345927|ref|YP_001942456.1| ribosome recycling factor [Chlorobium limicola DSM 245]
 gi|238692183|sp|B3EFU4|RRF_CHLL2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189340074|gb|ACD89477.1| ribosome recycling factor [Chlorobium limicola DSM 245]
          Length = 186

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 108/177 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I+ +M  TI   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV N+ V++   L+
Sbjct: 8   QKIEPKMKKTIEAFQHEIASIRTGKATTTLLDRVKVEAYGQLMPLKQVGNIGVMDVHTLI 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV++ ER I ++NLGLNP  +GQ +R+ +P  TEERR   VK+   + E SK+
Sbjct: 68  VQVWDKSMVSATERAIRDANLGLNPSADGQNIRVSIPPLTEERRKEFVKLTKKFGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RN+RRD +  ++K  K    SED     + +   +     K +      K+KEIM
Sbjct: 128 SLRNLRRDMIHDIEKLEKDKAISEDDKNRGKKEADDLLHKFEKQLSDLIALKEKEIM 184


>gi|108798972|ref|YP_639169.1| ribosome recycling factor [Mycobacterium sp. MCS]
 gi|119868087|ref|YP_938039.1| ribosome recycling factor [Mycobacterium sp. KMS]
 gi|126434572|ref|YP_001070263.1| ribosome recycling factor [Mycobacterium sp. JLS]
 gi|123070322|sp|Q1BAH1|RRF_MYCSS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230802|sp|A3PXZ5|RRF_MYCSJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230803|sp|A1UEJ1|RRF_MYCSK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|108769391|gb|ABG08113.1| ribosome recycling factor [Mycobacterium sp. MCS]
 gi|119694176|gb|ABL91249.1| ribosome recycling factor [Mycobacterium sp. KMS]
 gi|126234372|gb|ABN97772.1| ribosome recycling factor [Mycobacterium sp. JLS]
          Length = 185

 Score =  139 bits (349), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 111/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  + D+ ++RTGR +P M   + V+ YG+  P+ Q++++ V E RM+
Sbjct: 6   LFDAEEKMEKAVSVARDDLSSIRTGRANPGMFSRINVDYYGATTPITQLSSINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ +P+ TEERR  LVK A A  E +K
Sbjct: 66  VIKPYEANQLRNIEDAIRNSDLGVNPTNDGNIIRVSIPQLTEERRRDLVKQAKAKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRNIRR  M+ L + +K G+A ED V+  E D+ K T +    ID   + K+ E++
Sbjct: 126 VSVRNIRRKAMEELARIKKDGEAGEDEVSRAEKDLDKTTHTYTHQIDELVKHKEGELL 183


>gi|269123002|ref|YP_003305579.1| ribosome recycling factor [Streptobacillus moniliformis DSM 12112]
 gi|268314328|gb|ACZ00702.1| ribosome recycling factor [Streptobacillus moniliformis DSM 12112]
          Length = 185

 Score =  139 bits (349), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 109/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  T+   K     +R GR + SM+D V V+ YG   PLNQV +VT  E R+LV+  WD
Sbjct: 12  KMEKTLESTKVRFSHVRAGRANVSMVDGVLVDYYGQMSPLNQVGSVTAPEARLLVIDPWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++ ++E+ I  +N+G NP  +G+++R+ VPE TE+RR   VKV    AE+ K++ RNI
Sbjct: 72  KSLIPAIEKAILAANIGFNPSNDGRIIRLVVPELTEDRRKEYVKVVKKEAEEGKVAARNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R+D  + ++K  K  + +ED +  +E  IQK+TD  IK+ID    +K+KE++
Sbjct: 132 RKDYNNKVRKMEKDSEITEDDLKHVEEKIQKLTDECIKHIDELLAKKEKELL 183


>gi|284107227|ref|ZP_06386368.1| ribosome recycling factor [Candidatus Poribacteria sp. WGA-A3]
 gi|283829974|gb|EFC34253.1| ribosome recycling factor [Candidatus Poribacteria sp. WGA-A3]
          Length = 186

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 109/174 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +  LKK++ ++R  R S S+ D +KV+ YG+   L QV ++++ + R++++  WD
Sbjct: 13  KMDGALDHLKKELGSIRGSRASLSLFDHIKVDYYGTPTALQQVGSLSMPDSRLIMIQPWD 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              +  +E+ I  S+LGLNP  +G+V+RIP+P  +EERR   VKV   Y E++KI +R I
Sbjct: 73  PTSIKDIEKSILSSDLGLNPSNDGKVIRIPIPALSEERRKEFVKVCRKYGEETKIHIRGI 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR+G D LK+ +K    +ED +   E  IQKI D  IK +D   ++K++EI+  
Sbjct: 133 RREGNDELKRLQKDATITEDDLRRGEATIQKIVDGKIKLVDELLKKKEEEILEI 186


>gi|229495839|ref|ZP_04389565.1| ribosome recycling factor [Porphyromonas endodontalis ATCC 35406]
 gi|229317152|gb|EEN83059.1| ribosome recycling factor [Porphyromonas endodontalis ATCC 35406]
          Length = 187

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 106/177 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  +  M + I +L + +  +R G+ +P +LD + V  YG+  PLNQV  VTV + R +V
Sbjct: 9   QQAETGMQNAIEYLDEKLAHIRAGKANPKILDDIMVSYYGTMTPLNQVGTVTVPDARTIV 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K+++  +E+ I +S LG+ P   G ++RI +P  TEERR  LVK      E++KI
Sbjct: 69  ITPWEKKIIKDIEKAIIDSPLGIMPENNGDLIRIGIPPLTEERRKVLVKQVKGEVEEAKI 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           SVRN RRD +D +KKS K+    ED+    E  IQK+ D  I   D  F  K+KEI+
Sbjct: 129 SVRNARRDAIDAVKKSVKADGTPEDVAKDAEAAIQKLHDKYISRCDELFAAKEKEIL 185


>gi|296112767|ref|YP_003626705.1| ribosome recycling factor [Moraxella catarrhalis RH4]
 gi|295920461|gb|ADG60812.1| ribosome recycling factor [Moraxella catarrhalis RH4]
 gi|326561010|gb|EGE11375.1| ribosome recycling factor [Moraxella catarrhalis 7169]
 gi|326564386|gb|EGE14614.1| ribosome recycling factor [Moraxella catarrhalis 12P80B1]
 gi|326566761|gb|EGE16900.1| ribosome recycling factor [Moraxella catarrhalis 103P14B1]
 gi|326567397|gb|EGE17512.1| ribosome recycling factor [Moraxella catarrhalis BC1]
 gi|326569316|gb|EGE19376.1| ribosome recycling factor [Moraxella catarrhalis BC8]
 gi|326571477|gb|EGE21492.1| ribosome recycling factor [Moraxella catarrhalis BC7]
 gi|326575240|gb|EGE25168.1| ribosome recycling factor [Moraxella catarrhalis CO72]
 gi|326576673|gb|EGE26580.1| ribosome recycling factor [Moraxella catarrhalis 101P30B1]
 gi|326577652|gb|EGE27529.1| ribosome recycling factor [Moraxella catarrhalis O35E]
          Length = 184

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 108/173 (62%), Gaps = 1/173 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  +I  L+     LRTGR  P +L  V V  YGS  PLNQVA++ V + R L+V  ++
Sbjct: 12  RMQKSIEALEAAFSKLRTGRAHPGILSGVMVSYYGSDTPLNQVASINVEDSRTLLVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MV +V++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE+++ISVRNI
Sbjct: 72  RSMVQAVDKAIREADLGLNPMT-ADVIRVPMPALTEETRRDMQKIARNDAEQTRISVRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRD +  +K   K  + SED      +DIQK+TD  I  IDS  E+K+ E+M 
Sbjct: 131 RRDMLSDIKDLLKDKEISEDDERRAADDIQKLTDKFIATIDSRLEKKESELME 183


>gi|168045141|ref|XP_001775037.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673624|gb|EDQ60144.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 264

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 113/172 (65%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  ++   K    T+RTGR +PS+LD V+VE YG++V L  +A +T  +   ++++ +
Sbjct: 90  ERMEKSLEATKASFNTVRTGRATPSLLDRVQVEYYGTNVILKSIAQITTPDGSTILITPF 149

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  + S+E+ + +S++G+ P  +G V+R+ VP+ T +RR  L+K+    +E+ K+++RN
Sbjct: 150 DKSSLTSIEKSLVKSDIGITPNNDGNVIRLNVPQLTADRRKELLKLVSKLSEEGKVAIRN 209

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +RRD +   +K  K  K SED V  L  DIQK+TD  IK ID+ F++K+KE+
Sbjct: 210 VRRDAIKSYEKLEKEKKLSEDNVKDLSGDIQKMTDDYIKKIDALFKQKEKEL 261


>gi|260551688|ref|ZP_05825762.1| ribosome releasing factor [Acinetobacter sp. RUH2624]
 gi|260405431|gb|EEW98925.1| ribosome releasing factor [Acinetobacter sp. RUH2624]
          Length = 184

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 109/172 (63%), Gaps = 1/172 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+V  ++
Sbjct: 12  RMMKTLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLIVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA + AE +K+++RNI
Sbjct: 72  RTMVSAIDKAIRESDLGLNPIT-ADSIRVPLPALTEETRRDMQKVARSEAENAKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M
Sbjct: 131 RRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELM 182


>gi|327441021|dbj|BAK17386.1| ribosome recycling factor [Solibacillus silvestris StLB046]
          Length = 185

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 109/163 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  +I+   +++ ++R G  + S+LD + V+ YGS  P+NQ+A ++V E R+L
Sbjct: 6   LNQAQEKMTKSINAFSRELASIRAGVANASLLDRITVDYYGSPTPINQMAGISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E+ I  S++G+ P  +G V+R+ VP  TEERR  LVK     +E++K
Sbjct: 66  VIQPYDKSILGEIEKAIMRSDIGITPTNDGNVIRLAVPALTEERRKELVKQVKKESEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTI 169
           ++VRN+RRD  D LKK  K+G+ +ED +    +DIQK+TD++I
Sbjct: 126 VAVRNVRRDANDDLKKLEKNGEITEDELRGFNDDIQKLTDNSI 168


>gi|304414212|ref|ZP_07395580.1| ribosome recycling factor [Candidatus Regiella insecticola LSR1]
 gi|304283426|gb|EFL91822.1| ribosome recycling factor [Candidatus Regiella insecticola LSR1]
          Length = 185

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 103/165 (62%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N  +RM   I+  +     +RTGR SPS+LD +KVE YGS  PL Q+A+V   + R L +
Sbjct: 8   NAIERMEKCIATFQTQSSRIRTGRASPSILDGIKVEYYGSATPLRQLASVVAEDARTLAI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
            V+D+ +++ VE+ I  S+LGLNP   G  +RIP+P  TEERR  L+K+    AE S+++
Sbjct: 68  DVFDRNLISVVEKAIIASDLGLNPSSAGSRIRIPLPPLTEERRKELIKIVGQDAENSRVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           +RN+RRD  + +K   K    SED     ++ IQK+TD +IK ID
Sbjct: 128 IRNVRRDANEKIKVLLKDKAISEDEERQAQDKIQKLTDGSIKKID 172


>gi|326336602|ref|ZP_08202771.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691267|gb|EGD33237.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 184

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 115/186 (61%), Gaps = 6/186 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ ID  L++ K+ M  +++ L+K ++ +R G+ SP ML  V V+ YGS  PL+QVANV
Sbjct: 1   MNEEIDFILESTKEAMQGSVAHLEKSLLNIRAGKASPQMLGSVFVDYYGSQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + +  W+K M++++E+ I  +NLG NP+  G+ + I VP  TEERR  LVK A
Sbjct: 61  NTPDSRTISIQPWEKNMLSTIEKAIMVANLGFNPMNNGETIIISVPPLTEERRKELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              +E++KI VRN R++    +KK     + S+D+    E  +QK+TD  IK ID    +
Sbjct: 121 KGESEEAKIGVRNARQEANKEIKKI----EISDDIKKDTEERVQKLTDKYIKQIDEILAK 176

Query: 179 KKKEIM 184
           K+ EI+
Sbjct: 177 KEAEIL 182


>gi|240171728|ref|ZP_04750387.1| ribosome recycling factor [Mycobacterium kansasii ATCC 12478]
          Length = 185

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 111/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  + D+ T+RTGR +P M   + ++ YG++ P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVSVARDDLSTIRTGRANPGMFSRIVIDYYGTNTPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ +P+ TEERR  LVK A    E+++
Sbjct: 66  VIKPYEANQLHAIETAIRNSDLGVNPTNDGTLIRVAIPQLTEERRRELVKQAKHKGEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRNIRR  M+ L + RK G+A ED V   E D+ K T   +  ID   + K+ E++
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDKTTHHYVAQIDELVKHKEGELL 183


>gi|110636998|ref|YP_677205.1| ribosome recycling factor [Cytophaga hutchinsonii ATCC 33406]
 gi|123163830|sp|Q11XK1|RRF_CYTH3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110279679|gb|ABG57865.1| ribosome recycling factor [Cytophaga hutchinsonii ATCC 33406]
          Length = 186

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 107/178 (60%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + KD M   I   + ++  +R G+ SP+M D + V+ YGS  PL QVA V+V EPR +
Sbjct: 8   LDDAKDSMQKAIKHTELELSKIRAGKASPNMFDGIMVDYYGSSTPLAQVATVSVPEPRSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  ++K MV ++E+ I ++N+G NP  +G V+RI VP  TEERR  LVK   A  E  K
Sbjct: 68  TIKAYEKSMVTTIEKAIRDANMGFNPQNDGDVIRINVPPLTEERRRDLVKQTKAEGESGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + +R IR++  D LKK  K G ASED V   E  +Q +T+ T   +++    K+KE+M
Sbjct: 128 VRIRKIRQETNDELKKLLKDG-ASEDEVKRAEEVVQALTNDTSAKLEALIAAKEKELM 184


>gi|300812543|ref|ZP_07092960.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496416|gb|EFK31521.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 185

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 108/175 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K  M  +I   + ++ T+R G  + S+LD V VE YG   PL Q+A +T+ EPR+L+++ 
Sbjct: 10  KSNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQLAGITIPEPRVLMITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +E  I  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++KI+VR
Sbjct: 70  YDKTSLNDIEHAILASDLGLTPANDGNVIRLVIPQLTGERRQEIAKEVGKLAEEAKIAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+R++ M  LKK  K G+ +ED    LE ++QK+TD + K ID   + K+KEI  
Sbjct: 130 NVRQEAMKALKKQEKDGEITEDEERRLEKEVQKVTDESTKKIDQMADNKRKEITQ 184


>gi|188995696|ref|YP_001929948.1| ribosome recycling factor [Porphyromonas gingivalis ATCC 33277]
 gi|238689272|sp|B2RLV6|RRF_PORG3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|188595376|dbj|BAG34351.1| putative ribosome recycling factor [Porphyromonas gingivalis ATCC
           33277]
          Length = 186

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 106/171 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   + +L + +  +R G+ SP +LD + V  YG+  PL QVA++   + + +VV+ W++
Sbjct: 14  MEKAVEYLDEQLSHVRAGKASPKLLDGIMVMYYGNATPLTQVASINTPDAKTIVVTPWER 73

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +E+ I +S LG+ P   G+++R+ +P  TEERR  LVK     AE +K+SVRN R
Sbjct: 74  SLIKDIEKAIMDSPLGITPENNGELIRLGLPPLTEERRRQLVKQIKGDAEDAKVSVRNAR 133

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +D +KKS K+    ED+    E ++QK+ D  IK ID  F EK+KEIM
Sbjct: 134 RDAIDAIKKSVKTDGTPEDVAKDAEAEMQKVHDRYIKKIDELFAEKEKEIM 184


>gi|16331151|ref|NP_441879.1| ribosome recycling factor [Synechocystis sp. PCC 6803]
 gi|3122780|sp|P74456|RRF_SYNY3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|1653645|dbj|BAA18557.1| ribosome releasing factor [Synechocystis sp. PCC 6803]
          Length = 182

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 108/177 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  +KD M  ++   ++   T+RTGR + S+LD + VE YG+  PL  +A +   +   +
Sbjct: 3   LAELKDHMQKSVEATQRSFNTIRTGRANASLLDRITVEYYGAETPLKSLATIGTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   + ++E+ I  S+LGL P  +G+V+R+ +P  T ERR  LVKVA   AE+ K
Sbjct: 63  VIQPFDMGSIGTIEKAISLSDLGLTPNNDGKVIRLNIPPLTAERRKELVKVAGKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD +D ++K  K+   SED    L+ +IQK+TD + K ID     K+K+I
Sbjct: 123 VAIRNIRRDAVDEVRKQEKNSDISEDEARDLQEEIQKLTDQSTKRIDELLAAKEKDI 179


>gi|320109136|ref|YP_004184726.1| ribosome recycling factor [Terriglobus saanensis SP1PR4]
 gi|319927657|gb|ADV84732.1| ribosome recycling factor [Terriglobus saanensis SP1PR4]
          Length = 194

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 108/178 (60%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
            I+ RM  T+   +  ++ +RTGR S  MLD ++V+ YGS +P+NQ+A V+  E  ++VV
Sbjct: 17  QIQTRMNKTVDDFRASLVGVRTGRASVHMLDAIRVDYYGSEMPVNQLATVSTPEATLIVV 76

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S +D  +V  +E+ I  S  G NP+ +G+V+RIP+P  TEERR   VK   +  E  K S
Sbjct: 77  SPFDPTVVPMIEKAIRNSGQGFNPMHDGKVIRIPIPPMTEERRKEAVKQLASVLEDHKTS 136

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRRDG D +KK+ K    S D       + Q +TD+ IK ++  F+ K+KE++  
Sbjct: 137 IRNIRRDGNDTIKKATKDKLISADDEKRAMEETQAMTDTEIKRVEDLFKAKEKEVLSL 194


>gi|145219223|ref|YP_001129932.1| ribosome recycling factor [Prosthecochloris vibrioformis DSM 265]
 gi|189044065|sp|A4SD71|RRF_PROVI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145205387|gb|ABP36430.1| ribosome recycling factor [Chlorobium phaeovibrioides DSM 265]
          Length = 186

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 107/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + ++  +I   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV N+ V +   L
Sbjct: 7   IQKNEAKLKKSIEAFQHEIASIRTGKATTALLDRVKVEAYGQLMPLKQVGNIGVADVHTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V VWDK MV   E+ I ++NLGLNP+ EGQ +R+ +P  TEERR   VK+   + E SK
Sbjct: 67  MVQVWDKGMVGPAEKAIRDANLGLNPVAEGQSIRVSIPPLTEERRKEFVKLTRKFGEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN+RRD +  ++K  K     ED     + D  ++     K I+     K+KEIM
Sbjct: 127 VSLRNLRRDMIQEIEKLEKEKTIGEDEKNRGKKDADELLHKYEKQINELISHKEKEIM 184


>gi|163753790|ref|ZP_02160913.1| ribosome recycling factor (ribosome releasing factor) [Kordia
           algicida OT-1]
 gi|161326004|gb|EDP97330.1| ribosome recycling factor (ribosome releasing factor) [Kordia
           algicida OT-1]
          Length = 184

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 106/174 (60%), Gaps = 4/174 (2%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M   I+ L K ++ +R G+ SP+ML  V V+ YGS  PL+QVANV   + R + +  
Sbjct: 13  KEGMDSAITHLTKQLLGIRAGKASPAMLSSVMVDYYGSQTPLSQVANVNSTDARTITIQP 72

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K M+  +E+GI  +NLG NP+  G+ + I VP  TEERR  LVK + A AE +K+ +R
Sbjct: 73  WEKSMIQEIEKGILVANLGFNPMNNGESVIINVPPLTEERRRELVKQSKAEAEDAKVGIR 132

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R++    +KK       S+D+  + E D+Q +TD  +K ID  F  K+KEIM
Sbjct: 133 NARQEANKEIKKL----DVSDDLKKNAEIDVQALTDDYVKKIDEIFSVKEKEIM 182


>gi|169630269|ref|YP_001703918.1| ribosome recycling factor [Mycobacterium abscessus ATCC 19977]
 gi|238688906|sp|B1MDE3|RRF_MYCA9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169242236|emb|CAM63264.1| Ribosome recycling factor (Ribosome-releasing factor [Mycobacterium
           abscessus]
          Length = 185

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D  T+RTGR +P M   V ++ YG+  P+ QVA + V E RM+
Sbjct: 6   LLDAEEKMEKAVTVARDDFATIRTGRANPGMFQRVVIDYYGTPTPITQVAGINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LGLNP  +G ++R+ +P+ TEERR  LVK A    E +K
Sbjct: 66  VIKPYESNQLKAIEDAIRNSDLGLNPSNDGSIIRVAIPQLTEERRRELVKQAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRR   D L + +K G+A ED V   E D+ K T   +  ID   + K+ E++ 
Sbjct: 126 VTLRNIRRKANDELNRIKKDGEAGEDEVGRAEKDLDKTTAQYVSQIDELVKHKEGELLE 184


>gi|254819038|ref|ZP_05224039.1| ribosome recycling factor [Mycobacterium intracellulare ATCC 13950]
          Length = 185

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 109/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D+ T+RTGR +P M   + ++ YG+  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRIVIDYYGAATPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   V ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A +  E +K
Sbjct: 66  VIKPYEASQVGAIETAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVRNIRR  M+ L + RK G+A ED V   E D+ K T      I+   + K+ E++ 
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDKTTHQYTTQIEELVKHKEGELLE 184


>gi|116514309|ref|YP_813215.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122274959|sp|Q049U5|RRF_LACDB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116093624|gb|ABJ58777.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 185

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 109/175 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K  M  +I   + ++ T+R G  + S+LD V VE YG   PL Q+A +T+ EPR+L+++ 
Sbjct: 10  KRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLMITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +E  I  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++KI+VR
Sbjct: 70  YDKSSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKIAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+R++ M  LKK  K G+ +ED    LE ++QK+TD + K ID   + K+KEI+ 
Sbjct: 130 NVRQEAMKALKKQEKDGEITEDEERRLEKEVQKVTDESTKKIDQMADNKRKEIIQ 184


>gi|208780540|ref|ZP_03247879.1| ribosome recycling factor [Francisella novicida FTG]
 gi|208743515|gb|EDZ89820.1| ribosome recycling factor [Francisella novicida FTG]
          Length = 185

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 108/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  ++  L  D+  +RTGR  P +L  V ++ YG    + Q AN+TVL+ R L
Sbjct: 6   LKDAENRMKKSLEVLADDLAKIRTGRAHPDLLAHVTIDYYGVETTITQAANITVLDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K + + +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+  +  E  +
Sbjct: 66  GITPWEKGLSSKIEKAILTSDLGLNPTNLGDSLRVPMPALNEERRKELVKLVKSETEAGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD    +K+  K  + +ED     E+DIQKITD  I   D+   +K++++M
Sbjct: 126 VSIRNIRRDANGDIKELLKEKEITEDQAKKAEDDIQKITDKMIAQADALAAKKEQDLM 183


>gi|325681407|ref|ZP_08160933.1| ribosome recycling factor [Ruminococcus albus 8]
 gi|324106897|gb|EGC01187.1| ribosome recycling factor [Ruminococcus albus 8]
          Length = 184

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 115/176 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M  +++ +  D   +R GR +P++LD VKVE YG+  P+NQ+A ++V E R+LV++ 
Sbjct: 9   KEKMEKSVNVMLSDFAAIRAGRANPAVLDKVKVEYYGAPTPVNQMAAISVAEARILVITP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK  + S+E+ I  S++G+NP  +GQ +R+  P+ TE+RR  +VK      E  K++VR
Sbjct: 69  WDKSTLKSIEKAIQASDIGINPQNDGQTIRLIFPQLTEDRRKEIVKDVKKGGEDCKVAVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +IRRD ++ +K  +K+ + +ED     E  IQK+TD  +K ID+   EK+KEI+  
Sbjct: 129 SIRRDAIEKIKAKKKNNEITEDEQKDGEEAIQKLTDKFVKEIDAHVAEKEKEILSI 184


>gi|111023540|ref|YP_706512.1| ribosome recycling factor [Rhodococcus jostii RHA1]
 gi|122955102|sp|Q0S282|RRF_RHOSR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110823070|gb|ABG98354.1| ribosome recycling factor [Rhodococcus jostii RHA1]
          Length = 185

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 109/175 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   ++  K D+ ++RTGR +P M + + ++ YG+  P+ Q+A++ V E R++VV  
Sbjct: 10  EEKMEKAVTVAKDDLGSIRTGRANPGMFNRIGIDYYGAFTPITQLASINVPEARLVVVKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++   + ++E  I  S+LG+NP  +G ++RI VP+ TEERR  LVK A +  E +K+SVR
Sbjct: 70  YEASQLGAIETAIRNSDLGVNPSNDGNLIRISVPQLTEERRRELVKQAKSKGEDAKVSVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+RR  MD L + +K G+A ED V   E ++ K T   +  +D   + K+ E++ 
Sbjct: 130 NVRRKAMDELSRIQKDGEAGEDEVGRAEKELDKTTARYVAQVDELVKHKEAELLE 184


>gi|288575126|ref|ZP_06393483.1| ribosome recycling factor [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570867|gb|EFC92424.1| ribosome recycling factor [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 186

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 113/176 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           +++++M   + FLK + + +RTGR  P ++  +KV+ YG+  PL Q+A ++V E R L++
Sbjct: 8   DLEEKMRKAVDFLKGEFVGIRTGRAHPGLVSDIKVDYYGASTPLKQLATISVPEGRSLLI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + +DK ++  +E+ I  S+LG+ P  +GQV+R+ +PE T +RR  L K+ H  +E+++I+
Sbjct: 68  TPFDKTVLKDLEKAILASDLGVTPQNDGQVIRLNLPELTGDRRKELTKMVHKLSEEARIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VRN+RRD  D  KK     +  ED      + IQKITD  I+ ID   ++K++EI+
Sbjct: 128 VRNLRRDCNDFYKKKLNESEIGEDQYHDFLDQIQKITDGYIQEIDKVMKDKEEEIL 183


>gi|225873898|ref|YP_002755357.1| ribosome recycling factor [Acidobacterium capsulatum ATCC 51196]
 gi|225791980|gb|ACO32070.1| ribosome recycling factor [Acidobacterium capsulatum ATCC 51196]
          Length = 195

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 106/178 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q +K RM   +   +  + +LRTGR S  MLD ++V+ YG+  PLNQV  V   + + +V
Sbjct: 17  QQLKTRMDKAVKDFQTQLTSLRTGRASVQMLDQIRVDYYGTPTPLNQVGQVNTPDAQSIV 76

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WD  ++  +E  +  S+LG NP  +G+++RIPVP  TEERR  +VK  +   E+ + 
Sbjct: 77  VQPWDTSILKDIENALRTSDLGFNPQNDGKIIRIPVPPMTEERRREVVKHLNKVLEEHRT 136

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            VRNIRRDG D +KK+ K    SED      +++QK+TD  IK ++    +K+ EIM 
Sbjct: 137 GVRNIRRDGNDAIKKAAKDKLISEDEEKRSLDEMQKLTDEEIKRMEEISRKKEAEIMQ 194


>gi|256379903|ref|YP_003103563.1| ribosome recycling factor [Actinosynnema mirum DSM 43827]
 gi|255924206|gb|ACU39717.1| ribosome recycling factor [Actinosynnema mirum DSM 43827]
          Length = 185

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 111/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K+D+ T+RTGR +P+M   +  E YGS  P+NQ+A++ V EPRM 
Sbjct: 6   LLEAEEKMEKAVTVSKEDLATVRTGRATPAMFSRIVAEYYGSMTPINQLASIAVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +DK  + ++E+ I +S+LG+NP  +G V+R+  P+ +EERR  +VKVA    E +K
Sbjct: 66  VVKPFDKGSMTAIEKAIRDSDLGVNPSNDGTVIRVVFPQLSEERRREMVKVAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RNIRR   + L +  K G+  ED  A  E +++ +T   I  +D   + K+ E++ 
Sbjct: 126 VSIRNIRRKAKEELDRLVKDGEVGEDDGARGEKELENVTHRYIAQVDEAMKNKEAELLE 184


>gi|295111329|emb|CBL28079.1| ribosome recycling factor [Synergistetes bacterium SGP1]
          Length = 185

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 116/180 (64%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+ +++ M   I FL+ + +++RTGR  P ++  +K++ YG+  PL Q+AN+T+ E R 
Sbjct: 5   ELKELQESMDKAIDFLQNEYLSIRTGRAHPGLVSDIKLDYYGTPTPLKQIANITIPESRT 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + ++ +D+  + ++E+ I  +N+G+ P  +G  +R+ +PE T ERR+ L K+    AE +
Sbjct: 65  IQIAPFDRTSLKAIEKAILAANIGMTPQNDGASIRLTLPELTRERRVELTKLLAKKAEDA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++ VRN RRD ++ LKK  K+ + +ED + +L   +Q  TD+ +K +D  ++ K+KE++ 
Sbjct: 125 RVVVRNYRRDAIESLKKQEKASEITEDDLKTLTKGVQDKTDAYVKKVDEIYKAKEKEVLE 184


>gi|297624998|ref|YP_003706432.1| ribosome recycling factor [Truepera radiovictrix DSM 17093]
 gi|297166178|gb|ADI15889.1| ribosome recycling factor [Truepera radiovictrix DSM 17093]
          Length = 184

 Score =  138 bits (347), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 111/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + RM  ++   + ++  +RTGR +P++L+ ++V  YG+  PLNQ+A V+  + R L
Sbjct: 5   LDEARTRMQKSLEAFENNIAAVRTGRANPAILNRIQVNYYGAQTPLNQLATVSSPDARTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK +   +E+ I ES+LG NP   G  L I VP   +ERR ALVK     AE+++
Sbjct: 65  VITPFDKSVAKDIEKAIRESDLGFNPNNRGDSLFISVPPLNDERRRALVKQVKTMAEEAR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RRD  + LK+ RK    ++D +   END+Q++TD  +  ID   + K+++IM
Sbjct: 125 VAVRNVRRDANEELKEMRKENLLTDDELRQGENDVQRLTDEFVGQIDKRVKSKEEDIM 182


>gi|284032627|ref|YP_003382558.1| ribosome recycling factor [Kribbella flavida DSM 17836]
 gi|283811920|gb|ADB33759.1| ribosome recycling factor [Kribbella flavida DSM 17836]
          Length = 185

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 108/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +M   +   K D   +RTGR  PSM   +  + YGS  PL Q+A   V EPR +
Sbjct: 6   LREAEQKMAKAVEVAKNDFAAIRTGRAHPSMFASLLADYYGSPTPLQQLAGFQVPEPRTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A++E+ I +S+LG+NP  +G V+R+ +P+ TEERR   +KVA   AE++K
Sbjct: 66  LISPYDKGAMAAIEKAIRDSDLGVNPGNDGSVIRVVMPQLTEERRKEYIKVARTKAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRR   D + K+ K G+A ED   S E  +  +T   + +ID   + K+ E++
Sbjct: 126 VSMRNIRRHAKDVVDKTVKDGQAGEDEGKSAEKRLDGLTKKYVDSIDELLKHKEAELL 183


>gi|104774221|ref|YP_619201.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123077247|sp|Q1G9N9|RRF_LACDA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|103423302|emb|CAI98143.1| Ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|325126006|gb|ADY85336.1| Ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 185

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 109/175 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K  M  +I   + ++ T+R G  + S+LD V VE YG   PL Q+A +T+ EPR+L+++ 
Sbjct: 10  KRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVLMITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +E  I  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++KI+VR
Sbjct: 70  YDKTSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAKIAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+R++ M  LKK  K G+ +ED    LE ++QK+TD + K ID   + K+KEI+ 
Sbjct: 130 NVRQEAMKALKKQEKDGEITEDEERRLEKEVQKVTDESTKKIDQMADNKRKEIIQ 184


>gi|119952923|ref|YP_945132.1| ribosome recycling factor [Borrelia turicatae 91E135]
 gi|254809494|sp|A1QYS0|RRF_BORT9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119861694|gb|AAX17462.1| ribosome recycling factor [Borrelia turicatae 91E135]
          Length = 184

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 110/174 (63%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L+ +  +LRTGR++ S+ D V V+ YG   PL +VANV++ E R++V+  W
Sbjct: 10  EKMSKVLLSLESEYKSLRTGRINSSLFDKVLVDYYGEKTPLTRVANVSIPEARLIVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK +++ +E+ I  S+L +NP  +G VLRI VP  T ERR  +VK A   AE+ K++ RN
Sbjct: 70  DKSLLSKIEQAILSSDLSMNPSSDGAVLRIKVPVLTVERRKEIVKQAKKIAEEYKVAARN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +R++     KK  K  + +ED +  + +DIQ+ T+S IK ID  F+ K KEIM 
Sbjct: 130 VRQELNSKAKKQEKDSQITEDDLRRILDDIQRDTNSYIKKIDEIFDLKTKEIME 183


>gi|34556750|ref|NP_906565.1| ribosome recycling factor [Wolinella succinogenes DSM 1740]
 gi|39932012|sp|Q7MAD8|RRF_WOLSU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|34482464|emb|CAE09465.1| RIBOSOME RECYCLING FACTOR [Wolinella succinogenes]
          Length = 186

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 116/184 (63%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N+V   Q  K+ M  TI  +K+D  TLRTG+VS ++++ ++V+ YG+  PL+QV +V  
Sbjct: 3   LNEV--YQYTKEHMEKTIDAMKRDFATLRTGKVSTAIVEPIRVDYYGTPTPLSQVGSVIA 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   LV+S W+K ++  +E+ I E+N+G+NP  +G V+++  P  T E+R  + K A A
Sbjct: 61  SDATTLVISPWEKNLLKGIEKAIQEANIGVNPNNDGDVIKLFFPPMTSEQRKEIAKDAKA 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K++VRNIR++  D +KK  K    +ED      +++QK TD  +K ID   + K+
Sbjct: 121 LGEKAKVAVRNIRKESNDKIKKLEKDKLITEDQSKKAHDEVQKYTDDYVKKIDDMVKSKE 180

Query: 181 KEIM 184
           +EI+
Sbjct: 181 EEIL 184


>gi|303232806|ref|ZP_07319491.1| ribosome recycling factor [Atopobium vaginae PB189-T1-4]
 gi|302481292|gb|EFL44367.1| ribosome recycling factor [Atopobium vaginae PB189-T1-4]
          Length = 181

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++  D    K  M   IS LK +   +RTGR +P +LD +KV+ YG   P+ Q+A + V
Sbjct: 1   MSEYTDF--AKSHMTRAISALKTNFSKVRTGRANPQVLDGIKVDYYGQPTPILQLAGIKV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP +L V  WDK  + ++E+ I  S+LG+ P  +G  +R+P P+ T++RRL LVK    
Sbjct: 59  PEPTVLAVEPWDKSSLKAIEKAIEASDLGITPSNDGVTIRLPFPKPTQQRRLELVKECKQ 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE +K+++RN RRD      K+ +  + SED V+  +  IQKITD  I  +D   + K 
Sbjct: 119 YAEDAKVAIRNARRDANG---KAERDEELSEDGVSREKKAIQKITDDFIAQVDELLKTKS 175

Query: 181 KEIMHF 186
            E+M  
Sbjct: 176 AEVMEI 181


>gi|229817669|ref|ZP_04447951.1| hypothetical protein BIFANG_02940 [Bifidobacterium angulatum DSM
           20098]
 gi|229785458|gb|EEP21572.1| hypothetical protein BIFANG_02940 [Bifidobacterium angulatum DSM
           20098]
          Length = 184

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/179 (39%), Positives = 108/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K +M  T+   K++   +RTGR +P++L+ + V+ YG+  P+  VA++ V EPR L
Sbjct: 5   VEQAKAQMAKTVENTKENFAGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGVPEPRTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ I  S+LG++P  +G V+R+ +PE TEERR   VK+A   AE  K
Sbjct: 65  SVTPFDASQAGAVEKAIRNSDLGVSPNRDGNVIRLTMPELTEERRKEYVKLAKGKAEDGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRR   + + KS K G   ED    L  D+ K+T S    ID+  E K+KEIM 
Sbjct: 125 VAVRNIRRKTKETIDKSVKDGDMGEDEGDRLLKDLDKVTKSVTDEIDALLETKQKEIME 183


>gi|119946594|ref|YP_944274.1| ribosome recycling factor [Psychromonas ingrahamii 37]
 gi|166231213|sp|A1SYW0|RRF_PSYIN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119865198|gb|ABM04675.1| ribosome recycling factor [Psychromonas ingrahamii 37]
          Length = 185

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 105/175 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           + RM  ++   +  +  +RTGR  PS+LD + V  YGS+ PL QV NV+  + R L V+V
Sbjct: 10  QSRMDKSVEAFRSQLSKIRTGRAHPSLLDGIMVPYYGSNTPLRQVGNVSTEDARTLTVTV 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D  ++ +VE+ I  S+LGLNP+  G V+RIP+P  TEERR  L+K+    AE S+I++R
Sbjct: 70  FDASLIKAVEKAIMGSSLGLNPMSAGTVIRIPLPPLTEERRRDLIKIVRGEAENSRIAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD  + LK   K    SED     E  +QK T+  IK I+     K+ E++ 
Sbjct: 130 NIRRDANNDLKLLEKDKDISEDEQRVGEELVQKTTNDHIKQIEDLLVVKEAELLE 184


>gi|319760411|ref|YP_004124349.1| ribosome recycling factor [Candidatus Blochmannia vafer str. BVAF]
 gi|318039125|gb|ADV33675.1| ribosome recycling factor [Candidatus Blochmannia vafer str. BVAF]
          Length = 188

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 117/187 (62%), Gaps = 1/187 (0%)

Query: 1   MNQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           +N++ ++Q ++K++M   I   K ++  +  G VSP+ML+ + VE YGS +PL+Q+ N  
Sbjct: 2   INEICEIQADLKEQMKKCIDSFKINVNKIHVGHVSPNMLNFITVEYYGSVIPLSQLTNSV 61

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           V +PR L ++V+D  M+ ++E+ I  +NLG  PI  G V+RI +P  TE+RR  L+K+  
Sbjct: 62  VEKPRTLAITVFDASMIKTIEKAILTANLGFTPIAHGNVIRITLPILTEDRRRTLIKMMR 121

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             +EKSKIS+RNIRR   D +K   K  + + D     +N+IQ +T+  +  I+   +EK
Sbjct: 122 IESEKSKISLRNIRRIANDKIKVFLKKKEINVDDEYHRQNEIQNLTNFWVNQINMILKEK 181

Query: 180 KKEIMHF 186
           + E+M F
Sbjct: 182 ELELMMF 188


>gi|315924376|ref|ZP_07920598.1| ribosome recycling factor [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622255|gb|EFV02214.1| ribosome recycling factor [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 185

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M   +  L   + TLR GR +  +LD V V+ YG+   +NQ+A V   E R++
Sbjct: 6   MQRAEEKMNKALENLSGSLNTLRAGRANAHILDKVTVDYYGAPTAINQLATVAAPEARLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  +D   + ++E+ I  ++LG NP  +G+++R+ VP+ TEERR  LVK+   Y E+ K
Sbjct: 66  TVQPYDTTALPAIEKAILTADLGFNPSNDGKIIRLAVPQLTEERRKELVKLTKKYGEECK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRR     LK ++K G  SED +   +N +QK+TD  IK ID+  + K++EI+
Sbjct: 126 VAMRNIRRKSDQKLKTAQKDGDISEDEMHDGQNSVQKLTDKKIKEIDAVLKAKEEEIL 183


>gi|7404451|sp|P37706|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=Nuclear located protein D2; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
          Length = 227

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 111/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +++K+RM  TI  +K    ++RT R +P MLD +KVE YG+   L  +A ++  +   L+
Sbjct: 49  KSVKERMEKTIENVKASFNSIRTXRSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLL 108

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +DK  +  +E+ I  S+LG+ P  +G V+R+ +P+ T +RR  L K+    AE+ K+
Sbjct: 109 VNPYDKSSLKDIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKV 168

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD +    K  K  K SED V  L +D+QK+ D  IK +DS F++K+KE+M
Sbjct: 169 ALRNIRRDAIKSYDKLEKEKKLSEDNVKDLSSDLQKVIDEYIKKVDSIFKQKEKELM 225


>gi|254283859|ref|ZP_04958827.1| ribosome recycling factor [gamma proteobacterium NOR51-B]
 gi|219680062|gb|EED36411.1| ribosome recycling factor [gamma proteobacterium NOR51-B]
          Length = 188

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 108/182 (59%), Gaps = 1/182 (0%)

Query: 6   DLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+Q + ++RM  ++  L  +   +RTGR  PS+LD +++E YG+  PL Q+AN+ V + R
Sbjct: 7   DIQSDAEERMEKSLEALDHNFNKIRTGRAHPSLLDSIRIEYYGADTPLIQLANINVEDAR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L V  +DK     +E+ I  S+LGLNP   G V+RIP+P  TEE R   +K A + AE 
Sbjct: 67  TLTVVAFDKSTTPDIEKAIMRSDLGLNPSSAGDVIRIPMPMLTEETRRGYIKQARSEAES 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++SVRN RRD M  LK+  K  + SED     E  IQK+TD  +  I+    EK+ ++M
Sbjct: 127 ARVSVRNARRDAMAMLKELEKEKEISEDEQRRGEEQIQKLTDGFVAKIEKKLSEKESDLM 186

Query: 185 HF 186
             
Sbjct: 187 EI 188


>gi|15616850|ref|NP_240063.1| ribosome recycling factor [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134310|sp|P57328|RRF_BUCAI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|25299706|pir||E84957 ribosome recycling factor [imported] - Buchnera sp. (strain APS)
 gi|10038914|dbj|BAB12949.1| ribosome recycling factor [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|311087130|gb|ADP67210.1| ribosome recycling factor [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087668|gb|ADP67747.1| ribosome recycling factor [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 185

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ ID++  ++RM   I     ++  ++TGR SP++L  + +E +GS  PL QV+N+ V
Sbjct: 2   INQ-IDIKT-RERMEACIQTFHNNITNIKTGRASPTLLHNIYIEYFGSKTPLRQVSNIIV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   L ++V+D  + + + + I  SNL LNP+++G+ + IP+P  TEERR  L+KV   
Sbjct: 60  EDSHTLKINVFDDSITSLIRKSILNSNLDLNPVLQGKDIIIPIPRLTEERRKQLIKVIRG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE S+I +RNIRRD  D +K+  K    SED   + ++ IQ +T+  IK ID   E+K+
Sbjct: 120 DAESSRIQIRNIRRDANDKVKRLLKDKIISEDNEHTSQSKIQIMTNEYIKKIDCILEKKE 179

Query: 181 KEIMHF 186
           KE+M F
Sbjct: 180 KELMKF 185


>gi|255020970|ref|ZP_05293025.1| Ribosome recycling factor [Acidithiobacillus caldus ATCC 51756]
 gi|254969575|gb|EET27082.1| Ribosome recycling factor [Acidithiobacillus caldus ATCC 51756]
          Length = 186

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 110/178 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  +I  LK ++  LRTGR S  +LD V+V+ YGS  PL+QVA+++V + R L+
Sbjct: 8   KDAEQRMKKSIEALKSELTRLRTGRASAGLLDHVEVDYYGSPTPLSQVASISVADARSLL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K ++  +++ I ++ LGLNP+     +R+P+P  +EERR  +VK+     E +++
Sbjct: 68  VTPWEKPLIPKIDKAIRDAGLGLNPVAGSDNVRVPLPALSEERRKEMVKIVRQEGEGARV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RNIRRD +  +K   K    SED     E + QK+TD  +  +D   E K+ ++M 
Sbjct: 128 AIRNIRRDAIAQVKDLLKQKSISEDEGRRAEEEFQKLTDRFVDEVDGVVEAKESDLME 185


>gi|323456603|gb|EGB12470.1| hypothetical protein AURANDRAFT_58615 [Aureococcus anophagefferens]
          Length = 171

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 73/171 (42%), Positives = 109/171 (63%), Gaps = 2/171 (1%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +I  L+ ++ TLRTGR SP +L  V V+ YG+  PLNQ+A+V+V     LVVS +DK
Sbjct: 1   MDKSIGALRNNLGTLRTGRASPDILARVVVDYYGAETPLNQLASVSVSSGTQLVVSPYDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + +VE  I ++NLG+ P  +G+++R+ VP  TE+RR  ++K A A  E +K+++RNIR
Sbjct: 61  SSLGAVESAIVDANLGMAPNNDGELIRLNVPALTEDRRKEILKQAKAVGEDAKVAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +     +KK  K    SED+     N+IQK+TD  IK++D     K+KEIM
Sbjct: 121 KGANSDVKKQGKD--LSEDVAKDANNEIQKLTDKLIKSVDEVVAAKEKEIM 169


>gi|152991633|ref|YP_001357354.1| ribosome recycling factor [Sulfurovum sp. NBC37-1]
 gi|226703269|sp|A6Q688|RRF_SULNB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151423494|dbj|BAF70997.1| ribosome recycling factor Frr [Sulfurovum sp. NBC37-1]
          Length = 185

 Score =  137 bits (346), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 114/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            ++ K+ M  ++  LK+D  +LRTG+V+ +++D +KV+ YG+  PLNQV +V   +   +
Sbjct: 6   FEHTKENMDKSLEALKRDFASLRTGKVTTNIVDNIKVDYYGTPTPLNQVGSVIATDATTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K +++ +ER I E+N+G+NP  +G  +++  P  T E+R  +VK A A AE ++
Sbjct: 66  SITPWEKNLLSDIERAIQEANIGVNPNNDGDFIKLFFPPMTSEQRQEIVKQAKAMAENAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIR+D  + +KK  K  + SED      ++IQKITD  I  +D  F+ K+ +I+
Sbjct: 126 VAIRNIRKDANNKIKKLEKDKEISEDESKRAHDEIQKITDDHIGMVDELFKAKEADIL 183


>gi|189425767|ref|YP_001952944.1| ribosome recycling factor [Geobacter lovleyi SZ]
 gi|238692131|sp|B3E719|RRF_GEOLS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189422026|gb|ACD96424.1| ribosome recycling factor [Geobacter lovleyi SZ]
          Length = 185

 Score =  137 bits (345), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +K  M  ++  L+K+   +RTGR S S+LD VKV+ YG+   L+QVA + V EPR +
Sbjct: 6   ITEMKAHMEKSVEDLRKEYQRIRTGRASTSLLDEVKVDYYGNPSSLSQVATLAVPEPRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+ +M+  +E+ I  +NLGL P  +G+++R+ +P  TEERR  +VK      E  K
Sbjct: 66  TITPWESKMIGPIEKAILNANLGLTPGNDGKLIRLNLPPLTEERRKEIVKGMKKMDEDHK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR  +D LKK  K    +ED +   E ++Q +TDS I  +D     K+KE+M  
Sbjct: 126 VAVRNIRRKAIDDLKKMEKDKSITEDELKKAEKEVQTVTDSIIAKLDEILAHKEKEVMEV 185


>gi|73662818|ref|YP_301599.1| ribosome recycling factor [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123642440|sp|Q49X44|RRF_STAS1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|72495333|dbj|BAE18654.1| ribosome recycling factor [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 184

 Score =  137 bits (345), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 118/176 (67%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K +M  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A+++V E R+LV+S 
Sbjct: 9   KSKMQKSIDNLSRELANISAGRANSNLLNGVNVDYYGAPTPVQQLASISVPEARLLVISP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  V ++E+ I+ +NLG+NP  +G+V+RI VP  TEERR  LVK      E +K++VR
Sbjct: 69  YDKSSVGNIEKAINAANLGVNPSSDGEVIRISVPALTEERRKELVKDVKKIGEDAKVAVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRD  D LKK +K+   +ED + +  +D+QK+TD +IK ++   EEK+++IM  
Sbjct: 129 NVRRDSNDELKKQQKNSDITEDDLRTQTDDVQKLTDDSIKEVEKLLEEKEQDIMSV 184


>gi|213691943|ref|YP_002322529.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|254809493|sp|B7GQS1|RRF_BIFLI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|213523404|gb|ACJ52151.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320458050|dbj|BAJ68671.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 183

 Score =  137 bits (345), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 109/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   +++M  T+   K++   +RTGR +P++L+ + V+ YG+  P+  VA++ V EPR L
Sbjct: 4   IDQAREQMAKTVENTKENFSGIRTGRANPALLNGITVDYYGAPTPIKAVASIGVPEPRTL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ +  S+LG++P  +G V+R+ +PE TEERR   VK+A   AE  K
Sbjct: 64  SVTPFDASQAGAVEKALRNSDLGVSPNRDGNVIRLTMPELTEERRKEYVKLAKGKAEDGK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRR   + L K+ K G+  ED    L  D+ K+T S    ID+  E K+KEIM 
Sbjct: 124 VAVRNIRRKTKEALDKAVKDGEMGEDEGDRLLKDLDKVTKSVTDEIDALLESKQKEIME 182


>gi|302335682|ref|YP_003800889.1| ribosome recycling factor [Olsenella uli DSM 7084]
 gi|301319522|gb|ADK68009.1| ribosome recycling factor [Olsenella uli DSM 7084]
          Length = 181

 Score =  137 bits (345), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 5/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+Q  D  + +  M   ++ L+ +   +RTGR +  +LD ++V+ YG   P+ Q+A V V
Sbjct: 1   MSQYSD--SARKHMDKCLNALRGNFARVRTGRANAHVLDDIRVDYYGQMTPITQLAGVKV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E  MLVV  WDK  + S+E+ I  S+LG+ P  +G  +R+P P+ TEERR  LVK  H 
Sbjct: 59  PEASMLVVEPWDKSALKSIEKAIESSDLGITPSNDGVSIRLPFPKPTEERRKELVKECHK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE++K+++RN RRD      K+ +S + SED VA  +  IQK+TD  +  +D   + K 
Sbjct: 119 YAEEAKVAIRNARRDANG---KAERSEELSEDEVAREKKGIQKVTDDYVAKVDQMLKAKT 175

Query: 181 KEIMHF 186
            E+M  
Sbjct: 176 AEVMEI 181


>gi|283783270|ref|YP_003374024.1| ribosome recycling factor [Gardnerella vaginalis 409-05]
 gi|297243503|ref|ZP_06927435.1| ribosome recycling factor [Gardnerella vaginalis AMD]
 gi|298252794|ref|ZP_06976588.1| ribosome recycling factor [Gardnerella vaginalis 5-1]
 gi|283442171|gb|ADB14637.1| ribosome recycling factor [Gardnerella vaginalis 409-05]
 gi|296888548|gb|EFH27288.1| ribosome recycling factor [Gardnerella vaginalis AMD]
 gi|297533158|gb|EFH72042.1| ribosome recycling factor [Gardnerella vaginalis 5-1]
          Length = 184

 Score =  137 bits (345), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 116/185 (62%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +ID    +++M  ++   K++ M +RTGR +P++L+ + V+ YG+  P+  VA++ V
Sbjct: 1   MSAIID--QAREQMNKSVEATKENFMGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ I +S+LG++P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 59  PEPRTLSVTPFDASQANAVEKAIRDSDLGVSPNRDGNVIRVTMPELTEERRKEYVKLAKN 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ K++VRNIRR   + + KS K G+  ED    L+ ++ K+T     ++D   E K+
Sbjct: 119 KAEEGKVAVRNIRRKAKESIDKSVKDGELGEDEGDRLQKELDKVTKQVTDSLDVLLEGKQ 178

Query: 181 KEIMH 185
           KEIM 
Sbjct: 179 KEIME 183


>gi|262372666|ref|ZP_06065945.1| ribosome recycling factor [Acinetobacter junii SH205]
 gi|262312691|gb|EEY93776.1| ribosome recycling factor [Acinetobacter junii SH205]
          Length = 184

 Score =  137 bits (345), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 107/172 (62%), Gaps = 1/172 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+V  ++
Sbjct: 12  RMQKTLDSLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLIVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA   AE +K+++RNI
Sbjct: 72  RTMVSAIDKAIRESDLGLNPIT-ADSIRVPLPALTEETRRDMQKVARNEAENAKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  +K   K  + SED       DIQKITD  +  +D     K+ E+M
Sbjct: 131 RRDVLGDIKALLKEKEISEDDERRAGEDIQKITDKYVAEVDKRLAAKEAELM 182


>gi|326382902|ref|ZP_08204592.1| ribosome recycling factor [Gordonia neofelifaecis NRRL B-59395]
 gi|326198492|gb|EGD55676.1| ribosome recycling factor [Gordonia neofelifaecis NRRL B-59395]
          Length = 185

 Score =  137 bits (345), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++ L+ DM ++RTGR +P+M + V +E YG+  P+ QVA +   EPR++
Sbjct: 6   LLDAEEKMEKAVAHLRDDMASIRTGRANPAMFNKVVIEYYGAMTPITQVAGINTPEPRLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +++  +  +E  I  S+LG+NP  +G V+R+ VP+ TEERR  L K A    E +K
Sbjct: 66  VIKPYEQSTMNDIETAIRNSDLGVNPTNDGTVIRVAVPQLTEERRKQLGKQARGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR  +D LK+ +K G A ED V   E ++   T +    +D   + K+ E++  
Sbjct: 126 VAIRNVRRKAVDELKRIQKDGDAGEDEVTRAEKELDTTTRTYTDAVDELVKNKEAELLEV 185


>gi|114331998|ref|YP_748220.1| ribosome recycling factor [Nitrosomonas eutropha C91]
 gi|122313298|sp|Q0AEH7|RRF_NITEC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114309012|gb|ABI60255.1| ribosome recycling factor [Nitrosomonas eutropha C91]
          Length = 185

 Score =  137 bits (345), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 108/172 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  LK D   +R+GR    +LD + V+ YG+  P+ Q+ANVT+ + R + V  WD
Sbjct: 12  KMQKSLDALKVDFSKVRSGRPHTGLLDHITVDYYGTPTPIRQLANVTLADARTIGVIPWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+  +++E+ I +S++GLNP+  G+++R+P+P  TEERR  L K+    AE ++I++RNI
Sbjct: 72  KKAFSAIEKAIRDSDMGLNPMTAGEMVRVPMPPLTEERRKDLTKIVRTEAETARIAMRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD    LK+  K    +ED     ++DIQK+TD  I  +D   + K+ E+M
Sbjct: 132 RRDANTQLKELLKDKLIAEDEDRRAQDDIQKLTDRYIAEVDKLLQAKEAELM 183


>gi|298712852|emb|CBJ33372.1| ribosome recycling factor [Ectocarpus siliculosus]
          Length = 251

 Score =  137 bits (345), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 110/179 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + ++RM  ++  ++ ++ TLRTGR +P +LD V VE YG+  PLNQVA+V       L
Sbjct: 72  MASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATAL 131

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +D  ++A +   I E++LGL P  +G V+R+ +P  TE+RR  L K A    E+ K
Sbjct: 132 LVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGK 191

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRR+ +D +KK+ K+    +D     ++ IQK+TD T K ID     K+K+I+ 
Sbjct: 192 VAIRNIRREAVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILK 250


>gi|292492491|ref|YP_003527930.1| ribosome recycling factor [Nitrosococcus halophilus Nc4]
 gi|291581086|gb|ADE15543.1| ribosome recycling factor [Nitrosococcus halophilus Nc4]
          Length = 185

 Score =  137 bits (345), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 77/172 (44%), Positives = 108/172 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  LK+    LR  R   S+LD + V  YG++VPLNQVANV V + R L V+ W+
Sbjct: 12  RMQKSLEALKQAFAKLRANRAHTSLLDHITVSYYGTNVPLNQVANVAVEDARTLAVTPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K+MV ++E+ I  S LGLNP+  G V+RIP+P  TEERR  +V+V    AE ++++VRNI
Sbjct: 72  KQMVPAIEKAIRNSELGLNPVTAGMVIRIPLPPLTEERRREMVRVVRQEAEAARVAVRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD    +K+  K  + SED     E  IQKITDS I  +D     K++++M
Sbjct: 132 RRDSNQTIKELVKEKEISEDDQHRAEEAIQKITDSNIAKVDEILAAKERDLM 183


>gi|219681604|ref|YP_002467990.1| ribosome recycling factor [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471290|ref|ZP_05635289.1| ribosome recycling factor [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254809497|sp|B8D931|RRF_BUCA5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219624447|gb|ACL30602.1| ribosome recycling factor [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 185

 Score =  137 bits (345), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ ID++  ++RM   I     ++  ++TGR SP++L  + +E +GS  PL QV+N+ V
Sbjct: 2   INQ-IDIKT-RERMEACIQTFHNNISNIKTGRASPTLLHNIYIEYFGSKTPLRQVSNIIV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   L ++V+D  + + + + I  SNL LNP+++G+ + IP+P  TEERR  L+KV   
Sbjct: 60  EDSHTLKINVFDDSITSLIRKSILNSNLDLNPVLQGKDIIIPIPRLTEERRKQLIKVIRG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE S+I +RNIRRD  D +K+  K    SED   + ++ IQ +T+  IK ID   E+K+
Sbjct: 120 DAESSRIQIRNIRRDANDKVKRLLKDKIISEDNEHTSQSKIQIMTNEYIKKIDCILEKKE 179

Query: 181 KEIMHF 186
           KE+M F
Sbjct: 180 KELMKF 185


>gi|226366024|ref|YP_002783807.1| ribosome recycling factor [Rhodococcus opacus B4]
 gi|254809526|sp|C1B2U5|RRF_RHOOB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226244514|dbj|BAH54862.1| ribosome recycling factor [Rhodococcus opacus B4]
          Length = 185

 Score =  137 bits (345), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 109/175 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   ++  K D+ ++RTGR +P M + + ++ YG+  P+ Q+A++ V E R++VV  
Sbjct: 10  EEKMEKAVTVAKDDLGSIRTGRANPGMFNRIGIDYYGAFTPITQLASINVPEARLVVVKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++   + ++E  I  S+LG+NP  +G ++RI VP+ TEERR  LVK A +  E +K+SVR
Sbjct: 70  YEASQLNAIETAIRNSDLGVNPSNDGNLIRISVPQLTEERRRELVKQAKSKGEDAKVSVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+RR  MD L + +K G+A ED V   E ++ K T   +  +D   + K+ E++ 
Sbjct: 130 NVRRKAMDELSRIQKDGEAGEDEVGRAEKELDKTTARYVAQVDELVKHKEAELLE 184


>gi|294788085|ref|ZP_06753329.1| ribosome recycling factor [Simonsiella muelleri ATCC 29453]
 gi|294484378|gb|EFG32061.1| ribosome recycling factor [Simonsiella muelleri ATCC 29453]
          Length = 185

 Score =  137 bits (345), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 115/182 (63%), Gaps = 1/182 (0%)

Query: 4   VIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + D+Q + +++M  ++  L +++  +RTGR    +LD V+VE +G+ VP+ Q A++T+++
Sbjct: 2   ISDIQKSTENKMQRSVEVLGENLAKVRTGRAHTGLLDQVEVEYWGNMVPVGQAASLTLID 61

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R + V  ++  M + +E+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    A
Sbjct: 62  ARTIGVKPFESNMASKIEKAIRDSNLGLNPSSVGDLIRVPMPMLTEERRKDLIKVVRGEA 121

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E  ++SVRN+RRD  DH+KK  K  + SED     E  +QK+TD  I  ID     K+++
Sbjct: 122 EDGRVSVRNVRRDANDHIKKLLKDKEISEDDARRGEEAVQKLTDKFIAEIDKMLASKEED 181

Query: 183 IM 184
           +M
Sbjct: 182 LM 183


>gi|21672509|ref|NP_660576.1| ribosome recycling factor [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009151|sp|Q8K9S8|RRF_BUCAP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21623130|gb|AAM67787.1| ribosome recycling factor [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 185

 Score =  137 bits (345), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 107/175 (61%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   I+  +  +  +RTGR SP +L+ + VE +GS VPL Q++NV V     L ++++
Sbjct: 11  EKMKVCINNFQIQVNNVRTGRASPELLNSIYVEYFGSKVPLRQISNVVVENYHTLKINIF 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D    + +++ I  SNL LNPI+ G+ + +P+P  TEERR  L+KV    AE ++I +RN
Sbjct: 71  DDSSTSLIKKAILNSNLDLNPILYGKDIIVPIPGLTEERRTHLIKVIRNNAENARIYIRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IRRD  D +K   KS   SED   + +N IQ +TD  IK ID    EK+K++M F
Sbjct: 131 IRRDANDKIKNYLKSKIISEDNEHAAQNKIQTMTDDYIKKIDKILSEKEKDLMKF 185


>gi|218439649|ref|YP_002377978.1| ribosome recycling factor [Cyanothece sp. PCC 7424]
 gi|226703257|sp|B7K7R4|RRF_CYAP7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|218172377|gb|ACK71110.1| ribosome recycling factor [Cyanothece sp. PCC 7424]
          Length = 182

 Score =  137 bits (344), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 110/177 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++D M  TI   ++   T+RTGR + ++LD V V+ YG+  PL  +AN+T  +   +
Sbjct: 3   LSEVQDNMQKTIESTQRSFNTIRTGRANSALLDRVMVDYYGTETPLKSLANITTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  +  +E+ I  S++GL P  +GQ++R+ +P  T ERR  LVK+A   AE+ K
Sbjct: 63  AIQPYDRGSMGQIEKAIQLSDIGLTPNNDGQMIRLNIPPLTTERRKELVKLAGKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD +D ++K  K+ + SED   +L+++IQK+TD     ID     K+K+I
Sbjct: 123 VAIRNIRRDAIDSVRKQEKNHELSEDESRNLQDEIQKVTDEYTAKIDELLAAKEKDI 179


>gi|302879001|ref|YP_003847565.1| ribosome recycling factor [Gallionella capsiferriformans ES-2]
 gi|302581790|gb|ADL55801.1| ribosome recycling factor [Gallionella capsiferriformans ES-2]
          Length = 185

 Score =  137 bits (344), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 108/172 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  L+ D+  +RTGR    +LD V V+ YGS   + QVAN+T+++ R + V  ++
Sbjct: 12  RMRKSLDALRADLGKVRTGRAHTGLLDHVMVDYYGSPTLVTQVANITLVDARTIGVQPYE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K MV  VER I +++LGLNP   G+++R+P+P  TEERR  ++K+  +  E +KI+VRNI
Sbjct: 72  KSMVGKVERAIRDADLGLNPATNGELIRVPMPMLTEERRRDMIKLVKSEGEDAKIAVRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD    LK   K  + SED    +++DIQK+TD  +  ID     K+ ++M
Sbjct: 132 RRDANGSLKDLLKKKEISEDDERRVQDDIQKLTDRFVSEIDQMLAAKEVDLM 183


>gi|308233714|ref|ZP_07664451.1| ribosome recycling factor [Atopobium vaginae DSM 15829]
 gi|328944064|ref|ZP_08241529.1| ribosome recycling factor [Atopobium vaginae DSM 15829]
 gi|327492033|gb|EGF23807.1| ribosome recycling factor [Atopobium vaginae DSM 15829]
          Length = 181

 Score =  137 bits (344), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 103/173 (59%), Gaps = 3/173 (1%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   I  LK +   +RTGR +P +LD ++V+ YG   P+ Q+A + V EP MLVV  WDK
Sbjct: 12  MNKCIDALKNNFSKVRTGRANPQVLDGIRVDYYGQPTPIVQLAGIKVPEPSMLVVEPWDK 71

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++E+ I  S+LG+ P  +G  +R+P P+ TEERR  LVK    YAE +K++VRN R
Sbjct: 72  SSLKAIEKAIESSDLGITPSNDGTSIRLPFPKPTEERRRELVKECKQYAEDAKVAVRNAR 131

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  +   K+ +  + +ED V   +  IQK+TD  +  ID   + K +E+M  
Sbjct: 132 RDANN---KAERDEELNEDDVNREKKAIQKLTDEFVAKIDEMLKTKSQEVMEI 181


>gi|296171523|ref|ZP_06852787.1| ribosome recycling factor [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894085|gb|EFG73846.1| ribosome recycling factor [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 185

 Score =  137 bits (344), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 109/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  + D+ T+RTGR +P M   + ++ YG+  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVSVARDDLSTIRTGRANPGMFSRIVIDYYGATTPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A +  E ++
Sbjct: 66  VIKPYEASQLGAIENAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQAKSKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVRNIRR  M+ L + RK G+A ED V   E ++ K T      ID   + K+ E++ 
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKELDKATHQYTAQIDELVKHKEGELLE 184


>gi|291456894|ref|ZP_06596284.1| ribosome recycling factor [Bifidobacterium breve DSM 20213]
 gi|291382171|gb|EFE89689.1| ribosome recycling factor [Bifidobacterium breve DSM 20213]
          Length = 183

 Score =  137 bits (344), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/179 (39%), Positives = 110/179 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K++M  T+   K++   +RTGR +P++L+ + V+ YG+  P+  VA++ V EPR L
Sbjct: 4   IDQAKEQMAKTVENTKENFAGIRTGRANPALLNGIVVDYYGAPTPIKAVASIGVPEPRTL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D    A+VE+ I  S+LG++P  +G V+R+ +PE TE+RR   VK+A + AE  K
Sbjct: 64  SVTPFDASQAAAVEKAIRNSDLGVSPNRDGNVIRLTMPELTEDRRKEYVKLAKSKAEDGK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRR   + + KS K G   ED    L  D+ K+T S    ID+  + K+KEIM 
Sbjct: 124 VAVRNIRRKTKETIDKSVKDGDMGEDEGDRLLKDLDKVTKSVTDEIDALLDTKQKEIME 182


>gi|219682161|ref|YP_002468545.1| ribosome recycling factor [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254809498|sp|B8D7D5|RRF_BUCAT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219621894|gb|ACL30050.1| ribosome recycling factor [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311085975|gb|ADP66057.1| ribosome recycling factor [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086549|gb|ADP66630.1| ribosome recycling factor [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 185

 Score =  137 bits (344), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +NQ ID++  ++RM   I     ++  ++TGR SP++L  + +E +GS  PL QV+N+ V
Sbjct: 2   INQ-IDIKT-RERMEACIQTFHNNINNIKTGRASPTLLHNIYIEYFGSKTPLRQVSNIIV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   L ++V+D  + + + + I  SNL LNP+++G+ + IP+P  TEERR  L+KV   
Sbjct: 60  EDSHTLKINVFDDSITSLIRKSILNSNLDLNPVLQGKDIIIPIPRLTEERRKQLIKVIRG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE S+I +RNIRRD  D +K+  K    SED   + ++ IQ +T+  IK ID   E+K+
Sbjct: 120 DAESSRIQIRNIRRDANDKVKRLLKDKIISEDNEHTSQSKIQIMTNEYIKKIDCILEKKE 179

Query: 181 KEIMHF 186
           KE+M F
Sbjct: 180 KELMKF 185


>gi|284051585|ref|ZP_06381795.1| ribosome recycling factor [Arthrospira platensis str. Paraca]
 gi|291566938|dbj|BAI89210.1| ribosome recycling factor [Arthrospira platensis NIES-39]
          Length = 182

 Score =  137 bits (344), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 109/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++++ M   +    +   T+RTGR + S+LD + VE YGS  PL  +A+++  +   +
Sbjct: 3   LADVENLMKKALESTGRSFNTIRTGRANASLLDRITVEYYGSPTPLKSLASISTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  + ++E+ I  S++GL P  +G V+R+ +P  TE RR   VK+A  YAE+ +
Sbjct: 63  TIQPFDRNSLNNIEKAISMSDVGLTPNNDGSVVRLNIPPLTEARRQEFVKLAGKYAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN+RRD +D ++K  KSG  SED    L++ IQK+TD     +D   E K+K+IM
Sbjct: 123 VSVRNVRRDAIDSVRKQEKSGDISEDESRDLQDQIQKLTDKYTAKVDELLEAKEKDIM 180


>gi|159901469|ref|YP_001547716.1| ribosome recycling factor [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894508|gb|ABX07588.1| ribosome recycling factor [Herpetosiphon aurantiacus ATCC 23779]
          Length = 192

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 114/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + +M  +I  L+  +  +RTGR SP++++ +KVE YGS +PLNQ+AN+   E RM+
Sbjct: 13  LRDAESKMKKSIDSLRHTLGAVRTGRASPALVEDLKVEYYGSEMPLNQLANIATPESRMI 72

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  + ++E+ I  S LG+NP  +G+V+R+ +P+ T+ERR  LVK   A  E  K
Sbjct: 73  TIQPYDQGAIKAIEKAIQNSELGINPSNDGRVIRLAIPQLTQERRKELVKQVKAKVEDGK 132

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RR+  D ++K ++    SED     + ++QK+TD   K +++    K+ E+M 
Sbjct: 133 VAIRNVRREAQDAIRKLQQDKAISEDDERRGQEELQKLTDRFQKEVETIGTTKEAEVME 191


>gi|257455346|ref|ZP_05620581.1| ribosome recycling factor [Enhydrobacter aerosaccus SK60]
 gi|257447308|gb|EEV22316.1| ribosome recycling factor [Enhydrobacter aerosaccus SK60]
          Length = 184

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 107/174 (61%), Gaps = 1/174 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +D+M   I  L+     LRTGR  P +L  V V  YGS +PLNQVA++ V + R L+V  
Sbjct: 10  EDKMKKAIEALENAFSKLRTGRAHPGILQGVMVSYYGSEMPLNQVASINVEDSRTLLVQP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D+ MV +V++ I ES+LGLNP+   +V+R+P+P  TEE R  + K+A   AE+ ++SVR
Sbjct: 70  FDRSMVQAVDKAIRESDLGLNPM-SAEVIRVPLPALTEETRKDMQKLARHEAEERRVSVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N RRD  + LK   K  + SED      +DIQK+TD  I +ID     K+ E+M
Sbjct: 129 NARRDANNALKALVKDKQISEDDERRANDDIQKMTDKYIDSIDKMLSSKEAELM 182


>gi|224283164|ref|ZP_03646486.1| ribosome recycling factor [Bifidobacterium bifidum NCIMB 41171]
 gi|310287530|ref|YP_003938788.1| ribosome recycling factor RRF [Bifidobacterium bifidum S17]
 gi|311064443|ref|YP_003971168.1| ribosome recycling factor Rrf [Bifidobacterium bifidum PRL2010]
 gi|313140313|ref|ZP_07802506.1| ribosome recycling factor [Bifidobacterium bifidum NCIMB 41171]
 gi|309251466|gb|ADO53214.1| ribosome recycling factor RRF [Bifidobacterium bifidum S17]
 gi|310866762|gb|ADP36131.1| Rrf Ribosome Recycling Factor [Bifidobacterium bifidum PRL2010]
 gi|313132823|gb|EFR50440.1| ribosome recycling factor [Bifidobacterium bifidum NCIMB 41171]
          Length = 184

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 111/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA++ V EPR L
Sbjct: 5   VEQAKEQMNKSVENTKENFAGIRTGRANPALLNGIVVDYYGAPTPLKAVASIGVPEPRTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D    + VE+ + +S+LG+NP  +G V+RI +PE T ERR   VK+A + AE  K
Sbjct: 65  SVTPFDVSQASKVEKALRDSDLGVNPNRDGNVIRITMPELTSERRKEYVKLAKSKAEDGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRR   + + KS K G+  ED    L  ++ K+T      +D+ FE K+KEIM 
Sbjct: 125 VAVRNIRRKAKETIDKSVKDGEMGEDEGDRLLKELDKVTKQVTDQLDALFETKQKEIME 183


>gi|332291336|ref|YP_004429945.1| ribosome recycling factor [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169422|gb|AEE18677.1| ribosome recycling factor [Krokinobacter diaphorus 4H-3-7-5]
          Length = 185

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 3/174 (1%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M D I  L K ++T+R G+ SP+ML  + V  YGS  PL+QVANV   + R + V  
Sbjct: 13  KEAMDDAIVHLAKRLLTIRAGKASPAMLQGLMVNYYGSPTPLSQVANVNTPDGRTITVQP 72

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +E+ I  +NLG NP+  G+ + I VP  TEERR  LVK A A AE SK+ VR
Sbjct: 73  WEKSLMQEIEKAIINANLGFNPMNNGENIIINVPPLTEERRKDLVKQARAEAEDSKVGVR 132

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R++  + +K   K   AS+D  A+ E DIQK+TD  IK I+    +K+ EIM
Sbjct: 133 NDRKNANNDIK---KVDDASDDEKANAEVDIQKLTDIHIKKIEDVLSKKEAEIM 183


>gi|160880757|ref|YP_001559725.1| ribosome recycling factor [Clostridium phytofermentans ISDg]
 gi|190360239|sp|A9KMX5|RRF_CLOPH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|160429423|gb|ABX42986.1| ribosome recycling factor [Clostridium phytofermentans ISDg]
          Length = 184

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 112/172 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  LK++ + +R GR +P +LD ++V+ YG+   +  VANV+V E R++ +  W+
Sbjct: 11  KMQKSLDSLKEEYVGIRAGRANPHLLDKLRVDYYGTPSAIQAVANVSVPEARVIQIQPWE 70

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            +++  +E+ I  S+LGL P  +G+V+R+  PE TEERR  LVK     AE +K++VRN+
Sbjct: 71  AKLIKEIEKAIIASDLGLTPSNDGKVIRLVFPELTEERRKDLVKDVKKKAENTKVAVRNV 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  D +KK  K+ + SED    +E++IQKITD  I  +D   E+K KEI+
Sbjct: 131 RRDANDAIKKLAKANEISEDEQKQIEDEIQKITDKFITEVDKVMEDKSKEIL 182


>gi|251771482|gb|EES52059.1| ribosome recycling factor [Leptospirillum ferrodiazotrophum]
          Length = 184

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 118/179 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL+    +M   +   +K++ TLRTGR S ++++ ++++ YG+ V L++VA + +++ RM
Sbjct: 4   DLKGYGVKMDQAVEHFRKEISTLRTGRPSLALVEHIRLDYYGNQVSLDKVAALNIVDNRM 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + ++ W+ ++++ +E+ I  +NLG+ P  +G+ +R+ VP  TEERR  LVK+    AE++
Sbjct: 64  ITITPWETKLISDIEKAIMGANLGMTPQNDGKCVRLVVPPMTEERRKELVKILKKMAEEA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           K+S+RNIRRD  + LKK  K G  +ED V  L+ D+QK+ D     ++   ++K++EI+
Sbjct: 124 KVSLRNIRRDANEDLKKKSKDGLITEDRVKRLQEDVQKMVDGASSKVEEHAKKKEQEIL 182


>gi|256827506|ref|YP_003151465.1| ribosome recycling factor [Cryptobacterium curtum DSM 15641]
 gi|256583649|gb|ACU94783.1| ribosome recycling factor [Cryptobacterium curtum DSM 15641]
          Length = 186

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 107/176 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM   +  L +    +RTGR +  +LD ++V+ YG   P+NQ+A +   +  MLV+  
Sbjct: 11  EERMEKAVDSLGEAFSNVRTGRANAMVLDRIRVDYYGVPTPINQMAAIKTPDAHMLVIEP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK  + ++E  ++ SNLGL P  +G ++R+  P  TEERR  LVK   AYAE+++I+VR
Sbjct: 71  WDKGTLGAIEHALNNSNLGLTPTNDGNLIRLSFPTLTEERRRELVKQCKAYAEEARIAVR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N RRD    ++K+ K+    ED     E DIQK+TDS I  ++  F++K+ E+M  
Sbjct: 131 NARRDANSAVEKAVKNDGLPEDEQRRSEADIQKLTDSYIAKVEESFKKKEAEVMEI 186


>gi|150024539|ref|YP_001295365.1| ribosome recycling factor [Flavobacterium psychrophilum JIP02/86]
 gi|190360243|sp|A6GWS4|RRF_FLAPJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149771080|emb|CAL42547.1| Ribosome recycling factor [Flavobacterium psychrophilum JIP02/86]
          Length = 187

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 112/186 (60%), Gaps = 3/186 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M + ID  L + K+ M  +I+ L+K+ + +R G+ SP+ML  V V+ YGS  PL+QVA +
Sbjct: 1   MTEEIDFILDSTKESMEGSIAHLEKEFLNIRAGKASPAMLGSVFVDYYGSATPLSQVAKI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +V + R + +  ++K M+  +E+ I  +N+G NP+  G V+ I VP  TEERR  L K A
Sbjct: 61  SVPDARTITLQPFEKNMLQVIEKAIMIANIGFNPMNNGDVIIISVPPLTEERRRELAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AE +KI VRN+R+D    +KK  K G  SED     E  +QK+TDS I+ +D     
Sbjct: 121 KTEAEDAKIGVRNVRKDSNSDIKKLEKEG-TSEDACKIAEESVQKLTDSFIRKVDELLVV 179

Query: 179 KKKEIM 184
           K+ EIM
Sbjct: 180 KEAEIM 185


>gi|307637928|gb|ADN80378.1| Ribosome recycling factor [Helicobacter pylori 908]
 gi|325996531|gb|ADZ51936.1| Ribosome recycling factor [Helicobacter pylori 2018]
 gi|325998120|gb|ADZ50328.1| Ribosome recycling factor [Helicobacter pylori 2017]
          Length = 185

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 108/174 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  ++  L +D  TLR+ +VS ++LD +KV+ YG+  PLNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSVQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTPLNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTSEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  I+ ID   + K+  I+
Sbjct: 130 NIRQDANNQVKKLEKDKEISEDESKKAQEQIQKITDEAIRKIDESVKNKEDAIL 183


>gi|119505669|ref|ZP_01627739.1| ribosome recycling factor [marine gamma proteobacterium HTCC2080]
 gi|119458481|gb|EAW39586.1| ribosome recycling factor [marine gamma proteobacterium HTCC2080]
          Length = 185

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 104/174 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +  L      +RTGR  PS+LD ++ E YG+  PLNQ+AN+TV + R L VS +D
Sbjct: 12  RMVKALDALGHHFNKIRTGRAHPSLLDGIRAEYYGALTPLNQLANITVEDARTLAVSAFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M  ++E+ I +S+LGLNP   G V+RIP+P  TEE R   +K A A AE  ++S+R+ 
Sbjct: 72  KSMTPTIEKAIMKSDLGLNPATAGDVMRIPMPMLTEETRRGFIKQAKAEAEAGRVSIRSA 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD    LK+  K  + SED     ++ IQK+TD+ +  ++     K+ ++M  
Sbjct: 132 RRDANGMLKELLKDKEISEDDERRAQDVIQKLTDNFVAKVEEALAAKETDLMEI 185


>gi|262370222|ref|ZP_06063548.1| ribosome releasing factor [Acinetobacter johnsonii SH046]
 gi|262314564|gb|EEY95605.1| ribosome releasing factor [Acinetobacter johnsonii SH046]
          Length = 184

 Score =  136 bits (343), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/177 (42%), Positives = 110/177 (62%), Gaps = 1/177 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  L+     +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+
Sbjct: 7   KDAEDRMNKSLDSLEHGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +++ MVA++++ I ES+LGLNPI     +R+P+   TEE R  + KVA   AE +K+
Sbjct: 67  IQPFERTMVAAIDKAIRESDLGLNPIT-ADAIRVPMAALTEETRRDMQKVARNEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  +K   K  + SED      +DIQKITD  +  ID     K+ E++
Sbjct: 126 AVRNIRRDVLGDIKALLKEKEISEDDERRASDDIQKITDKFVAEIDKRLANKEAELL 182


>gi|118472629|ref|YP_886878.1| ribosome recycling factor [Mycobacterium smegmatis str. MC2 155]
 gi|166230801|sp|A0QVE0|RRF_MYCS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118173916|gb|ABK74812.1| ribosome recycling factor [Mycobacterium smegmatis str. MC2 155]
          Length = 185

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 112/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  + ++ ++RTGR +P M + + ++ YGS  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVSVARDELGSIRTGRANPGMFNRINIDYYGSMTPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ +P+ TEERR  LVK A +  E +K
Sbjct: 66  VIKPYEASQLRAIEDAIRNSDLGVNPSNDGNIIRVAIPQLTEERRRELVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVRNIRR  M+ L + +K G+A ED V+  E D+ K T +    ID   + K+ E++ 
Sbjct: 126 VSVRNIRRKAMEELSRIKKDGEAGEDEVSRAEKDLDKSTHTYTAQIDELVKHKESELLE 184


>gi|203284046|ref|YP_002221786.1| ribosome releasing factor [Borrelia duttonii Ly]
 gi|203287586|ref|YP_002222601.1| ribosome releasing factor [Borrelia recurrentis A1]
 gi|226749923|sp|B5RLJ5|RRF_BORDL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749924|sp|B5RQU6|RRF_BORRA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|201083489|gb|ACH93080.1| ribosome releasing factor [Borrelia duttonii Ly]
 gi|201084806|gb|ACH94380.1| ribosome releasing factor [Borrelia recurrentis A1]
          Length = 184

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 110/176 (62%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++MG  +  L+ +  +LRTGRV+ ++ D V V+ YG   PL +VAN++V E R++V+ 
Sbjct: 8   LDEKMGRVVLSLESEYKSLRTGRVNSALFDKVFVDYYGEKTPLTRVANISVPEARLIVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WD+ +++ +E+ I  S+L +NP  +G VLRI VP  T ERR  +VK A   AE  KI+ 
Sbjct: 68  PWDRSLLSKIEQAILNSDLSMNPSSDGSVLRIKVPVLTIERRKEIVKQAKKIAEDHKIAT 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RNIR +  +  KK  K  + +ED +  + +DIQ+ T+  IK ID  F+ K KEIM 
Sbjct: 128 RNIRHELNNKAKKQEKDSQITEDDLRRILDDIQRDTNFYIKKIDGIFDLKAKEIME 183


>gi|120403212|ref|YP_953041.1| ribosome recycling factor [Mycobacterium vanbaalenii PYR-1]
 gi|166230806|sp|A1T785|RRF_MYCVP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119956030|gb|ABM13035.1| ribosome recycling factor [Mycobacterium vanbaalenii PYR-1]
          Length = 185

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 108/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D+ ++RTGR +P M + + V+ YG+  P+ Q++++ V E RM+
Sbjct: 6   LFDAEEKMEKAVAVARDDLASIRTGRANPGMFNRIHVDYYGAVTPITQLSSINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   +  +E  I  S+LG+NP  +G V+R+ +P+ TEERR  LVK A    E +K
Sbjct: 66  VIKPYEASQLRPIEDAIRNSDLGVNPTNDGNVIRVSIPQLTEERRRDLVKQAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVRNIRR  M+ L + +K G A ED VA  E D+ K T      ID   + K+ E++ 
Sbjct: 126 VSVRNIRRKAMEELTRIKKDGDAGEDDVARAEKDLDKTTQQYTHQIDELVKHKEGELLE 184


>gi|293609255|ref|ZP_06691557.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827707|gb|EFF86070.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122521|gb|ADY82044.1| ribosome releasing factor [Acinetobacter calcoaceticus PHEA-2]
          Length = 184

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 108/172 (62%), Gaps = 1/172 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T+  L+     +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+V  ++
Sbjct: 12  RMLKTLESLELGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLLVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + K+A + AE +K+++RNI
Sbjct: 72  RTMVSAIDKAIRESDLGLNPIT-ADAIRVPLPALTEETRRDMQKIARSEAENAKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M
Sbjct: 131 RRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELM 182


>gi|219362787|ref|NP_001137010.1| hypothetical protein LOC100217177 [Zea mays]
 gi|194697972|gb|ACF83070.1| unknown [Zea mays]
 gi|223972995|gb|ACN30685.1| unknown [Zea mays]
          Length = 266

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 109/176 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M   I  ++ +  T+RTGR SP+MLD ++VE YG+ V L  +A ++  +   L++  
Sbjct: 91  KEKMEKAIETVQTNFNTVRTGRASPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLLIQP 150

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +E+ I  +NLG+ P  +G+V+R+ VP  T +RR  L K     AE  K+++R
Sbjct: 151 YDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLAEDGKVAIR 210

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD +    K +K  K SED V  L  D+QK+TD  +KNIDS  ++K++E+M  
Sbjct: 211 NIRRDAIKAYDKLQKEKKLSEDNVKDLSADLQKVTDEYMKNIDSIQKQKEQELMKI 266


>gi|262279362|ref|ZP_06057147.1| ribosome releasing factor [Acinetobacter calcoaceticus RUH2202]
 gi|262259713|gb|EEY78446.1| ribosome releasing factor [Acinetobacter calcoaceticus RUH2202]
          Length = 184

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/172 (43%), Positives = 107/172 (62%), Gaps = 1/172 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T+  L+     +RTGR  PS+L+ V V  YGS VPLNQVANV + + R LVV  ++
Sbjct: 12  RMLKTLESLELGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGIEDSRTLVVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA   AE +K+++RNI
Sbjct: 72  RTMVSAIDKAIRESDLGLNPIT-ADAIRVPLPALTEETRRDMQKVARNEAENAKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M
Sbjct: 131 RRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELM 182


>gi|81428873|ref|YP_395873.1| ribosome recycling factor (ribosome releasing factor) (RRF)
           [Lactobacillus sakei subsp. sakei 23K]
 gi|123564051|sp|Q38W67|RRF_LACSS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78610515|emb|CAI55566.1| Ribosome recycling factor (ribosome releasing factor) (RRF)
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 185

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 115/177 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K+ M    + L++ +  +R GR + S+++ V VE YG+  PLNQ+A +T+ E R+L
Sbjct: 6   LEQAKENMEKAEASLRRTLGQIRAGRANASLVNRVNVEYYGAMTPLNQIAAITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+ ++ +++G++P  +G V+R+ +P+ T ERR  + K     AE +K
Sbjct: 66  LITPYDKGALEDIEKALYTADIGISPANDGSVIRLVIPQLTGERRKEIAKEVGKEAELAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           + VRN RRD MD+LKK+ K+ + SED +  LE  +Q +T+   K ID+  ++K+KEI
Sbjct: 126 VVVRNARRDAMDNLKKAEKASEISEDEMHDLEEQVQNLTNEATKKIDAISKDKEKEI 182


>gi|329961847|ref|ZP_08299861.1| ribosome recycling factor [Bacteroides fluxus YIT 12057]
 gi|328531287|gb|EGF58131.1| ribosome recycling factor [Bacteroides fluxus YIT 12057]
          Length = 186

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L++ ++ +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 8   LDEAQEKMDMAVMYLEEALVHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRVIEKAIIDSPLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKKS K G A ED   S E  +QKI D  IK ID     K KEIM
Sbjct: 128 VSVRNARRDAIDALKKSVKDGLA-EDAQKSGEEKLQKIHDKYIKQIDDMLAAKDKEIM 184


>gi|220915424|ref|YP_002490728.1| ribosome recycling factor [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254809486|sp|B8J9V9|RRF_ANAD2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219953278|gb|ACL63662.1| ribosome recycling factor [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 188

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++  R+  T+  L+ ++  +RTGR S  +LD V+V+ YG+  PLNQVA ++V E R++
Sbjct: 9   LDDLHGRILKTLDQLRTELAAVRTGRASLHLLDNVRVDYYGTPTPLNQVATLSVPEARLI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  W+K M+  +E+ I + NLGLNP+ +  ++R+P+P  TEERR  +VK      E+ K
Sbjct: 69  VVKPWEKSMIPPIEKAIRDGNLGLNPMSDKDLVRVPIPALTEERRKEIVKQVKHKGEEHK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RR+  + ++ + K G  S D        +QK TD  +K ID     K+K+++  
Sbjct: 129 IAVRNVRREAKELIEVAEKDGDISGDDAEKALEKMQKETDDGVKKIDEIVAAKEKDVLQV 188


>gi|148656147|ref|YP_001276352.1| ribosome recycling factor [Roseiflexus sp. RS-1]
 gi|166231220|sp|A5UUU9|RRF_ROSS1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|148568257|gb|ABQ90402.1| ribosome recycling factor [Roseiflexus sp. RS-1]
          Length = 185

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM      L+  + T+RTGR SP++++ + VEAYG+ +PLNQ+A +TV EPR+L
Sbjct: 6   LREAESRMKKATEALRNHLATIRTGRASPALVEHLHVEAYGATLPLNQLATITVPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   V ++ + I  S LG+ P  +G+V+R+ +P+ TE RR  L K+  A  E+SK
Sbjct: 66  VIQPFDANTVKAISKAIMNSELGITPTDDGRVIRLAIPQLTEARRKELTKLVRARVEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR+ ++ L+        SED     +  +Q++TD  ++ +D     K+ E+M  
Sbjct: 126 IALRNIRREALEDLRDLEHEKMISEDEHRRAQEKLQELTDRFVRELDHIGATKEAEVMEI 185


>gi|197120712|ref|YP_002132663.1| ribosome recycling factor [Anaeromyxobacter sp. K]
 gi|238689905|sp|B4UMC6|RRF_ANASK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|196170561|gb|ACG71534.1| ribosome recycling factor [Anaeromyxobacter sp. K]
          Length = 188

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++  R+  T+  L+ ++  +RTGR S  +LD V+V+ YG+  PLNQVA ++V E R++
Sbjct: 9   LDDLHGRILKTLDQLRTELAAVRTGRASLHLLDNVRVDYYGTPTPLNQVATLSVPEARLI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  W+K M+  +E+ I + NLGLNP+ +  ++R+P+P  TEERR  +VK      E+ K
Sbjct: 69  VVKPWEKSMIPPIEKAIRDGNLGLNPMSDKDLVRVPIPALTEERRKEIVKQVKHKGEEHK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RR+  + ++ + K G  S D        +QK TD  +K ID     K+K+++  
Sbjct: 129 IAVRNVRREAKELIEVAEKDGDISGDDAEKALEKMQKETDEGVKKIDEIVAAKEKDVLQV 188


>gi|332705597|ref|ZP_08425673.1| ribosome recycling factor [Lyngbya majuscula 3L]
 gi|332355389|gb|EGJ34853.1| ribosome recycling factor [Lyngbya majuscula 3L]
          Length = 182

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++  M   +   ++   T+RTGR S S+LD V VE YG+  PL  +AN+   +   +
Sbjct: 3   LADVETSMQKAVEATQRAFNTIRTGRASTSLLDRVMVEYYGTPTPLKSLANINTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK M++ +E+ I  S+L L P   G+V+R+ +P  T ERR   VK+A  +AE+ +
Sbjct: 63  TIQPYDKSMLSQIEKAITLSDLDLPPNNNGEVVRLNIPPLTSERRKEFVKMASKFAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD +D ++K  K+ + SED    L+++IQK+T+   K +D  F  K+K+IM
Sbjct: 123 VSIRNIRRDAVDSVRKQDKNKEISEDESRDLQDEIQKLTNKYTKKVDEVFAAKEKDIM 180


>gi|90415796|ref|ZP_01223729.1| ribosome recycling factor [marine gamma proteobacterium HTCC2207]
 gi|90332170|gb|EAS47367.1| ribosome recycling factor [marine gamma proteobacterium HTCC2207]
          Length = 185

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 103/174 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +  L      +RTGR  PS+LD + V+ YG + PL Q A++ + + R L ++ W+
Sbjct: 12  RMTKALEALGNAFNKIRTGRAHPSLLDGIHVDYYGVNTPLAQAASIVIEDARTLSLTPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K +V ++E+ I +S+LGLNP   G V+R+P+P  TEE R    K A A AE  +ISVRN+
Sbjct: 72  KSLVPAIEKAILKSDLGLNPTTAGAVIRLPLPSLTEETRKVYGKQAKAEAENGRISVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD +  LK   K    SED     +++IQKITDS I  ID     K+K++M  
Sbjct: 132 RRDVLSSLKALLKDKDISEDEERRGQDEIQKITDSFIARIDEALVAKEKDLMEI 185


>gi|23466062|ref|NP_696665.1| ribosome recycling factor [Bifidobacterium longum NCC2705]
 gi|189439270|ref|YP_001954351.1| ribosome recycling factor [Bifidobacterium longum DJO10A]
 gi|227547303|ref|ZP_03977352.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|239621373|ref|ZP_04664404.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|312132645|ref|YP_003999984.1| frr [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482870|ref|ZP_07941878.1| ribosome recycling factor [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689306|ref|YP_004209040.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           157F]
 gi|322691318|ref|YP_004220888.1| ribosome recycling factor [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|34924973|sp|Q8G483|RRF_BIFLO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238692052|sp|B3DRT4|RRF_BIFLD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|23326787|gb|AAN25301.1| ribosome recycling factor [Bifidobacterium longum NCC2705]
 gi|189427705|gb|ACD97853.1| Ribosome recycling factor [Bifidobacterium longum DJO10A]
 gi|227212262|gb|EEI80158.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|239515834|gb|EEQ55701.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|291516839|emb|CBK70455.1| ribosome recycling factor [Bifidobacterium longum subsp. longum F8]
 gi|311773596|gb|ADQ03084.1| Frr [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915715|gb|EFV37129.1| ribosome recycling factor [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456174|dbj|BAJ66796.1| ribosome recycling factor [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320460642|dbj|BAJ71262.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           157F]
          Length = 183

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 109/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K++M  T+   K++   +RTGR +P++L+ + V+ YG+  P+  VA++ V EPR L
Sbjct: 4   IDQAKEQMAKTVENTKENFSGIRTGRANPALLNGITVDYYGAPTPIKAVASIGVPEPRTL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ +  S+LG++P  +G V+R+ +PE TE+RR   VK+A   AE  K
Sbjct: 64  SVTPFDASQAGAVEKALRNSDLGISPNRDGNVIRLTMPELTEDRRKEYVKLAKGKAEDGK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRR   + + K+ K G+  ED    L  D+ K+T S    ID+  E K+KEIM 
Sbjct: 124 VAVRNIRRKTKETIDKAVKDGEMGEDEGDRLLKDLDKVTKSVTDEIDTLLETKQKEIME 182


>gi|255036758|ref|YP_003087379.1| ribosome recycling factor [Dyadobacter fermentans DSM 18053]
 gi|254949514|gb|ACT94214.1| ribosome recycling factor [Dyadobacter fermentans DSM 18053]
          Length = 186

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 109/179 (60%), Gaps = 1/179 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + KD M   I  L  ++  +R G+ SP ML+ +++E YGS  P+  VA +   + R L
Sbjct: 8   LDDAKDTMDGAIKHLIIELGKIRAGKASPQMLEGLQIEYYGSMTPIQNVATINTPDARTL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  ++K+++  +E+ I  SNLG +P  +G+++RI VP   EERR  LVK A    E +K
Sbjct: 68  AIKPFEKKIINDIEKAIRNSNLGFSPSNDGEMIRISVPPLNEERRRELVKRAKNEIETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRNIR+D  + L+K  K G  SED+V S E  +QK+TDS +  I+  F  K+KEIM 
Sbjct: 128 INVRNIRQDANNSLRKLTKEG-VSEDLVKSSEERVQKLTDSFVAKIEQIFSVKEKEIME 185


>gi|156743850|ref|YP_001433979.1| ribosome recycling factor [Roseiflexus castenholzii DSM 13941]
 gi|189044069|sp|A7NQW5|RRF_ROSCS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|156235178|gb|ABU59961.1| ribosome recycling factor [Roseiflexus castenholzii DSM 13941]
          Length = 185

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM      L+  + T+RTGR SP++++ + VEAYG+ +PLNQ+A +TV EPRML
Sbjct: 6   LREAESRMKKATEALRNHLATIRTGRASPALVEHLHVEAYGATLPLNQLATITVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   V ++ + I  S LG+ P  +G+++R+ +P+ TE RR  L K+  A  E+SK
Sbjct: 66  VIQPFDANTVKAISKAIMNSELGITPTDDGRLIRLAIPQLTEARRKELTKLVRARVEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+ ++ L+        SED     +  +Q++TD  ++ +D     K+ E+M  
Sbjct: 126 VALRNIRREALEDLRDLEHEKMISEDEHRRAQEKLQELTDRYVRELDHIGATKEAEVMEI 185


>gi|124005436|ref|ZP_01690277.1| ribosome recycling factor [Microscilla marina ATCC 23134]
 gi|123989258|gb|EAY28836.1| ribosome recycling factor [Microscilla marina ATCC 23134]
          Length = 187

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 110/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+ M   +     ++  +R G+  P+MLD ++V+ YG+  PLNQVA+VT  + R L
Sbjct: 9   LAEAKELMDKAVQHTNHELNKIRAGKAMPNMLDSIQVDYYGAPTPLNQVASVTAPDARTL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++K ++A +E+ I +S+LGLNP  +G+ +RI +P  TEERR  LVK      E  K
Sbjct: 69  MIRPFEKSVIAGIEKAIRDSDLGLNPQNDGENIRINIPALTEERRKQLVKQVKQEIESGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN+R+D  + LK  +K G ASED V   E  +QK+T+     +D  +E+K+ E+M
Sbjct: 129 VSIRNVRKDTNNSLKDLQKEG-ASEDEVKRAEESVQKLTNDFTNKVDDLYEKKETELM 185


>gi|255320443|ref|ZP_05361624.1| ribosome recycling factor [Acinetobacter radioresistens SK82]
 gi|262378339|ref|ZP_06071496.1| ribosome recycling factor [Acinetobacter radioresistens SH164]
 gi|255302415|gb|EET81651.1| ribosome recycling factor [Acinetobacter radioresistens SK82]
 gi|262299624|gb|EEY87536.1| ribosome recycling factor [Acinetobacter radioresistens SH164]
          Length = 184

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 107/172 (62%), Gaps = 1/172 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R LVV  ++
Sbjct: 12  RMQKSLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLVVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA   AE +K+++RNI
Sbjct: 72  RTMVSAIDKAIRESDLGLNPIT-ADAIRVPMPALTEETRRDMQKVARTEAENAKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  +K   K  + SED       +IQKITD  +  +D     K+ E+M
Sbjct: 131 RRDVLGDIKALLKEKEISEDDERRAGEEIQKITDKYVAEVDKRLAAKEAELM 182


>gi|225352148|ref|ZP_03743171.1| hypothetical protein BIFPSEUDO_03763 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157395|gb|EEG70734.1| hypothetical protein BIFPSEUDO_03763 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 184

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 108/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K +M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V EPR L
Sbjct: 5   VEQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPEPRTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A   AE  K
Sbjct: 65  SVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKGKAEDGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRR   + L K+ K G+  ED    L  ++ KIT  T   +D+  E K+KEIM 
Sbjct: 125 VAVRNIRRKAKESLDKAIKDGEMGEDEGDRLLKELDKITKQTTDELDTLLEAKQKEIME 183


>gi|190571622|ref|YP_001975980.1| ribosome recycling factor [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019024|ref|ZP_03334831.1| ribosome recycling factor [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238057838|sp|B3CNH2|RRF_WOLPP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|190357894|emb|CAQ55354.1| ribosome recycling factor [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995133|gb|EEB55774.1| ribosome recycling factor [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 185

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 111/175 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+RM  TI     DM  +RTGR + S+LD + V  YG H  LNQVA V+ ++ + L V V
Sbjct: 10  KERMLKTIQSFHDDMKGVRTGRANASLLDGIVVNIYGGHQKLNQVAGVSAIDNKTLSVKV 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD   +  V+  I  +NL LNP+VEG  +RI +P+ T+E R  LVK+ H ++E +++++R
Sbjct: 70  WDATAIGEVKNAIINANLNLNPVVEGNTIRIVLPDLTQETREKLVKLLHQFSENARVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRD M+ +++ +K+ + SED     + +IQ ITD  +K +D     K+K+I+H
Sbjct: 130 NIRRDVMEEIEEMKKNKEISEDDFHVAKKEIQNITDDNVKKVDDDLSIKEKDILH 184


>gi|292670556|ref|ZP_06603982.1| ribosome recycling factor [Selenomonas noxia ATCC 43541]
 gi|292647722|gb|EFF65694.1| ribosome recycling factor [Selenomonas noxia ATCC 43541]
          Length = 185

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 110/173 (63%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   I  L+++  +LR GR +P++LD V V  YG+   +NQ+A VTV EP M+V++ W+K
Sbjct: 13  MNKAIDVLRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMIVITPWEK 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
           E++  +E  I +S+LGL+P  +G V+R+ VP+ T+ERR  L+K      E++K+++RNIR
Sbjct: 73  EILHDIEIAISKSDLGLSPNSDGTVIRLAVPQPTQERRKELIKTVGKKTEEAKVALRNIR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  + +KK  K  + +ED     ++ +QK+ D  +K ++     K+KE+M  
Sbjct: 133 RDANEAIKKLEKDKEINEDESKRGQDSVQKLVDKFVKQMEEMRASKEKEVMEI 185


>gi|296085196|emb|CBI28691.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 115/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +++K+RM  TI  ++ +  ++RTGR +P++LD V+VE YG+ V L  +A ++  +   L+
Sbjct: 96  KDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLL 155

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  +  +E+ I  S+LGL P  +G+V+R+ +P+ T ERR  L KV     E+ K+
Sbjct: 156 VQPYDKSSLKVIEKAIVSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKV 215

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD +   +K  K  K SED V  L +D+QK+ D  +K I++ +++K+KE++
Sbjct: 216 ALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELL 272


>gi|317014647|gb|ADU82083.1| ribosome recycling factor [Helicobacter pylori Gambia94/24]
          Length = 185

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 108/174 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  ++  L +D  TLR+ +VS +++D +KV+ YG+  PLNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSVQALNRDFSTLRSAKVSVNIVDHIKVDYYGTPTPLNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNQVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAIL 183


>gi|119025802|ref|YP_909647.1| ribosome recycling factor [Bifidobacterium adolescentis ATCC 15703]
 gi|154487366|ref|ZP_02028773.1| hypothetical protein BIFADO_01216 [Bifidobacterium adolescentis
           L2-32]
 gi|166230413|sp|A1A1I2|RRF_BIFAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118765386|dbj|BAF39565.1| ribosome recycling factor [Bifidobacterium adolescentis ATCC 15703]
 gi|154083884|gb|EDN82929.1| hypothetical protein BIFADO_01216 [Bifidobacterium adolescentis
           L2-32]
          Length = 184

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 109/185 (58%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  ++D    K +M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V
Sbjct: 1   MATIVD--QAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 59  PEPRTLAVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKIAKG 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + L K+ K G   ED    L  ++ K+T  T   +D+  E K+
Sbjct: 119 KAEDGKVAVRNIRRKAKESLDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDALLETKQ 178

Query: 181 KEIMH 185
           KEIM 
Sbjct: 179 KEIME 183


>gi|118580463|ref|YP_901713.1| ribosome recycling factor [Pelobacter propionicus DSM 2379]
 gi|166230813|sp|A1AQN5|RRF_PELPD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118503173|gb|ABK99655.1| ribosome recycling factor [Pelobacter propionicus DSM 2379]
          Length = 185

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 111/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++K  M  T++ LK +   +RTGR S ++LD VK++ YG+  P++Q+A + + EPRM+
Sbjct: 6   LSDMKTHMEKTVAVLKAEFQKVRTGRASTAILDSVKMDYYGNPTPISQIATLAIPEPRMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+ + ++ +E+ I  +N+GL P  +G+ +R+ +P  TEERR  +VK     AE ++
Sbjct: 66  TITPWEAKQISVIEKAIFNANIGLTPSNDGKSIRLSLPPLTEERRREIVKDLKKMAEDNR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD +D LKK  K    +ED +   E ++Q  T S    ID     K+KE+M 
Sbjct: 126 VALRNIRRDAIDRLKKLEKDKSITEDELKKYEKEVQDNTKSFEIKIDEAMTNKEKEVME 184


>gi|299769701|ref|YP_003731727.1| ribosome recycling factor [Acinetobacter sp. DR1]
 gi|298699789|gb|ADI90354.1| ribosome recycling factor [Acinetobacter sp. DR1]
          Length = 184

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 107/172 (62%), Gaps = 1/172 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T+  L+     +RTGR  PS+L+ V V  YGS VPLNQVANV + + R L+V  ++
Sbjct: 12  RMLKTLESLELGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGIEDSRTLIVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA   AE +K+++RNI
Sbjct: 72  RTMVSAIDKAIRESDLGLNPIT-ADAIRVPLPALTEETRRDMQKVARNEAENAKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M
Sbjct: 131 RRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELM 182


>gi|225437014|ref|XP_002272648.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 280

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 115/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +++K+RM  TI  ++ +  ++RTGR +P++LD V+VE YG+ V L  +A ++  +   L+
Sbjct: 102 KDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLL 161

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  +  +E+ I  S+LGL P  +G+V+R+ +P+ T ERR  L KV     E+ K+
Sbjct: 162 VQPYDKSSLKVIEKAIVSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKV 221

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD +   +K  K  K SED V  L +D+QK+ D  +K I++ +++K+KE++
Sbjct: 222 ALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELL 278


>gi|307566353|ref|ZP_07628792.1| ribosome recycling factor [Prevotella amnii CRIS 21A-A]
 gi|307344930|gb|EFN90328.1| ribosome recycling factor [Prevotella amnii CRIS 21A-A]
          Length = 186

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 113/178 (63%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K+RM   + +L +++  +R GR + ++LD V+V +YG  V LNQVA V V + R +
Sbjct: 8   LKEAKERMNMAVMYLDEELQRIRAGRANVAILDSVRVSSYGQMVSLNQVATVMVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   EK+K
Sbjct: 68  AIKPWDRKAIKDIEKAIMDSDVGITPENNGEMIRLNLPQPTEERRRELVKQCNKIGEKTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I +RN+R D  + LKK+ K G  SED+    E+D+QK+ D  IK ++     K+KE+M
Sbjct: 128 IQIRNVRTDIKEILKKAIKEG-LSEDLEKDAESDLQKVHDKYIKQVEDLLAAKEKEVM 184


>gi|148241959|ref|YP_001227116.1| ribosome recycling factor [Synechococcus sp. RCC307]
 gi|147850269|emb|CAK27763.1| Ribosome recycling factor [Synechococcus sp. RCC307]
          Length = 179

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 113/177 (63%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           +++D M  ++   +++  T+RTGR + S+LD V VE YG+  PL  +A ++  + + + +
Sbjct: 2   DLEDSMSKSLEATQRNFNTIRTGRANTSLLDKVMVEYYGADTPLKSLATISAPDSQTIQI 61

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   +A +E+ I  S+LGL P  +G+++RI +P  TEERR  L K+A  YAE+ K++
Sbjct: 62  QPFDMGSMALIEKAIGMSDLGLTPNNDGKLIRINIPPLTEERRKELCKIASKYAEEGKVA 121

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RN+RRD +D +KK  K G+ SED+    ++ +QK+TD  I +++    +K+ +I+ 
Sbjct: 122 LRNVRRDAIDQIKKREKDGELSEDLSRDEQDKVQKVTDKFIADLEKLLADKEADILK 178


>gi|301165592|emb|CBW25163.1| ribosome recycling factor [Bacteriovorax marinus SJ]
          Length = 185

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/174 (40%), Positives = 104/174 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I  LK  +  +RTGR S S+LD V V+ YGS  P+ QV  ++  E R+L +  +D
Sbjct: 12  QMTKSIDSLKYQLTKVRTGRASASVLDGVHVDYYGSPTPVAQVGQISTPEARLLQIQPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+A++E+ I  +NLGL P  +G ++RIP P  TEERR   VK      E +KI +RN 
Sbjct: 72  KTMIAAIEKAILGANLGLTPSNDGNLIRIPFPALTEERRKEQVKEIKKSGEDAKIGIRNS 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  + +KK+ K+ + SED     + DIQ ITD  +  +D   E K+KE++  
Sbjct: 132 RRDQNEVVKKAEKAKEISEDESKKFQADIQTITDKYVAEVDVIIEAKEKELLSI 185


>gi|258653276|ref|YP_003202432.1| ribosome recycling factor [Nakamurella multipartita DSM 44233]
 gi|258556501|gb|ACV79443.1| ribosome recycling factor [Nakamurella multipartita DSM 44233]
          Length = 185

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 109/180 (60%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L + +++M   +S  K D+ TLRTGR +P+M   ++V+ YG+  P+ Q+A + + E RM
Sbjct: 5   ELFDAEEKMEKAVSVAKDDLATLRTGRANPNMFGRIQVDYYGAPTPITQMAAINIPEARM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
            V+  +D   + +VE+ I +S+LG+NP  +G V+R+  P+ TE+RR  L K A +  E +
Sbjct: 65  AVIKPYDSSQLHAVEKAIRDSDLGVNPTTDGIVIRVVFPQLTEQRRRELGKTARSKGEDA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+S+RNIRR     L K  K G+  ED V   E ++Q+ITD     +D   + K+ E++ 
Sbjct: 125 KVSIRNIRRKCTQVLDKLVKDGEVGEDDVTRAEKELQQITDRYTSQVDEMVKHKEAELLE 184


>gi|72161083|ref|YP_288740.1| ribosome recycling factor [Thermobifida fusca YX]
 gi|123630034|sp|Q47S50|RRF_THEFY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|71914815|gb|AAZ54717.1| ribosome recycling factor [Thermobifida fusca YX]
          Length = 185

 Score =  135 bits (341), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 108/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D  ++RTGR SP+    + VE YG+  P+NQ+A+  V EPRM+
Sbjct: 6   LLEAEEKMEKAVLVTKEDFASIRTGRPSPATFSRITVEYYGAMTPVNQLASFQVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  + ++E+ I ES+LG+NP  +G ++R+  PE +EERR   VKVA   AE  +
Sbjct: 66  IISPYDKAAMPAIEKAIRESDLGVNPSNDGNIIRVVFPELSEERRKEYVKVARNKAEDGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            SVRN+RR   D + K+ K+G+  ED     + ++  +T   +  ID   + K+ E++ 
Sbjct: 126 TSVRNVRRQAKDAIDKAVKAGEIGEDEGHRAQKELDALTQKYVGEIDELLKHKESELLE 184


>gi|15827834|ref|NP_302097.1| ribosome recycling factor [Mycobacterium leprae TN]
 gi|221230311|ref|YP_002503727.1| ribosome recycling factor [Mycobacterium leprae Br4923]
 gi|3122778|sp|O33046|RRF_MYCLE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809523|sp|B8ZRV0|RRF_MYCLB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|2251188|emb|CAB10670.1| ribosome recycling factor [Mycobacterium leprae]
 gi|13093386|emb|CAC30541.1| ribosome recycling factor [Mycobacterium leprae]
 gi|219933418|emb|CAR71685.1| ribosome recycling factor [Mycobacterium leprae Br4923]
          Length = 185

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  ++D+  +RTGR +P M   + ++ YGS  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVSVAREDLSMIRTGRANPGMFSRLVIDYYGSATPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A    E +K
Sbjct: 66  VIKPYDAIQLHAIETAIRNSDLGVNPSNDGTLIRVAVPQLTEERRRELVKQAKCKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRNIRR  M+ L + RK G+A ED V+  E D+ K T   +  ID   + K+ E++
Sbjct: 126 VSVRNIRRKVMEELHRIRKDGEAGEDEVSRAEKDLDKTTHQYVIQIDELVKHKEGELL 183


>gi|296454244|ref|YP_003661387.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183675|gb|ADH00557.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 183

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 109/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K++M  T+   K++   +RTGR +P++L+ + V+ YG+  P+  VA++ V EPR L
Sbjct: 4   IDQAKEQMARTVENTKENFSGIRTGRANPALLNGITVDYYGAPTPIKAVASIGVPEPRTL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ +  S+LG++P  +G V+R+ +PE TE+RR   VK+A   AE  K
Sbjct: 64  SVTPFDASQAGAVEKALRNSDLGISPNRDGNVIRLTMPELTEDRRKEYVKLAKGKAEDGK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRR   + + K+ K G+  ED    L  D+ K+T S    ID+  E K+KEIM 
Sbjct: 124 VAVRNIRRKTKETIDKAVKDGEMGEDEGDRLLKDLDKVTKSVTDEIDTLLETKQKEIME 182


>gi|88798260|ref|ZP_01113846.1| ribosome recycling factor [Reinekea sp. MED297]
 gi|88779036|gb|EAR10225.1| ribosome recycling factor [Reinekea sp. MED297]
          Length = 185

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 102/168 (60%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
            I+ L      +RTGR +P++LD + V+ YG+  P+ QVAN+ V + R L +  W+K MV
Sbjct: 16  AIAALDDAFNKIRTGRANPAILDKISVDYYGTDTPIKQVANIIVEDGRTLSIVPWEKNMV 75

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
             VE+ I +S+LGLNP   G  +RI +P  TEE R   +KVA   AEK+++S+RN RRD 
Sbjct: 76  PEVEKAIMKSDLGLNPATAGSNIRIVMPMLTEETRKEFIKVARGEAEKARVSIRNGRRDA 135

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
              +K+  K  + SED     E DIQK+TD+ I  +D    EK+ ++M
Sbjct: 136 NSAVKELVKEKELSEDEGKRAEEDIQKLTDAAIAQVDKHLTEKEADLM 183


>gi|86131442|ref|ZP_01050040.1| Ribosome recycling factor [Dokdonia donghaensis MED134]
 gi|85817887|gb|EAQ39055.1| Ribosome recycling factor [Dokdonia donghaensis MED134]
          Length = 185

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/174 (43%), Positives = 107/174 (61%), Gaps = 3/174 (1%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M + I+ L K ++T+R G+ SP+ML  + V+ YGS  PL+QVANV   + R + +  
Sbjct: 13  KEAMDNAITHLGKRLLTIRAGKASPAMLQGLMVDYYGSPTPLSQVANVVAPDGRTISIQP 72

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +E+ I   NLG NP+  G+ + I VP  TEERR  LVK A A AE +K+ VR
Sbjct: 73  WEKSIIQEIEKAIINGNLGFNPMNNGESVIINVPPLTEERRKELVKQAKAEAEDAKVGVR 132

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R++  + +K   K   ASED  A+ E DIQK+TD  IK I+     K+ EIM
Sbjct: 133 NDRKNANNDIK---KVDSASEDEKANAEVDIQKLTDIHIKKIEEVLANKETEIM 183


>gi|209526796|ref|ZP_03275317.1| ribosome recycling factor [Arthrospira maxima CS-328]
 gi|209492757|gb|EDZ93091.1| ribosome recycling factor [Arthrospira maxima CS-328]
          Length = 187

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 111/181 (61%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++ L ++++ M   +    +   T+RTGR + S+LD + VE YGS  PL  +A+++  + 
Sbjct: 5   LVKLADVENLMKKALESTGRSFNTIRTGRANASLLDRITVEYYGSPTPLKSLASISTPDA 64

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
             + +  +D+  + ++E+ I  S++GL P  +G V+R+ +P  TE RR   VK+A  YAE
Sbjct: 65  STITIQPFDRNSLNNIEKAISMSDVGLTPNNDGSVVRLNIPPLTEARRQEFVKLAGKYAE 124

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           + ++SVRNIRRD +D ++K  K+G  SED    +++ IQK+TD     +D   E K+K+I
Sbjct: 125 EGRVSVRNIRRDAIDSVRKQEKNGDISEDESRDIQDKIQKLTDKYTAKVDELLEAKEKDI 184

Query: 184 M 184
           M
Sbjct: 185 M 185


>gi|330998184|ref|ZP_08322010.1| ribosome recycling factor [Paraprevotella xylaniphila YIT 11841]
 gi|329568876|gb|EGG50674.1| ribosome recycling factor [Paraprevotella xylaniphila YIT 11841]
          Length = 186

 Score =  135 bits (340), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 106/178 (59%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L + +  +R G+    +LD ++V++YGS VP+N VA V   + R +
Sbjct: 8   LDEAQEKMDMAVMYLDEALAHIRAGKADIRLLDGIRVDSYGSMVPINNVAAVNTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M  ++E+ I +S LG+ P   G+++RI +P  TEERR  L K   A  E +K
Sbjct: 68  AIKPWDKNMFRAIEKAIIDSELGIMPENNGEIIRIGIPPLTEERRKQLAKQCKAECETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKK+ K G A ED   + E  +QK+ D  IK ID  +  K KEIM
Sbjct: 128 VSVRNARRDAIDALKKAVKDGMA-EDEQKNSEAKLQKVHDKYIKQIDDLYAAKDKEIM 184


>gi|262376192|ref|ZP_06069422.1| ribosome recycling factor [Acinetobacter lwoffii SH145]
 gi|262308793|gb|EEY89926.1| ribosome recycling factor [Acinetobacter lwoffii SH145]
          Length = 184

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 108/174 (62%), Gaps = 1/174 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +DRM  T+  L+     +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L++  
Sbjct: 10  EDRMNKTLESLEHGFAKVRTGRAHPSILNNVMVSYYGSDVPLNQVANVGVEDSRTLLIQP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +++ MV+++++ I ES+LGLNPI     +R+P+   TEE R  + KVA   AE +K+++R
Sbjct: 70  FERSMVSAIDKAIRESDLGLNPIT-ADAIRVPMAALTEETRRDMQKVARNEAENAKVAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRRD +  +K   K  + SED      ++IQKITD  +  +D     K+ E+M
Sbjct: 129 NIRRDVLGDIKALLKEKEISEDEERRAADEIQKITDKFVAEVDKRLAAKEAELM 182


>gi|218129178|ref|ZP_03457982.1| hypothetical protein BACEGG_00753 [Bacteroides eggerthii DSM 20697]
 gi|217988556|gb|EEC54876.1| hypothetical protein BACEGG_00753 [Bacteroides eggerthii DSM 20697]
          Length = 212

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 106/178 (59%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 34  LDEAQEKMDMAVMYLEESLAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 93

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K     +E +K
Sbjct: 94  AIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKNESETAK 153

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKKS K G A ED     E  +QKI D  IK ID     K KEIM
Sbjct: 154 VSVRNARRDAIDALKKSVKEGLA-EDAQKGGEEKLQKIHDKYIKQIDDMLAAKDKEIM 210


>gi|167770609|ref|ZP_02442662.1| hypothetical protein ANACOL_01955 [Anaerotruncus colihominis DSM
           17241]
 gi|167667204|gb|EDS11334.1| hypothetical protein ANACOL_01955 [Anaerotruncus colihominis DSM
           17241]
          Length = 184

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M  TI  L+ +   +R GR +P++LD + V+ YG+   +  +A ++V E R+L
Sbjct: 5   LKHYNEKMEKTIRVLENEYSAIRAGRANPAVLDKITVDYYGTPTQIQAMAAISVSEARIL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  +  +E+ I  S++G+NP  +G V+RI  P  TEERR  + K      E SK
Sbjct: 65  VIQPWDKSTLRPIEKAIQASDIGINPTNDGTVIRIVFPPLTEERRKEICKQIKKQGEDSK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  +  K  +KS + SED    LE+ +QK+TD   K ID    +K+KEI+  
Sbjct: 125 VAIRSIRRDANEKFKALKKSSEVSEDEEKDLEDQMQKMTDKFCKRIDEIAAKKEKEILEI 184


>gi|313207473|ref|YP_004046650.1| ribosome recycling factor [Riemerella anatipestifer DSM 15868]
 gi|312446789|gb|ADQ83144.1| ribosome recycling factor [Riemerella anatipestifer DSM 15868]
 gi|315023373|gb|EFT36383.1| Ribosome recycling factor [Riemerella anatipestifer RA-YM]
 gi|325335067|gb|ADZ11341.1| Ribosome recycling factor [Riemerella anatipestifer RA-GD]
          Length = 184

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 104/178 (58%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +  M   I  L+   + +R GR S +M+  V VE YGS  PLNQVANV++ +   +
Sbjct: 8   LDNARQEMDAAIKHLEHAFLKIRAGRASTAMVQDVMVEYYGSPTPLNQVANVSIPDAMTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+  +  +E+GI  SNLG  P   G  + + VP  TEERR  L K A A AE++K
Sbjct: 68  AIQPWDRSAIKDIEKGIINSNLGFAPSNNGDTIILNVPPLTEERRKDLAKQAKAEAEQTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN R+D M  LK   K    SED++   EN++Q++TD  I  ID  ++ K+ +IM
Sbjct: 128 VTVRNARQDAMKDLK---KLDGVSEDIIKDTENEVQQLTDKYISTIDDHYKHKEVDIM 182


>gi|219130047|ref|XP_002185186.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403365|gb|EEC43318.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 173

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 108/173 (62%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++  ++ ++ ++RTGR S  +LD VKV+ YG   PLNQ+A ++V   + L +  +DK
Sbjct: 1   MAKSVDSVRLNLQSVRTGRASAQILDRVKVDYYGVETPLNQMATISVPSAQQLSIDPYDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++E  I ES+LGL    +G ++RI +P  TE+RR  ++K+  +  E+ K++VRNIR
Sbjct: 61  TSLNNIETAIVESDLGLTTNNDGSIIRINIPSMTEDRRKEMLKLCKSIGEEGKVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RDG+D +KK  KS    ED +   ++ +QK+TD  +K ID     K+KE+M  
Sbjct: 121 RDGLDTIKKMEKSSDIGEDEMKDGQDTMQKLTDKNVKEIDEVVGAKEKEVMKV 173


>gi|225552204|ref|ZP_03773144.1| ribosome recycling factor [Borrelia sp. SV1]
 gi|225371202|gb|EEH00632.1| ribosome recycling factor [Borrelia sp. SV1]
          Length = 184

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 108/173 (62%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+  W
Sbjct: 10  EKMSKVLLSLDNEYKTLRTGRISSNIFDRIFIQYHGQRTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS RN
Sbjct: 70  DKSILNKIEQAILNSDLSMNPSGDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKISTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IR+D  + +KK  K  + +ED +  + +DIQK TD  IK IDS  E K +EIM
Sbjct: 130 IRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDMYIKKIDSILESKIQEIM 182


>gi|149277338|ref|ZP_01883480.1| ribosome recycling factor (ribosome releasing factor) [Pedobacter
           sp. BAL39]
 gi|149232215|gb|EDM37592.1| ribosome recycling factor (ribosome releasing factor) [Pedobacter
           sp. BAL39]
          Length = 187

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 114/186 (61%), Gaps = 3/186 (1%)

Query: 1   MNQVI--DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN +I   LQ+ +  M   I   + ++  +R G+ S  MLD + V+ YGS   L+QVA++
Sbjct: 1   MNDLIKKQLQDAQASMDKAIDHCESELTKIRAGKASAGMLDGIFVDYYGSSTGLSQVASI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R L+V  W+K M+  +ER I E+N+G+NP  +G V+R+ VP  TEERR  LVK  
Sbjct: 61  NTPDARTLLVQPWEKNMLVPIERAIMEANIGINPQNDGVVIRLVVPPLTEERRRDLVKKV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AE+ KI+VRNIR+D  + +KK  K    S+D + + E ++QKITD+ I  +D   E 
Sbjct: 121 KEEAERGKITVRNIRKDANEKIKK-LKGESVSDDEIKTGEAEVQKITDAYIIKVDKHAEA 179

Query: 179 KKKEIM 184
           K+K+IM
Sbjct: 180 KEKDIM 185


>gi|149921516|ref|ZP_01909967.1| ribosome recycling factor [Plesiocystis pacifica SIR-1]
 gi|149817591|gb|EDM77059.1| ribosome recycling factor [Plesiocystis pacifica SIR-1]
          Length = 185

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 114/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +D M      L +++  +R GR +P++LD V+VEAYG  + L +VA V+  + R+L
Sbjct: 6   LELAEDAMKSAQERLARELSRVRAGRANPALLDGVRVEAYGVQMSLREVATVSTADARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +D   ++SVE+ I  S LGLNP  +G VLR+P+P  TEERR +LVK     AE++K
Sbjct: 66  IVKPFDANTISSVEKAIMNSGLGLNPSSDGVVLRVPIPPLTEERRRSLVKQVKDQAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++R+ RR+G D LK + K  + SED +    + +Q++T+  +  IDS  ++K+ EIM
Sbjct: 126 IAIRSGRREGNDLLKGAEKDKEISEDELKRGLDKVQELTNRYVAMIDSAVKKKESEIM 183


>gi|226306032|ref|YP_002765992.1| ribosome recycling factor [Rhodococcus erythropolis PR4]
 gi|229491439|ref|ZP_04385263.1| ribosome recycling factor [Rhodococcus erythropolis SK121]
 gi|259494552|sp|C0ZY18|RRF_RHOE4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226185149|dbj|BAH33253.1| ribosome recycling factor [Rhodococcus erythropolis PR4]
 gi|229321724|gb|EEN87521.1| ribosome recycling factor [Rhodococcus erythropolis SK121]
          Length = 185

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 108/175 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   ++  K D+ ++RTGR +P M   + ++ YGS  P+ Q+A++ V E RM++V  
Sbjct: 10  EEKMEKAVTVAKDDLGSVRTGRANPGMFSRIVIDYYGSITPITQLASINVPEARMVIVKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++   + ++E  I  S+LG+NP  +G ++RI VP+ TEERR  LVK A +  E SK+++R
Sbjct: 70  YEASQLNAIETAIRNSDLGVNPSNDGSIIRISVPQLTEERRRELVKQAKSKGEDSKVTLR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR  MD L + +K G+A ED V   E ++ K T   +  ++   + K+ E+M 
Sbjct: 130 NIRRKAMDELGRIQKDGEAGEDEVGRAEKELDKTTAKYVHTVEELVKHKEAELME 184


>gi|317475153|ref|ZP_07934420.1| ribosome recycling factor [Bacteroides eggerthii 1_2_48FAA]
 gi|316908606|gb|EFV30293.1| ribosome recycling factor [Bacteroides eggerthii 1_2_48FAA]
          Length = 186

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 106/178 (59%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 8   LDEAQEKMDMAVMYLEESLAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K     +E +K
Sbjct: 68  AIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKNESETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKKS K G A ED     E  +QKI D  IK ID     K KEIM
Sbjct: 128 VSVRNARRDAIDALKKSVKEGLA-EDAQKGGEEKLQKIHDKYIKQIDDMLAAKDKEIM 184


>gi|238926718|ref|ZP_04658478.1| peptide chain release factor RF4 [Selenomonas flueggei ATCC 43531]
 gi|238885250|gb|EEQ48888.1| peptide chain release factor RF4 [Selenomonas flueggei ATCC 43531]
          Length = 185

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 110/175 (62%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           + M   I  L+++  +LR GR +P++LD V V  YG+   +NQ+A VTV EP M+V++ W
Sbjct: 11  ENMNKAIDVLRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMIVITPW 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +K ++  +E  I +S+LGL+P  +G V+R+ +P+ T+ERR  L+K      E++K+++RN
Sbjct: 71  EKAILHEIEIAISKSDLGLSPNSDGNVIRLAIPQPTQERRKELIKTVGKKTEEAKVALRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IRRD  + +KK  K  + +ED     ++ +QK+ D  +K +D     K+KE+M  
Sbjct: 131 IRRDANEAIKKLEKDKEINEDESKRGQDSVQKLVDKFVKQMDEMRTAKEKEVMEI 185


>gi|108761597|ref|YP_633491.1| ribosome recycling factor [Myxococcus xanthus DK 1622]
 gi|123247456|sp|Q1D1I2|RRF_MYXXD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|108465477|gb|ABF90662.1| ribosome recycling factor [Myxococcus xanthus DK 1622]
          Length = 185

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 112/176 (63%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +K R+  ++  L+ D+  +RTGR S ++L+ V+V+ YG+  PL+ VA+V   EPR++ + 
Sbjct: 9   LKGRIDKSLEGLRTDLTRVRTGRASIAILEGVRVDYYGTPTPLSGVASVNAPEPRLITIK 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            W+K ++  +E+ + E+NLG+NP+ +G+++R+P P  TEERR  + K      E+ K+++
Sbjct: 69  PWEKSVLKDIEKALREANLGINPMNDGEMIRLPFPPLTEERRKDIAKQVKTKGEEFKVTI 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RN+RRD  + LK   K  K +ED    +   +QK TD+ I  +D   ++K+KE+M 
Sbjct: 129 RNLRRDANEVLKTQLKDKKITEDDHKRITEVVQKQTDAGITQVDEIVKKKEKEVME 184


>gi|265765322|ref|ZP_06093597.1| ribosome recycling factor [Bacteroides sp. 2_1_16]
 gi|263254706|gb|EEZ26140.1| ribosome recycling factor [Bacteroides sp. 2_1_16]
          Length = 186

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/185 (38%), Positives = 114/185 (61%), Gaps = 5/185 (2%)

Query: 4   VIDLQNI----KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           ++D++ I    +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT
Sbjct: 1   MVDIKTIIEESQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R + +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   
Sbjct: 61  TPDARSITIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A  E +K+S+RN RRDG+D LKK+ K G A ED   + E  +QK+ D  I  I+    EK
Sbjct: 121 AEGETAKVSIRNARRDGIDALKKAVKDGLA-EDEQKNAEAKLQKVHDKYIAKIEEMLAEK 179

Query: 180 KKEIM 184
            KEIM
Sbjct: 180 DKEIM 184


>gi|315587147|gb|ADU41528.1| ribosome recycling factor [Helicobacter pylori 35A]
          Length = 185

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 108/174 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD +IK ID   + K+  I+
Sbjct: 130 NIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDESIKTIDESVKNKEDAIL 183


>gi|53711978|ref|YP_097970.1| ribosome recycling factor [Bacteroides fragilis YCH46]
 gi|60680182|ref|YP_210326.1| ribosome recycling factor [Bacteroides fragilis NCTC 9343]
 gi|253563986|ref|ZP_04841443.1| ribosome-recycling factor [Bacteroides sp. 3_2_5]
 gi|255007502|ref|ZP_05279628.1| ribosome recycling factor [Bacteroides fragilis 3_1_12]
 gi|313145197|ref|ZP_07807390.1| ribosome recycling factor [Bacteroides fragilis 3_1_12]
 gi|60390242|sp|Q64YJ0|RRF_BACFR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|81316748|sp|Q5LHL2|RRF_BACFN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|52214843|dbj|BAD47436.1| ribosome recycling factor [Bacteroides fragilis YCH46]
 gi|60491616|emb|CAH06368.1| putative ribosome recycling factor [Bacteroides fragilis NCTC 9343]
 gi|251947762|gb|EES88044.1| ribosome-recycling factor [Bacteroides sp. 3_2_5]
 gi|301161707|emb|CBW21247.1| putative ribosome recycling factor [Bacteroides fragilis 638R]
 gi|313133964|gb|EFR51324.1| ribosome recycling factor [Bacteroides fragilis 3_1_12]
          Length = 186

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 110/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   IEESQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   A  E +K
Sbjct: 68  TIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKAEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN RRDG+D LKK+ K G A ED   + E  +QK+ D  I  I+    EK KEIM
Sbjct: 128 VSIRNARRDGIDALKKAVKDGLA-EDEQKNAEAKLQKVHDKYIAKIEEMLAEKDKEIM 184


>gi|224539083|ref|ZP_03679622.1| hypothetical protein BACCELL_03983 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519301|gb|EEF88406.1| hypothetical protein BACCELL_03983 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 186

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 105/178 (58%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA V   + R +
Sbjct: 8   LDEAQEKMDMAVMYLEEALAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVNTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  VIKPWDKSMFKVIEKAIIDSSLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKKS K G A ED     E  +QKI D  IK ID     K KEIM
Sbjct: 128 VSVRNARRDAIDGLKKSVKDGLA-EDAQKGGEEKLQKIHDKYIKQIDDMLAAKDKEIM 184


>gi|212715798|ref|ZP_03323926.1| hypothetical protein BIFCAT_00699 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661165|gb|EEB21740.1| hypothetical protein BIFCAT_00699 [Bifidobacterium catenulatum DSM
           16992]
          Length = 184

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 108/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K +M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V EPR L
Sbjct: 5   VEQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPEPRTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A   AE  K
Sbjct: 65  SVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKGKAEDGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRR   + L K+ K G+  ED    L  ++ K+T  T   +D+  E K+KEIM 
Sbjct: 125 VAVRNIRRKAKESLDKAIKDGEMGEDDGDRLLKELDKVTKQTTDELDTLLEAKQKEIME 183


>gi|237751369|ref|ZP_04581849.1| ribosome releasing factor [Helicobacter bilis ATCC 43879]
 gi|229372735|gb|EEO23126.1| ribosome releasing factor [Helicobacter bilis ATCC 43879]
          Length = 185

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 112/176 (63%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N K+ M  ++  L+KD  TLR+GRVS ++LD ++V+ YG+  PL QV +V   +   +++
Sbjct: 8   NTKEYMQKSLQSLQKDFATLRSGRVSVNILDNIRVDYYGTPTPLAQVGSVIAQDATTIII 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + W+K ++  +E+ I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+KI+
Sbjct: 68  NPWEKPLLKEIEKAIQEANIGVNPNADGECIKLFFPPMTSDQRKDIAKQAKAMGEKAKIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VRNIR+D  + +KK  K    + D      ++IQKITD  IK ID+  + K++E+M
Sbjct: 128 VRNIRQDSNNAIKKLEKDKAITTDESKKGADEIQKITDEHIKKIDNMVKTKEEEVM 183


>gi|121638763|ref|YP_978987.1| ribosome recycling factor [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224991255|ref|YP_002645944.1| ribosome recycling factor [Mycobacterium bovis BCG str. Tokyo 172]
 gi|166230800|sp|A1KMM6|RRF_MYCBP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809522|sp|C1AFZ7|RRF_MYCBT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|121494411|emb|CAL72892.1| Ribosome recycling factor frr [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224774370|dbj|BAH27176.1| ribosome recycling factor [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 185

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 109/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D+ T+RTGR +P M   + ++ YG+   + Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATLITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A    E++K
Sbjct: 66  VIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRNIRR  M+ L + RK G+A ED V   E D+ K T   +  ID   + K+ E++
Sbjct: 126 VSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELL 183


>gi|305665271|ref|YP_003861558.1| ribosome releasing factor [Maribacter sp. HTCC2170]
 gi|88710025|gb|EAR02257.1| ribosome releasing factor [Maribacter sp. HTCC2170]
          Length = 185

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 102/178 (57%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+ M   I+ L+K+ + +R G+ +P+ML  V V+ YGS  PL+QVAN+   + R L
Sbjct: 9   LDATKESMDAAITHLEKEFVKIRAGKANPAMLSSVMVDYYGSQTPLSQVANINTPDGRTL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  W+K M+  +E  I  +NLG NP+  G  + I VP  TEERR+ L K A A AE +K
Sbjct: 69  SVQPWEKNMLQEIETAIMHANLGFNPMNNGDFVIINVPPLTEERRIQLAKQAKAEAEHAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +  RN R++    +K       ASEDM  + E D+Q +TD   K ID F   K+ EIM
Sbjct: 129 VGARNARQEANKEIK---DLDDASEDMKKNAEMDVQDLTDKYSKKIDDFLAAKEAEIM 183


>gi|124022470|ref|YP_001016777.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9303]
 gi|123962756|gb|ABM77512.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9303]
          Length = 173

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 107/171 (62%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   +++  T+RTGR +PS+LD + VE YG+  PL  +A ++  + + + +  +D 
Sbjct: 1   MHKSVEATQRNFATIRTGRANPSLLDRINVEYYGTETPLKSLATISTPDSQTIAIQPFDN 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E+ I  S+LGL P  +G+++RI VP  TEERR    K+A  YAE+ K+++RNIR
Sbjct: 61  GSMGLIEKAIATSDLGLTPNNDGKIIRINVPPLTEERRKEFCKLAAKYAEEGKVALRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +D +KK  K  + S+D     ++ IQK+TD+ I  I+ +  EK+ +I+
Sbjct: 121 RDAIDKVKKLEKDAELSKDQSHDEQDGIQKLTDTFITEIEKYLAEKEADIL 171


>gi|15645870|ref|NP_208048.1| ribosome recycling factor [Helicobacter pylori 26695]
 gi|210135415|ref|YP_002301854.1| ribosome recycling factor [Helicobacter pylori P12]
 gi|3024576|sp|P56398|RRF_HELPY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749931|sp|B6JN96|RRF_HELP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|2314423|gb|AAD08302.1| ribosome releasing factor (frr) [Helicobacter pylori 26695]
 gi|210133383|gb|ACJ08374.1| ribosome releasing factor [Helicobacter pylori P12]
          Length = 185

 Score =  135 bits (339), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTSEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNQVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAIL 183


>gi|242310135|ref|ZP_04809290.1| ribosome recycling factor [Helicobacter pullorum MIT 98-5489]
 gi|239523432|gb|EEQ63298.1| ribosome recycling factor [Helicobacter pullorum MIT 98-5489]
          Length = 186

 Score =  134 bits (338), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 111/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++ M  +I  +KK+  TLR+G+VS ++LD ++++ Y +  PLNQV +V   +   +VV+ 
Sbjct: 11  QETMNKSIEAMKKEFGTLRSGKVSVAILDHIRIDYYDTPTPLNQVGSVIAQDASTIVVTP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A    EK+KI++R
Sbjct: 71  WEKNLLKEIERAIQEANIGVNPNNDGEAIKLFFPPMTSEQRKEIAKEAKNIGEKAKIAIR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  D +KK  K    SED     +++IQK TD+ +K ID   + K++E++
Sbjct: 131 NIRKDSNDKVKKLEKDKTISEDESKKAQDEIQKFTDNAVKKIDELVKHKEEELL 184


>gi|312892397|ref|ZP_07751892.1| ribosome recycling factor [Mucilaginibacter paludis DSM 18603]
 gi|311295181|gb|EFQ72355.1| ribosome recycling factor [Mucilaginibacter paludis DSM 18603]
          Length = 187

 Score =  134 bits (338), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K  M   I     + + +R G+ SP+MLD V VE YG+   + QVA+V   + R L
Sbjct: 9   LTDAKALMEKAIEHTDSEFLKIRAGKASPAMLDGVMVEYYGTPTIITQVASVNSPDARTL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  W+K ++  +ER I E+NLG NP  +G V+RI VP  TEERR  LVK   A AE  K
Sbjct: 69  VVQPWEKTLLGPIERAIMEANLGFNPQNDGIVIRINVPPLTEERRRDLVKRVKAEAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIR+D  + +KK  K+   SED +   E D+QK+ D+ I  ID   + K+K+IM
Sbjct: 129 IALRNIRKDANEKIKK-LKTESVSEDEIKVGEADVQKLVDAYIIKIDQLTDVKEKDIM 185


>gi|224531659|ref|ZP_03672291.1| ribosome recycling factor [Borrelia valaisiana VS116]
 gi|224511124|gb|EEF81530.1| ribosome recycling factor [Borrelia valaisiana VS116]
          Length = 184

 Score =  134 bits (338), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 108/173 (62%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+  W
Sbjct: 10  EKMSKVLLSLDNEYKTLRTGRISSNIFDKIFIQYHGQRTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS RN
Sbjct: 70  DKSILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKISTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IR+D  + +KK  K  + +ED +  + +DIQK TD  IK ID+  E K +EIM
Sbjct: 130 IRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDIYIKKIDTILESKIQEIM 182


>gi|327404464|ref|YP_004345302.1| ribosome recycling factor [Fluviicola taffensis DSM 16823]
 gi|327319972|gb|AEA44464.1| ribosome recycling factor [Fluviicola taffensis DSM 16823]
          Length = 187

 Score =  134 bits (338), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 108/175 (61%), Gaps = 1/175 (0%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +K     +I  L+ +++ +R G+ +PSML  V V+ YGS  P++QV NV  ++ R L V 
Sbjct: 12  LKSSNAKSIDHLENELVKVRAGKATPSMLSGVLVDYYGSPTPIHQVGNVNSMDARTLTVQ 71

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            ++K M+  + +GI  +NLGLNP   G+ L I +P  TEERR  LVK A A AE +K+ +
Sbjct: 72  AFEKNMLNEIAKGIMNANLGLNPQNNGEQLIIQIPLLTEERRRDLVKKARAEAEHAKVGI 131

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RN R+D +D + KS K+   SEDM    E +IQ +T+  IK ID   + K+K+IM
Sbjct: 132 RNNRKDAIDMV-KSLKADGLSEDMTKDAETEIQNLTNGFIKKIDELVDLKEKDIM 185


>gi|189502668|ref|YP_001958385.1| hypothetical protein Aasi_1351 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|238692316|sp|B3ETV4|RRF_AMOA5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189498109|gb|ACE06656.1| hypothetical protein Aasi_1351 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 186

 Score =  134 bits (338), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 1/157 (0%)

Query: 28  LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           +R GR  P MLD + +  Y +  PLNQVA +T  + R LV+  W+++ +  +E+ I  S 
Sbjct: 29  IRAGRAMPDMLDGISILYYNAMTPLNQVAAITTPDARTLVIKPWERKCIQEIEKAIVNSK 88

Query: 88  LGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSG 147
           LGLNP  +G+V+RI VP  TEERR  LVK A   AEK KIS+RNIR+D  +  K  +K G
Sbjct: 89  LGLNPQNDGEVVRIIVPPLTEERRKDLVKQAKNEAEKGKISIRNIRKDIKETFKHLQKDG 148

Query: 148 KASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ASED +   E  +Q +TD  I NID+    K+ EI+
Sbjct: 149 -ASEDTIKRAEEKLQNLTDKHIHNIDNLLTHKEAEIL 184


>gi|58617480|ref|YP_196679.1| ribosome recycling factor [Ehrlichia ruminantium str. Gardel]
 gi|62900774|sp|Q5FG66|RRF_EHRRG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|58417092|emb|CAI28205.1| Ribosome recycling factor [Ehrlichia ruminantium str. Gardel]
          Length = 185

 Score =  134 bits (338), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 109/178 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K+RM  T+S    D+  +RTGR   S+LD + VE YG  V LN +++++V + + L+
Sbjct: 7   QDAKNRMEKTLSVYLSDVDGIRTGRARASVLDGIVVETYGGRVKLNTISSISVSDNKTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWD   V +++  I  SNLG     EG V+R+ VP+ T++ R  LVK+    +E  +I
Sbjct: 67  VKVWDINNVGAIKTAIINSNLGFGFSCEGAVIRLTVPDMTQDMRKNLVKLLGKISEDCRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           S+RNIRRD MD LK  + +   SED +     +IQKITD  IK I+  F  K+KE++H
Sbjct: 127 SIRNIRRDIMDKLKIMQDNKDISEDDLRIAGVEIQKITDEIIKKINDTFLAKEKELLH 184


>gi|304436535|ref|ZP_07396508.1| ribosome recycling factor [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370478|gb|EFM24130.1| ribosome recycling factor [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 185

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 109/173 (63%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   I  L+++  +LR GR +P++LD + V  YG+   +NQ+A VTV EP M+V++ W+K
Sbjct: 13  MSKAIEALRREFSSLRAGRATPNLLDKIMVPYYGTPTSVNQLAKVTVPEPHMIVITPWEK 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +E  I +S+LGL+P  +G V+R+ +P+ T+ERR  L+K      E++K+++RNIR
Sbjct: 73  SILHEIEIAISKSDLGLSPNSDGNVIRLAIPQPTQERRKELIKTVGKKTEEAKVALRNIR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  + +KK  K  + +ED     ++ +QK+ D  +K +D     K+KE+M  
Sbjct: 133 RDANEAIKKLEKDKEINEDESKRGQDSVQKLVDKFVKQMDEMRAAKEKEVMEI 185


>gi|297380436|gb|ADI35323.1| ribosome recycling factor [Helicobacter pylori v225d]
 gi|308062540|gb|ADO04428.1| ribosome recycling factor [Helicobacter pylori Cuz20]
 gi|308064035|gb|ADO05922.1| ribosome recycling factor [Helicobacter pylori Sat464]
 gi|332674059|gb|AEE70876.1| ribosome recycling factor [Helicobacter pylori 83]
          Length = 185

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEDAIL 183


>gi|319957835|ref|YP_004169098.1| ribosome recycling factor [Nitratifractor salsuginis DSM 16511]
 gi|319420239|gb|ADV47349.1| ribosome recycling factor [Nitratifractor salsuginis DSM 16511]
          Length = 185

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 112/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            +  +D M  +I  +K+D  TLRTG+V+  ++D +KV+ YG+  PLNQV NVTV +   +
Sbjct: 6   FEETRDHMDKSIEAMKRDFATLRTGKVTTQIVDNIKVDYYGTPTPLNQVGNVTVTDATTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K M+ ++E+ I E+N+G+NP  +G  +++  P  T E+R  +VK A   AEK+K
Sbjct: 66  AINPWEKSMLPAIEKAIQEANIGVNPNNDGDFIKLFFPPMTVEQRQEIVKQAKQMAEKAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+R++  + +K+     + SED +    + IQK+TD  I  +D   + K+ +I+
Sbjct: 126 VAIRNVRKESNNKIKRLEHDKEISEDEMKRALDQIQKLTDEFIAKVDESLKAKEADIL 183


>gi|308234682|ref|ZP_07665419.1| ribosome recycling factor [Gardnerella vaginalis ATCC 14018]
 gi|311114694|ref|YP_003985915.1| ribosome recycling factor [Gardnerella vaginalis ATCC 14019]
 gi|310946188|gb|ADP38892.1| ribosome recycling factor [Gardnerella vaginalis ATCC 14019]
          Length = 184

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 112/174 (64%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  ++   K++ M +RTGR +P++L+ + V+ YG+  P+  VA++ V EPR L V+ +
Sbjct: 10  EQMNKSVEATKENFMGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGVPEPRTLSVTPF 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D     +VE+ I +S+LG++P  +G V+R+ +PE TE+RR   VK+A   AE+ K++VRN
Sbjct: 70  DASQANAVEKAIRDSDLGVSPNRDGNVIRVTMPELTEDRRKEYVKLAKTKAEEGKVAVRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IRR   +++ KS K G+  ED    L+ ++ K+T     ++D+  + K+KEIM 
Sbjct: 130 IRRKTKENIDKSVKDGEIGEDEGERLQKELDKVTKQVTDSLDALLDGKQKEIME 183


>gi|313204948|ref|YP_004043605.1| ribosome recycling factor [Paludibacter propionicigenes WB4]
 gi|312444264|gb|ADQ80620.1| ribosome recycling factor [Paludibacter propionicigenes WB4]
          Length = 186

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 109/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +D M  T+ FL + +  +R G+ +P +LD V+VE YG  VP++ VA VT  + + +
Sbjct: 8   LKQAEDSMEATLLFLDESLAHIRAGKANPRILDGVRVEYYGQIVPISGVATVTTPDAKTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K ++  +E+ +  S++G+ P+  G+ +R+ +P  TE+RR  L K + A  E +K
Sbjct: 68  TIQPWEKALIPIIEKALLNSDIGITPMNNGETIRLGIPPLTEDRRRQLAKQSKAECEDAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ISVRN RRD ++HLKK  K G   EDM    E  +QKI D  IK I+  +  K+KEIM
Sbjct: 128 ISVRNARRDAIEHLKKMIKEG-LPEDMEKDAEVSVQKIHDKYIKRIEDQYLAKEKEIM 184


>gi|282859177|ref|ZP_06268299.1| ribosome recycling factor [Prevotella bivia JCVIHMP010]
 gi|282587996|gb|EFB93179.1| ribosome recycling factor [Prevotella bivia JCVIHMP010]
          Length = 186

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 110/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KDRM     +L +++  +R GR + ++LD V+V +YG  V LNQVA V V + R +
Sbjct: 8   LSEAKDRMEMAAMYLDEELQRIRAGRANVAILDGVRVSSYGQMVALNQVATVMVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   EK+K
Sbjct: 68  AIKPWDKKAIKDIEKAIMDSDVGITPENNGEMIRLNLPQPTEERRKELVKQCNKIGEKTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I +RNIR D  + LKK+ K G  SED+    E ++QKI D  IK ++     K+KE+M
Sbjct: 128 IQIRNIRADIKEILKKAIKDG-LSEDLEKDAETELQKIHDKYIKRVEELLAAKEKEVM 184


>gi|294790919|ref|ZP_06756077.1| ribosome recycling factor [Scardovia inopinata F0304]
 gi|294458816|gb|EFG27169.1| ribosome recycling factor [Scardovia inopinata F0304]
          Length = 184

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 114/184 (61%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ V+D  + + +M  TI   K++ + +RTGR +P++ + + V+ YG+  PL  +A + V
Sbjct: 1   MSTVVD--DAQKQMNKTIESTKENFVGIRTGRANPALFNGLTVDYYGAPTPLKALATIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V+ +D    A++E+ I +S+LG+NP  +G V+ + +PE TEERR   VK+AH 
Sbjct: 59  TDNRTLAVTPFDVSQSAAIEKAIRDSDLGVNPRRDGNVIHVTLPELTEERRKDYVKLAHE 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           +AEK K++VR+IRR   + ++ + K G   ED    L+ D++K T    + ID+    K+
Sbjct: 119 FAEKGKVAVRSIRRKAKEDIESATKDGDYGEDEGKRLQADLEKATKKATEEIDTLLHTKE 178

Query: 181 KEIM 184
           KEI+
Sbjct: 179 KEIL 182


>gi|111114943|ref|YP_709561.1| ribosome recycling factor [Borrelia afzelii PKo]
 gi|218249310|ref|YP_002374649.1| ribosome recycling factor [Borrelia burgdorferi ZS7]
 gi|123145787|sp|Q0SP43|RRF_BORAP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703255|sp|B7J154|RRF_BORBZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110890217|gb|ABH01385.1| ribosome releasing factor [Borrelia afzelii PKo]
 gi|218164498|gb|ACK74559.1| ribosome recycling factor [Borrelia burgdorferi ZS7]
          Length = 184

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 108/173 (62%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+  W
Sbjct: 10  EKMSKVLLSLDNEYKTLRTGRISSNIFDKIFIQYHGQRTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS RN
Sbjct: 70  DKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKISTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IR+D  + +KK  K  + +ED +  + +DIQK TD  IK ID+  E K +EIM
Sbjct: 130 IRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDIYIKKIDAILESKIQEIM 182


>gi|254526487|ref|ZP_05138539.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9202]
 gi|221537911|gb|EEE40364.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9202]
          Length = 182

 Score =  134 bits (337), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 110/175 (62%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           I++ M  +I   +++  T+RTGR + S+LD V VE YG+  P+  +A ++ ++ + + + 
Sbjct: 6   IQENMNKSIEATQRNFNTIRTGRANASLLDRVSVEYYGAETPIKSLATISTIDSQTISIQ 65

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+++
Sbjct: 66  PFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVAL 125

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRRD +D  KK  K G  S D     +++IQKITD  I  I++   EK+KEI+
Sbjct: 126 RNIRRDAVDKEKKDEKDGLISIDESRDNQSEIQKITDKYIALIETKLSEKEKEIL 180


>gi|42561130|ref|NP_975581.1| ribosome recycling factor [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|331703586|ref|YP_004400273.1| ribosome recycling factor [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|47116994|sp|P61306|RRF_MYCMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|42492627|emb|CAE77223.1| ribosome recycling factor [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|301321457|gb|ADK70100.1| ribosome recycling factor [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
 gi|328802141|emb|CBW54295.1| Ribosome recycling factor [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 182

 Score =  134 bits (337), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 112/178 (62%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+N + +M +TI      +  +RTG+ S ++LD V V  YGS +PLNQ++ +T  EP ++
Sbjct: 6   LKNAELQMKETIDAYVIHLRQIRTGKASGAILDKVMVNYYGSLMPLNQISQITTPEPNLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+ ++      IH+++LGLNP+ +  ++RIP+   TE+ R  LVK  H   E  K
Sbjct: 66  IIKPYDRNVITEAVGAIHKADLGLNPVSDATLIRIPIAPLTEDVRKNLVKKVHKELEGYK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I +RNIRRD +D +KK       S+D+++  E+ IQ+ITD  IK +D   +EK+KE+M
Sbjct: 126 IRIRNIRRDAIDEIKKIE---NISKDLISDNEDQIQQITDKFIKQLDDLTKEKEKELM 180


>gi|42525110|ref|NP_970490.1| hypothetical protein Bd3784 [Bdellovibrio bacteriovorus HD100]
 gi|47116990|sp|P61302|RRF_BDEBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39577321|emb|CAE81144.1| rrf [Bdellovibrio bacteriovorus HD100]
          Length = 186

 Score =  134 bits (337), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  T++ L +++  +RTGR   SMLD ++V  YG+  PL+QVA+++  + +  +
Sbjct: 8   KNAQAKMEKTLNSLSEELKKVRTGRAQVSMLDGIRVNYYGTPSPLSQVASISTPDAKSFL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+  ++  +E+ I +S LG+ P+ +G+V+R+ VP+ TEERR  L K     AE++++
Sbjct: 68  IAPWEVAILKDIEQAIIKSELGMAPMNDGKVIRLKVPDLTEERRKDLAKQVKKIAEEARV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VR  RRD  D +KK +K    SED     E DIQK+TD  IK +D   EEK+K I+  
Sbjct: 128 AVRMARRDANDEVKKLQKDKAVSEDEGKKAEADIQKVTDDFIKKVDQVAEEKEKAILTI 186


>gi|188528045|ref|YP_001910732.1| ribosome recycling factor [Helicobacter pylori Shi470]
 gi|238691946|sp|B2UV20|RRF_HELPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|188144285|gb|ACD48702.1| ribosome recycling factor [Helicobacter pylori Shi470]
          Length = 185

 Score =  134 bits (337), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTTLNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEDAIL 183


>gi|284992372|ref|YP_003410926.1| ribosome recycling factor [Geodermatophilus obscurus DSM 43160]
 gi|284065617|gb|ADB76555.1| ribosome recycling factor [Geodermatophilus obscurus DSM 43160]
          Length = 185

 Score =  134 bits (337), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 113/179 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   +S  ++D+ ++RTGR +PSM + + V+ YG+  P+ Q++++TV E RM 
Sbjct: 6   LLDAEERMDKALSVAREDLGSVRTGRAAPSMFNKILVDYYGAPTPVPQMSSITVPEARMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   ++++E+ I +S+LG+NP  +GQ++R+  P+ TEERR  LVK A A  E +K
Sbjct: 66  VIKPYDTGQLSAIEKAIRDSDLGVNPTNDGQIIRVVFPQLTEERRRDLVKQARAKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RR   + L +  K G+A ED V   E ++  +T      ID   + K+ E++ 
Sbjct: 126 VAIRNVRRRAKEELDRIAKDGEAGEDDVRRAEKELDDLTAKHTHGIDEAVKNKENELLE 184


>gi|255530032|ref|YP_003090404.1| ribosome recycling factor [Pedobacter heparinus DSM 2366]
 gi|255343016|gb|ACU02342.1| ribosome recycling factor [Pedobacter heparinus DSM 2366]
          Length = 187

 Score =  134 bits (337), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 115/186 (61%), Gaps = 3/186 (1%)

Query: 1   MNQVI--DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN +I   LQ+ +  M   I   + ++  +R G+ S  MLD + V+ YG+  PL+QVA++
Sbjct: 1   MNDLIKKQLQDAQATMEKAILHCEAELTKIRAGKASAGMLDGIMVDYYGNPTPLSQVASI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R L+V  W+K ++  +ER I E+N+G+NP  +G V+R+ VP  TEERR  LVK  
Sbjct: 61  NTPDARTLIVQPWEKTLLTPIERAIMEANIGINPQNDGIVIRLVVPPLTEERRKDLVKKV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AE+ +I+VRNIR+D  + +KK  K    S+D + + E ++QKITD+ I  +D   E 
Sbjct: 121 KEEAERGRITVRNIRKDANEKIKKL-KGESVSDDEIKTGEAEVQKITDAYIIKVDKHAEA 179

Query: 179 KKKEIM 184
           K+K+IM
Sbjct: 180 KEKDIM 185


>gi|317180982|dbj|BAJ58768.1| ribosome recycling factor [Helicobacter pylori F32]
          Length = 185

 Score =  134 bits (337), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAIL 183


>gi|256384088|gb|ACU78658.1| ribosome recycling factor [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384920|gb|ACU79489.1| ribosome recycling factor [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455804|gb|ADH22039.1| ribosome recycling factor [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 182

 Score =  134 bits (337), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 112/178 (62%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+N + +M +TI      +  +RTG+ S ++LD V V  YGS +PLNQ++ +T  EP ++
Sbjct: 6   LKNAELQMRETIDAYVIHLRQIRTGKASGAILDKVMVNYYGSLMPLNQISQITTPEPNLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+ ++      IH+++LGLNP+ +  ++RIP+   TE+ R  LVK  H   E  K
Sbjct: 66  IIKPYDRNVITEAVGAIHKADLGLNPVSDATLIRIPIAPLTEDVRKNLVKKVHKELEGYK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I +RNIRRD +D +KK       S+D+++  E+ IQ+ITD  IK +D   +EK+KE+M
Sbjct: 126 IRIRNIRRDAIDEIKKIE---NISKDLISDNEDQIQQITDKFIKQLDDLTKEKEKELM 180


>gi|216263749|ref|ZP_03435743.1| ribosome recycling factor [Borrelia afzelii ACA-1]
 gi|215979793|gb|EEC20615.1| ribosome recycling factor [Borrelia afzelii ACA-1]
          Length = 184

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 108/173 (62%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+  W
Sbjct: 10  EKMSKVLLSLDNEYKTLRTGRISSNIFDKIFIQYHGQKTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS RN
Sbjct: 70  DKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKISTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IR+D  + +KK  K  + +ED +  + +DIQK TD  IK ID+  E K +EIM
Sbjct: 130 IRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDIYIKKIDAILESKIQEIM 182


>gi|254797264|ref|YP_003082106.1| ribosome recycling factor [Neorickettsia risticii str. Illinois]
 gi|254590506|gb|ACT69868.1| ribosome recycling factor [Neorickettsia risticii str. Illinois]
          Length = 185

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++   D++  +      D+  +R+G +S S+LD V V  +   + LNQVA+++V+  +ML
Sbjct: 6   IKETNDKLRSSYEVFLSDLKGIRSGSLSVSILDGVIVSTHMGKLRLNQVASLSVVNNKML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWDK  V +V+  I  SNLG+NPIVEG VLR+PVP+ TEERR  LVKV   Y +++K
Sbjct: 66  SVQVWDKSTVGAVKDAILTSNLGMNPIVEGSVLRLPVPDLTEERRKELVKVLKKYGDRAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD +  +K   K+ + SED + +L   I KI       ID    +K+ +I+
Sbjct: 126 VAVRNIRRDAVSRIKVLEKAKEISEDDMHALLKKIDKIVSEEDARIDDAVSKKENDIL 183


>gi|313665273|ref|YP_004047144.1| ribosome recycling factor [Mycoplasma leachii PG50]
 gi|312949294|gb|ADR23890.1| ribosome recycling factor [Mycoplasma leachii PG50]
          Length = 182

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 112/180 (62%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+N + +M +TI      +  +RTG+ S ++LD V V  YGS +PLNQ++ +T  EP ++
Sbjct: 6   LKNAELQMKETIDAYVIHLRQIRTGKASGAILDKVMVNYYGSLMPLNQISQITTPEPNLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+ ++      IH+++LGLNP+ +  ++RIP+   TE+ R  LVK  H   E  K
Sbjct: 66  IIKPYDRNVITEAVGAIHKADLGLNPVSDATLIRIPIAPLTEDVRKNLVKKVHKELEGYK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +RNIRRD +D +KK       S+D+++  E+ IQ+ITD  IK +D   +EK+KE+M  
Sbjct: 126 IRIRNIRRDAIDEIKKIE---NISKDLISDNEDKIQQITDKFIKQLDDLTKEKEKELMKI 182


>gi|15594466|ref|NP_212255.1| ribosome recycling factor [Borrelia burgdorferi B31]
 gi|226321968|ref|ZP_03797493.1| ribosome recycling factor [Borrelia burgdorferi Bol26]
 gi|3914875|sp|O51147|RRF_BORBU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|2688011|gb|AAC66513.1| ribosome releasing factor (frr) [Borrelia burgdorferi B31]
 gi|226232558|gb|EEH31312.1| ribosome recycling factor [Borrelia burgdorferi Bol26]
          Length = 184

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 107/173 (61%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR+S ++ D + ++ +    P+ QV+++ + E R++V+  W
Sbjct: 10  EKMNKVLLSLDNEYKTLRTGRISSNIFDRICIQYHDRRTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS RN
Sbjct: 70  DKSILNKIEQAILNSDLSMNPSNDGSVIRIKVPNLTSERRQEIVKHAKKIAEEHKISTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IR+D  + +KK  K  + +ED +  + +DIQK TD  IK IDS  E K +EIM
Sbjct: 130 IRQDLNNKVKKQEKESEITEDCLKRILDDIQKSTDMYIKKIDSILESKIQEIM 182


>gi|83319658|ref|YP_424359.1| ribosome recycling factor [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|123535777|sp|Q2SSA4|RRF_MYCCT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|83283544|gb|ABC01476.1| ribosome recycling factor [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 182

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 112/178 (62%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+N + +M +TI      +  +RTG+ S ++LD V V  YGS +PLNQ++ +T  EP ++
Sbjct: 6   LKNAELQMKETIDAYVIHLRQIRTGKASGAILDKVMVNYYGSLMPLNQISQITTPEPNLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+ ++      IH+++LGLNPI +  ++RIP+   TE+ R  LVK  H   E  K
Sbjct: 66  IIKPYDRNVITEAVGAIHKADLGLNPISDATLIRIPIAPLTEDVRKNLVKKVHKELEGYK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I +RNIRRD +D +KK       S+D+++  E+ IQ+ITD  IK +D   +EK++E+M
Sbjct: 126 IRIRNIRRDAIDEIKKVE---NISKDLISDNEDKIQQITDKFIKQLDDLTKEKERELM 180


>gi|123968112|ref|YP_001008970.1| ribosome recycling factor [Prochlorococcus marinus str. AS9601]
 gi|166230817|sp|A2BQ02|RRF_PROMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123198222|gb|ABM69863.1| Ribosome recycling factor [Prochlorococcus marinus str. AS9601]
          Length = 182

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 68/175 (38%), Positives = 110/175 (62%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           I++ M  +I   +++  T+RTGR + S+LD V VE YG+  P+  +A ++ ++ + + + 
Sbjct: 6   IQENMNKSIEATQRNFNTIRTGRANASLLDRVSVEYYGAETPIKSLATISTVDSQTISIQ 65

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+++
Sbjct: 66  PFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVAL 125

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRRD +D  KK  K G  S D     +++IQKITD  I  I++   EK+KEI+
Sbjct: 126 RNIRRDAVDKEKKDEKDGLISIDESRDNQSEIQKITDKYIALIETKLSEKEKEIL 180


>gi|223889153|ref|ZP_03623742.1| ribosome recycling factor [Borrelia burgdorferi 64b]
 gi|223885402|gb|EEF56503.1| ribosome recycling factor [Borrelia burgdorferi 64b]
          Length = 184

 Score =  134 bits (337), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 107/173 (61%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR+S ++ D + ++ +    P+ QV+++ + E R++V+  W
Sbjct: 10  EKMNKVLLSLDNEYKTLRTGRISSNIFDRICIQYHDRRTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS RN
Sbjct: 70  DKSILNKIEQAILNSDLSMNPSNDGSVIRIKVPNLTSERRQEIVKHAKKIAEEHKISTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IR+D  + +KK  K  + +ED +  + +DIQK TD  IK IDS  E K +EIM
Sbjct: 130 IRQDLNNKVKKQEKESEITEDCLKRILDDIQKSTDMYIKKIDSILESKIQEIM 182


>gi|154175389|ref|YP_001409189.1| ribosome recycling factor [Campylobacter curvus 525.92]
 gi|166230772|sp|A7H147|RRF_CAMC5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|112803518|gb|EAU00862.1| ribosome recycling factor [Campylobacter curvus 525.92]
          Length = 185

 Score =  134 bits (336), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 111/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N V   Q  KD     I+ LK+D  TLRTG+V+ S+LD V ++ YGS  PLNQVA V  
Sbjct: 2   LNDVYAAQ--KDGCEKAIASLKRDFTTLRTGKVNISILDHVMIDYYGSMTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++   I  +N+G+NP  +G+ +++  P  T E+R    K A A
Sbjct: 60  SDASTISITPWEKSMIKTISGAIQAANIGVNPNSDGECVKLFFPPMTIEQRQENAKHAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+SVRN+R+D  D +KK  K    +ED     ++++QKITD  +  ID+  +EK+
Sbjct: 120 MGEKAKVSVRNVRKDANDEVKKLEKDKAITEDESKKGQDEVQKITDGYVAKIDALVKEKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 AELL 183


>gi|207091619|ref|ZP_03239406.1| ribosome recycling factor [Helicobacter pylori HPKX_438_AG0C1]
          Length = 185

 Score =  134 bits (336), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K M+  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNMLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R+D  + +KK  K  + SED     +  IQKITD +IK ID   + K+  I+
Sbjct: 130 NTRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDESIKKIDESVKNKEDAIL 183


>gi|260899614|ref|ZP_05908009.1| ribosome recycling factor [Vibrio parahaemolyticus AQ4037]
 gi|308110171|gb|EFO47711.1| ribosome recycling factor [Vibrio parahaemolyticus AQ4037]
          Length = 156

 Score =  134 bits (336), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 65/145 (44%), Positives = 95/145 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAATPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASED 152
           +VRNIRRD  + LK   K  + SED
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISED 151


>gi|145224703|ref|YP_001135381.1| ribosome recycling factor [Mycobacterium gilvum PYR-GCK]
 gi|315445033|ref|YP_004077912.1| ribosome recycling factor [Mycobacterium sp. Spyr1]
 gi|189044062|sp|A4TC77|RRF_MYCGI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145217189|gb|ABP46593.1| ribosome recycling factor [Mycobacterium gilvum PYR-GCK]
 gi|315263336|gb|ADU00078.1| ribosome recycling factor [Mycobacterium sp. Spyr1]
          Length = 185

 Score =  134 bits (336), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 108/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  + D+ ++RTGR +P M + + ++ YG+  P+ Q++++ V E RM+
Sbjct: 6   LFDAEEKMEKAVSVARDDLASIRTGRANPGMFNRIHIDYYGASTPITQLSSINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   +  +E  I  S+LG+NP  +G ++R+ +P+ TEERR  LVK A +  E +K
Sbjct: 66  VIKPYEANQLRPIEDAIRNSDLGVNPTNDGNIIRVSIPQLTEERRRDLVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRR  M+ L + +K G A ED V   E D+ K T      +D   + K+ E++
Sbjct: 126 VSIRNIRRKAMEELARIKKDGDAGEDDVTRAEKDLDKSTHQYTSQVDDLVKHKEGELL 183


>gi|33519739|ref|NP_878571.1| ribosome recycling factor [Candidatus Blochmannia floridanus]
 gi|39932111|sp|Q7VRE3|RRF_BLOFL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33504084|emb|CAD83345.1| ribosome recycling factor [Candidatus Blochmannia floridanus]
          Length = 188

 Score =  134 bits (336), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 111/188 (59%), Gaps = 2/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M+ +ID   +++   M   I   K ++  +  GR+SP +L  +K+E YG   PL Q+ N 
Sbjct: 1   MSDIIDDFQKDVTINMQKCIDNFKININKIHVGRISPDILSFIKIEYYGVITPLCQLTNT 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
            V +PR L+++V+D  M+  +E+ I ESNLG  P+  G  +R+  P  TE RR +L+K+ 
Sbjct: 61  VVEQPRTLIITVFDSSMIKFIEKAILESNLGCTPVSTGNTIRVTFPTLTESRRYSLIKMV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            + +EKSK+ +RNIRR   D LK   ++ + ++D     +N+IQ +TD  IK I    +E
Sbjct: 121 RSESEKSKVLIRNIRRVSNDKLKTFLRNKEINKDNEHYFQNEIQNLTDIWIKKIILITKE 180

Query: 179 KKKEIMHF 186
           K+ E+M F
Sbjct: 181 KELELMKF 188


>gi|270294558|ref|ZP_06200760.1| ribosome recycling factor [Bacteroides sp. D20]
 gi|270276025|gb|EFA21885.1| ribosome recycling factor [Bacteroides sp. D20]
          Length = 200

 Score =  134 bits (336), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 103/178 (57%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ M   I +L + +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 22  LDEAQESMDMAIMYLDEALAHIRAGKADIRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 81

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 82  AIKPWDKSMFRVIEKAIIDSSLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 141

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKKS K G A ED     E  +QKI D  IK ID     K KEIM
Sbjct: 142 VSVRNARRDAIDALKKSVKDGLA-EDAQKGGEEKLQKIHDKFIKQIDDMLAAKDKEIM 198


>gi|160891315|ref|ZP_02072318.1| hypothetical protein BACUNI_03764 [Bacteroides uniformis ATCC 8492]
 gi|317481183|ref|ZP_07940258.1| ribosome recycling factor [Bacteroides sp. 4_1_36]
 gi|156859536|gb|EDO52967.1| hypothetical protein BACUNI_03764 [Bacteroides uniformis ATCC 8492]
 gi|316902679|gb|EFV24558.1| ribosome recycling factor [Bacteroides sp. 4_1_36]
          Length = 186

 Score =  134 bits (336), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 103/178 (57%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ M   I +L + +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 8   LDEAQESMDMAIMYLDEALAHIRAGKADIRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRVIEKAIIDSSLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKKS K G A ED     E  +QKI D  IK ID     K KEIM
Sbjct: 128 VSVRNARRDAIDALKKSVKDGLA-EDAQKGGEEKLQKIHDKFIKQIDDMLAAKDKEIM 184


>gi|332880823|ref|ZP_08448494.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332681206|gb|EGJ54132.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 186

 Score =  134 bits (336), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 105/178 (58%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L + +  +R G+    +LD ++V++YGS VP+N VA V   + R +
Sbjct: 8   LDEAQEKMDMAVMYLDEALAHIRAGKADIRLLDGIRVDSYGSMVPINNVAAVNTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S LG+ P   G+++RI +P  TEERR  L K   A  E +K
Sbjct: 68  AIKPWDKNMFRVIEKAIIDSELGIMPENNGEIIRIGIPPLTEERRKQLAKQCKAECETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKK+ K G A ED   + E  +QK+ D  IK ID  +  K KEIM
Sbjct: 128 VSVRNARRDAIDALKKAVKDGMA-EDEQKNSEAKLQKVHDKYIKQIDDLYAAKDKEIM 184


>gi|329957499|ref|ZP_08297974.1| ribosome recycling factor [Bacteroides clarus YIT 12056]
 gi|328522376|gb|EGF49485.1| ribosome recycling factor [Bacteroides clarus YIT 12056]
          Length = 186

 Score =  134 bits (336), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 105/178 (58%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 8   LDEAQEKMDMAVMYLEESLAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K     +E +K
Sbjct: 68  AIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKNESETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D  KKS K G A ED     E  +QKI D  IK ID     K KEIM
Sbjct: 128 VSVRNARRDAIDAFKKSVKEGLA-EDAQKGGEEKLQKIHDKYIKQIDDMLAAKDKEIM 184


>gi|33861078|ref|NP_892639.1| ribosome recycling factor [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|39932081|sp|Q7V2F9|RRF_PROMP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33639810|emb|CAE18980.1| Ribosome recycling factor [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 182

 Score =  134 bits (336), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 111/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I+  M  ++   +++  T+RTGR + S+LD + VE YG+  P+  +A+++ ++ + + 
Sbjct: 4   QEIQSSMNKSVEATQRNFNTIRTGRANASLLDRISVEYYGAETPIKSLASISTIDSQTIS 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISSLQTIEKAISVSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD +D  KK  K G  S+D+    + +IQK TD  I  I++   EK+KEI+
Sbjct: 124 ALRNIRRDAVDKEKKDEKEGLISKDVSRDNQLEIQKFTDKYISLIETKLSEKEKEIL 180


>gi|157164672|ref|YP_001467726.1| ribosome recycling factor [Campylobacter concisus 13826]
 gi|166230771|sp|A7ZG18|RRF_CAMC1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|112800347|gb|EAT97691.1| ribosome recycling factor [Campylobacter concisus 13826]
          Length = 185

 Score =  134 bits (336), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 113/186 (60%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ D Q  K+     I+ LK+D  TLRTG+V+ ++LD V V+ YGS  PLNQVA V  
Sbjct: 2   LNKIYDTQ--KEGCEKAIASLKRDFTTLRTGKVNINILDNVMVDYYGSPTPLNQVATVLT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++   I  +N+G+NP  +G+ +++  P  T E+R    K A A
Sbjct: 60  SDASTIAITPWEKSMIKAISSAIQAANIGVNPNSDGESVKLFFPPMTVEQRQENAKHAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RN+R+D  D +KK  K    +ED     ++++QKITD+    ID+  +EK+
Sbjct: 120 MGEKAKVSIRNVRKDANDEVKKLEKDKAITEDESKKGQDEVQKITDTYTAKIDTLVKEKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 AELLKI 185


>gi|297559222|ref|YP_003678196.1| ribosome recycling factor [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843670|gb|ADH65690.1| ribosome recycling factor [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 185

 Score =  134 bits (336), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 109/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K+D  T+RTGR +P+  + + V+ YG+  P+NQ+A+ +V EPRM+
Sbjct: 6   LLEAEEKMEKAVTVAKEDFATIRTGRPTPATFNKITVDYYGARTPINQLASFSVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +D      +   I  S+LG+NP  +GQV+R+  PE +EERR   VKVA   AE SK
Sbjct: 66  VISPFDVNSRTDIINAIRNSDLGVNPSDDGQVIRVVFPELSEERRKEYVKVARTKAEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RN+RR   D  +K+ KSG   ED     + ++ +++   + ++D   + K+ E++ 
Sbjct: 126 VSIRNVRRRAKDTFEKAVKSGDIGEDEAHRAQAELDELSSKYVASVDELLKHKESELLE 184


>gi|289643662|ref|ZP_06475775.1| ribosome recycling factor [Frankia symbiont of Datisca glomerata]
 gi|289506553|gb|EFD27539.1| ribosome recycling factor [Frankia symbiont of Datisca glomerata]
          Length = 185

 Score =  133 bits (335), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 111/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K+D   +RTGR++PS+   V V+ YG+  P+NQ+A+  + EPRM+
Sbjct: 6   LLEAEEKMDKAVAVAKEDFANIRTGRITPSVFSKVLVDYYGAPTPVNQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A++E+ + +S+LG+NP  +G ++R   PE +E+RR  L KVA   AE+++
Sbjct: 66  IITPYDKGSLAAIEKAVRDSDLGVNPSNDGTIIRCLFPELSEQRRRDLAKVARTKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IS+RN+RR   D + +  + G+A ED     E D+ + T   +  +D     K+ E++
Sbjct: 126 ISIRNVRRHSKDAIDRIVRDGEAGEDEGRRGEKDLDEATHRYVSQVDELLRHKESELL 183


>gi|167765030|ref|ZP_02437151.1| hypothetical protein BACSTE_03424 [Bacteroides stercoris ATCC
           43183]
 gi|167697699|gb|EDS14278.1| hypothetical protein BACSTE_03424 [Bacteroides stercoris ATCC
           43183]
          Length = 186

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 105/178 (58%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 8   LDEAQEKMDMAVMYLEESLAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K     +E +K
Sbjct: 68  AIKPWDKSMFRIIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKNESETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D  KKS K G A ED     E  +QKI D  IK ID     K KEIM
Sbjct: 128 VSVRNARRDAIDAFKKSVKEGLA-EDAQKGGEEKLQKIHDKYIKQIDDMLAAKDKEIM 184


>gi|254508643|ref|ZP_05120758.1| ribosome recycling factor [Vibrio parahaemolyticus 16]
 gi|219548400|gb|EED25410.1| ribosome recycling factor [Vibrio parahaemolyticus 16]
          Length = 151

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/150 (44%), Positives = 95/150 (63%)

Query: 36  SMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVE 95
           S+L  + VE YG+  PLNQVANV   + R L ++V+DKE+   VE+ I  S+LGLNP+  
Sbjct: 1   SLLAGISVEYYGAPTPLNQVANVVAEDARTLAITVFDKELTQKVEKAIMMSDLGLNPMSA 60

Query: 96  GQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
           G ++R+P+P  TEERR  LVK+    AE  ++++RNIRRD    LK   K  + SED   
Sbjct: 61  GTIIRVPLPPLTEERRKDLVKIVRGEAEGGRVAIRNIRRDANGELKALLKDKEISEDEDR 120

Query: 156 SLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
             + +IQK+TD+ +K +D     K+KE+M 
Sbjct: 121 KGQEEIQKLTDAAVKQVDEVLAAKEKELME 150


>gi|313836793|gb|EFS74507.1| ribosome recycling factor [Propionibacterium acnes HL037PA2]
 gi|314929799|gb|EFS93630.1| ribosome recycling factor [Propionibacterium acnes HL044PA1]
 gi|314972228|gb|EFT16325.1| ribosome recycling factor [Propionibacterium acnes HL037PA3]
 gi|328907655|gb|EGG27419.1| ribosome recycling factor [Propionibacterium sp. P08]
          Length = 184

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ + +MG  +   +++   +RTGR +P+M + + VE YG+  PL Q+A+  V E R +
Sbjct: 5   IKDAEKKMGSAVGHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQVPEARTV 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  V  VE+ I +S+LG+NP  +G V+R  +P  TEERR   +K+A   AE+ +
Sbjct: 65  LIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKAEEGR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRR   D +KK  K  + SED +  LE ++ ++T   ++ ID   + K+ E++  
Sbjct: 125 IAVRNIRRASNDVVKKQEKDKEISEDEMTRLEKELDQVTRKYVEQIDELLKSKESELLEI 184


>gi|195941859|ref|ZP_03087241.1| ribosome releasing factor (frr) [Borrelia burgdorferi 80a]
 gi|216264175|ref|ZP_03436167.1| ribosome recycling factor [Borrelia burgdorferi 156a]
 gi|221217383|ref|ZP_03588854.1| ribosome recycling factor [Borrelia burgdorferi 72a]
 gi|224532925|ref|ZP_03673535.1| ribosome recycling factor [Borrelia burgdorferi WI91-23]
 gi|224533972|ref|ZP_03674556.1| ribosome recycling factor [Borrelia burgdorferi CA-11.2a]
 gi|225549303|ref|ZP_03770276.1| ribosome recycling factor [Borrelia burgdorferi 94a]
 gi|225549848|ref|ZP_03770810.1| ribosome recycling factor [Borrelia burgdorferi 118a]
 gi|226320687|ref|ZP_03796245.1| ribosome recycling factor [Borrelia burgdorferi 29805]
 gi|215980648|gb|EEC21455.1| ribosome recycling factor [Borrelia burgdorferi 156a]
 gi|221192661|gb|EEE18877.1| ribosome recycling factor [Borrelia burgdorferi 72a]
 gi|224512124|gb|EEF82515.1| ribosome recycling factor [Borrelia burgdorferi WI91-23]
 gi|224512808|gb|EEF83175.1| ribosome recycling factor [Borrelia burgdorferi CA-11.2a]
 gi|225369539|gb|EEG98990.1| ribosome recycling factor [Borrelia burgdorferi 118a]
 gi|225370161|gb|EEG99601.1| ribosome recycling factor [Borrelia burgdorferi 94a]
 gi|226233903|gb|EEH32626.1| ribosome recycling factor [Borrelia burgdorferi 29805]
 gi|312148392|gb|ADQ31051.1| ribosome recycling factor [Borrelia burgdorferi JD1]
 gi|312149152|gb|ADQ29223.1| ribosome recycling factor [Borrelia burgdorferi N40]
          Length = 184

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 107/173 (61%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR+S ++ D + ++ +    P+ QV+++ + E R++V+  W
Sbjct: 10  EKMNKVLLSLDNEYKTLRTGRISSNIFDRICIQYHDRRTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS RN
Sbjct: 70  DKSILNKIEQAILNSDLSMNPSNDGSVIRIKVPNLTSERRQEIVKHAKKIAEEHKISTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IR+D  + +KK  K  + +ED +  + +DIQK TD  IK IDS  E K +EIM
Sbjct: 130 IRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDMYIKKIDSILESKIQEIM 182


>gi|254421634|ref|ZP_05035352.1| ribosome recycling factor [Synechococcus sp. PCC 7335]
 gi|196189123|gb|EDX84087.1| ribosome recycling factor [Synechococcus sp. PCC 7335]
          Length = 185

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 107/181 (59%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           ++ DL  ++  M   +   K+   T+RTGR S S+LD + V+ YGS   L  +AN+T  +
Sbjct: 2   KLADLGEVESAMQKAVESTKRAFNTIRTGRASASLLDRIMVDYYGSPTSLKSLANITTPD 61

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
              L++  +D   V  + + I  S++GL P  +G ++R+ +P  T ERR    K+A  YA
Sbjct: 62  ASTLMIQAFDPSSVQLIAKAISMSDVGLVPNTDGALIRLNIPPLTTERRQEFAKLAGKYA 121

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E+ ++SVRN+RRDG+D  KK  K G+ SED    +++++QK+TD   K ID    +K+K 
Sbjct: 122 EEGRVSVRNVRRDGIDLAKKQEKDGEISEDESRDMQDEVQKLTDKYTKQIDEALADKEKA 181

Query: 183 I 183
           I
Sbjct: 182 I 182


>gi|108563625|ref|YP_627941.1| ribosome recycling factor [Helicobacter pylori HPAG1]
 gi|123246899|sp|Q1CS05|RRF_HELPH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|107837398|gb|ABF85267.1| ribosome releasing factor [Helicobacter pylori HPAG1]
          Length = 185

 Score =  133 bits (335), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  ++  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSVQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAIL 183


>gi|78778906|ref|YP_397018.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9312]
 gi|123554500|sp|Q31C13|RRF_PROM9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78712405|gb|ABB49582.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9312]
          Length = 182

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 111/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I++ M  +I   +++  T+RTGR + S+LD + VE YG+  P+  +A ++ ++ + + 
Sbjct: 4   QEIQENMNKSIEATQRNFNTIRTGRANASLLDRISVEYYGAETPIKSLATISTVDSQTIS 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD +D  KK  K G  S D     +++IQKIT+  I  I++   EK+KEI+
Sbjct: 124 ALRNIRRDAVDKEKKDEKDGLISIDESRDNQSEIQKITNKFIALIETKLSEKEKEIL 180


>gi|88607028|ref|YP_504740.1| ribosome recycling factor [Anaplasma phagocytophilum HZ]
 gi|88598091|gb|ABD43561.1| ribosome recycling factor [Anaplasma phagocytophilum HZ]
          Length = 184

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/177 (40%), Positives = 109/177 (61%), Gaps = 1/177 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  ++RM  T +    D+  +RTGRVS S+LD + V  YG+ V LN V++++V   R L+
Sbjct: 8   QYAQERMDKTYAMFLNDISGIRTGRVSASLLDGISVSYYGNKVKLNTVSSISV-NGRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VS+WD  ++  V+  I  SN+G     E   +R+ VPE T + R  LVK+ +  AE+SK+
Sbjct: 67  VSLWDASILGEVKSAIEASNMGFGMTCESSTVRLVVPELTNDVRKNLVKMLNKLAEESKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRD ++ LK  + + + SED +  +  +IQKITDS IK I   +  K+ EI+
Sbjct: 127 SIRNIRRDAIERLKSLQDNKEISEDDMHGVSAEIQKITDSFIKKIADAYTSKESEIL 183


>gi|30249677|ref|NP_841747.1| ribosome recycling factor [Nitrosomonas europaea ATCC 19718]
 gi|34924908|sp|Q82TZ8|RRF_NITEU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|30180714|emb|CAD85626.1| Ribosome recycling factor [Nitrosomonas europaea ATCC 19718]
          Length = 185

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 108/172 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  ++  LK D   +R+GR    +LD + V+ YG+  P+ Q+ANVT+ + R + +  WD
Sbjct: 12  KMQKSLDALKVDFSKVRSGRPHTGLLDHIMVDYYGTPTPIKQLANVTLADARTIGIIPWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K++ +++E+ I +S+LGLNP+    ++R+P+P  TEERR  L K+    AE +++++RNI
Sbjct: 72  KKIFSAIEKAIRDSDLGLNPMTVSDMVRVPMPPLTEERRKDLTKIVKTEAEAARVAMRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD   HLK+  K    +ED     +++IQK+TD  I  +D   + K+ E+M
Sbjct: 132 RRDANAHLKELLKDKLIAEDEDRRAQDEIQKLTDRYIAEVDKLLQTKEAELM 183


>gi|254779799|ref|YP_003057905.1| ribosome recycling factor [Helicobacter pylori B38]
 gi|254001711|emb|CAX29942.1| Ribosome recycling factor (Ribosome releasing factor) (RRF)
           [Helicobacter pylori B38]
 gi|317009940|gb|ADU80520.1| ribosome recycling factor [Helicobacter pylori India7]
          Length = 185

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNQVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAIL 183


>gi|317178450|dbj|BAJ56238.1| ribosome recycling factor [Helicobacter pylori F30]
          Length = 185

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEDAIL 183


>gi|312194965|ref|YP_004015026.1| ribosome recycling factor [Frankia sp. EuI1c]
 gi|311226301|gb|ADP79156.1| ribosome recycling factor [Frankia sp. EuI1c]
          Length = 185

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 111/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K D   +RTGR++PS+   + V+ YG+  P+ Q+A+  + EPRM+
Sbjct: 6   LLEAEEKMDKAVTVAKDDFANIRTGRITPSVFSKILVDYYGAPTPVQQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  ++++E+ + +S+LG+NP  +G ++R+  PE +E+RR  LVKVA   AE +K
Sbjct: 66  IITPFDKSSLSAIEKAVRDSDLGVNPSNDGTIIRVVFPELSEQRRRDLVKVARGKAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IS+RN+RR   + L K  K G A ED     E D+++ T   +  ID   + K+ +++
Sbjct: 126 ISIRNVRRHAKEALDKIVKDGDAGEDEGRRAEKDLEESTHRYVAQIDELLKAKESDLL 183


>gi|261839975|gb|ACX99740.1| ribosome recycling factor [Helicobacter pylori 52]
          Length = 185

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEDAIL 183


>gi|157412937|ref|YP_001483803.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9215]
 gi|166991558|sp|A8G3N6|RRF_PROM2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157387512|gb|ABV50217.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9215]
          Length = 182

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/175 (38%), Positives = 110/175 (62%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           I++ M  +I   +++  T+RTGR + S+LD V V+ YG+  P+  +A ++ ++ + + + 
Sbjct: 6   IQENMNKSIEATQRNFNTIRTGRANASLLDRVSVDYYGAETPIKSLATISTIDSQTISIQ 65

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+++
Sbjct: 66  PFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVAL 125

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRRD +D  KK  K G  S D     +++IQKITD  I  I++   EK+KEI+
Sbjct: 126 RNIRRDAVDKEKKDEKDGLISIDESRDNQSEIQKITDKYIALIETKLSEKEKEIL 180


>gi|317011456|gb|ADU85203.1| ribosome recycling factor [Helicobacter pylori SouthAfrica7]
          Length = 185

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 108/174 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L ++  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALSREFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERAIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     ++ IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKVKKLEKDKEISEDESKKAQDQIQKITDEAIKKIDESVKNKEDAIL 183


>gi|306822703|ref|ZP_07456081.1| ribosome recycling factor [Bifidobacterium dentium ATCC 27679]
 gi|304554248|gb|EFM42157.1| ribosome recycling factor [Bifidobacterium dentium ATCC 27679]
          Length = 186

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 108/185 (58%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    +   K +M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V
Sbjct: 1   MNMANIVDQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 61  PEPRTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKG 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G   ED    L  ++ K+T  T   +D+  E K+
Sbjct: 121 KAEDGKVAVRNIRRKTKESIDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDTLLEAKQ 180

Query: 181 KEIMH 185
           KEIM 
Sbjct: 181 KEIME 185


>gi|317182505|dbj|BAJ60289.1| ribosome recycling factor [Helicobacter pylori F57]
          Length = 185

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEYAIL 183


>gi|111225137|ref|YP_715931.1| ribosome recycling factor [Frankia alni ACN14a]
 gi|123043981|sp|Q0RDQ6|RRF_FRAAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|111152669|emb|CAJ64410.1| ribosome releasing factor [Frankia alni ACN14a]
          Length = 185

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 113/178 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  K+D   +RTGR++P++   + V+ YG+  P+ Q+A+  + EPRM+
Sbjct: 6   LLDAEEKMEKAVSVAKEDFANIRTGRITPAVFSKIVVDYYGAPTPVQQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +AS+E+ + +S+LG+NP  +G ++RI  PE +E+RR  LVKVA + AE+++
Sbjct: 66  IITPYDKSSLASIEKAVRDSDLGVNPSNDGTIIRIVFPELSEQRRRDLVKVARSKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN+RR   D + +  + G A ED     E D+ + T   +  +D     K+ +++
Sbjct: 126 VSIRNVRRHAKDGIDRIVRDGDAGEDEGRRAEKDLDEATHRYVGQVDELLRLKEADLL 183


>gi|291299707|ref|YP_003510985.1| ribosome recycling factor [Stackebrandtia nassauensis DSM 44728]
 gi|290568927|gb|ADD41892.1| ribosome recycling factor [Stackebrandtia nassauensis DSM 44728]
          Length = 185

 Score =  132 bits (333), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 109/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M  +I   K++   +RTGR S +M   + V+ YGS  PL Q+A++ V EPRM+
Sbjct: 6   LFDAEEKMDGSIEHAKEEFAAIRTGRASAAMFSKIVVDYYGSPTPLPQLASIAVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D     ++ER I +S+LG+NP  EG  LR+ VP+ TEERR  ++KVA   AE+SK
Sbjct: 66  IIKPYDVSQTDALERAIRDSDLGVNPNNEGNQLRLFVPQMTEERRREMIKVARHKAEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I+VRN+RR   + L++    G+  ED     E D+ ++T   IK ID     K+ E++
Sbjct: 126 IAVRNVRRKAKEELERLVSDGEVGEDEGHRAEKDLDELTQRHIKLIDELVAHKETELL 183


>gi|255321712|ref|ZP_05362867.1| ribosome recycling factor [Campylobacter showae RM3277]
 gi|255301192|gb|EET80454.1| ribosome recycling factor [Campylobacter showae RM3277]
          Length = 185

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 112/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   Q  K+     I  LK+D  TLRTG+V+ S++D + V+ YGS  PLNQVA V  
Sbjct: 2   LNEIYKKQ--KEHSDKCIEGLKRDFTTLRTGKVNISIVDNIYVDYYGSQTPLNQVATVLT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++   I  +N+G+NP  +G+ +++  P  T E+R    K A A
Sbjct: 60  SDASTISITPWEKPMLKTITAAISAANIGVNPNNDGESVKLFFPPMTVEQRQENAKHAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + EK+K+S+RNIR+D  D +KK  K    +ED     ++++QKITDS    IDS  +EK+
Sbjct: 120 FGEKAKVSIRNIRKDANDEVKKLEKDKTITEDESKKGQDEVQKITDSYTSKIDSLVKEKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 NELL 183


>gi|304312451|ref|YP_003812049.1| Ribosome recycling factor [gamma proteobacterium HdN1]
 gi|301798184|emb|CBL46406.1| Ribosome recycling factor [gamma proteobacterium HdN1]
          Length = 185

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 107/174 (61%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +  L++ +  +RTGR +P++LD VKV+ YG+  PL QVA++ V + R L +S +D
Sbjct: 12  RMKKCLEALEQALRKVRTGRANPAILDGVKVKYYGTDTPLKQVASINVEDSRTLSISAFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           +  +  +E+ I +++LGLNP   G V+R+P+P  T+E R  + K+A   AE +++SVRN+
Sbjct: 72  RGAIPDIEKAIMKADLGLNPSTSGVVIRVPMPALTQETRKEMTKIARNEAEHARVSVRNV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD    +K+  K  +  ED     E+++QK+TD  I  +D     K+ ++M  
Sbjct: 132 RRDANADIKELLKEKQIGEDEARKGEDEVQKLTDRYIVEVDKILTAKEADLMQI 185


>gi|254521520|ref|ZP_05133575.1| ribosome recycling factor [Stenotrophomonas sp. SKA14]
 gi|219719111|gb|EED37636.1| ribosome recycling factor [Stenotrophomonas sp. SKA14]
          Length = 184

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/177 (41%), Positives = 108/177 (61%), Gaps = 3/177 (1%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYG-SHVPLNQVANVTVLEPRMLV 67
           N + RM  +I  LK  + ++RTGR +P++LD V V AYG +  PLNQVA+++  +   L+
Sbjct: 8   NAQTRMAKSIDALKHTLTSIRTGRATPALLDRVTVNAYGNASTPLNQVASISNADAHSLL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +DK M+  +E+G++  N    P   G  +RI +P  TEERR  LVK      E +KI
Sbjct: 68  VTPFDKSMIKEIEKGLY--NHEFTPNTLGAAIRINMPPPTEERRKELVKQVQKEGEGAKI 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIR+D    + K  K    SED     E+DIQK+TD +IK++D    EK+KE++
Sbjct: 126 AVRNIRQDANKEIAKLVKDKAISEDEKKRGEDDIQKLTDGSIKDVDKVVAEKEKELL 182


>gi|308183366|ref|YP_003927493.1| ribosome recycling factor [Helicobacter pylori PeCan4]
 gi|308065551|gb|ADO07443.1| ribosome recycling factor [Helicobacter pylori PeCan4]
          Length = 185

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 106/174 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQK TD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKIKKLEKDKEISEDESKKAQEQIQKTTDEAIKTIDESVKNKEDAIL 183


>gi|261838579|gb|ACX98345.1| ribosome releasing factor [Helicobacter pylori 51]
          Length = 185

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 106/174 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NTRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKQIDESVKNKEDAIL 183


>gi|237753264|ref|ZP_04583744.1| ribosome recycling factor [Helicobacter winghamensis ATCC BAA-430]
 gi|229375531|gb|EEO25622.1| ribosome recycling factor [Helicobacter winghamensis ATCC BAA-430]
          Length = 184

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 111/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M  +I  +KK+  TLR+G+VS S+LD ++++ Y +  PLNQV +V   +   +V++ 
Sbjct: 9   KEAMDKSIEAMKKEFGTLRSGKVSVSILDHIRIDYYDTPTPLNQVGSVIAQDASTIVITP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A    EK+K+++R
Sbjct: 69  WEKNLLKDIERAIQEANIGVNPNNDGETIKLFFPPMTSEQRKEIAKEAKNIGEKAKVAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  D +KK  K  + SED     +++IQK TD+  K ID   + K+++++
Sbjct: 129 NIRKDSNDKIKKLEKDKEISEDESKKGQDEIQKFTDNATKKIDELVKHKEEDLL 182


>gi|50842996|ref|YP_056223.1| ribosome recycling factor [Propionibacterium acnes KPA171202]
 gi|289426460|ref|ZP_06428203.1| ribosome recycling factor [Propionibacterium acnes SK187]
 gi|289428643|ref|ZP_06430326.1| ribosome recycling factor [Propionibacterium acnes J165]
 gi|295131067|ref|YP_003581730.1| ribosome recycling factor [Propionibacterium acnes SK137]
 gi|60390690|sp|Q6A7K0|RRF_PROAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|50840598|gb|AAT83265.1| ribosome recycling factor [Propionibacterium acnes KPA171202]
 gi|289153188|gb|EFD01906.1| ribosome recycling factor [Propionibacterium acnes SK187]
 gi|289158041|gb|EFD06261.1| ribosome recycling factor [Propionibacterium acnes J165]
 gi|291377325|gb|ADE01180.1| ribosome recycling factor [Propionibacterium acnes SK137]
 gi|313763566|gb|EFS34930.1| ribosome recycling factor [Propionibacterium acnes HL013PA1]
 gi|313773505|gb|EFS39471.1| ribosome recycling factor [Propionibacterium acnes HL074PA1]
 gi|313793959|gb|EFS41983.1| ribosome recycling factor [Propionibacterium acnes HL110PA1]
 gi|313801346|gb|EFS42597.1| ribosome recycling factor [Propionibacterium acnes HL110PA2]
 gi|313807974|gb|EFS46455.1| ribosome recycling factor [Propionibacterium acnes HL087PA2]
 gi|313811557|gb|EFS49271.1| ribosome recycling factor [Propionibacterium acnes HL083PA1]
 gi|313816746|gb|EFS54460.1| ribosome recycling factor [Propionibacterium acnes HL059PA1]
 gi|313819543|gb|EFS57257.1| ribosome recycling factor [Propionibacterium acnes HL046PA2]
 gi|313822134|gb|EFS59848.1| ribosome recycling factor [Propionibacterium acnes HL036PA1]
 gi|313823632|gb|EFS61346.1| ribosome recycling factor [Propionibacterium acnes HL036PA2]
 gi|313825956|gb|EFS63670.1| ribosome recycling factor [Propionibacterium acnes HL063PA1]
 gi|313829423|gb|EFS67137.1| ribosome recycling factor [Propionibacterium acnes HL063PA2]
 gi|313831297|gb|EFS69011.1| ribosome recycling factor [Propionibacterium acnes HL007PA1]
 gi|313834908|gb|EFS72622.1| ribosome recycling factor [Propionibacterium acnes HL056PA1]
 gi|313839933|gb|EFS77647.1| ribosome recycling factor [Propionibacterium acnes HL086PA1]
 gi|314914720|gb|EFS78551.1| ribosome recycling factor [Propionibacterium acnes HL005PA4]
 gi|314919318|gb|EFS83149.1| ribosome recycling factor [Propionibacterium acnes HL050PA1]
 gi|314920772|gb|EFS84603.1| ribosome recycling factor [Propionibacterium acnes HL050PA3]
 gi|314924719|gb|EFS88550.1| ribosome recycling factor [Propionibacterium acnes HL036PA3]
 gi|314930451|gb|EFS94282.1| ribosome recycling factor [Propionibacterium acnes HL067PA1]
 gi|314954392|gb|EFS98798.1| ribosome recycling factor [Propionibacterium acnes HL027PA1]
 gi|314957475|gb|EFT01578.1| ribosome recycling factor [Propionibacterium acnes HL002PA1]
 gi|314962110|gb|EFT06211.1| ribosome recycling factor [Propionibacterium acnes HL002PA2]
 gi|314963689|gb|EFT07789.1| ribosome recycling factor [Propionibacterium acnes HL082PA1]
 gi|314968483|gb|EFT12581.1| ribosome recycling factor [Propionibacterium acnes HL037PA1]
 gi|314974173|gb|EFT18269.1| ribosome recycling factor [Propionibacterium acnes HL053PA1]
 gi|314976537|gb|EFT20632.1| ribosome recycling factor [Propionibacterium acnes HL045PA1]
 gi|314978900|gb|EFT22994.1| ribosome recycling factor [Propionibacterium acnes HL072PA2]
 gi|314984356|gb|EFT28448.1| ribosome recycling factor [Propionibacterium acnes HL005PA1]
 gi|314986546|gb|EFT30638.1| ribosome recycling factor [Propionibacterium acnes HL005PA2]
 gi|314990905|gb|EFT34996.1| ribosome recycling factor [Propionibacterium acnes HL005PA3]
 gi|315079539|gb|EFT51532.1| ribosome recycling factor [Propionibacterium acnes HL053PA2]
 gi|315081233|gb|EFT53209.1| ribosome recycling factor [Propionibacterium acnes HL078PA1]
 gi|315083599|gb|EFT55575.1| ribosome recycling factor [Propionibacterium acnes HL027PA2]
 gi|315087116|gb|EFT59092.1| ribosome recycling factor [Propionibacterium acnes HL002PA3]
 gi|315089289|gb|EFT61265.1| ribosome recycling factor [Propionibacterium acnes HL072PA1]
 gi|315095312|gb|EFT67288.1| ribosome recycling factor [Propionibacterium acnes HL038PA1]
 gi|315099193|gb|EFT71169.1| ribosome recycling factor [Propionibacterium acnes HL059PA2]
 gi|315100324|gb|EFT72300.1| ribosome recycling factor [Propionibacterium acnes HL046PA1]
 gi|315106750|gb|EFT78726.1| ribosome recycling factor [Propionibacterium acnes HL030PA1]
 gi|315108992|gb|EFT80968.1| ribosome recycling factor [Propionibacterium acnes HL030PA2]
 gi|327328425|gb|EGE70187.1| ribosome recycling factor [Propionibacterium acnes HL096PA2]
 gi|327329709|gb|EGE71465.1| ribosome recycling factor [Propionibacterium acnes HL096PA3]
 gi|327444212|gb|EGE90866.1| ribosome recycling factor [Propionibacterium acnes HL043PA2]
 gi|327444909|gb|EGE91563.1| ribosome recycling factor [Propionibacterium acnes HL043PA1]
 gi|327446394|gb|EGE93048.1| ribosome recycling factor [Propionibacterium acnes HL013PA2]
 gi|327452018|gb|EGE98672.1| ribosome recycling factor [Propionibacterium acnes HL092PA1]
 gi|327454945|gb|EGF01600.1| ribosome recycling factor [Propionibacterium acnes HL087PA3]
 gi|327457769|gb|EGF04424.1| ribosome recycling factor [Propionibacterium acnes HL083PA2]
 gi|328752149|gb|EGF65765.1| ribosome recycling factor [Propionibacterium acnes HL020PA1]
 gi|328755222|gb|EGF68838.1| ribosome recycling factor [Propionibacterium acnes HL087PA1]
 gi|328758299|gb|EGF71915.1| ribosome recycling factor [Propionibacterium acnes HL025PA2]
 gi|328760030|gb|EGF73611.1| ribosome recycling factor [Propionibacterium acnes HL099PA1]
 gi|332675946|gb|AEE72762.1| ribosome-recycling factor [Propionibacterium acnes 266]
          Length = 184

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ + +MG  +   +++   +RTGR +P+M + + VE YG+  PL Q+A+  V E R +
Sbjct: 5   IKDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQVPEARTV 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  V  VE+ I +S+LG+NP  +G V+R  +P  TEERR   +K+A   AE+ +
Sbjct: 65  LIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKAEEGR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RR   D +KK  K  + SED +  LE ++ ++T   ++ ID   + K+ E++  
Sbjct: 125 IAVRNVRRASNDVVKKQEKDKEISEDEMTRLEKELDQVTRKYVEQIDELLKSKESELLEI 184


>gi|37519857|ref|NP_923234.1| ribosome recycling factor [Gloeobacter violaceus PCC 7421]
 gi|39932053|sp|Q7NNX0|RRF_GLOVI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|35210848|dbj|BAC88229.1| ribosome releasing factor [Gloeobacter violaceus PCC 7421]
          Length = 182

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 103/170 (60%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   I     +  T+RTGR S S+LD + VE YG   PL  +A +T  +   +++  +D 
Sbjct: 10  MRKAIEATAGNFATIRTGRASTSLLDRINVEYYGQPTPLKTLATITTPDASTVLIQPYDP 69

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E+ I ES+LGL P  +G+ +R+ +P  T ERR  LVKV    AE+ +++VRNIR
Sbjct: 70  SSLRLIEKTILESDLGLPPSNDGKTIRLNIPPLTAERRKDLVKVLRNLAEEGRVAVRNIR 129

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R  +D ++K  K  K SED    L++++QK+TD +I+ I+  FE K+KEI
Sbjct: 130 RHAIDEVRKEEKDAKVSEDEARRLQDEVQKLTDKSIQQIEKLFEAKEKEI 179


>gi|117928746|ref|YP_873297.1| ribosome recycling factor [Acidothermus cellulolyticus 11B]
 gi|166230403|sp|A0LV51|RRF_ACIC1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|117649209|gb|ABK53311.1| ribosome recycling factor [Acidothermus cellulolyticus 11B]
          Length = 185

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 112/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M    +  +++   +RTGR +P++   + VE YG+  PLNQ+A+ TV + R++
Sbjct: 6   LLEAEEKMEKATNVARENFAAIRTGRANPALFSKITVEYYGTPTPLNQLASFTVADARLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  + ++E+ I +S+LG+NP  +G V+R+ +P  TEERR   +K+A   AE+++
Sbjct: 66  VIHPYDKGSLRAIEKAIRDSDLGVNPTDDGSVIRVAIPPLTEERRRDYIKMARHEAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRR   D L K +K G+  ED V   E ++ ++T   + +ID   + K+ E++
Sbjct: 126 VAIRNIRRHAKDALDKLQKDGEVGEDDVRRAEKELDELTHKYVAHIDEMLKHKEAELL 183


>gi|309800830|ref|ZP_07694962.1| ribosome recycling factor [Bifidobacterium dentium JCVIHMP022]
 gi|308222366|gb|EFO78646.1| ribosome recycling factor [Bifidobacterium dentium JCVIHMP022]
          Length = 184

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  ++D    K +M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V
Sbjct: 1   MANIVD--QAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 59  PEPRTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKG 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G   ED    L  ++ K+T  T   +D+  E K+
Sbjct: 119 KAEDGKVAVRNIRRKTKESIDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDTLLEAKQ 178

Query: 181 KEIMH 185
           KEIM 
Sbjct: 179 KEIME 183


>gi|297202666|ref|ZP_06920063.1| ribosome recycling factor [Streptomyces sviceus ATCC 29083]
 gi|197713241|gb|EDY57275.1| ribosome recycling factor [Streptomyces sviceus ATCC 29083]
          Length = 185

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA   AE SK
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRRDYIKVARGKAEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R++RR   D + K  K G+  ED     E D+   T   +  +D   + K+ E++ 
Sbjct: 126 VSIRSVRRKAKDAIDKLVKDGEVGEDEGRRAEKDLDDATHKYVAQVDELLKHKEAELLE 184


>gi|57239449|ref|YP_180585.1| ribosome recycling factor [Ehrlichia ruminantium str. Welgevonden]
 gi|58579425|ref|YP_197637.1| ribosome recycling factor [Ehrlichia ruminantium str. Welgevonden]
 gi|62900780|sp|Q5HAF9|RRF_EHRRW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|57161528|emb|CAH58455.1| ribosome recycling factor [Ehrlichia ruminantium str. Welgevonden]
 gi|58418051|emb|CAI27255.1| Ribosome recycling factor [Ehrlichia ruminantium str. Welgevonden]
          Length = 185

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/178 (41%), Positives = 109/178 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K+RM  T+S    D+  +RTGR   S+LD + VE YG  V LN +++++V + + L+
Sbjct: 7   QDAKNRMEKTLSVYLSDVDGIRTGRARASVLDGIVVETYGGRVKLNTISSISVSDNKTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VW+   V +++  I  SNLG     EG V+R+ VP+ T++ R  LVK+    +E  +I
Sbjct: 67  VKVWEINNVGAIKTAIINSNLGFGFSCEGAVIRLTVPDMTQDMRKNLVKLLGKISEDCRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           S+RNIRRD MD LK  + +   SED +     +IQKITD  IK I+  F  K+KE++H
Sbjct: 127 SIRNIRRDIMDKLKIMQDNKDISEDDLRIAGVEIQKITDEIIKKINDTFLAKEKELLH 184


>gi|57234843|ref|YP_181120.1| ribosome recycling factor [Dehalococcoides ethenogenes 195]
 gi|123618956|sp|Q3Z9H9|RRF_DEHE1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|57225291|gb|AAW40348.1| ribosome recycling factor [Dehalococcoides ethenogenes 195]
          Length = 185

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 112/177 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  + +M  ++  L +++  +RTGR SP++++ +KVE  G   P+N +A++   +PR +
Sbjct: 6   LQKSEKKMAASLDVLSQELSGIRTGRSSPALVEHIKVEYAGVPTPINHLASIAAPDPRYI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+  ++++E+ I +S+LGL P  +G ++R+ +P  +EERR  ++K+     E+ K
Sbjct: 66  TIQPWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVSKRLEEDK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I++RN+RRD MD +KK  KS + S+D +    + +QKITDS I   D    +K+ E+
Sbjct: 126 IAMRNVRRDAMDEMKKLEKSKEISQDDLKRGSDQLQKITDSFIAKADKLGADKETEL 182


>gi|311694060|gb|ADP96933.1| ribosome recycling factor [marine bacterium HP15]
          Length = 185

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 98/157 (62%)

Query: 28  LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           +RTGR  PS+LD V V  YG   PL QVA+V V + R L VS W+K ++ ++E+ I  S+
Sbjct: 27  IRTGRAHPSILDSVMVNYYGQETPLKQVASVNVEDNRTLTVSPWEKNLMPTIEKAIMASD 86

Query: 88  LGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSG 147
           LGLNP   G ++RIP+P  TEE R  +VK A A AE  ++S+RN RRD    +K   K  
Sbjct: 87  LGLNPATSGDIIRIPMPMLTEETRKEMVKQAKADAEHGRVSIRNARRDANSMIKDLLKEK 146

Query: 148 KASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + +ED     E+DIQK+TD  I  ++   + K++++M
Sbjct: 147 EITEDDERKGEDDIQKLTDRYIAEVEKMLKAKEEDLM 183


>gi|317013043|gb|ADU83651.1| ribosome recycling factor [Helicobacter pylori Lithuania75]
          Length = 185

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  ++  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   + +S 
Sbjct: 10  KDLMQKSVQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTIQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTSEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAIL 183


>gi|56416455|ref|YP_153529.1| ribosome recycling factor [Anaplasma marginale str. St. Maries]
 gi|222474824|ref|YP_002563239.1| ribosome recycling factor (rrf) [Anaplasma marginale str. Florida]
 gi|254994684|ref|ZP_05276874.1| ribosome recycling factor [Anaplasma marginale str. Mississippi]
 gi|255002796|ref|ZP_05277760.1| ribosome recycling factor [Anaplasma marginale str. Puerto Rico]
 gi|255003930|ref|ZP_05278731.1| ribosome recycling factor [Anaplasma marginale str. Virginia]
 gi|56387687|gb|AAV86274.1| ribosome recycling factor [Anaplasma marginale str. St. Maries]
 gi|222418960|gb|ACM48983.1| ribosome recycling factor (rrf) [Anaplasma marginale str. Florida]
          Length = 183

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 105/174 (60%), Gaps = 1/174 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM  T S    D+  +RTGRVS S+LD V +  YG+ V LN VA+++V   R L++S+
Sbjct: 10  RERMEKTFSMFLSDISGIRTGRVSASLLDGVFLTYYGNKVRLNTVASISV-SGRTLLISL 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD  ++  V+  I  SNLG     E   +R+ VPE T + R  LVK+     E+ K+SVR
Sbjct: 69  WDASVIGDVKAAIDASNLGFGMTCEATTIRLVVPELTSDVRKNLVKMLSKLTEEGKVSVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRRD +D LK  + + + SED   S+  +IQK+TD+ IK I   F  K+ EI+
Sbjct: 129 NIRRDTIDKLKSMQDNKEISEDDFHSISAEIQKVTDTFIKKIGDAFSVKESEIL 182


>gi|195953623|ref|YP_002121913.1| ribosome recycling factor [Hydrogenobaculum sp. Y04AAS1]
 gi|259494546|sp|B4U9X4|RRF_HYDS0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|195933235|gb|ACG57935.1| ribosome recycling factor [Hydrogenobaculum sp. Y04AAS1]
          Length = 182

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 108/180 (60%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++ M  +I+  K ++   RTGR S S+++ +K+E YGS VP+ QV NV+V EP  +
Sbjct: 6   LEEAEESMKKSINHFKSELAGFRTGRASTSLVEDIKIEYYGSRVPIKQVGNVSVPEPNQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++ VWD+  ++ +E+ I E  L LNP  +G  LRI +P  T+ERR  LVK+ H   E++K
Sbjct: 66  LIQVWDQNAISPIEKAIME-QLSLNPARQGNTLRITLPPLTQERRKELVKLLHKTTEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  + ++        SED +    + +QKITD  I  I +    K+KEI   
Sbjct: 125 VAIRNIRRDAKEMIESLE---GISEDEIKRALDKLQKITDHYIDEISNLSSSKEKEITEL 181


>gi|269959131|ref|YP_003328920.1| ribosome recycling factor [Anaplasma centrale str. Israel]
 gi|269848962|gb|ACZ49606.1| ribosome recycling factor [Anaplasma centrale str. Israel]
          Length = 183

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 105/174 (60%), Gaps = 1/174 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+RM  T S    D+  +RTGRVS S+LD V +  YG+ V LN VA+++V   R L++S+
Sbjct: 10  KERMEKTFSMFLSDISGIRTGRVSASLLDGVFLTYYGNKVRLNTVASISV-SGRTLLISL 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD  ++  V+  I  SNLG     E   +R+ VPE T + R  LVK+     E+ K+SVR
Sbjct: 69  WDASVLGDVKAAIDASNLGFGMTCEATTIRLVVPELTSDVRKNLVKMLSKLTEEGKVSVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIRRD +D LK  + + + SED   S+  +IQK+TD+ IK I   F  K+ EI+
Sbjct: 129 NIRRDTIDKLKSMQDNKEISEDDFHSVSAEIQKVTDTFIKKIGDAFSVKESEIL 182


>gi|291542738|emb|CBL15848.1| ribosome recycling factor [Ruminococcus bromii L2-63]
          Length = 184

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   + M   +  ++ +   +R GR +P++LD VKV+ YG+  P+NQ+A V+V E R L
Sbjct: 5   LKKAGESMDRRLEHMRTEFSEIRAGRANPAVLDKVKVDYYGAPTPVNQLAAVSVTEARTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD  ++  +E+ I  S++G+NP  +G+++R+  P  TE+RR  +VK     AE++K
Sbjct: 65  TIQPWDASVLRQIEKAIQTSDIGINPQNDGKIIRLIFPPLTEDRRKEIVKDVQKIAEETK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +RN+RR+ +D LK  +K G+ +ED +   E   Q +TD  +K ++S    K+KEI+  
Sbjct: 125 IQIRNVRRELIDKLKAMKKDGELTEDDLKQGEKKAQDLTDKYVKEVESVSAVKQKEILEM 184


>gi|21223982|ref|NP_629761.1| ribosome recycling factor [Streptomyces coelicolor A3(2)]
 gi|289768824|ref|ZP_06528202.1| ribosome recycling factor [Streptomyces lividans TK24]
 gi|6831642|sp|O86770|RRF_STRCO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|3319759|emb|CAA19925.1| ribosome recycling factor [Streptomyces coelicolor A3(2)]
 gi|289699023|gb|EFD66452.1| ribosome recycling factor [Streptomyces lividans TK24]
          Length = 185

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  E YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVAEYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA A  E +K
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTEERRREYIKVAKAKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 126 VSIRSVRRKAKDSIDKMVKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|217033577|ref|ZP_03439005.1| hypothetical protein HP9810_899g13 [Helicobacter pylori 98-10]
 gi|216943923|gb|EEC23357.1| hypothetical protein HP9810_899g13 [Helicobacter pylori 98-10]
          Length = 185

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  +K ID   + K+  I+
Sbjct: 130 NIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAVKTIDESVKNKEDAIL 183


>gi|219685407|ref|ZP_03540226.1| ribosome recycling factor [Borrelia garinii Far04]
 gi|219673180|gb|EED30200.1| ribosome recycling factor [Borrelia garinii Far04]
          Length = 184

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 108/173 (62%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+  W
Sbjct: 10  EKMSKVLLSLDNEYKTLRTGRISSNVFDKIFIQYHGQKTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP+ +G V+RI VP  T ERR  +VK A   AE+ K+S RN
Sbjct: 70  DKTILNKIEQAILNSDLSMNPLSDGSVIRIKVPALTNERRQDIVKHAKKIAEEHKVSTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IR+D  + +KK  K  + +ED +  + +DIQK  D  IK ID+  E K +EIM
Sbjct: 130 IRQDLNNKVKKQEKESEITEDNLKRILDDIQKSIDIYIKRIDTILESKIQEIM 182


>gi|256784931|ref|ZP_05523362.1| ribosome recycling factor [Streptomyces lividans TK24]
          Length = 186

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  E YG+  P+NQ+A+ +V EPRM 
Sbjct: 7   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVAEYYGAPTPINQLASFSVPEPRMA 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA A  E +K
Sbjct: 67  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTEERRREYIKVAKAKGEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 127 VSIRSVRRKAKDSIDKMVKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 185


>gi|189468227|ref|ZP_03017012.1| hypothetical protein BACINT_04623 [Bacteroides intestinalis DSM
           17393]
 gi|189436491|gb|EDV05476.1| hypothetical protein BACINT_04623 [Bacteroides intestinalis DSM
           17393]
          Length = 209

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 104/178 (58%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA V   + R +
Sbjct: 31  LDEAQEKMDMAVMYLEEALAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVNTPDARSI 90

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 91  AIKPWDKSMFRVIEKAIIDSSLGIMPENNGEIIRIGIPPLTEERRRQLAKQCKGEGETAK 150

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKKS K G A ED     E  +QKI D  IK ID     K KEIM
Sbjct: 151 VSVRNARRDAIDALKKSVKDGLA-EDAQKGGEEKLQKIHDKYIKQIDDMLIAKDKEIM 207


>gi|153003180|ref|YP_001377505.1| ribosome recycling factor [Anaeromyxobacter sp. Fw109-5]
 gi|190360233|sp|A7H725|RRF_ANADF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|152026753|gb|ABS24521.1| ribosome recycling factor [Anaeromyxobacter sp. Fw109-5]
          Length = 187

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++   + +T+  L++++ ++RTGR S  +LD V+V+ YG+  PLNQVA ++V E R++
Sbjct: 8   LNDLHGGIANTLDDLRRELASVRTGRASLHLLDGVRVDYYGTSTPLNQVATLSVPEARLI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  W+K ++  +E+ I ++NLG+NP  +  ++R+P+P  TEERR  +VK      E  K
Sbjct: 68  MVKPWEKNLIPVIEKAIRDANLGVNPQSDKDLVRVPIPPLTEERRKEIVKQVKHKGEDHK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN RRD  + ++ + K G  + D      + +QK TD  +K +D     K+KE+M  
Sbjct: 128 VAIRNQRRDAKELIEVAEKDGDIAADDAKKALDKMQKETDEGVKKVDEIVAAKEKEVMQV 187


>gi|238898426|ref|YP_002924107.1| ribosome recycling factor [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259494545|sp|C4K5W6|RRF_HAMD5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229466185|gb|ACQ67959.1| ribosome recycling factor [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 185

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           + RM       +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+   +   L V+V
Sbjct: 10  QSRMEKCTESFESQIKKIRTGRASPSILDSIQVEYYGASTPLRQLANIVAEDSSHLAVTV 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D+ +   +E+ I  S LGLNP     ++R+P+P  TE+RR  L+KV  + AE ++++VR
Sbjct: 70  FDRNLTPYIEKAIQNSPLGLNPSSAANLIRVPLPPLTEDRRKELIKVIRSEAEAARVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR       K++ K  + SED    +++++QK+TD  IK ID F  +K+KE+M
Sbjct: 130 NIRASVNKKSKETLKKKEISEDEDRQIQDNVQKLTDRYIKKIDEFLTKKEKEVM 183


>gi|223985634|ref|ZP_03635684.1| hypothetical protein HOLDEFILI_02990 [Holdemania filiformis DSM
           12042]
 gi|223962401|gb|EEF66863.1| hypothetical protein HOLDEFILI_02990 [Holdemania filiformis DSM
           12042]
          Length = 182

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 111/184 (60%), Gaps = 5/184 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +++D  N + +M   I    + + T+RTGR +  ML  V+ + YG   P+NQ++++TV
Sbjct: 2   MKEILD--NSRSKMQKAIDTFSEHLETIRTGRANAGMLAGVEADYYGCPTPINQISSITV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           +E R LVV  +D   + ++E  I++S+LGLNP  +G V+RI VP  TEE R  L K    
Sbjct: 60  VEGRQLVVKPYDSSSLKAIEHAINKSDLGLNPQNDGSVIRINVPALTEETRKELCKKVSK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E++KI+VRN+RRD  +    ++K    +ED        IQK+TD  IK +DS   EK+
Sbjct: 120 LSEEAKIAVRNLRRDANEI---AKKDDTLTEDAEKECLEKIQKLTDEMIKKVDSVAAEKE 176

Query: 181 KEIM 184
           KEIM
Sbjct: 177 KEIM 180


>gi|126695885|ref|YP_001090771.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9301]
 gi|126542928|gb|ABO17170.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9301]
          Length = 173

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 107/171 (62%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +I   +++  T+RTGR + S+LD V VE YG+  P+  +A ++ ++ + + +  +D 
Sbjct: 1   MNKSIEATQRNFNTIRTGRANASLLDRVSVEYYGAETPIKSLATISTVDSQTISIQPFDI 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+++RNIR
Sbjct: 61  SCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVALRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +D  KK  K G  S D     +++IQKITD  I  I++   EK+KEI+
Sbjct: 121 RDAVDKEKKDEKDGLISIDESRDNQSEIQKITDKYIALIETKLSEKEKEIL 171


>gi|15612242|ref|NP_223895.1| ribosome recycling factor [Helicobacter pylori J99]
 gi|6831645|sp|Q9ZJX1|RRF_HELPJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|4155787|gb|AAD06763.1| RIBOSOME RECYCLING FACTOR (RIBOSOME RELEASING FACTOR) (RRF)
           [Helicobacter pylori J99]
          Length = 185

 Score =  132 bits (331), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 106/174 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NTRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAIL 183


>gi|218962144|ref|YP_001741919.1| ribosome recycling factor [Candidatus Cloacamonas acidaminovorans]
 gi|167730801|emb|CAO81713.1| ribosome recycling factor [Candidatus Cloacamonas acidaminovorans]
          Length = 184

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 106/177 (59%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N K++M  +   +      +RTGR S S+LD +K+  YG   P+ Q+ N+++ E RM+VV
Sbjct: 7   NTKEKMQKSFDAMLHQYSKIRTGRASASILDDIKINYYGLPTPIKQLCNISIPEARMIVV 66

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WDK  +A +E+ I  +N+G+ P  +G V+R+P    TEE+R  +VK     +E ++++
Sbjct: 67  QPWDKTTLADIEKAILAANIGITPENDGNVIRLPFQPLTEEKRRDIVKNIKKISEDTRVA 126

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD  D +KK +K  + SED       ++Q +TD  IK ID   + K+KEIM 
Sbjct: 127 IRNIRRDANDIVKKEKKDSEISEDDEKKQLKELQDLTDDWIKKIDEAEKAKEKEIME 183


>gi|88608154|ref|YP_506809.1| ribosome recycling factor [Neorickettsia sennetsu str. Miyayama]
 gi|123491285|sp|Q2GCI7|RRF_NEOSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|88600323|gb|ABD45791.1| ribosome recycling factor [Neorickettsia sennetsu str. Miyayama]
          Length = 185

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++   D++  +      D+  +R+G +S S+LD V V  +   + LNQVA+++V+  +ML
Sbjct: 6   IKETNDKLRSSYEVFLSDLKGIRSGSLSVSILDGVIVSTHMGKLRLNQVASLSVVNNKML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWDK  V +V+  I  SNLG+NPIVEG VLR+PVP+ TEERR  LVKV   Y +++K
Sbjct: 66  SVQVWDKSTVGAVKDAILTSNLGMNPIVEGSVLRLPVPDLTEERRKELVKVLKKYGDRAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD +  +K   K+ + SE+ + +L   I KI       ID    +K+ +I+
Sbjct: 126 VAVRNIRRDAISRIKVLEKAKEISENDMHALLKKIDKIISEEDARIDDAVSKKETDIL 183


>gi|91214958|ref|ZP_01251930.1| ribosome releasing factor [Psychroflexus torquis ATCC 700755]
 gi|91186563|gb|EAS72934.1| ribosome releasing factor [Psychroflexus torquis ATCC 700755]
          Length = 184

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/186 (41%), Positives = 118/186 (63%), Gaps = 6/186 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  + + K+ M   I  L+K + ++R G+ +PSML  V V+ YG+  P++QV+N+
Sbjct: 1   MNEEIEFIIDSTKESMEQAIQHLRKQLASIRAGKANPSMLSSVMVQYYGAKTPISQVSNI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R L +  ++K ++  +E+GI  +NLG NP+  G+ + I VP  TEERRL L K A
Sbjct: 61  NTPDARTLTIQPFEKSIIKDIEKGIMNANLGFNPMNNGESVIINVPPLTEERRLQLSKKA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE++KI VRN RR+ M+ +KK+       ED+    E+DIQK+TDS I+ ID  +  
Sbjct: 121 KAEAEEAKIGVRNDRRNAMNEIKKA----DLPEDVQKDTEDDIQKLTDSFIEEIDKIYAS 176

Query: 179 KKKEIM 184
           K+KEIM
Sbjct: 177 KEKEIM 182


>gi|208435150|ref|YP_002266816.1| ribosome releasing factor [Helicobacter pylori G27]
 gi|226749932|sp|B5Z8Q1|RRF_HELPG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|208433079|gb|ACI27950.1| ribosome releasing factor [Helicobacter pylori G27]
          Length = 185

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 106/174 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALSRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NTRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAIL 183


>gi|182415960|ref|YP_001821026.1| ribosome recycling factor [Opitutus terrae PB90-1]
 gi|177843174|gb|ACB77426.1| ribosome recycling factor [Opitutus terrae PB90-1]
          Length = 181

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 109/178 (61%), Gaps = 4/178 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + +M   +     +   + TG+ +P+M++ V +EAYGS + L   A ++  + R++
Sbjct: 6   LVDAQAKMKKAVDHTLHEFSAIHTGKATPAMVEGVMLEAYGSQMRLKDCAAISTPDARLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD  +V ++ +GI E+NLG NPI + +V+R+P+PE + ERR   VK AH  AE+ +
Sbjct: 66  QIQPWDASLVKAIVKGIQEANLGFNPIPDSKVVRVPLPEMSRERRQEFVKNAHRLAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VRN+RRD ++ LKK+    K  ED    LE DIQ  TD++IK I+     K+K+++
Sbjct: 126 VHVRNVRRDVLEGLKKA----KLPEDESKRLEKDIQTATDASIKAINDALAHKEKDLL 179


>gi|282854667|ref|ZP_06264002.1| ribosome recycling factor [Propionibacterium acnes J139]
 gi|282582249|gb|EFB87631.1| ribosome recycling factor [Propionibacterium acnes J139]
 gi|314923764|gb|EFS87595.1| ribosome recycling factor [Propionibacterium acnes HL001PA1]
 gi|314966222|gb|EFT10321.1| ribosome recycling factor [Propionibacterium acnes HL082PA2]
 gi|314981988|gb|EFT26081.1| ribosome recycling factor [Propionibacterium acnes HL110PA3]
 gi|315090899|gb|EFT62875.1| ribosome recycling factor [Propionibacterium acnes HL110PA4]
 gi|315095112|gb|EFT67088.1| ribosome recycling factor [Propionibacterium acnes HL060PA1]
 gi|315104341|gb|EFT76317.1| ribosome recycling factor [Propionibacterium acnes HL050PA2]
 gi|327328110|gb|EGE69879.1| ribosome recycling factor [Propionibacterium acnes HL103PA1]
          Length = 184

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ + +MG  +   +++   +RTGR +P+M + + VE YG+  PL Q+A+  V E R +
Sbjct: 5   IKDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQVPEARTV 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  V  VE+ I +S+LG+NP  +G V+R  +P  TEERR   +K+A   AE+ +
Sbjct: 65  LIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKAEEGR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RR   D +KK  K    SED +  LE ++ ++T   ++ ID   + K+ E++  
Sbjct: 125 IAVRNVRRASNDVVKKQEKDKDISEDEMTRLEKELDQVTRKYVEQIDELLKSKESELLEI 184


>gi|257792211|ref|YP_003182817.1| ribosome recycling factor [Eggerthella lenta DSM 2243]
 gi|317490131|ref|ZP_07948620.1| ribosome recycling factor [Eggerthella sp. 1_3_56FAA]
 gi|325833584|ref|ZP_08166033.1| ribosome recycling factor [Eggerthella sp. HGA1]
 gi|257476108|gb|ACV56428.1| ribosome recycling factor [Eggerthella lenta DSM 2243]
 gi|316910836|gb|EFV32456.1| ribosome recycling factor [Eggerthella sp. 1_3_56FAA]
 gi|325485508|gb|EGC87977.1| ribosome recycling factor [Eggerthella sp. HGA1]
          Length = 185

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   ++RM   +  L     ++RTGR +  +LD ++V+ YG   P+NQ+A V   +  ML
Sbjct: 6   MMQAEERMEKALGSLGDAFASVRTGRANAMVLDRIRVDYYGVPTPVNQMAGVKTPDAHML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++ ++E  I +S+LG+ P  +G V+R+P P  TEERR  LVK    YAE+++
Sbjct: 66  VIEPWDKGVLGAIEHAILQSDLGVTPSNDGSVIRLPFPALTEERRRELVKQCKGYAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN RRD    ++++ K     ED     + ++QK+TD  I  +D  F++K+ E+M  
Sbjct: 126 VAVRNARRDANSAIERAVKEDSLPEDDERRGQAEVQKLTDKYIAEVDEAFKKKEAEVMEI 185


>gi|73748219|ref|YP_307458.1| ribosome recycling factor [Dehalococcoides sp. CBDB1]
 gi|289432268|ref|YP_003462141.1| ribosome recycling factor [Dehalococcoides sp. GT]
 gi|123620145|sp|Q3ZZC4|RRF_DEHSC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|73659935|emb|CAI82542.1| ribosome recycling factor [Dehalococcoides sp. CBDB1]
 gi|288945988|gb|ADC73685.1| ribosome recycling factor [Dehalococcoides sp. GT]
          Length = 185

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 114/177 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  + +M  ++  L +++  +RTGR SP++++ ++VE  G   P+N +AN++  +PR +
Sbjct: 6   LQKSEKKMSASLDVLLQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLANISAPDPRYI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+  ++++E+ I +S+LGL P  +G ++R+ +P  +EERR  ++K+ +   E+ K
Sbjct: 66  TIQPWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKIVNKRLEEDK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I++RN+RRD MD +KK  K+ + S+D +    + +QKITD+ I   D    +K+ E+
Sbjct: 126 IAMRNVRRDAMDEMKKLEKAKEISQDDLKRGSDQLQKITDNFIAKADKLGADKEAEL 182


>gi|269217144|ref|ZP_06160998.1| ribosome recycling factor [Slackia exigua ATCC 700122]
 gi|269129281|gb|EEZ60366.1| ribosome recycling factor [Slackia exigua ATCC 700122]
          Length = 186

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 104/171 (60%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +S LK+    +RTGR +  +LD VKV+ YG   P+NQ+A V V +  ML +  WDK
Sbjct: 14  MEKALSNLKEAFAGVRTGRANAMVLDKVKVDYYGVPTPVNQMAAVKVPDAHMLTIEPWDK 73

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            MV ++E  I  S+LG+ P  +G V+R+P P+ TEERR  L K    ++E+ +++VR  R
Sbjct: 74  SMVRAIEAAILASDLGITPSNDGSVIRLPFPQLTEERRRDLAKQCKTFSEEGRVAVRKAR 133

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
                 ++K +K+ + SED     E  IQK+TDS IK +D  F++K+ E+M
Sbjct: 134 GAANAAVEKLKKASEISEDDARRDEESIQKLTDSYIKKVDEMFKKKEAELM 184


>gi|256390730|ref|YP_003112294.1| ribosome recycling factor [Catenulispora acidiphila DSM 44928]
 gi|256356956|gb|ACU70453.1| ribosome recycling factor [Catenulispora acidiphila DSM 44928]
          Length = 185

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 106/178 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D+  +RTGR +P+M   +  + YGS  PL+Q+A+  V + RM+
Sbjct: 6   LLEAEEKMDKAVEVAKEDLSGVRTGRANPAMFSKLTADYYGSPTPLSQMASFQVQDARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK  + ++ER I +S+LG+NP  +G V+R+  P+ TEERR   +KVA    E +K
Sbjct: 66  VIAPYDKTALGAIERSIRDSDLGVNPSSDGVVIRVVFPQLTEERRKEYIKVAKTKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ISVRNIRR   + L K  K G A ED V   E  + ++T      ID   + K+ E++
Sbjct: 126 ISVRNIRRHSKESLDKLAKDGDAGEDDVRRAEKHLDELTQKHTAQIDEMLKHKEAELL 183


>gi|317177998|dbj|BAJ55787.1| ribosome recycling factor [Helicobacter pylori F16]
          Length = 185

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV ++  L+   L +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSMMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEDAIL 183


>gi|224418730|ref|ZP_03656736.1| ribosome recycling factor [Helicobacter canadensis MIT 98-5491]
 gi|253826742|ref|ZP_04869627.1| ribosome releasing factor [Helicobacter canadensis MIT 98-5491]
 gi|253510148|gb|EES88807.1| ribosome releasing factor [Helicobacter canadensis MIT 98-5491]
          Length = 186

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 110/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++ M  +I  +KK+  TLR+G+VS ++LD +++  Y +  PLNQ+ +V   +   +V++ 
Sbjct: 11  QESMNKSIESMKKEFSTLRSGKVSVAILDHIRISYYDTPTPLNQIGSVIAQDASTIVITP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A    EK+KI++R
Sbjct: 71  WEKNLLKEIERAIQEANIGVNPNNDGETIKLFFPPMTSEQRKEIAKEAKNIGEKAKIAIR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  D +KK  K    SED     + +IQK+TD+ +K ID   + K++E++
Sbjct: 131 NIRKDSNDKVKKLEKDKVVSEDESKKGQEEIQKLTDNAVKKIDELVKHKEEELL 184


>gi|217032316|ref|ZP_03437812.1| hypothetical protein HPB128_132g14 [Helicobacter pylori B128]
 gi|298735720|ref|YP_003728245.1| ribosome recycling factor [Helicobacter pylori B8]
 gi|216945982|gb|EEC24596.1| hypothetical protein HPB128_132g14 [Helicobacter pylori B128]
 gi|298354909|emb|CBI65781.1| ribosome recycling factor [Helicobacter pylori B8]
          Length = 185

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 106/174 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  ++  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSVQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NTRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAIL 183


>gi|224534946|ref|ZP_03675515.1| ribosome recycling factor [Borrelia spielmanii A14S]
 gi|224513886|gb|EEF84211.1| ribosome recycling factor [Borrelia spielmanii A14S]
          Length = 184

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 107/173 (61%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR++ ++ D + +  +G   P+ QV+++ + E R++V+  W
Sbjct: 10  EKMSKVLLSLDNEYKTLRTGRINSNIFDKIYINYHGQRTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS RN
Sbjct: 70  DKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKISTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IR++  + +KK  K  + +ED +  + +DIQK TD  IK ID+  E K +EIM
Sbjct: 130 IRQELKNKVKKQEKESEITEDSLKRILDDIQKSTDLCIKRIDTILESKIQEIM 182


>gi|332670031|ref|YP_004453039.1| ribosome recycling factor [Cellulomonas fimi ATCC 484]
 gi|332339069|gb|AEE45652.1| ribosome recycling factor [Cellulomonas fimi ATCC 484]
          Length = 185

 Score =  132 bits (331), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 107/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K D  T+RTGR + +M   V V+ YGS  PL Q+A+  V E R +
Sbjct: 6   LLEAEEKMDKAVEVAKDDFATIRTGRANAAMFSKVFVDYYGSPTPLQQLASFNVTEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +DK    ++E+ + +S+LG+NP  +G V+R+ +P  TEERR   VK+A A AE ++
Sbjct: 66  LVSPFDKSSTTAIEKALRDSDLGVNPTNDGNVIRVVLPALTEERRRDFVKLAKAKAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVR++RR   + L +  K G+A ED V   E +++ +T   ++ ID     K+ E++ 
Sbjct: 126 VSVRSVRRKAKEELDRIVKDGEAGEDEVVRAEKELEALTKKHVETIDHLLASKESELLE 184


>gi|326803584|ref|YP_004321402.1| ribosome recycling factor [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651583|gb|AEA01766.1| ribosome recycling factor [Aerococcus urinae ACS-120-V-Col10a]
          Length = 186

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 117/185 (63%), Gaps = 4/185 (2%)

Query: 5   IDLQNI----KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +D+ N+    K+RM  +   L+ ++  +R G  + S+L+ + VE YG   PLNQ+A++T+
Sbjct: 1   MDINNLFTETKNRMKKSEQSLQNELGKIRAGVANASLLNGIYVEYYGVDTPLNQIASITI 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML+V+ +D+  + +++R I  S++G+ P  +G+ +R+ +P  T+ERR  L K+   
Sbjct: 61  PEPRMLMVTPYDRSALDNIDRAIQMSDIGIAPTNDGEKIRLVIPALTQERRQELSKLVGR 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +KI++RNIRRD  D +KK+ K G+ +ED     E ++QKITD   + ++    +K+
Sbjct: 121 DLEDAKIAIRNIRRDANDTIKKAEKDGEITEDDARRNEKEVQKITDEVTERLEKIASDKE 180

Query: 181 KEIMH 185
            EI++
Sbjct: 181 DEILN 185


>gi|109946849|ref|YP_664077.1| ribosome recycling factor [Helicobacter acinonychis str. Sheeba]
 gi|123362775|sp|Q17Z48|RRF_HELAH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|109714070|emb|CAJ99078.1| frr [Helicobacter acinonychis str. Sheeba]
          Length = 185

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L ++  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L +S 
Sbjct: 10  KDLMQKSIQALNREFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERAIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K  + SED     +  +QKITD  IK ID   + K+  I+
Sbjct: 130 NIRQDANNKVKKLEKDKEISEDESKKAQEQVQKITDEAIKKIDESVKNKEDAIL 183


>gi|223038376|ref|ZP_03608670.1| ribosome recycling factor [Campylobacter rectus RM3267]
 gi|222880233|gb|EEF15320.1| ribosome recycling factor [Campylobacter rectus RM3267]
          Length = 185

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 112/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   Q  K+     I  LK+D  TLRTG+V+ S++D + V+ YGS  PLNQVA +  
Sbjct: 2   LNEIYKKQ--KEHSDKCIEGLKRDFSTLRTGKVNISIVDNIYVDYYGSQTPLNQVATILT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++   I  +N+G+NP  +G+ +++  P  T E+R    K A A
Sbjct: 60  SDASTISITPWEKPMLKTITAAISAANIGVNPNNDGESVKLFFPPMTVEQRHENAKHAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + EK+K+S+RNIR+D  D +KK  K    +ED     ++++QKITDS    IDS  +EK+
Sbjct: 120 FGEKAKVSIRNIRKDANDEVKKLEKDKSITEDESKKGQDEVQKITDSYTSKIDSLVKEKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 SELL 183


>gi|313142247|ref|ZP_07804440.1| ribosome recycling factor [Helicobacter canadensis MIT 98-5491]
 gi|313131278|gb|EFR48895.1| ribosome recycling factor [Helicobacter canadensis MIT 98-5491]
          Length = 184

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 110/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++ M  +I  +KK+  TLR+G+VS ++LD +++  Y +  PLNQ+ +V   +   +V++ 
Sbjct: 9   QESMNKSIESMKKEFSTLRSGKVSVAILDHIRISYYDTPTPLNQIGSVIAQDASTIVITP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A    EK+KI++R
Sbjct: 69  WEKNLLKEIERAIQEANIGVNPNNDGETIKLFFPPMTSEQRKEIAKEAKNIGEKAKIAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  D +KK  K    SED     + +IQK+TD+ +K ID   + K++E++
Sbjct: 129 NIRKDSNDKVKKLEKDKVVSEDESKKGQEEIQKLTDNAVKKIDELVKHKEEELL 182


>gi|56751022|ref|YP_171723.1| ribosome recycling factor [Synechococcus elongatus PCC 6301]
 gi|81299318|ref|YP_399526.1| ribosome recycling factor [Synechococcus elongatus PCC 7942]
 gi|60390663|sp|Q5N3B7|RRF_SYNP6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123557390|sp|Q31QY0|RRF_SYNE7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56685981|dbj|BAD79203.1| ribosome recycling factor [Synechococcus elongatus PCC 6301]
 gi|81168199|gb|ABB56539.1| ribosome recycling factor [Synechococcus elongatus PCC 7942]
          Length = 182

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 111/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++  M  ++    +   T+RTGR + S+LD + V+ YGS  PL  +A+++  +   L
Sbjct: 3   LADVESTMQKSVEATLRSFNTIRTGRANASLLDKIVVDYYGSETPLKSLASISTPDASTL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  + ++E+ I  S++GL P  +GQ++R+ +P  T +RR  LVK+A  YAE+ K
Sbjct: 63  QIQPFDRSSMGAIEKAISLSDIGLTPNNDGQIIRLNIPPLTSDRRKELVKLAAKYAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+RRD +D ++K  KSG+ SED     ++ +QK+TD     ++    +K+K+IM
Sbjct: 123 VAIRNVRRDAIDSIRKLEKSGEISEDDARDQQDQVQKLTDKFSAKVEQLLSDKEKDIM 180


>gi|171742888|ref|ZP_02918695.1| hypothetical protein BIFDEN_02005 [Bifidobacterium dentium ATCC
           27678]
 gi|171278502|gb|EDT46163.1| hypothetical protein BIFDEN_02005 [Bifidobacterium dentium ATCC
           27678]
          Length = 186

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 107/185 (57%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    +   K +M  ++   K++   +RTGR +P++ + + V+ YG+  PL  VA + V
Sbjct: 1   MNMANIVDQAKAQMAKSVESTKENFSGIRTGRANPALFNGITVDYYGAPTPLKAVATIGV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 61  PEPRTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKG 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G   ED    L  ++ K+T  T   +D+  E K+
Sbjct: 121 KAEDGKVAVRNIRRKTKESIDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDTLLEAKQ 180

Query: 181 KEIMH 185
           KEIM 
Sbjct: 181 KEIME 185


>gi|313896240|ref|ZP_07829793.1| ribosome recycling factor [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320529259|ref|ZP_08030351.1| ribosome recycling factor [Selenomonas artemidis F0399]
 gi|312975039|gb|EFR40501.1| ribosome recycling factor [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320138889|gb|EFW30779.1| ribosome recycling factor [Selenomonas artemidis F0399]
          Length = 185

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 108/173 (62%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   I  L+++  +LR GR +P++LD V V  YG+   +NQ+A VTV EP M+V++ W+K
Sbjct: 13  MTKAIESLRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMIVITPWEK 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +E  I +S+LGL+P  +G V+R+ +P+ T+ERR  L+K      E++K+++RNIR
Sbjct: 73  SVLHDIEIAISKSDLGLSPNSDGNVIRLAIPQPTQERRKELIKTVGKKTEEAKVALRNIR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  + +KK  K  + +ED     +  +QK+ D  +K ++     K+KE+M  
Sbjct: 133 RDANEAIKKLEKDKEINEDESKRGQESVQKLVDKFVKQMEEMRAAKEKEVMEI 185


>gi|226954086|ref|ZP_03824550.1| ribosome releasing factor [Acinetobacter sp. ATCC 27244]
 gi|226835127|gb|EEH67510.1| ribosome releasing factor [Acinetobacter sp. ATCC 27244]
          Length = 184

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 109/177 (61%), Gaps = 1/177 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  L+     +RTGR  PS+L+ V V  YGS VPLNQVAN+ + + R L+
Sbjct: 7   KDAEDRMNKSLDSLEHGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANIGLEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV+++++ I E+ LGLNPI     +R+P+   TEE R  + KVA   AE +K+
Sbjct: 67  VQPFERSMVSAIDKAIREAGLGLNPIT-ADAIRVPMAALTEETRRDMQKVARNEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRD +  +K   K  + SED      ++IQKITD  +  +D     K+ E+M
Sbjct: 126 SIRNIRRDVLGDIKALLKEKEISEDDDRRASDEIQKITDKFVAEVDKRLAAKEAELM 182


>gi|302558125|ref|ZP_07310467.1| ribosome recycling factor [Streptomyces griseoflavus Tu4000]
 gi|302475743|gb|EFL38836.1| ribosome recycling factor [Streptomyces griseoflavus Tu4000]
          Length = 185

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 107/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA A AE +K
Sbjct: 66  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRRDYIKVAKAKAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 126 VSIRSVRRKAKDAIDKMIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|297622140|ref|YP_003710277.1| Ribosome recycling factor [Waddlia chondrophila WSU 86-1044]
 gi|297377441|gb|ADI39271.1| Ribosome recycling factor [Waddlia chondrophila WSU 86-1044]
          Length = 183

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 104/171 (60%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I  L  ++  +RTG+ +P+ML+ V VE YG+ + L  VA++T  EPR L+V+ +D
Sbjct: 10  KMKASIDHLTDELKKIRTGQANPAMLENVTVEVYGTSMKLRDVASITTPEPRQLLVTPYD 69

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
                 + +GI ++NLG  PIV+  V+RI +P+  E  R  +VK+ H   E++K+S+RN+
Sbjct: 70  ANNTQVIGKGIEKANLGFRPIVDANVVRITIPQMDESVRQEMVKLCHKKREEAKVSIRNV 129

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RRD  + ++K +  G+  EDM    E DIQ +TD   K  D     K+KE+
Sbjct: 130 RRDSNEAVRKQKTDGEIGEDMEKKFEKDIQILTDKYCKIADDVSSVKEKEV 180


>gi|260905212|ref|ZP_05913534.1| ribosome recycling factor [Brevibacterium linens BL2]
          Length = 185

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 108/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + F ++D  ++RTGR +P++   ++++ YG+  PL Q+A+    E R +
Sbjct: 6   LAEAREKMDKAVEFTQEDFSSIRTGRANPALFASIEIDYYGAPTPLQQLASFQTPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D+  +  +E  +  S++G NP  +G V+R+ +PE TEERR   VK+    AE  K
Sbjct: 66  LVTPYDRGALGDIETALRNSDIGANPANDGNVIRVVLPELTEERRKEYVKIVKGKAEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RNIRR   + L++ +K G A ED VA   +++  +T S + N+D    +K+ E++ 
Sbjct: 126 VSIRNIRRHAKETLERIKKDGDAGEDEVARGISELDDLTKSKVDNVDKLLNQKEAELLE 184


>gi|319901066|ref|YP_004160794.1| ribosome recycling factor [Bacteroides helcogenes P 36-108]
 gi|319416097|gb|ADV43208.1| ribosome recycling factor [Bacteroides helcogenes P 36-108]
          Length = 186

 Score =  131 bits (330), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 104/178 (58%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+ M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 8   LDEAKESMDMAVMYLEEALAHIRAGKADIRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  TIKPWDKGMFRIIEKAIIDSSLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKK+ K G A ED     E  +QKI D  IK I+     K KEIM
Sbjct: 128 VSVRNARRDAIDGLKKAVKDGLA-EDAQKGGEEKLQKIHDKYIKQIEDMLAAKDKEIM 184


>gi|237724285|ref|ZP_04554766.1| ribosome-recycling factor [Bacteroides sp. D4]
 gi|229437473|gb|EEO47550.1| ribosome-recycling factor [Bacteroides dorei 5_1_36/D4]
          Length = 186

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 108/178 (60%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   INDAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++R+ +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRIIEKAIMDSDLGITPENNGEIIRLGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN RRD +D LKK+ K G   ED   + E  +QK+ D  I+ I+    EK KEIM
Sbjct: 128 VSIRNARRDAIDTLKKAVKEG-MPEDEQKNAEAKLQKVHDKYIEKIEELLAEKDKEIM 184


>gi|270307747|ref|YP_003329805.1| ribosome recycling factor [Dehalococcoides sp. VS]
 gi|270153639|gb|ACZ61477.1| ribosome recycling factor [Dehalococcoides sp. VS]
          Length = 185

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 113/177 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  + +M  ++  L +++  +RTGR SP++++ ++VE  G   P+N +A ++  +PR +
Sbjct: 6   LQKSEKKMTASLDVLSQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLAGISAPDPRYI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  ++++E+ I +S+LGL P  +G ++R+ +P  +EERR  ++K+ +   E+ K
Sbjct: 66  TIQPWDKSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVNKRLEEDK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I++RN+RRD MD +KK  K+ + S+D +    + +QKITDS I   D    +K+ E+
Sbjct: 126 IAMRNVRRDAMDEMKKLEKAKEISQDDLKRGSDQLQKITDSFIAKADKLGADKETEL 182


>gi|308185004|ref|YP_003929137.1| ribosome recycling factor [Helicobacter pylori SJM180]
 gi|308060924|gb|ADO02820.1| ribosome recycling factor [Helicobacter pylori SJM180]
          Length = 185

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/174 (39%), Positives = 106/174 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   + +S 
Sbjct: 10  KDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTIQISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K++VR
Sbjct: 70  WEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTSEQRKLIAKDAKAMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N R+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+
Sbjct: 130 NTRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAIL 183


>gi|198283287|ref|YP_002219608.1| ribosome recycling factor [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667967|ref|YP_002425875.1| ribosome recycling factor [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198247808|gb|ACH83401.1| ribosome recycling factor [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218520180|gb|ACK80766.1| ribosome recycling factor [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 186

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 112/183 (61%), Gaps = 4/183 (2%)

Query: 7   LQNIKD----RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           +Q IK     RM  +I  LK ++  LRTGR S  +LD V+++ YG+  PL QVA+V+V +
Sbjct: 3   IQGIKKDSEARMKKSIESLKGELTRLRTGRASAGLLDHVQLDYYGAPTPLAQVASVSVAD 62

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R L+V+ W+K ++  +++ I ++ LGLNP+     +R+P+P  +EERR  +VKV     
Sbjct: 63  ARSLLVTPWEKNLIPKIDKAIRDAGLGLNPVAGSDNVRVPLPALSEERRKEMVKVVRQEG 122

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E +++++RNIRRD +  +K+  K    SED     E + QK+TD  I  +D+  E K+ +
Sbjct: 123 EGARVAIRNIRRDSISQVKELHKQKAISEDEERRAEEEFQKLTDRYIDEVDAVVEAKEAD 182

Query: 183 IMH 185
           +M 
Sbjct: 183 LME 185


>gi|73667372|ref|YP_303388.1| ribosome recycling factor [Ehrlichia canis str. Jake]
 gi|123614722|sp|Q3YR65|RRF_EHRCJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|72394513|gb|AAZ68790.1| ribosome recycling factor [Ehrlichia canis str. Jake]
          Length = 185

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 107/178 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K+RM  T+S    D+  +RTGR   S+LD + VE YG  V LN +++++V + + L+
Sbjct: 7   QDAKNRMEKTLSVYLSDIDGIRTGRARTSVLDGIVVETYGGRVKLNTISSISVSDNKTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           + VWD   + +++  I  SNLG     E   +R+ VPE T++ R  LVK+    +E  ++
Sbjct: 67  IKVWDSNNIGAIKTAIMNSNLGFGFSCEATTIRLTVPEMTQDMRKNLVKLLGKISEDCRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           SVRNIRRD MD LK  + + + SED +     +IQKITD  +K I+  F  K+KE++ 
Sbjct: 127 SVRNIRRDIMDKLKVMQDNKEISEDDLRVSGTEIQKITDDVMKKINDAFSSKEKELLQ 184


>gi|256820725|ref|YP_003142004.1| ribosome recycling factor [Capnocytophaga ochracea DSM 7271]
 gi|256582308|gb|ACU93443.1| ribosome recycling factor [Capnocytophaga ochracea DSM 7271]
          Length = 184

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 6/186 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  L+   + M + +  L K +  +R G+ SP M+  V V+ YG+  PL+QVANV
Sbjct: 1   MNEEINIILETTSEAMQEALQHLDKALANIRAGKASPQMVSSVMVDYYGAQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +  + R + +  W+K+M+  +E+ I  +NLG NP+  G+++ I VP  TEERR  LVK A
Sbjct: 61  SAPDSRTISIQPWEKKMIQPIEKAIQIANLGFNPMNNGEMVIITVPPLTEERRRELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E +KISVRN R+D    +KK     +AS+D+    E  +QK+TD  IK ++     
Sbjct: 121 KGEGEDAKISVRNARQDANKEIKKV----EASDDVKKEAEERVQKLTDKYIKKVEEVLAV 176

Query: 179 KKKEIM 184
           K+ EI+
Sbjct: 177 KEAEIL 182


>gi|311748532|ref|ZP_07722317.1| ribosome recycling factor [Algoriphagus sp. PR1]
 gi|126577048|gb|EAZ81296.1| ribosome recycling factor [Algoriphagus sp. PR1]
          Length = 186

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 107/178 (60%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+ M   +     +++ +R G+  P++LD + V+ YG+  PLNQVA+V+  + R L
Sbjct: 8   LDEAKELMQKAVDHTAAELLKIRAGKAMPNLLDGIMVQYYGAPTPLNQVASVSTPDARTL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K ++  +E+ I  S+LGL P   G+++ + +P  TEERR+ LVK A    E  K
Sbjct: 68  SIKPWEKGLIPDIEKAIINSDLGLAPQNNGELVILTIPALTEERRINLVKQAKHECENGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ISVR +R+D  D LKK +K G ASED V   E+ +QK+TD     +D   E+K+ +IM
Sbjct: 128 ISVRTVRKDTNDSLKKLQKDG-ASEDEVKRAEDVVQKLTDQYSSKLDDLLEKKEADIM 184


>gi|315223859|ref|ZP_07865707.1| ribosome recycling factor [Capnocytophaga ochracea F0287]
 gi|314946189|gb|EFS98190.1| ribosome recycling factor [Capnocytophaga ochracea F0287]
          Length = 184

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 6/186 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  L+   + M + +  L K +  +R G+ SP M+  V V+ YG+  PL+QVANV
Sbjct: 1   MNEEINIILETTSEAMQEALQHLDKALANIRAGKASPQMVSSVMVDYYGAQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +  + R + +  W+K+M+  +E+ I  +NLG NP+  G+++ I VP  TEERR  LVK A
Sbjct: 61  SAPDSRTISIQPWEKKMIQPIEKAIQIANLGFNPMNNGEMVIITVPPLTEERRKELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E +KISVRN R+D    +KK     +AS+D+    E  +QK+TD  IK ++     
Sbjct: 121 KGEGEDAKISVRNARQDANKEIKKV----EASDDVKKEAEERVQKLTDKYIKKVEEVLAV 176

Query: 179 KKKEIM 184
           K+ EI+
Sbjct: 177 KEAEIL 182


>gi|307111396|gb|EFN59630.1| hypothetical protein CHLNCDRAFT_29191 [Chlorella variabilis]
          Length = 255

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 108/180 (60%), Gaps = 8/180 (4%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV- 70
           ++M  ++  +K+   T+RTGR + +MLD ++ + YG+  PL  VA+V+  E  +LV+   
Sbjct: 73  EKMEKSVESVKRSFGTVRTGRANAAMLDRIEFDYYGAMTPLRTVASVSTPESTLLVIQAR 132

Query: 71  -------WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
                  +D   + ++ER I +S+LGL P  +G+V+R+ VP+ T ERR  +VK+     E
Sbjct: 133 ALLAAAPYDTSAIPAIERAIMQSDLGLTPNNDGRVIRLQVPQLTAERRKEMVKIVSKLGE 192

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           + K++VRN+RRD M  ++K  K G  SED    LEN +QK+TD  +K I+   + K  E+
Sbjct: 193 EGKVAVRNVRRDAMKAIEKLEKDGGISEDQRKDLENAVQKLTDEYVKEIEGLAKSKSDEL 252


>gi|283456086|ref|YP_003360650.1| ribosome Recycling Factor (RRF) [Bifidobacterium dentium Bd1]
 gi|283102720|gb|ADB09826.1| Ribosome Recycling Factor (RRF) [Bifidobacterium dentium Bd1]
          Length = 184

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 108/185 (58%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  ++D    K +M  ++   K++   +RTGR +P++ + + V+ YG+  PL  VA + V
Sbjct: 1   MANIVD--QAKAQMAKSVESTKENFSGIRTGRANPALFNGITVDYYGAPTPLKAVATIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 59  PEPRTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKG 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G   ED    L  ++ K+T  T   +D+  E K+
Sbjct: 119 KAEDGKVAVRNIRRKTKESIDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDTLLEAKQ 178

Query: 181 KEIMH 185
           KEIM 
Sbjct: 179 KEIME 183


>gi|254430178|ref|ZP_05043881.1| ribosome recycling factor [Cyanobium sp. PCC 7001]
 gi|197624631|gb|EDY37190.1| ribosome recycling factor [Cyanobium sp. PCC 7001]
          Length = 179

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 105/162 (64%)

Query: 23  KDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERG 82
           ++  T+RTGR +PS+LD + VE YG+  PL  +A+++  + + + +  +D   +  +E+ 
Sbjct: 16  RNFNTIRTGRANPSLLDKISVEYYGAETPLKSLASLSTPDSQTIQIQPFDTGAMGLIEKA 75

Query: 83  IHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKK 142
           I  S+LGL    +G+V+RI +P  TE+RR  L K+A  YAE+ K+++RN RRDG+D +KK
Sbjct: 76  IAMSDLGLTCNNDGRVIRINIPPLTEDRRKELCKIAAKYAEEGKVALRNNRRDGIDRIKK 135

Query: 143 SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
             K G+ SED     ++ +QK+TD  I+ ++   +EK+ EI+
Sbjct: 136 QEKDGELSEDQSRDEQDKVQKLTDKFIEELEKHLKEKEAEIL 177


>gi|189219823|ref|YP_001940464.1| Ribosome recycling factor [Methylacidiphilum infernorum V4]
 gi|238692086|sp|B3DXF7|RRF_METI4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189186681|gb|ACD83866.1| Ribosome recycling factor [Methylacidiphilum infernorum V4]
          Length = 186

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 112/178 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   ++++ +LR+G+  P +L  V VEAY +H+ L  +A +T  +  +L
Sbjct: 7   LLEAEEKMEKAVEKTRQELASLRSGKAHPEILSNVSVEAYETHMKLKDLAAITAPDANLL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  WD  +V S+ + I ES LGLNPIV+ +++RIP+P  +EERRL L++VA   +E+ +
Sbjct: 67  IVQPWDLTLVDSIRKAIEESKLGLNPIVDAKLIRIPIPPLSEERRLELIRVARKISEEGR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + +R +RR  ++ LKK  K    SED +   E +IQK+TD  I+ ID     K+K++M
Sbjct: 127 VGIRAVRRHCLEELKKLEKEAHLSEDELERAEKEIQKLTDEYIEKIDRILAAKEKDLM 184


>gi|325298509|ref|YP_004258426.1| Ribosome-recycling factor [Bacteroides salanitronis DSM 18170]
 gi|324318062|gb|ADY35953.1| Ribosome-recycling factor [Bacteroides salanitronis DSM 18170]
          Length = 186

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 104/178 (58%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   I +L+  +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 8   LSSAEEKMDMAIMYLEDALAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRIIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKK+ K G   ED   + E  +QK  D  IK ID     K KEIM
Sbjct: 128 VSVRNARRDAIDALKKAVKDG-MPEDEQKNSEAKLQKTHDKYIKQIDDLLAAKDKEIM 184


>gi|296139389|ref|YP_003646632.1| ribosome recycling factor [Tsukamurella paurometabola DSM 20162]
 gi|296027523|gb|ADG78293.1| ribosome recycling factor [Tsukamurella paurometabola DSM 20162]
          Length = 185

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 107/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  ++D  ++RTGR +PSM   V V+ YGS  P+ Q++++T  E R++
Sbjct: 6   LFDAEEKMEKAVSVAREDFQSIRTGRANPSMFAKVMVDYYGSPTPITQISSITTPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +GQ++R+ +P+ TEERR  LVK   +  E +K
Sbjct: 66  VIKPYEANQLGNIETAIRNSDLGVNPTNDGQLIRVGIPQLTEERRKELVKQVKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RN+RR   + + K  K G A ED  +  E D+ K T      ID   + K+ ++M 
Sbjct: 126 VSIRNVRRKANEQIAKFVKDGDAGEDEGSRAEKDLDKTTAKYTAQIDDLVKHKEADLME 184


>gi|123965820|ref|YP_001010901.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9515]
 gi|166230816|sp|A2BVI3|RRF_PROM5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123200186|gb|ABM71794.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9515]
          Length = 182

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 108/177 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I+  M  ++   +++  T+RTGR + S+LD + VE YG+  P+  +A++  ++ + + 
Sbjct: 4   QEIQSSMNKSVEATQRNFNTIRTGRANASLLDRISVEYYGAETPIKSLASIATVDSQTIS 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISCLQAIEKAISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD +D  KK  K G  S D     + +IQK TD  I  I++   EK+KEI+
Sbjct: 124 ALRNIRRDAVDKEKKDEKEGLISIDESRDNQLEIQKFTDKYISLIETKLSEKEKEIL 180


>gi|154250177|ref|YP_001411002.1| ribosome recycling factor [Fervidobacterium nodosum Rt17-B1]
 gi|171769433|sp|A7HN62|RRF_FERNB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|154154113|gb|ABS61345.1| ribosome recycling factor [Fervidobacterium nodosum Rt17-B1]
          Length = 184

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  ++  + +++  LRTGR +P++L+ +K++ YG   P+ QVA VT  E R L
Sbjct: 6   IKTTEEKMKKSVEKIAEELKHLRTGRATPAVLEEIKIDYYGVPTPVLQVAQVTT-EERQL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W++ ++  +E+ I  S+LGL P+ +G V+RI  P  T E+R   VK A    E+ K
Sbjct: 65  VIKPWERNLLNVIEKAILASDLGLTPVNDGTVVRINFPTPTTEQRQKWVKKAKEIVEEGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD +  +K  +K+G+ SED    LE +IQ +TD  +  +D  FE+K+KEIM F
Sbjct: 125 VAVRNIRRDILKDIKDKKKAGEISEDDEKRLEKEIQNLTDKYVAELDKLFEKKEKEIMEF 184


>gi|57168360|ref|ZP_00367494.1| ribosome recycling factor [Campylobacter coli RM2228]
 gi|305432776|ref|ZP_07401935.1| ribosome recycling factor [Campylobacter coli JV20]
 gi|57020168|gb|EAL56842.1| ribosome recycling factor [Campylobacter coli RM2228]
 gi|304444173|gb|EFM36827.1| ribosome recycling factor [Campylobacter coli JV20]
          Length = 185

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 113/184 (61%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++++ Q  K +   ++  LKKD  TLRTG+V+  +LD ++V+ YGS  PLNQVA V  
Sbjct: 2   INEILNKQ--KTQSEKSLEALKKDFTTLRTGKVNTHILDHIQVDYYGSLTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPMLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+SVRNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSVRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTAKIDESVKNKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 SELL 183


>gi|261337802|ref|ZP_05965686.1| ribosome recycling factor [Bifidobacterium gallicum DSM 20093]
 gi|270277256|gb|EFA23110.1| ribosome recycling factor [Bifidobacterium gallicum DSM 20093]
          Length = 184

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 105/175 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD+M  T+   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V EPR L ++ 
Sbjct: 9   KDQMAKTVESTKENFSGIRTGRANPALLNGIVVDYYGAPTPLKAVATIGVPEPRTLSITP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D     +VE+ + +S+LG +P  +G V+R+ +PE T ERR   VK+A   AE  K++VR
Sbjct: 69  FDASQTNAVEKALRDSDLGASPRRDGNVIRLTMPELTGERRKEYVKLAKTKAEDGKVAVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR   + + K+ K G+  ED    L  ++ K+T      +D+  E K+KEIM 
Sbjct: 129 NIRRKAKEAIDKAVKDGEMGEDEGDRLLKELDKLTKQVTDELDTLLEAKQKEIME 183


>gi|190573499|ref|YP_001971344.1| ribosome recycling factor [Stenotrophomonas maltophilia K279a]
 gi|229890169|sp|B2FIA5|RRF_STRMK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|190011421|emb|CAQ45039.1| putative ribosome recycling factor [Stenotrophomonas maltophilia
           K279a]
          Length = 184

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 108/177 (61%), Gaps = 3/177 (1%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYG-SHVPLNQVANVTVLEPRMLV 67
           N + RM  +I  LK  + ++RTGR +P++LD V V AYG +  PLNQVA+++  +   L+
Sbjct: 8   NAQTRMAKSIDALKHTLTSIRTGRATPALLDRVTVNAYGNASTPLNQVASISNADAHSLL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +DK M+  +E+G++  N    P   G  +RI +P  TEERR  LVK      E +KI
Sbjct: 68  VTPFDKGMIKEIEKGLY--NAEFTPNTLGTAIRINMPPPTEERRKELVKQVQKEGEGAKI 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIR+D    + K  K    SED     E+DIQK+TD+ IK++D    +K+KE++
Sbjct: 126 AIRNIRQDANKEIAKLVKDKAISEDEKKRGEDDIQKLTDTNIKDVDKVVADKEKELL 182


>gi|51598384|ref|YP_072572.1| ribosome recycling factor [Borrelia garinii PBi]
 gi|60390245|sp|Q662P1|RRF_BORGA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|51572955|gb|AAU06980.1| ribosome releasing factor [Borrelia garinii PBi]
          Length = 184

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 107/173 (61%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+  W
Sbjct: 10  EKMSKVLLSLDNEYKTLRTGRISSNVFDKIFIQYHGQKTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ K+S RN
Sbjct: 70  DKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKVSTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IR+D  + +KK  K  + +ED +  + +DIQK  D  IK ID+  E K +EIM
Sbjct: 130 IRQDLNNKVKKQEKESEITEDSLKRILDDIQKSIDIYIKRIDTILESKIQEIM 182


>gi|150004420|ref|YP_001299164.1| ribosome recycling factor [Bacteroides vulgatus ATCC 8482]
 gi|212693687|ref|ZP_03301815.1| hypothetical protein BACDOR_03207 [Bacteroides dorei DSM 17855]
 gi|237708852|ref|ZP_04539333.1| ribosome recycling factor [Bacteroides sp. 9_1_42FAA]
 gi|254882855|ref|ZP_05255565.1| ribosome recycling factor [Bacteroides sp. 4_3_47FAA]
 gi|265755888|ref|ZP_06090355.1| ribosome recycling factor [Bacteroides sp. 3_1_33FAA]
 gi|294775495|ref|ZP_06741007.1| ribosome recycling factor [Bacteroides vulgatus PC510]
 gi|319643384|ref|ZP_07998010.1| ribosome-recycling factor [Bacteroides sp. 3_1_40A]
 gi|166230412|sp|A6L1H8|RRF_BACV8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149932844|gb|ABR39542.1| ribosome recycling factor [Bacteroides vulgatus ATCC 8482]
 gi|212663746|gb|EEB24320.1| hypothetical protein BACDOR_03207 [Bacteroides dorei DSM 17855]
 gi|229457278|gb|EEO62999.1| ribosome recycling factor [Bacteroides sp. 9_1_42FAA]
 gi|254835648|gb|EET15957.1| ribosome recycling factor [Bacteroides sp. 4_3_47FAA]
 gi|263233966|gb|EEZ19567.1| ribosome recycling factor [Bacteroides sp. 3_1_33FAA]
 gi|294450640|gb|EFG19128.1| ribosome recycling factor [Bacteroides vulgatus PC510]
 gi|317385013|gb|EFV65966.1| ribosome-recycling factor [Bacteroides sp. 3_1_40A]
          Length = 186

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 107/178 (60%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   INDAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++R+ +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRIIEKAIMDSDLGITPENNGEIIRLGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN RRD +D LKK+ K G   ED   + E  +QK+ D  I  I+    EK KEIM
Sbjct: 128 VSIRNARRDAIDTLKKAVKEG-MPEDEQKNAEAKLQKVHDKYIAKIEELLAEKDKEIM 184


>gi|194365040|ref|YP_002027650.1| ribosome recycling factor [Stenotrophomonas maltophilia R551-3]
 gi|238693463|sp|B4SQ19|RRF_STRM5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|194347844|gb|ACF50967.1| ribosome recycling factor [Stenotrophomonas maltophilia R551-3]
          Length = 184

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 107/177 (60%), Gaps = 3/177 (1%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYG-SHVPLNQVANVTVLEPRMLV 67
           N + RM  +I  LK  + ++RTGR +P++LD V V AYG +  PLNQVA+++  +   L+
Sbjct: 8   NAQTRMAKSIDALKHTLTSIRTGRATPALLDRVTVNAYGNASTPLNQVASISNADAHSLL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +DK M+  +E+G++  N    P   G  +RI +P  TEERR  L K      E +KI
Sbjct: 68  VTPFDKSMIKEIEKGLY--NAEFTPNTLGTAIRINMPPPTEERRKELAKQVQKEGEGAKI 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIR+D    + K  K    SED     E+DIQK+TD+ IK++D    +K+KE++
Sbjct: 126 AIRNIRQDANKEIAKLDKDKAISEDEKKRGEDDIQKLTDANIKDVDKVVADKEKELL 182


>gi|32265940|ref|NP_859972.1| ribosome recycling factor [Helicobacter hepaticus ATCC 51449]
 gi|39932102|sp|Q7VJ10|RRF_HELHP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|32261989|gb|AAP77038.1| ribosome releasing factor [Helicobacter hepaticus ATCC 51449]
          Length = 185

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            +N K  M  +I  L++D  TLR+G+VS ++LD V+V+ YG+  PLNQV +V   +   +
Sbjct: 6   FKNAKSHMDKSIESLRRDFSTLRSGKVSVNILDNVRVDYYGTPTPLNQVGSVIAQDATTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K ++  +E+ I E+N+G+NP  + + +++  P  T+E+R  + K A +  EK+K
Sbjct: 66  IITPWEKPLIKDIEKSIQEANIGVNPNSDSECVKLFFPPMTQEQRKEIAKNARSMGEKAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIR+D  + +KK  K    +ED       +IQ+ TD  +K  D   + K++E+M
Sbjct: 126 VAIRNIRQDANNAIKKLEKDKSITEDENKKALEEIQRYTDEFVKKCDEMLKHKEEEVM 183


>gi|282897920|ref|ZP_06305915.1| Ribosome recycling factor [Raphidiopsis brookii D9]
 gi|281197064|gb|EFA71965.1| Ribosome recycling factor [Raphidiopsis brookii D9]
          Length = 182

 Score =  130 bits (328), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 105/170 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+   ++   ++RTGR + S+LD V+V+ YGS  PL  ++N+T  +   +++  +D+
Sbjct: 10  MNKTVEATQRAFNSIRTGRANASLLDKVQVDYYGSPTPLKSLSNITTPDASTILIQPYDR 69

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  VE+ I  S++GL P  +G V+R+ +P  T +RR  LVK+A  YAE+ ++ +RNIR
Sbjct: 70  SSLNIVEKAISLSDVGLTPSNDGSVVRLNIPPLTSDRRKELVKLAAKYAEEGRVGIRNIR 129

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RD +D ++K  K+G+ SED     ++ +QKIT      ID    EK+K+I
Sbjct: 130 RDALDSIRKQEKAGEISEDESRDQQDKLQKITGKYTAKIDELLAEKEKDI 179


>gi|33239972|ref|NP_874914.1| ribosome recycling factor [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|39932093|sp|Q7VD62|RRF_PROMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33237498|gb|AAP99566.1| Ribosome recycling factor [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 182

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 108/177 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q ++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + L 
Sbjct: 4   QEVELNMQKSVEACQRNFNTIRTGRANTSLLDRLTVEYYGADTPLKSLATISTPDSQTLA 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +  +E+ I  S+LG  P  +G+++RI +P  TEERR    K+A  YAE++KI
Sbjct: 64  IQPFDLGSLGLIEKAISISDLGFTPNNDGKIIRINIPPLTEERRKQFCKLASKYAEEAKI 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRD ++ +K S K G+ SED     ++ IQKIT+  I  I+     K++EI+
Sbjct: 124 SLRNIRRDAIEKIKGSEKDGEFSEDQSRDQQDSIQKITNKYINEIEKNLSGKEEEIL 180


>gi|159028125|emb|CAO89732.1| frr [Microcystis aeruginosa PCC 7806]
          Length = 182

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 107/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++D M  T+   ++   T+RTGR + S+LD + VE YG   PL  +A ++  +   +
Sbjct: 3   LAEVQDHMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  + ++E+ I  S++GL P  +GQ +R+ +P  T +RR  LVK+A   AE+ K
Sbjct: 63  AIQPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD +D ++K  KS + SED    L++ +QK TD  I  I+     K+K+IM
Sbjct: 123 VAVRNIRRDAIDAIRKQEKSHEISEDESRDLQDQVQKSTDKFIAKIEDLLTTKEKDIM 180


>gi|219684827|ref|ZP_03539769.1| ribosome recycling factor [Borrelia garinii PBr]
 gi|219671772|gb|EED28827.1| ribosome recycling factor [Borrelia garinii PBr]
          Length = 184

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 107/173 (61%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+  W
Sbjct: 10  EKMSKVLLSLDNEYKTLRTGRISSNVFDKIFIQYHGQKTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ K+S RN
Sbjct: 70  DKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTNERRQDIVKHAKKIAEEHKVSTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IR+D  + +KK  K  + +ED +  + +DIQK  D  IK ID+  E K +EIM
Sbjct: 130 IRQDLNNKVKKQEKESEITEDNLKRILDDIQKSIDIYIKRIDTILESKIQEIM 182


>gi|315453412|ref|YP_004073682.1| ribosome recycling factor [Helicobacter felis ATCC 49179]
 gi|315132464|emb|CBY83092.1| ribosome recycling factor [Helicobacter felis ATCC 49179]
          Length = 185

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 109/174 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M  ++  L +D  TLR+G+VS S+++ V+V+ YG+  PLNQV +V   +   L ++ 
Sbjct: 10  QNQMHKSLEALLRDFTTLRSGKVSISLVENVRVDYYGTPTPLNQVGSVIASDASTLSITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +ER + E+NLG NP  +G+ +++  P  T E+R  + K A    EK+K++VR
Sbjct: 70  WEKNLLKDIERALQEANLGANPNNDGESVKLFFPPMTSEQRKEIAKEAKGMGEKAKVAVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D  + +KK  K    SED       ++QKITDS IK I+   + K++EI+
Sbjct: 130 NIRQDANNQIKKLEKDKAISEDQGKKALAEVQKITDSAIKKIEEVLKHKEEEIL 183


>gi|325286740|ref|YP_004262530.1| Ribosome-recycling factor [Cellulophaga lytica DSM 7489]
 gi|324322194|gb|ADY29659.1| Ribosome-recycling factor [Cellulophaga lytica DSM 7489]
          Length = 185

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 107/186 (57%), Gaps = 5/186 (2%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  L + K+ M  TI  L+K  + +R G+ SP ML  V V+ YGS  PL+QVANV
Sbjct: 1   MNEEINFILDSTKESMNGTIDHLEKAFIKIRAGKASPVMLSSVMVDYYGSATPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + V  W+K M+  +E+ I  SNLG NP+  G  + I VP  TEERR  L K A
Sbjct: 61  NTPDARTISVQPWEKNMLQEIEKAIMNSNLGFNPMNNGDFVIINVPPLTEERRRDLAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              A+ +KI +RN R++     K+ R    ASED+  + E D+Q +T+   K ID+    
Sbjct: 121 KGEADDAKIGIRNARQEAN---KEIRALDDASEDLKKNAEADVQDLTNLYTKKIDALLVT 177

Query: 179 KKKEIM 184
           K+ EIM
Sbjct: 178 KEAEIM 183


>gi|269127613|ref|YP_003300983.1| ribosome recycling factor [Thermomonospora curvata DSM 43183]
 gi|268312571|gb|ACY98945.1| ribosome recycling factor [Thermomonospora curvata DSM 43183]
          Length = 185

 Score =  130 bits (328), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 74/179 (41%), Positives = 112/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K+D   +RTGRV+P+M   +  + YG+  P+NQ+A+ T+ EPRM+
Sbjct: 6   LFEAEEKMEKAVAVAKEDFAGIRTGRVTPAMFSKITADYYGTPTPINQLASFTLPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V V+DK  + +VE+ I ES+LG+NP  +G V+R+  PE +EERR   VK+A   AE+S+
Sbjct: 66  IVQVFDKSSLPAVEKAIRESDLGVNPTNDGNVIRVVFPELSEERRREYVKIAGNKAEESR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+RNIRR   D L K  K G+A ED V   E ++   T   +  ID   E KK E++ 
Sbjct: 126 ISIRNIRRRAKDSLDKLAKEGEAGEDEVRRAEKELDDATHKYVAKIDELLEHKKAELLE 184


>gi|291514370|emb|CBK63580.1| ribosome recycling factor [Alistipes shahii WAL 8301]
          Length = 185

 Score =  130 bits (327), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 107/172 (62%), Gaps = 1/172 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   I  L+++++ +R G+ SP+ L+ V V+ +GS VP++  A+VTV + R +++  WD
Sbjct: 13  RMQKAIDHLEEELLNVRAGKASPNALNGVMVDYFGSQVPVSGAASVTVPDARTILIQPWD 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+  +E+ I +SN+GL P   G+ +R+ +P  TEERR  LVK   A AE ++IS+RN 
Sbjct: 73  KNMLRPIEKAIIDSNIGLTPSNNGEQIRLTIPPLTEERRKELVKQVRAEAETARISLRNA 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD ++  KK++K G   ED     E   QK+ +   K +D    +K+KEIM
Sbjct: 133 RRDAVEAFKKAQKEG-MPEDESKDGETQSQKLLEKFSKTLDEALSKKEKEIM 183


>gi|224025759|ref|ZP_03644125.1| hypothetical protein BACCOPRO_02500 [Bacteroides coprophilus DSM
           18228]
 gi|224018995|gb|EEF76993.1| hypothetical protein BACCOPRO_02500 [Bacteroides coprophilus DSM
           18228]
          Length = 186

 Score =  130 bits (327), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 102/174 (58%), Gaps = 1/174 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   I +L + +  +R G+    +LD +KV++YGS VP+N VA VT  + R + +  
Sbjct: 12  EEKMDMAIMYLDESLAHIRAGKADVRLLDGIKVDSYGSMVPINNVAAVTTPDARSIAIKP 71

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK M   +E+ I +S LG+ P   G+++R+ +P  TEERR  L K      E +K+SVR
Sbjct: 72  WDKSMFRVIEKAIIDSELGIMPENNGEIIRLGIPPLTEERRKQLAKQCKGEGETAKVSVR 131

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N RRD +D LKK+ K G   ED   + E  +QK+ D  IK ID     K KEIM
Sbjct: 132 NARRDAIDALKKAVKDG-MPEDEQKNSEAKLQKVHDKYIKQIDDMLAAKDKEIM 184


>gi|71892056|ref|YP_277786.1| ribosome recycling factor [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|123641045|sp|Q493C9|RRF_BLOPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|71796162|gb|AAZ40913.1| ribosome recycling factor [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 188

 Score =  130 bits (327), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 106/173 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   I   K ++  +  GR+SP++L+ ++V+ YG   PL+QVAN  V + R L ++V+D 
Sbjct: 16  MKKCIKNFKTNINNIHIGRISPNILNNIRVDYYGISTPLSQVANAIVEDSRTLAITVFDH 75

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
           +++ S E+ I  S+L L PI  G  +R+ +P  TEERR  L+K+    AEKSKI+VR++R
Sbjct: 76  QLIKSTEKAIFMSDLELIPISYGNTIRVTLPALTEERRHTLIKMVRTEAEKSKIAVRSVR 135

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           R   D  K   K+ + +ED     +N+IQK+T+  IK ID    EK+ E+M F
Sbjct: 136 RIANDKTKILLKNKEINEDEEHFFQNEIQKLTNIWIKEIDIILAEKESELMKF 188


>gi|332665961|ref|YP_004448749.1| ribosome-recycling factor [Haliscomenobacter hydrossis DSM 1100]
 gi|332334775|gb|AEE51876.1| Ribosome-recycling factor [Haliscomenobacter hydrossis DSM 1100]
          Length = 188

 Score =  130 bits (327), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 113/178 (63%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ +++M   I  LK ++  + TG+ SP+++  + V  YG+  P++QVA+V+  + R +
Sbjct: 10  MEDAEEQMDKAIEHLKIELSKITTGKASPALVTSLMVAYYGTPTPMSQVASVSTSDSRTI 69

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W++ M+A +E+ I E+NLG+ P+ +GQV+R+ +P  TEERR  LVK      E+SK
Sbjct: 70  VIQPWERSMLAPIEKSIFEANLGVTPMNDGQVVRLSIPPLTEERRRDLVKRCAHLGEESK 129

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + VR+ RRD ++ +KK+ K+G   ED+   LE D   ++   I  +D   + K+KEIM
Sbjct: 130 VGVRSGRRDAIEAIKKAVKNG-TPEDLGKKLEEDADNLSKRYIGQVDELVKGKEKEIM 186


>gi|291278553|ref|YP_003495388.1| ribosome recycling factor Frr [Deferribacter desulfuricans SSM1]
 gi|290753255|dbj|BAI79632.1| ribosome recycling factor Frr [Deferribacter desulfuricans SSM1]
          Length = 185

 Score =  130 bits (327), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            + +K +M  ++++ K+++  +RTGR S ++ + +KV+ YG+  P+ QVA + V +PR++
Sbjct: 6   FEEVKSKMEKSVAYYKEELKGVRTGRASAALFENIKVDYYGTPTPIPQVATIQVPDPRLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  MV  +E+ I  S +G NP  +G+++R+P+P  TEERR  L+K+ +  AE+++
Sbjct: 66  TIQPWEPNMVPVIEKAIMNSGMGFNPSNDGKMIRVPIPPLTEERRKELMKLVNKMAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +RN RR G D +KK  K  + SED        IQ++T+  IK ID    +K+KEIM  
Sbjct: 126 VVIRNERRYGNDKIKKLEKEKEISEDEAKKALEKIQELTNEYIKKIDEITAKKEKEIMEL 185


>gi|294650307|ref|ZP_06727675.1| ribosome recycling factor [Acinetobacter haemolyticus ATCC 19194]
 gi|292823837|gb|EFF82672.1| ribosome recycling factor [Acinetobacter haemolyticus ATCC 19194]
          Length = 184

 Score =  130 bits (327), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 109/177 (61%), Gaps = 1/177 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  L+     +RTGR  PS+L+ V V  YGS VPLNQVAN+ + + R L+
Sbjct: 7   KDAEDRMNKSLDSLEHGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANIGLEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV+++++ I E+ LGLNPI     +R+P+   TEE R  + KVA   AE +K+
Sbjct: 67  VQPFERSMVSAIDKAIREAGLGLNPIT-ADAIRVPMAALTEETRRDMQKVARNEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD +  +K   K  + SED      ++IQKITD  +  +D     K+ E+M
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDDDRRASDEIQKITDKFVAEVDKRLAAKEAELM 182


>gi|242080283|ref|XP_002444910.1| hypothetical protein SORBIDRAFT_07g001230 [Sorghum bicolor]
 gi|241941260|gb|EES14405.1| hypothetical protein SORBIDRAFT_07g001230 [Sorghum bicolor]
          Length = 265

 Score =  130 bits (327), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 108/176 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M   I  ++ +  T+RTGR +P+MLD ++VE YG+ V L  +A ++  +   L++  
Sbjct: 90  KEKMEKAIETVQTNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLLIQP 149

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +E+ I  +NLG+ P  +G+V+R+ VP  T +RR  L K     +E  K+++R
Sbjct: 150 YDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLSEDGKVAIR 209

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD +    K +K  K SED V  L  D+QK+TD  +K IDS  ++K++E+M  
Sbjct: 210 NIRRDAIKAYDKLQKEKKLSEDNVKDLSADLQKVTDEYMKKIDSIQKQKEQELMKI 265


>gi|298207395|ref|YP_003715574.1| ribosome recycling factor [Croceibacter atlanticus HTCC2559]
 gi|83850031|gb|EAP87899.1| ribosome recycling factor [Croceibacter atlanticus HTCC2559]
          Length = 185

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 104/178 (58%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + K+ M   I  L+K ++ +R G+ SP+ML  V V+ YGS  PLNQV NV   + R +
Sbjct: 9   IDSTKEDMEKAIKHLEKKLINIRAGKASPAMLSGVMVDYYGSPTPLNQVGNVNTPDARTI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  ++K M+  +E+ I  +NLG NP+  G+ + I VP  TEERR  L K A   AE+SK
Sbjct: 69  SIQPFEKSMIQEIEKAIMNANLGFNPMNNGESVIINVPPLTEERRKELAKQAKNEAEESK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I VRN R++    +KK      ASED+  + E D+Q +TD  I  ID  +  K+ EIM
Sbjct: 129 IGVRNDRKNANQEIKKLE---DASEDLKKNAEIDVQNLTDKYIAKIDEVYAAKEVEIM 183


>gi|120555456|ref|YP_959807.1| ribosome recycling factor [Marinobacter aquaeolei VT8]
 gi|120325305|gb|ABM19620.1| ribosome recycling factor [Marinobacter aquaeolei VT8]
 gi|302608192|emb|CBW44445.1| ribosome recycling factor [Marinobacter hydrocarbonoclasticus]
          Length = 196

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 99/157 (63%)

Query: 28  LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           +RTGR  P++LD V V  YG   PL QVA+V V + R L V+ W+K +V ++E+ I  S+
Sbjct: 38  IRTGRAHPAILDSVMVNYYGQETPLKQVASVNVEDNRTLTVAPWEKNLVPTIEKAIMTSD 97

Query: 88  LGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSG 147
           LGLNP   G ++R+P+P  TEE R  +VK A A AE  ++S+RN RRD    +K+  K  
Sbjct: 98  LGLNPATSGDIIRVPMPMLTEETRKEMVKQAKADAEHGRVSIRNARRDANHMIKELVKEK 157

Query: 148 KASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + SED     E++IQK+TD  I  ++   + K++++M
Sbjct: 158 EISEDDQHRGEDEIQKLTDKYIAEVEKMLKSKEEDLM 194


>gi|224438526|ref|ZP_03659446.1| ribosome recycling factor [Helicobacter cinaedi CCUG 18818]
 gi|313144953|ref|ZP_07807146.1| ribosome recycling factor [Helicobacter cinaedi CCUG 18818]
 gi|313129984|gb|EFR47601.1| ribosome recycling factor [Helicobacter cinaedi CCUG 18818]
          Length = 185

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 109/176 (61%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N K  M  TI  L++D  TLR+G+VS S+LD ++++ YG+  PLNQV +V   +   +++
Sbjct: 8   NAKSHMEKTIESLRRDFSTLRSGKVSISILDNIRIDYYGTPTPLNQVGSVIAQDATTIII 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + W+K ++  +E+ I E+N+G+NP  + + +++  P  T+E+R  + K A +  EK+K++
Sbjct: 68  TPWEKPLLKDIEKAIQEANIGVNPNSDSECVKLFFPPMTQEQRKEIAKQAKSMGEKAKVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +RNIR+D  + +KK  K    +ED      ++IQK TD  +K  D     K++E+M
Sbjct: 128 IRNIRQDSNNGIKKLEKDKDITEDEGKKGLDEIQKYTDEFVKKCDDMVRHKEEEVM 183


>gi|307722053|ref|YP_003893193.1| ribosome recycling factor [Sulfurimonas autotrophica DSM 16294]
 gi|306980146|gb|ADN10181.1| ribosome recycling factor [Sulfurimonas autotrophica DSM 16294]
          Length = 185

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 109/172 (63%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I  +++D  TLRTG+V+ S+LD VK++ YG+  PL+QV +V   +   +V++ W+
Sbjct: 12  KMQGSIEHMQRDFKTLRTGKVTTSVLDNVKIDYYGTPTPLDQVGSVLAADATTIVINPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  +E  I+ +N+G+NP  +G ++++  P  T E+R   VK      E +K+S+RN 
Sbjct: 72  KNLLPDIESAINAANIGVNPNNDGDLIKLFFPPMTVEQRQESVKKMKTMGENAKVSIRND 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD  D +KK  K  + ++D   S ++++QKITD  I  +DS  ++K+ EI+
Sbjct: 132 RRDANDKIKKLEKDKEITQDESKSAQDNVQKITDKYITKVDSILKDKEAEIL 183


>gi|302392360|ref|YP_003828180.1| ribosome recycling factor [Acetohalobium arabaticum DSM 5501]
 gi|302204437|gb|ADL13115.1| ribosome recycling factor [Acetohalobium arabaticum DSM 5501]
          Length = 185

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 110/173 (63%), Gaps = 2/173 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M + I  +K D   +RTGR  PS+++ +  + YG+  P+NQ+A V+  EPR LV+  WD
Sbjct: 12  KMEEVIDEVKDDFDQIRTGRAKPSLIEGITADYYGTKTPINQMAKVSAPEPRQLVIQPWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             ++  +E+ I +S+L L+P  +G+V+RI +P+ TEE+R   V +A+  AE+ +I +RN+
Sbjct: 72  DGVLEDIEKAIMKSDLDLSPNNDGEVIRINIPKLTEEKRKEYVSLANDKAEEHRIEIRNL 131

Query: 133 RRDGMDHLKKSRKSGKASEDMV-ASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+  D L++   +G+ SED     LEN IQ +TD  I  +D   ++K++ I+
Sbjct: 132 RREANDELEELETAGEISEDNYHRGLEN-IQDLTDEYIAKVDELLDKKEEAIL 183


>gi|295106079|emb|CBL03622.1| ribosome recycling factor [Gordonibacter pamelaeae 7-10-1-b]
          Length = 180

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 104/176 (59%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM   ++ L +   ++RTGR S  +LD +KV+ YG   P+NQ+A +   +  MLV+  
Sbjct: 5   EERMERALASLGEAFGSVRTGRASALLLDRIKVDYYGVPTPVNQMAGIKTPDAHMLVIEP 64

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK ++ ++E  I ES+LG+ P  +G  +R+P P  TEERR  LVK    YAE+++++VR
Sbjct: 65  WDKGVLGAIEHAIMESDLGVTPSNDGSCIRLPFPSLTEERRRELVKQCKNYAEEARVAVR 124

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
             R+D    L +  K     ED     + ++QK+TD  +  +D  F++K+ E+M  
Sbjct: 125 KARQDANAALDRCVKDDNLPEDDERRAQAEVQKLTDKYVAQVDEAFKKKEAEVMEI 180


>gi|148926382|ref|ZP_01810066.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145844774|gb|EDK21879.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 183

 Score =  129 bits (325), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 107/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V   +   +
Sbjct: 4   LTNKKPKSEKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLASDASTI 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A  EK+K
Sbjct: 64  SITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKAMGEKAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+ E++
Sbjct: 124 VSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKSKESELL 181


>gi|313813385|gb|EFS51099.1| ribosome recycling factor [Propionibacterium acnes HL025PA1]
 gi|327334225|gb|EGE75939.1| ribosome recycling factor [Propionibacterium acnes HL097PA1]
          Length = 184

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ + +MG  +   +++   +RTGR +P+M + + VE Y +  PL Q+A+  V E R +
Sbjct: 5   IKDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYDTPTPLQQLASFQVPEARTV 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  V  VE+ I +S+LG+NP  +G V+R  +P  TEERR   +K+A   AE+ +
Sbjct: 65  LIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKAEEGR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RR   D +KK  K  + SED +  LE ++ ++T   ++ ID   + K+ E++  
Sbjct: 125 IAVRNVRRASNDVVKKQEKDKEISEDEMTRLEKELDQVTRKYVEQIDELLKSKESELLEI 184


>gi|116669931|ref|YP_830864.1| ribosome recycling factor [Arthrobacter sp. FB24]
 gi|172044060|sp|A0JUP4|RRF_ARTS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116610040|gb|ABK02764.1| ribosome recycling factor [Arthrobacter sp. FB24]
          Length = 185

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 104/174 (59%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           D+M   +   K+D  ++RTGR +P + + V V+ YGS  PL Q+A+  V + R ++++ +
Sbjct: 11  DKMDKAVEVAKEDFASIRTGRATPGLYNRVLVDYYGSPTPLQQLASFAVPDARTILITPF 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  +  +ER + +S +G NP  +G V+RI +PE T+ERR   VK+  A  E +K+S+RN
Sbjct: 71  DKTALRDIERALSDSEVGANPSNDGNVIRITIPELTKERRKEYVKIVKAKGEDAKVSIRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IRR   + L K  K G+A ED  A  E ++  +T + +  ID   + K+ E++ 
Sbjct: 131 IRRKAKETLDKLVKDGEAGEDEGARGEKELDALTKAHVDGIDDLLKRKEAELLE 184


>gi|256371432|ref|YP_003109256.1| ribosome recycling factor [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008016|gb|ACU53583.1| ribosome recycling factor [Acidimicrobium ferrooxidans DSM 10331]
          Length = 190

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 108/179 (60%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L   +DRM   +   +++  T+RTGR   ++LD + VE YG  VPL Q+A+VT  +P  
Sbjct: 10  ELAAFEDRMAKAVRHTEEEFATVRTGRAQAALLDGIVVEYYGERVPLRQLASVTTPDPHS 69

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L+++ +D+  + ++ER I +S+LG+NP  +G V+RI +   TEERR  LVKV    AE+ 
Sbjct: 70  LLIAPYDRNAMGAMERAIRDSDLGVNPTNDGSVIRIAIAPLTEERRRELVKVVRKRAEEG 129

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++R +RR    H +  ++ G  + D +A +E  + ++T   +  +D   E K+ +++
Sbjct: 130 RVAIRGVRRQAKQHFESLQRQGSLTTDDLADIERSLDRLTARFVGELDRALEVKEHDLL 188


>gi|147669001|ref|YP_001213819.1| ribosome recycling factor [Dehalococcoides sp. BAV1]
 gi|146269949|gb|ABQ16941.1| ribosome recycling factor [Dehalococcoides sp. BAV1]
          Length = 173

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 110/170 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++  L +++  +RTGR SP++++ ++VE  G   P+N +AN++  +PR + +  WD+
Sbjct: 1   MSASLDVLLQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLANISAPDPRYITIQPWDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             ++++E+ I +S+LGL P  +G ++R+ +P  +EERR  ++K+ +   E+ KI++RN+R
Sbjct: 61  SCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKIVNKRLEEDKIAMRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RD MD +KK  K+ + S+D +    + +QKITD+ I   D    +K+ E+
Sbjct: 121 RDAMDEMKKLEKAKEISQDDLKRGSDQLQKITDNFIAKADKLGADKEAEL 170


>gi|239928669|ref|ZP_04685622.1| ribosome recycling factor [Streptomyces ghanaensis ATCC 14672]
          Length = 186

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 7   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA A  E +K
Sbjct: 67  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREFIKVAKAKGEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R +RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 127 VSIRAVRRKAKDAIDKLIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 185


>gi|328885353|emb|CCA58592.1| Ribosome recycling factor [Streptomyces venezuelae ATCC 10712]
          Length = 186

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 7   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAITPINQLASFSVPEPRMA 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA   AE SK
Sbjct: 67  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREYIKVAKGKAEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+R++RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 127 ISIRSVRRKAKETIDKFVKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 185


>gi|291436992|ref|ZP_06576382.1| ribosome recycling factor [Streptomyces ghanaensis ATCC 14672]
 gi|291339887|gb|EFE66843.1| ribosome recycling factor [Streptomyces ghanaensis ATCC 14672]
          Length = 185

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA A  E +K
Sbjct: 66  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREFIKVAKAKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R +RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 126 VSIRAVRRKAKDAIDKLIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|87123906|ref|ZP_01079756.1| ribosome recycling factor protein Rrf [Synechococcus sp. RS9917]
 gi|86168475|gb|EAQ69732.1| ribosome recycling factor protein Rrf [Synechococcus sp. RS9917]
          Length = 182

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 100/158 (63%)

Query: 27  TLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHES 86
           T+RTGR + S+LD + VE YG+  PL  +A ++  + + + +  +D   +A++E+ I  S
Sbjct: 23  TIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQIQPFDLSALAAIEKAIAMS 82

Query: 87  NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKS 146
            LG  P  +G+V+RI VP  TEERR    K+A  YAE+ K+++RNIRRD +D +KK  K 
Sbjct: 83  ELGFTPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVALRNIRRDAIDKVKKQEKE 142

Query: 147 GKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           G+ SED     ++ +QK+TD  I  I++   +K+ +I+
Sbjct: 143 GEISEDQSRDEQDKVQKLTDRFIAAIETHLADKEADIL 180


>gi|145343357|ref|XP_001416314.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576539|gb|ABO94607.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 176

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 104/172 (60%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  T+  +  D  T+RTGR + ++LD ++V+ YG+  PL  +AN +  + + + +  +
Sbjct: 2   ERMEKTMDAIANDFSTVRTGRANAAVLDRIEVDYYGAPTPLKTIANASTPDAQTITIQPF 61

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  +  +ER I+ES+LG+NP  +G ++R+ VP  T ERR  L K+     E  K+++RN
Sbjct: 62  DKSAIKDIERAINESDLGMNPSNDGNIIRLNVPPLTAERRKELAKLVSKLGEDGKVALRN 121

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +RRD M   +K  K+G   ED +A L+  ++ +T S +K +D   + K+ E+
Sbjct: 122 VRRDAMKAYEKLEKAGSFGEDEIAKLKKSMEDLTASYVKKVDELTKAKETEL 173


>gi|116491008|ref|YP_810552.1| ribosome recycling factor [Oenococcus oeni PSU-1]
 gi|118586854|ref|ZP_01544288.1| ribosome recycling factor [Oenococcus oeni ATCC BAA-1163]
 gi|122276810|sp|Q04F85|RRF_OENOB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116091733|gb|ABJ56887.1| ribosome recycling factor [Oenococcus oeni PSU-1]
 gi|118432686|gb|EAV39418.1| ribosome recycling factor [Oenococcus oeni ATCC BAA-1163]
          Length = 180

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 117/183 (63%), Gaps = 3/183 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +IDL+ +K+RMG      + +++ +R GR +P++L+ ++VE YG+  PLNQ+A+V + E 
Sbjct: 1   MIDLKEVKERMGKVSKAFQNELINIRAGRANPNILNKIQVEYYGAPTPLNQLASVQIPEA 60

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R+L+++ +DK  + ++E+ I  S+LGL P  +G  +R+ +P+ TE+ R  LVK   A AE
Sbjct: 61  RVLLITPYDKTSLKAIEQAIFASDLGLTPQNDGSAIRLIIPQLTEDSRKELVKQVKAEAE 120

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K+K++ RN R D M  LK   K    SED     E+DIQK TD  IK+ID   + K+KE+
Sbjct: 121 KAKVAARNTRHDFMSDLK---KDNDLSEDSRHRTEDDIQKATDLEIKDIDRIADIKEKEL 177

Query: 184 MHF 186
           M  
Sbjct: 178 MEI 180


>gi|290890488|ref|ZP_06553563.1| hypothetical protein AWRIB429_0953 [Oenococcus oeni AWRIB429]
 gi|290479884|gb|EFD88533.1| hypothetical protein AWRIB429_0953 [Oenococcus oeni AWRIB429]
          Length = 180

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/183 (40%), Positives = 117/183 (63%), Gaps = 3/183 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +IDL+ +K+RMG      + +++ +R GR +P++L+ ++VE YG+  PLNQ+A+V + E 
Sbjct: 1   MIDLKEVKERMGKVSKAFQNELINIRAGRANPNILNKIQVEYYGTPTPLNQLASVQIPEA 60

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R+L+++ +DK  + ++E+ I  S+LGL P  +G  +R+ +P+ TE+ R  LVK   A AE
Sbjct: 61  RVLLITPYDKTSLKAIEQAIFASDLGLTPQNDGSAIRLIIPQLTEDSRKELVKQVKAEAE 120

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K+K++ RN R D M  LK   K    SED     E+DIQK TD  IK+ID   + K+KE+
Sbjct: 121 KAKVAARNTRHDFMSDLK---KDNDLSEDSRHRTEDDIQKATDLEIKDIDRIADIKEKEL 177

Query: 184 MHF 186
           M  
Sbjct: 178 MEI 180


>gi|154149092|ref|YP_001405963.1| ribosome recycling factor [Campylobacter hominis ATCC BAA-381]
 gi|166230774|sp|A7I0C2|RRF_CAMHC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|153805101|gb|ABS52108.1| ribosome recycling factor [Campylobacter hominis ATCC BAA-381]
          Length = 185

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 109/184 (59%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N V D Q  K      ++ LK+D  TLRTG+VS  +L+ + V+ Y +  PLNQVA V  
Sbjct: 2   LNSVYDAQ--KSDCNKALNALKRDFSTLRTGKVSVKILENIFVDYYDNQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + V+ W+K M+  +E  I  +N+G+NP  +G+ +++  P  T E+R    K A A
Sbjct: 60  TDATTISVTPWEKSMLKGIESAIAAANIGVNPTNDGESVKLFFPPMTTEQRKENAKKAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QKITD+ I+ ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDGVKKLEKDKSISEDEAKKAYDEVQKITDNFIEKIDEAVKNKE 179

Query: 181 KEIM 184
           +E++
Sbjct: 180 EELL 183


>gi|58337544|ref|YP_194129.1| ribosome recycling factor Rrf [Lactobacillus acidophilus NCFM]
 gi|58254861|gb|AAV43098.1| ribosome recycling factor Rrf [Lactobacillus acidophilus NCFM]
          Length = 164

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 99/146 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D MG +I   +K + ++R G  + ++LD V+VE YG+  PL Q+++VT+ EPR+L
Sbjct: 6   IKKAQDNMGKSIKVYQKKLASVRAGVANAALLDNVQVEYYGAPTPLTQMSSVTIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTSERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASED 152
           I+VRN+RR+ MD LKK  K+G  +ED
Sbjct: 126 IAVRNVRREAMDSLKKEEKNGDITED 151


>gi|282898680|ref|ZP_06306668.1| Ribosome recycling factor [Cylindrospermopsis raciborskii CS-505]
 gi|281196548|gb|EFA71457.1| Ribosome recycling factor [Cylindrospermopsis raciborskii CS-505]
          Length = 182

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 104/170 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+   ++   ++RTGR + S+LD V+V+ YGS   L  +AN+T  +   +++  +D+
Sbjct: 10  MNKTVEATQRAFNSIRTGRANASLLDKVQVDYYGSPTSLKSLANITTPDATTILIQPYDR 69

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  VE+ I  S++GL P  +G V+R+ +P  T +RR  LVK+A  YAE+ ++ +RNIR
Sbjct: 70  TSLNIVEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKELVKLAAKYAEEGRVGIRNIR 129

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RD +D ++K  K+G+ SED     ++ +QKIT      ID    EK+K+I
Sbjct: 130 RDALDSIRKQEKAGEVSEDESRDQQDKLQKITSKYTAKIDELLAEKEKDI 179


>gi|257784511|ref|YP_003179728.1| ribosome recycling factor [Atopobium parvulum DSM 20469]
 gi|257473018|gb|ACV51137.1| ribosome recycling factor [Atopobium parvulum DSM 20469]
          Length = 181

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/176 (38%), Positives = 102/176 (57%), Gaps = 3/176 (1%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K  M   I  LK +   +RTGR +P  LD +KV+ YG   P++Q+A + V E  ML+V  
Sbjct: 9   KQSMEKCIEALKNNFGRVRTGRANPHALDHIKVDYYGQPTPISQLAAIKVPEASMLLVEP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK  + S+E+ I  S+LG+ P  +G  +R+P P  TEERR  L K     AE++++++R
Sbjct: 69  WDKTALKSIEKAIESSDLGITPSNDGSAIRLPFPMPTEERRRELAKECSQIAEEARVAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRD    +++     + SED     +N IQK+TD+ I  I+S  + K  EIM  
Sbjct: 129 NVRRDINGKIERDE---ELSEDDQKREKNGIQKLTDTYIAQIESLLKTKTSEIMEI 181


>gi|189463438|ref|ZP_03012223.1| hypothetical protein BACCOP_04157 [Bacteroides coprocola DSM 17136]
 gi|189429867|gb|EDU98851.1| hypothetical protein BACCOP_04157 [Bacteroides coprocola DSM 17136]
          Length = 186

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 102/178 (57%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I +L+  +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 8   LSGAEEKMDMAIMYLEDALAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRVIEKAIIDSELGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN RRD +D LKK+ K G   ED   + E  +QK  D  IK ID     K KEIM
Sbjct: 128 VSVRNARRDAIDALKKAVKDG-MPEDEQKNSEAKLQKSHDKYIKQIDDMLAAKDKEIM 184


>gi|290957080|ref|YP_003488262.1| ribosome recycling factor [Streptomyces scabiei 87.22]
 gi|260646606|emb|CBG69703.1| ribosome recycling factor [Streptomyces scabiei 87.22]
          Length = 186

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 7   LLEAEEKMEKAVVVAKDDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA + AE SK
Sbjct: 67  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRRDYIKVARSKAEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R +RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 127 VSIRAVRRKAKDAIDKLVKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 185


>gi|119487064|ref|ZP_01620936.1| ribosome releasing factor [Lyngbya sp. PCC 8106]
 gi|119455993|gb|EAW37127.1| ribosome releasing factor [Lyngbya sp. PCC 8106]
          Length = 182

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 104/177 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++  M   +   ++   T+RTGR + S+LD V VE YG+   L  +A +   +   +
Sbjct: 3   LAEVESLMQKAVESTQRSFNTIRTGRANTSLLDRVMVEYYGTPTSLKSLATINTPDSSTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D++ +  +E+ I  S++GL P  +G ++R+ +P  T ERR   VK+A  YAE+ K
Sbjct: 63  MIQPFDRKTLDIIEKAISLSDVGLTPNNDGSIIRLNIPPLTSERRQEFVKLASKYAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +SVRN+RRD +D ++K  KS   SED    L++ IQK+TD     ID  FE K K+I
Sbjct: 123 VSVRNVRRDAVDSVRKQEKSKDLSEDEARDLQDQIQKLTDKYTAKIDEMFEAKDKDI 179


>gi|115472897|ref|NP_001060047.1| Os07g0570700 [Oryza sativa Japonica Group]
 gi|158513666|sp|A2YMU2|RRFC_ORYSI RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=Protein OsL8; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
 gi|158513703|sp|A3BLC3|RRFC_ORYSJ RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=Protein OsL8; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
 gi|34394208|dbj|BAC84660.1| putative Ribosome recycling factor, chloroplast precursor [Oryza
           sativa Japonica Group]
 gi|113611583|dbj|BAF21961.1| Os07g0570700 [Oryza sativa Japonica Group]
 gi|218199871|gb|EEC82298.1| hypothetical protein OsI_26546 [Oryza sativa Indica Group]
 gi|222637311|gb|EEE67443.1| hypothetical protein OsJ_24808 [Oryza sativa Japonica Group]
          Length = 266

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 107/176 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM   I  ++ +  T+RTGR +P+MLD ++VE YG+ V L  +A +   +   L++  
Sbjct: 91  RERMEKAIETVQNNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQINTPDATSLLIQP 150

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +E+ I  +NLG+ P  +G+V+R+ VP  T +RR  L K     AE+ K+++R
Sbjct: 151 YDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLAEEGKVAIR 210

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD +    K  K  K SED V  L  D+QK+TD  +K I++  ++K++E+M  
Sbjct: 211 NIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIEAIQKQKEQELMKI 266


>gi|158313016|ref|YP_001505524.1| ribosome recycling factor [Frankia sp. EAN1pec]
 gi|238686845|sp|A8L6D6|RRF_FRASN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|158108421|gb|ABW10618.1| ribosome recycling factor [Frankia sp. EAN1pec]
          Length = 185

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 109/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +S  K D   +RTGR++P++   V V+ YG+  P+ Q+A+  + EPRM+
Sbjct: 6   LLEAEEKMDKAVSVAKDDFANIRTGRITPAVFGKVLVDYYGAPTPVQQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + +VE+ + +S+LG+NP  +G ++R   PE +E+RR  LVKVA   AE+++
Sbjct: 66  IITPYDKSSLGAVEKAVRDSDLGVNPSNDGTIIRCVFPELSEQRRRDLVKVARTKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRR   D + +  + G+A ED     E D+ + T   +  +D     K+ +++
Sbjct: 126 VSIRNIRRHAKDAIDRIVRDGEAGEDEGRRGEKDLDEATHRYVSQVDELLRIKESDLL 183


>gi|317508973|ref|ZP_07966606.1| ribosome recycling protein [Segniliparus rugosus ATCC BAA-974]
 gi|316252738|gb|EFV12175.1| ribosome recycling protein [Segniliparus rugosus ATCC BAA-974]
          Length = 185

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 105/175 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM   +   K +   +RTGR + S+   V V+ YG+  P+ QV++V   +PR++V+  
Sbjct: 10  EERMELAVEVAKDEFAAIRTGRATASLFAKVVVDYYGTPTPIPQVSSVQTPDPRLVVIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++   + ++E  I +S+LGLNP  +GQV+R+ +P  TEERR    K A   AE+++++VR
Sbjct: 70  YEASQLRAIEEAIQKSDLGLNPSNDGQVVRVAIPALTEERRKEFAKQARGKAEEARVTVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+RR   D L K  K G+A ED V   E ++ K+T   +  ID   ++K+ E++ 
Sbjct: 130 NVRRKANDQLGKLAKEGQAGEDDVVRAEKELDKLTAKFVGTIDELVKKKEAELLE 184


>gi|88807685|ref|ZP_01123197.1| ribosome releasing factor [Synechococcus sp. WH 7805]
 gi|88788899|gb|EAR20054.1| ribosome releasing factor [Synechococcus sp. WH 7805]
          Length = 182

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 107/176 (60%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           +++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + +
Sbjct: 5   DLESSMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQI 64

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   +AS+E+ I  S LG  P  +G+V+RI VP  TEERR    K+A  YAE+ K++
Sbjct: 65  QPFDISALASIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVA 124

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +RN+RRD +D +KK  K G  SED     +++IQK+T+  I  ++     K+ +I+
Sbjct: 125 LRNLRRDAIDKIKKQEKDGDLSEDQSRDQQDEIQKLTNQFIAELEKHLATKEADIL 180


>gi|166365795|ref|YP_001658068.1| ribosome recycling factor [Microcystis aeruginosa NIES-843]
 gi|189044061|sp|B0JKT7|RRF_MICAN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166088168|dbj|BAG02876.1| ribosome releasing factor [Microcystis aeruginosa NIES-843]
          Length = 182

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 107/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++D+M  T+   ++   T+RTGR + S+LD + VE YG   PL  +A ++  +   +
Sbjct: 3   LAEVQDQMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  + ++E+ I  S++GL P  +GQ +R+ +P  T +RR  LVK+A   AE+ K
Sbjct: 63  AIQPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD +D ++K  K  + SED    L++ +QK TD  I  I+     K+K+IM
Sbjct: 123 VAIRNIRRDAIDAIRKREKGHEISEDESRDLQDQVQKSTDKFIAKIEDLLTTKEKDIM 180


>gi|315123821|ref|YP_004065825.1| ribosome releasing factor [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017543|gb|ADT65636.1| ribosome releasing factor [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 185

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQ--KTQSEKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAATNIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKNKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 SELL 183


>gi|302762955|ref|XP_002964899.1| hypothetical protein SELMODRAFT_83448 [Selaginella moellendorffii]
 gi|302809577|ref|XP_002986481.1| hypothetical protein SELMODRAFT_124362 [Selaginella moellendorffii]
 gi|300145664|gb|EFJ12338.1| hypothetical protein SELMODRAFT_124362 [Selaginella moellendorffii]
 gi|300167132|gb|EFJ33737.1| hypothetical protein SELMODRAFT_83448 [Selaginella moellendorffii]
          Length = 192

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 109/170 (64%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  TI  +K +  T+RTGR SP++LD V+VE YG+ V L  +A ++  +   ++V  +
Sbjct: 22  ERMEKTIETVKSNFNTIRTGRASPALLDRVEVEYYGTLVLLKTIAQISTPDGSTILVQPF 81

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D+  ++++++ I +S+LGL P  +G V+R+ +P+ T ERR  L+K+     E+ K+++RN
Sbjct: 82  DRSSLSAIDKAITKSDLGLTPSNDGIVIRLNIPQLTAERRKELLKLVAKLTEEGKVALRN 141

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +RRD +   +K  K  K S D V  L  ++Q++TD  +K +D  F++K+K
Sbjct: 142 VRRDAIKSYEKLEKEKKISTDNVKDLSTEMQRLTDEYVKTVDDLFKQKEK 191


>gi|226497262|ref|NP_001150478.1| ribosome recycling factor [Zea mays]
 gi|195639534|gb|ACG39235.1| ribosome recycling factor [Zea mays]
          Length = 264

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 107/176 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M   I  ++ +  T+RTGR +P+MLD ++VE YG+ V L  +A ++  +   L++  
Sbjct: 89  KEKMEKAIETVQANFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLLIQP 148

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +E+ I  +NLG+ P  +G+V+R+ VP  T +RR  L K     AE  K+++R
Sbjct: 149 YDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELSKTVAKLAEDGKVAIR 208

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD +    K  K  K SED V  L  D+QK+TD  +K I+S  ++K++E+M  
Sbjct: 209 NIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIESIQKQKEQELMKI 264


>gi|291448100|ref|ZP_06587490.1| ribosome recycling factor [Streptomyces roseosporus NRRL 15998]
 gi|291351047|gb|EFE77951.1| ribosome recycling factor [Streptomyces roseosporus NRRL 15998]
          Length = 185

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 105/173 (60%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R+I
Sbjct: 72  KTALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEYIKVAKTKAEDSKISIRSI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   ++L K  K  ++ ED V   E ++   T   +  +D   + K+ E++ 
Sbjct: 132 RRKAKENLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|283769070|ref|ZP_06341976.1| ribosome recycling factor [Bulleidia extructa W1219]
 gi|283104427|gb|EFC05804.1| ribosome recycling factor [Bulleidia extructa W1219]
          Length = 182

 Score =  129 bits (323), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 107/172 (62%), Gaps = 3/172 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +  L+ ++ T+RTG  +  ++D V+ + YG+  PLNQ+A ++V E R +V+  +D
Sbjct: 12  KMDKVMDHLQSELNTVRTGMANAKLMDRVEADYYGTPTPLNQIAGISVSEGRTIVIKPYD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              +  +ER  +E+NLG+ P  +G V+R+ VP+ T E R  + K     AE+SKI +RNI
Sbjct: 72  PSSLKEIERACNEANLGMAPQNDGTVIRLTVPQLTGETRKEMSKKVGQIAEESKIQIRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD M+ +KK +   +  EDM   +EN+IQK+TD  +K ID   + K+ E++
Sbjct: 132 RRDAMNVVKKDK---EMDEDMQKDMENEIQKLTDKYVKKIDEQAKAKEAEVL 180


>gi|17228703|ref|NP_485251.1| ribosome recycling factor [Nostoc sp. PCC 7120]
 gi|22001942|sp|Q8YXK4|RRF_ANASP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|17130555|dbj|BAB73165.1| ribosome recycling factor [Nostoc sp. PCC 7120]
          Length = 182

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 108/177 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + +M  T+   ++   T+RTGR + S+LD V V+ YGS  PL  +AN++  +   +
Sbjct: 3   LAEAESKMQHTVEATQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +  VE+ I  S++GL P  +G V+R+ +P  T +RR  LVK+A  YAE+ +
Sbjct: 63  LIQPYDKSSLNIVEKAISLSDVGLTPSNDGAVIRLNIPPLTSDRRKELVKIAAKYAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD +D ++K  K+ + SED     ++ +QK+T+     ID    EK+K+I
Sbjct: 123 VAIRNIRRDAVDSIRKLEKNAEVSEDEAKDQQDKLQKLTNKYTARIDELLVEKEKDI 179


>gi|288922418|ref|ZP_06416606.1| ribosome recycling factor [Frankia sp. EUN1f]
 gi|288346221|gb|EFC80562.1| ribosome recycling factor [Frankia sp. EUN1f]
          Length = 185

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 109/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +S  K+D   +RTGR++P++   V V+ YG+  P+ Q+A+  + EPRM+
Sbjct: 6   LLEAEEKMDKAVSVAKEDFGNIRTGRITPAVFGKVLVDYYGAPTPVQQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + +VE+ + +S+LG+NP  +G ++R   PE +E+RR  LVKVA   AE+++
Sbjct: 66  IITPYDKSSLGAVEKAVRDSDLGVNPSNDGAIIRCVFPELSEQRRRELVKVARTKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRR   D + +  + G A ED     E D+ + T   +  +D     K+ +++
Sbjct: 126 VSIRNIRRHAKDAIDRIVRDGDAGEDEGRRGEKDLDEATHRYVAQVDELLRIKESDLL 183


>gi|320008276|gb|ADW03126.1| ribosome recycling factor [Streptomyces flavogriseus ATCC 33331]
          Length = 185

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 104/173 (60%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R+I
Sbjct: 72  KTALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEFIKVAKTKAEDSKISIRSI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   + L K  K  ++ ED V   E ++   T   +  +D   + K+ E++ 
Sbjct: 132 RRKAKESLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|225011201|ref|ZP_03701661.1| ribosome recycling factor [Flavobacteria bacterium MS024-3C]
 gi|225004662|gb|EEG42624.1| ribosome recycling factor [Flavobacteria bacterium MS024-3C]
          Length = 184

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 104/186 (55%), Gaps = 6/186 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ +D  L + K+ M   ++ L+K    +R G+ SP ML  VKV+ YGS  PL+QVANV
Sbjct: 1   MNEEVDFILDSAKENMDRAMAHLEKSFAKIRAGKASPIMLSTVKVDYYGSPTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + V  W+K M+  +E+ I  +NLG NP+  G ++ I VP  TEERR  LVK A
Sbjct: 61  NTTDARTISVQPWEKNMLQEIEKAITNANLGFNPMNNGDLIIINVPPLTEERRRDLVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE +KI VRN R++      K  K     ED     E  IQ++T+   K I+     
Sbjct: 121 KAEAEDAKIGVRNARQEA----NKDIKGTDLPEDTAKDAEASIQELTNQYSKKIEELLTV 176

Query: 179 KKKEIM 184
           K+ EIM
Sbjct: 177 KEAEIM 182


>gi|239944636|ref|ZP_04696573.1| ribosome recycling factor [Streptomyces roseosporus NRRL 15998]
 gi|239991100|ref|ZP_04711764.1| ribosome recycling factor [Streptomyces roseosporus NRRL 11379]
          Length = 186

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 105/173 (60%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 13  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R+I
Sbjct: 73  KTALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEYIKVAKTKAEDSKISIRSI 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   ++L K  K  ++ ED V   E ++   T   +  +D   + K+ E++ 
Sbjct: 133 RRKAKENLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLE 185


>gi|57237294|ref|YP_178307.1| ribosome recycling factor [Campylobacter jejuni RM1221]
 gi|86151424|ref|ZP_01069639.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|62900783|sp|Q5HWM8|RRF_CAMJR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|57166098|gb|AAW34877.1| ribosome recycling factor [Campylobacter jejuni RM1221]
 gi|85841771|gb|EAQ59018.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315057664|gb|ADT71993.1| Ribosome recycling factor [Campylobacter jejuni subsp. jejuni S3]
          Length = 185

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQ--KTQSEKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKNKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 SELL 183


>gi|297821238|ref|XP_002878502.1| hypothetical protein ARALYDRAFT_907901 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324340|gb|EFH54761.1| hypothetical protein ARALYDRAFT_907901 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 275

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 109/177 (61%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K +M  TI  L+    ++RTGR + +MLD ++VE YGS V L  +A ++  +   L++
Sbjct: 98  DVKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLL 157

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +DK  + ++E+ I  S+LG+ P  +G V+R+ +P  T ERR  L KV    +E+ K++
Sbjct: 158 QPYDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSERRKELSKVVAKQSEEGKVA 217

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD +    K  K  K SED V  L +D+QK+ D  +K I+  +++K+KE+M 
Sbjct: 218 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEKELMK 274


>gi|157414532|ref|YP_001481788.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           81116]
 gi|172047024|sp|A8FK24|RRF_CAMJ8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157385496|gb|ABV51811.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           81116]
 gi|315932033|gb|EFV10986.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 327]
          Length = 185

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQ--KTQSEKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKSKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 SELL 183


>gi|257459905|ref|ZP_05625011.1| ribosome recycling factor [Campylobacter gracilis RM3268]
 gi|257442757|gb|EEV17894.1| ribosome recycling factor [Campylobacter gracilis RM3268]
          Length = 185

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 103/171 (60%), Gaps = 1/171 (0%)

Query: 15  GD-TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           GD  I  LKKD  TLRTG+VS ++LD + V+ YGS  PLNQVA V   +   + ++ W+K
Sbjct: 13  GDRAIEALKKDFTTLRTGKVSVAILDHILVDYYGSQTPLNQVATVLSTDAVTISITPWEK 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M+ ++E  I  +N+G+NP  +G+ +++  P  T E+R    K A A  EK+KI +RN+R
Sbjct: 73  PMLKAIESAIAAANIGVNPTNDGESVKLFFPPMTVEQRQENAKKAKAMGEKAKIGIRNVR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +D  D +KK  K    SED      +++QKITDS    ID   + K+ E++
Sbjct: 133 KDANDEIKKLEKDKAISEDDAKKGYDEVQKITDSYSAKIDDAVKAKEAELL 183


>gi|224034227|gb|ACN36189.1| unknown [Zea mays]
          Length = 264

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 107/176 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M   I  ++ +  T+RTGR +P+MLD ++VE YG+ V L  +A ++  +   L++  
Sbjct: 89  KEKMEKAIETVQANFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLLIQP 148

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +E+ I  +NLG+ P  +G+V+R+ VP  T +RR  L K     AE  K+++R
Sbjct: 149 YDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELSKTVAKLAEDGKVAIR 208

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD +    K  K  K SED V  L  D+QK+TD  +K I+S  ++K++E+M  
Sbjct: 209 NIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIESIQKQKEQELMKI 264


>gi|198274241|ref|ZP_03206773.1| hypothetical protein BACPLE_00381 [Bacteroides plebeius DSM 17135]
 gi|198272916|gb|EDY97185.1| hypothetical protein BACPLE_00381 [Bacteroides plebeius DSM 17135]
          Length = 186

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/174 (39%), Positives = 102/174 (58%), Gaps = 1/174 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   + +L + +  +R G+    +LD ++V++YGS VP+N VA VT  + R + +  
Sbjct: 12  EEKMDMAVMYLDESLAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVTTPDARSIAIKP 71

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK M   +E+ I +S LG+ P   G+++RI +P  TEERR  L K      E +K+SVR
Sbjct: 72  WDKSMFRVIEKAIIDSELGIMPENNGEIIRIGIPPLTEERRKQLSKQCKGEGETAKVSVR 131

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N RRD +D LKK+ K G   ED   + E  +QK+ D  IK ID     K KEIM
Sbjct: 132 NARRDAIDALKKAVKDG-MPEDEQKNSEAKLQKVHDKYIKQIDDMLAAKDKEIM 184


>gi|113953351|ref|YP_731208.1| ribosome recycling factor [Synechococcus sp. CC9311]
 gi|122945600|sp|Q0I8L4|RRF_SYNS3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|113880702|gb|ABI45660.1| ribosome recycling factor [Synechococcus sp. CC9311]
          Length = 182

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 105/171 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   +++  T+RTGR +PS+LD + VE YG+  PL  +A+++  + + + V  +D 
Sbjct: 10  MRKSVEATQRNFNTIRTGRANPSLLDRINVEYYGADTPLKSLASLSTPDSQTIAVQPFDM 69

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +A +E+ I  S+LG  P  +G+++RI VP  TEERR    K+A  Y+E+ K+++R++R
Sbjct: 70  GSLALIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLAAKYSEEGKVALRSVR 129

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD +D +KK  K G  SED     ++ +QK TD  I  ++    +K+ EI+
Sbjct: 130 RDAIDKIKKQEKEGDLSEDQSRDEQDQVQKTTDRFIAELEKHLADKEVEIL 180


>gi|332877581|ref|ZP_08445325.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684430|gb|EGJ57283.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 184

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 6/186 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  L +  + M + +  L K +  +R G+ SP ML  V V+ YG+  PL+QVANV
Sbjct: 1   MNEEINIILDSTSEAMQEALQHLDKALGNIRAGKASPQMLGSVMVDYYGAQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + +  W+K+M+  +E+ I  +NLG NP+  G+++ I VP  TEERR  LVK A
Sbjct: 61  AAPDSRTITIQPWEKKMIQPIEKAIQIANLGFNPMNNGEMVIISVPPLTEERRKELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E +KISVRN R++    +KK     + S+D+    E  +QK+TD  IK ++     
Sbjct: 121 KGEGEDAKISVRNARQEANKEIKKV----ETSDDIKKDAEERVQKLTDKYIKKVEEVLAA 176

Query: 179 KKKEIM 184
           K+ EI+
Sbjct: 177 KEAEIL 182


>gi|213962598|ref|ZP_03390860.1| ribosome recycling factor [Capnocytophaga sputigena Capno]
 gi|213954924|gb|EEB66244.1| ribosome recycling factor [Capnocytophaga sputigena Capno]
          Length = 184

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 6/184 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N ++D  N  + M + +  L K +  +R G+ SP M+  V V+ YG+  PL+QVANV+ 
Sbjct: 5   INIILDTTN--EAMQEALQHLDKALGNIRAGKASPQMVSSVMVDYYGAQTPLSQVANVSA 62

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + +  W+K+M+  +E+ I  +NLG NP+  G+++ I VP  TEERR  LVK A  
Sbjct: 63  PDSRTISIQPWEKKMIQPIEKAIQIANLGFNPMNNGEMVIITVPPLTEERRRELVKQAKG 122

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +KISVRN R+D    +KK     + S+D+    E  +QK+TD  IK ++     K+
Sbjct: 123 EGEDAKISVRNARQDANKEIKKV----ETSDDIKKDAEERVQKLTDKYIKKVEEVLAAKE 178

Query: 181 KEIM 184
            EI+
Sbjct: 179 AEIL 182


>gi|330466307|ref|YP_004404050.1| ribosome recycling factor [Verrucosispora maris AB-18-032]
 gi|328809278|gb|AEB43450.1| ribosome recycling factor [Verrucosispora maris AB-18-032]
          Length = 185

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 108/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K++   +RTGR +P+M   + ++ YGS  PL Q+A+V + EPRM 
Sbjct: 6   LLEAEEKMERAVEHAKEEFGAIRTGRATPAMFSKIIIDYYGSPTPLTQMASVAIPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   + ++E+ I +S+LG+NP  EG  LRI +P+ TEERR  ++KVA    E++K
Sbjct: 66  IIKPYDNSQINAMEKAIRDSDLGVNPNNEGNQLRILLPQMTEERRRDMIKVARHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRR G + L +  K G+  ED     E ++  +T   + ++D   + K+ E++
Sbjct: 126 VAIRNIRRKGKEELDRLVKDGEVGEDDGRRAEKELDDLTQRYVAHVDELVKHKETELL 183


>gi|219683778|ref|YP_002470161.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|254809492|sp|B8DUA6|RRF_BIFA0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219621428|gb|ACL29585.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 184

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 110/185 (59%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  V+D    K++M  ++   K++   +RTGR +P++L+ + VE YG+  PL  VA + V
Sbjct: 1   MANVVD--QSKEQMKKSVESTKENFAGIRTGRANPALLNGIVVEYYGAPTPLKHVATIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P   G  + + +PE TE+RR   VK+A +
Sbjct: 59  PEPRTLSVTPFDPSQANAVEKALRDSDLGASPRRNGSAILLTMPELTEDRRKEYVKLAKS 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G+  ED    L  ++ K+T +T   +D+  E K+
Sbjct: 119 KAEDGKVAVRNIRRKSKEAIDKAVKDGEMGEDEGDRLLKELDKVTKATTDELDALLEAKQ 178

Query: 181 KEIMH 185
           KEIM 
Sbjct: 179 KEIME 183


>gi|205356536|ref|ZP_03223299.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345541|gb|EDZ32181.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 187

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 4   LNEIFNKQ--KTQSEKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 61

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 62  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 121

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 122 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKSKE 181

Query: 181 KEIM 184
            E++
Sbjct: 182 SELL 185


>gi|88658452|ref|YP_507088.1| ribosome recycling factor [Ehrlichia chaffeensis str. Arkansas]
 gi|123493752|sp|Q2GHJ5|RRF_EHRCR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|88599909|gb|ABD45378.1| ribosome recycling factor [Ehrlichia chaffeensis str. Arkansas]
          Length = 185

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 109/180 (60%), Gaps = 4/180 (2%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K RM  ++S    D+  +RTGR   S+L+ + VE YG  V LN +++V+V + + L+
Sbjct: 7   QDAKSRMEKSLSVYLSDIDGIRTGRARTSVLNGIVVETYGGRVKLNTISSVSVSDNKTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           + VWD   + +++  I  SNLG     E   +R+ VP+ T++ R  LVK+    +E  ++
Sbjct: 67  IKVWDSNNIGAIKTAIMNSNLGFGISCEATTIRLTVPDMTQDMRKNLVKLLGKISEDCRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASED--MVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           S+RNIRRD MD LK  + S + SED   VA +E  IQKITD  +K ++  F  K+KE++H
Sbjct: 127 SIRNIRRDIMDRLKVMQDSKEISEDDLRVAGVE--IQKITDDIMKKVNDAFTSKEKELLH 184


>gi|282861391|ref|ZP_06270456.1| ribosome recycling factor [Streptomyces sp. ACTE]
 gi|282564049|gb|EFB69586.1| ribosome recycling factor [Streptomyces sp. ACTE]
          Length = 185

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 104/173 (60%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R++
Sbjct: 72  KSALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEFIKVAKTKAEDSKISIRSV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   + L K  K  ++ ED V   E ++   T   +  +D   + K+ E++ 
Sbjct: 132 RRKAKESLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|289178551|gb|ADC85797.1| Ribosome Recycling Factor (RRF) [Bifidobacterium animalis subsp.
           lactis BB-12]
          Length = 186

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 110/185 (59%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  V+D    K++M  ++   K++   +RTGR +P++L+ + VE YG+  PL  VA + V
Sbjct: 3   MANVVD--QSKEQMKKSVESTKENFAGIRTGRANPALLNGIVVEYYGAPTPLKHVATIGV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P   G  + + +PE TE+RR   VK+A +
Sbjct: 61  PEPRTLSVTPFDPSQANAVEKALRDSDLGASPRRNGSAILLTMPELTEDRRKEYVKLAKS 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G+  ED    L  ++ K+T +T   +D+  E K+
Sbjct: 121 KAEDGKVAVRNIRRKSKEAIDKAVKDGEMGEDEGDRLLKELDKVTKATTDELDALLEAKQ 180

Query: 181 KEIMH 185
           KEIM 
Sbjct: 181 KEIME 185


>gi|294631670|ref|ZP_06710230.1| ribosome recycling factor [Streptomyces sp. e14]
 gi|292835003|gb|EFF93352.1| ribosome recycling factor [Streptomyces sp. e14]
          Length = 185

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +K
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREYIKVAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 126 VSIRSVRRKAKDAIDKLVKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKESELLE 184


>gi|15834673|ref|NP_296432.1| ribosome recycling factor [Chlamydia muridarum Nigg]
 gi|270284838|ref|ZP_06194232.1| ribosome recycling factor [Chlamydia muridarum Nigg]
 gi|270288867|ref|ZP_06195169.1| ribosome recycling factor [Chlamydia muridarum Weiss]
 gi|301336218|ref|ZP_07224420.1| ribosome recycling factor [Chlamydia muridarum MopnTet14]
 gi|3122779|sp|P71148|RRF_CHLMU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|1518663|gb|AAB07072.1| ribosome-releasing factor [Chlamydia muridarum]
 gi|7190087|gb|AAF38937.1| ribosome recycling factor [Chlamydia muridarum Nigg]
          Length = 179

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K++   RTG+  P++++ V VE YG+ + L+ +A+++V + R L
Sbjct: 3   LTSAEKEMSGVLTFFQKEIRGFRTGKAHPALVETVTVEVYGTTMRLSDIASISVSDTRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGNVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +S+RNIRR   D LK   K    +ED V  LE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VSIRNIRRTCNDRLK---KDDSLTEDAVKGLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|134102473|ref|YP_001108134.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
 gi|291004136|ref|ZP_06562109.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
 gi|166231222|sp|A4FMD4|RRF_SACEN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|133915096|emb|CAM05209.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
          Length = 185

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 110/175 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   +   K ++ T+RTGR +P+M   + V+ YGS  PLNQ+A+++V E R++V+  
Sbjct: 10  EEKMQKAVEVAKDELATVRTGRANPAMFSGIVVDYYGSPTPLNQLASISVPEARLVVIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D   + ++E+ I +S+LG+NP  +GQ++R+ +P+ TEERR  +VK+A    E+ +I+VR
Sbjct: 70  YDASQLGAMEKAIRDSDLGVNPSNDGQLIRVSIPQMTEERRKEMVKLAKHKGEEGRITVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            IRR   + + +  K G+A ED     E +++ +T   +  ID   + K+ E++ 
Sbjct: 130 GIRRKVKEEIDRIVKDGEAGEDEGTRGEKELENLTHRYVAQIDELVKHKEAELLE 184


>gi|158338603|ref|YP_001519780.1| ribosome recycling factor [Acaryochloris marina MBIC11017]
 gi|158308844|gb|ABW30461.1| ribosome recycling factor [Acaryochloris marina MBIC11017]
          Length = 173

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 100/170 (58%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +I  +K+ + T+RTGR + S+LD + VE YG+  PL  +A ++  +   + +  +D 
Sbjct: 1   MQKSIEAMKRSLNTIRTGRANASLLDRITVEYYGTETPLRSLATISTPDASTITIQPFDP 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +ER I  S++GL P  +G  +R+ +P  TEERR   VK+A   AE+ K+++RNIR
Sbjct: 61  SSLTDIERSISLSDVGLVPNNDGSAIRLNIPPLTEERRKDFVKMAGKIAEEGKVAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RD +D  +K  KSG  SED    L++ IQ +TD     +D    EK+ EI
Sbjct: 121 RDAIDTARKQGKSGDISEDESKDLQDKIQGLTDKYTGQVDKILAEKETEI 170


>gi|227497536|ref|ZP_03927764.1| ribosome recycling factor [Actinomyces urogenitalis DSM 15434]
 gi|226832990|gb|EEH65373.1| ribosome recycling factor [Actinomyces urogenitalis DSM 15434]
          Length = 185

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 108/175 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   +   K+++  +RTGR +PSM + + V+ YG+  PL Q+A++T+ E R ++VS 
Sbjct: 10  EEKMEAALDAAKRELAAIRTGRANPSMFNSIVVDYYGAPTPLQQLASITIPEARTVIVSP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D+  +  +   I ES+LG+NP  +G V+R+ +P  TEERR   VK+A + AE+S+I VR
Sbjct: 70  FDRGAMKEITSAIRESDLGVNPTDDGTVIRVTLPALTEERRKDYVKLARSRAEESRIQVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            IR      L+  +K G+A ED V   E D+  +T   +++ID+    K+ E++ 
Sbjct: 130 GIRGKSKKELEAIKKDGEAGEDDVKRAEGDLDALTKRFVESIDAALTAKEAELLE 184


>gi|160871855|ref|ZP_02061987.1| ribosome recycling factor [Rickettsiella grylli]
 gi|159120654|gb|EDP45992.1| ribosome recycling factor [Rickettsiella grylli]
          Length = 186

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 107/174 (61%), Gaps = 1/174 (0%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGS-HVPLNQVANVTVLEPRMLVVSVWD 72
           M   +  LK ++  LRTGR  PS+L+ ++V  YG   VPLN VA++TV + R L+V+ W+
Sbjct: 13  MQKALEALKANLAKLRTGRAHPSLLEQLRVPQYGGKEVPLNHVASITVADARTLLVTPWE 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  +E+ I +S+LGLNP+  G V+R+P+   TEERR  + K+    AE +++S+RN 
Sbjct: 73  KSLIPLIEKTILQSHLGLNPLTAGNVIRVPLALLTEERRRDMSKLVKKEAEDARVSIRNY 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           R+D    LK   K    +ED     +  IQK+TD +I  ++   + K++E+MH 
Sbjct: 133 RQDANHQLKNLVKKKLITEDEERRAKEMIQKMTDRSIVEVEKIAKVKEEELMHI 186


>gi|329936702|ref|ZP_08286409.1| ribosome recycling factor [Streptomyces griseoaurantiacus M045]
 gi|329303932|gb|EGG47815.1| ribosome recycling factor [Streptomyces griseoaurantiacus M045]
          Length = 185

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +K
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREYIKVAKTKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 126 ISIRSVRRKAKDAIDKLIKDGEIGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|307747174|gb|ADN90444.1| Ribosome-recycling factor [Campylobacter jejuni subsp. jejuni M1]
          Length = 187

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 4   LNEIFNKQ--KTQSEKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 61

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 62  SDASTINITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 121

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 122 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKSKE 181

Query: 181 KEIM 184
            E++
Sbjct: 182 SELL 185


>gi|87302617|ref|ZP_01085434.1| ribosome releasing factor [Synechococcus sp. WH 5701]
 gi|87282961|gb|EAQ74918.1| ribosome releasing factor [Synechococcus sp. WH 5701]
          Length = 179

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 105/171 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   ++   T+RTGR +PS+LD + +E YG+  PL  VA+++  + + + +  +D 
Sbjct: 7   MRKSLEATQRTFNTIRTGRANPSLLDKITIEYYGAETPLRSVASLSTPDSQTIQIQPFDS 66

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +AS+E+ I  S+LGL P  +G+++RI +P  T +RR    K+A  YAE  K+++RNIR
Sbjct: 67  AAMASIEKAIAMSDLGLTPNNDGRLIRINIPPLTADRRKEFCKLASRYAEDGKVALRNIR 126

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD ++ +KK  K G+ SED     +  +QK+TD  I  ++    EK+ +I+
Sbjct: 127 RDAIEKIKKQEKDGELSEDQSRDEQEKVQKLTDRFIVELEKSLAEKEADIL 177


>gi|166154019|ref|YP_001654137.1| ribosome recycling factor [Chlamydia trachomatis 434/Bu]
 gi|166154894|ref|YP_001653149.1| ribosome recycling factor [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335219|ref|ZP_07223463.1| ribosome recycling factor [Chlamydia trachomatis L2tet1]
 gi|238687396|sp|B0B8Q3|RRF_CHLT2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238687412|sp|B0BAD2|RRF_CHLTB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|165930007|emb|CAP03490.1| ribosome recycling factor [Chlamydia trachomatis 434/Bu]
 gi|165930882|emb|CAP06444.1| ribosome recycling factor [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 179

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    RTG+  P++++ V VE YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMAGVLTFFQKETRGFRTGKAHPALVETVTVEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDNLTEDAVKSLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|296268981|ref|YP_003651613.1| ribosome recycling factor [Thermobispora bispora DSM 43833]
 gi|296091768|gb|ADG87720.1| ribosome recycling factor [Thermobispora bispora DSM 43833]
          Length = 185

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 108/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +S  K+D  T+R GR++P++ + + V+ YGS  PL Q+A+  V E R++
Sbjct: 6   LLEAEEKMDKAVSVAKEDFATIRAGRITPAIFNKINVDYYGSPTPLQQLASFHVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  + ++E+ I +S+LG+NP  +G V+R+  PE +EERR   +K+A   AE ++
Sbjct: 66  IIQPFDKSALNAIEKAIRDSDLGVNPSNDGNVIRVVFPELSEERRKEYIKMARNKAESAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRNIRR   + L K  K G+  ED V     ++  +T   +  ID   + K+ E++
Sbjct: 126 VSVRNIRRHAKEALDKLVKEGQVGEDEVHRAVKELDDLTHKHVAKIDDMLKHKEAELL 183


>gi|222097269|ref|YP_002531326.1| ribosome recycling factor [Bacillus cereus Q1]
 gi|221241327|gb|ACM14037.1| ribosome recycling factor [Bacillus cereus Q1]
          Length = 134

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/132 (48%), Positives = 89/132 (67%)

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLA 113
           Q+AN+TV E R+LV+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  
Sbjct: 2   QLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRD 61

Query: 114 LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           LVKV   YAE++K++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D
Sbjct: 62  LVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVD 121

Query: 174 SFFEEKKKEIMH 185
              + K+KEIM 
Sbjct: 122 EIAKNKEKEIME 133


>gi|160915170|ref|ZP_02077383.1| hypothetical protein EUBDOL_01178 [Eubacterium dolichum DSM 3991]
 gi|158432969|gb|EDP11258.1| hypothetical protein EUBDOL_01178 [Eubacterium dolichum DSM 3991]
          Length = 180

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 111/178 (62%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +M   +  L++++ T+RTG  + ++L+ V  E YGS +P+NQ+A + V+E R L
Sbjct: 4   MQTAEHKMQSAVEVLEQELKTIRTGMANAAILEHVTFEYYGSPMPINQMAGIKVVEGRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +ER I  S++GL P  +G  +R+ VP  TEERR   VK A    E +K
Sbjct: 64  MITPYDKGTLKDIERAIAMSDIGLVPQNDGDCIRLNVPALTEERRKEFVKDASKMGENAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RN+RRD  D +KK +   + +ED    L++ IQK+TD  +K ++   + K KEI+
Sbjct: 124 IAIRNVRRDANDTIKKDK---ELTEDESKDLQDKIQKLTDKFVKLVEQAVDAKSKEIL 178


>gi|254392087|ref|ZP_05007276.1| ribosome recycling factor [Streptomyces clavuligerus ATCC 27064]
 gi|326443741|ref|ZP_08218475.1| ribosome recycling factor [Streptomyces clavuligerus ATCC 27064]
 gi|197705763|gb|EDY51575.1| ribosome recycling factor [Streptomyces clavuligerus ATCC 27064]
          Length = 185

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA   AE SK
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRRDYIKVAKGKAEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+R++RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 126 ISIRSVRRKAKEAIDKLVKDGEVGEDEGRRGEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|78212260|ref|YP_381039.1| ribosome recycling factor [Synechococcus sp. CC9605]
 gi|123578616|sp|Q3ALP8|RRF_SYNSC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78196719|gb|ABB34484.1| ribosome recycling factor [Synechococcus sp. CC9605]
          Length = 182

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 106/177 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   QDLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD +D +KK  K G+ SED     ++ +QK  D  I  ++     K+ +I+
Sbjct: 124 ALRNLRRDAIDKIKKQEKEGEFSEDQSRDEQDGVQKTLDKFIAELEKHLASKEADIL 180


>gi|255507284|ref|ZP_05382923.1| ribosome recycling factor [Chlamydia trachomatis D(s)2923]
 gi|289525721|emb|CBJ15202.1| ribosome recycling factor [Chlamydia trachomatis Sweden2]
 gi|296435291|gb|ADH17469.1| ribosome recycling factor [Chlamydia trachomatis E/150]
 gi|296439009|gb|ADH21162.1| ribosome recycling factor [Chlamydia trachomatis E/11023]
          Length = 179

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    RTG+  P++++ V VE YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMSGVLTFFQKETRGFRTGKAHPALVETVTVEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDSLTEDAVKSLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|121612237|ref|YP_999947.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167004904|ref|ZP_02270662.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166230776|sp|A1VXV6|RRF_CAMJJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|87250479|gb|EAQ73437.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 185

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQ--KTQSEKSLEALKKDFTTLRTGKVNIHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKSKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 SELL 183


>gi|255349066|ref|ZP_05381073.1| ribosome recycling factor [Chlamydia trachomatis 70]
 gi|255503604|ref|ZP_05381994.1| ribosome recycling factor [Chlamydia trachomatis 70s]
          Length = 179

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    RTG+  P++++ V VE YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMSGVLTFFQKETRGFRTGKAHPALVETVTVEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDNLTEDAVKSLEKKIQELTDKFCKQIEELTKQKEAEL 176


>gi|161567479|ref|YP_321148.2| ribosome recycling factor [Anabaena variabilis ATCC 29413]
          Length = 187

 Score =  127 bits (319), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 108/180 (60%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++ L   + +M  T+   ++   T+RTGR + S+LD V V+ YGS  PL  +AN++  + 
Sbjct: 5   LVKLAEAESKMQHTVEATQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDA 64

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
             + +  +DK  +  +E+ I  S++GL P  +G  +R+ +P  T +RR  LVK+A  YAE
Sbjct: 65  TTIQIQPYDKTSLNIIEKAISLSDVGLTPSNDGSAIRLNIPPLTSDRRKELVKLAAKYAE 124

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           + ++++RNIRRD +D ++K  K+ + SED     ++ +QK+T+     ID    EK+K+I
Sbjct: 125 EGRVAIRNIRRDAIDSIRKQEKNAEVSEDEAKDQQDKLQKLTNKYTARIDELLAEKEKDI 184


>gi|291454429|ref|ZP_06593819.1| ribosome recycling factor [Streptomyces albus J1074]
 gi|291357378|gb|EFE84280.1| ribosome recycling factor [Streptomyces albus J1074]
          Length = 185

 Score =  127 bits (319), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +D   + ++E+ I +S+LG+NP  +G+++R+  PE TEERR   +KVA   AE SK
Sbjct: 66  VVTPFDSSALRNIEQAIRDSDLGVNPSNDGRIIRVSFPELTEERRREFIKVAKGKAEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+R +RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 126 ISIRAVRRKAKETIDKLVKDGEVGEDEGRRGEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|86149668|ref|ZP_01067898.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597400|ref|ZP_01100635.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|22001955|sp|Q9PIR0|RRF_CAMJE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|85839936|gb|EAQ57195.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190461|gb|EAQ94435.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|284925510|gb|ADC27862.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315930894|gb|EFV09879.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 305]
          Length = 185

 Score =  127 bits (319), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQ--KTQSEKSLEALKKDFTTLRTGKVNIHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDEGVKSKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 SELL 183


>gi|218561898|ref|YP_002343677.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|112359604|emb|CAL34389.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315928162|gb|EFV07480.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 187

 Score =  127 bits (319), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 4   LNEIFNKQ--KTQSEKSLEALKKDFTTLRTGKVNIHILDHITVDYYGTQTPLNQVATVLA 61

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 62  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 121

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 122 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDEGVKSKE 181

Query: 181 KEIM 184
            E++
Sbjct: 182 SELL 185


>gi|239982586|ref|ZP_04705110.1| ribosome recycling factor [Streptomyces albus J1074]
          Length = 186

 Score =  127 bits (319), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 7   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +D   + ++E+ I +S+LG+NP  +G+++R+  PE TEERR   +KVA   AE SK
Sbjct: 67  VVTPFDSSALRNIEQAIRDSDLGVNPSNDGRIIRVSFPELTEERRREFIKVAKGKAEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+R +RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 127 ISIRAVRRKAKETIDKLVKDGEVGEDEGRRGEKELDDTTAKYVAQVDELLKHKEAELLE 185


>gi|318056584|ref|ZP_07975307.1| ribosome recycling factor [Streptomyces sp. SA3_actG]
 gi|318075679|ref|ZP_07983011.1| ribosome recycling factor [Streptomyces sp. SA3_actF]
 gi|333024152|ref|ZP_08452216.1| putative ribosome recycling factor [Streptomyces sp. Tu6071]
 gi|332744004|gb|EGJ74445.1| putative ribosome recycling factor [Streptomyces sp. Tu6071]
          Length = 186

 Score =  127 bits (319), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 102/173 (58%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D+  +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 13  KMEKAVVVAKEDLAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +++S+R +
Sbjct: 73  KSALRNIEQAIRDSDLGVNPSNDGHIIRVVFPELTEERRKEFIKVARTKGEDARVSIRAV 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   D L K  K  +  ED V   E ++   T   +  +D   + K+ E++ 
Sbjct: 133 RRKAKDALDKLVKDKETGEDEVRRAEKELDDTTAKYVAQVDELLKHKESELLE 185


>gi|33866285|ref|NP_897844.1| ribosome recycling factor [Synechococcus sp. WH 8102]
 gi|39932068|sp|Q7U5F4|RRF_SYNPX RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33639260|emb|CAE08268.1| ribosome recycling factor protein Rrf [Synechococcus sp. WH 8102]
          Length = 182

 Score =  127 bits (319), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 106/177 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   QDLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD +D +KK  K G  SED     ++ +QK  D  I  ++    +K+ +I+
Sbjct: 124 ALRNLRRDAIDKVKKQEKDGDFSEDQSRDEQDAVQKTLDKFIAELEKHLADKEADIL 180


>gi|237805028|ref|YP_002889182.1| ribosome recycling factor [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273328|emb|CAX10243.1| ribosome recycling factor [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 179

 Score =  127 bits (319), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    +TG+  P+M++ V +E YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMAGVLTFFQKETRGFKTGKAHPAMVETVTIEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDSLTEDAVKSLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|227495072|ref|ZP_03925388.1| ribosome recycling factor [Actinomyces coleocanis DSM 15436]
 gi|226831524|gb|EEH63907.1| ribosome recycling factor [Actinomyces coleocanis DSM 15436]
          Length = 185

 Score =  127 bits (319), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 107/171 (62%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   ++  K++   +RTGR +P   + + V+ YG+  PL Q+A+V + E RM++VS +D+
Sbjct: 13  MEKALAATKREFGNIRTGRANPETFNSLLVDYYGAPTPLQQLASVQIPEARMVLVSPYDR 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++   I ES+LG+NP  +G V+R  +P  TEERR   VK+A + AE  ++S+RN+R
Sbjct: 73  SAMQAIITAIRESDLGVNPTDDGNVIRCTLPALTEERRKEYVKLAKSKAEDGRVSIRNVR 132

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R   + L + +K G+A ED V   E +++ +T + +  +D+  + K+K++M
Sbjct: 133 RKAKEELDRIKKDGEAGEDEVERAEKELETLTKNFVAKVDAELDAKEKDLM 183


>gi|116075317|ref|ZP_01472577.1| ribosome releasing factor [Synechococcus sp. RS9916]
 gi|116067514|gb|EAU73268.1| ribosome releasing factor [Synechococcus sp. RS9916]
          Length = 182

 Score =  127 bits (319), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 105/177 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+++  M  ++   ++   T+RTGR + S+LD + VE YG+  PL  +A +T  + + + 
Sbjct: 4   QDLEASMQKSVEATQRMFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLTTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDMGALASIEKAIAMSELGFTPNNDGKLIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD +D +KK  K G  SED     ++ +QK  D  I  ++    EK+ +I+
Sbjct: 124 ALRNIRRDAIDKIKKQEKDGDFSEDQSHDEQDSVQKTLDKYIGILEKHLAEKEADIL 180


>gi|294786947|ref|ZP_06752201.1| ribosome recycling factor [Parascardovia denticolens F0305]
 gi|315226584|ref|ZP_07868372.1| ribosome recycling factor [Parascardovia denticolens DSM 10105]
 gi|294485780|gb|EFG33414.1| ribosome recycling factor [Parascardovia denticolens F0305]
 gi|315120716|gb|EFT83848.1| ribosome recycling factor [Parascardovia denticolens DSM 10105]
          Length = 183

 Score =  127 bits (319), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 104/172 (60%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  TI   K++ + +RTGR +P++ + + V+ YG+   L  +A++ V + R L V+ +D
Sbjct: 10  QMDKTIETTKENFVGIRTGRANPALFNGLTVDYYGAPTSLKALASIGVADNRTLSVTPFD 69

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
                S+E+ I +S+LG+NP  +G V+ + +PE TEERR   VK+AH  AE+ K++VRNI
Sbjct: 70  VTQAGSIEKAIRDSDLGVNPRRDGNVIHVTLPELTEERRKDYVKLAHEIAERGKVAVRNI 129

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR   + + K+ K G   ED    L  D+ K T    + ID+  E K+KEI+
Sbjct: 130 RRKTKEGIDKATKDGDFGEDEGKRLLTDLDKATKKATEEIDTLLETKEKEIL 181


>gi|295836271|ref|ZP_06823204.1| ribosome recycling factor [Streptomyces sp. SPB74]
 gi|302522178|ref|ZP_07274520.1| ribosome recycling factor [Streptomyces sp. SPB78]
 gi|197697364|gb|EDY44297.1| ribosome recycling factor [Streptomyces sp. SPB74]
 gi|302431073|gb|EFL02889.1| ribosome recycling factor [Streptomyces sp. SPB78]
          Length = 185

 Score =  127 bits (319), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 102/173 (58%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D+  +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 12  KMEKAVVVAKEDLAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +++S+R +
Sbjct: 72  KSALRNIEQAIRDSDLGVNPSNDGHIIRVVFPELTEERRKEFIKVARTKGEDARVSIRAV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   D L K  K  +  ED V   E ++   T   +  +D   + K+ E++ 
Sbjct: 132 RRKAKDALDKLVKDKETGEDEVRRAEKELDDTTAKYVAQVDELLKHKESELLE 184


>gi|268680896|ref|YP_003305327.1| ribosome recycling factor [Sulfurospirillum deleyianum DSM 6946]
 gi|268618927|gb|ACZ13292.1| ribosome recycling factor [Sulfurospirillum deleyianum DSM 6946]
          Length = 186

 Score =  127 bits (318), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 111/174 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M   I+ LK+D  T+R+G+VS S+LD + V+ YG+   LNQVA +   +   + ++ 
Sbjct: 11  KEHMEKCIAALKRDFTTIRSGKVSISILDNIHVDYYGTPTALNQVATILATDATTITITP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K+M+  +E+ I ++N+G+NP  +G+ +++  P  T E+R    K A A  +K+KI++R
Sbjct: 71  WEKKMLREIEKAIMQANIGVNPNNDGESVKLFFPPMTTEQRKESAKQAKAMGDKAKIAIR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N+R+D  D +KK  K    +ED     ++++QKITD+T+  +D   +EK+ E++
Sbjct: 131 NVRKDANDQVKKLEKDKLITEDQSKKGQDEVQKITDATVTKVDDLVKEKEAEVL 184


>gi|302537209|ref|ZP_07289551.1| ribosome recycling factor [Streptomyces sp. C]
 gi|302446104|gb|EFL17920.1| ribosome recycling factor [Streptomyces sp. C]
          Length = 185

 Score =  127 bits (318), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 103/173 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+  V EPRM +V+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAITPINQLASFAVPEPRMAIVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              + ++E+ I +S+LG+NP  +G+++R+  PE T++RR   +KVA   AE S++S+R++
Sbjct: 72  ASALRNIEQAIRDSDLGVNPSNDGRIIRVTFPELTQDRRKEFIKVAKTKAEDSRVSIRSV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   D L K  K  +A ED V   E ++   T   +  +D   + K+ E++ 
Sbjct: 132 RRKAKDALDKLVKDKEAGEDEVRRAEKELDDTTAKYVAQVDELLKHKESELLE 184


>gi|18412657|ref|NP_567141.1| RRF (RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR) [Arabidopsis
           thaliana]
 gi|22001953|sp|Q9M1X0|RRFC_ARATH RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
 gi|13926252|gb|AAK49599.1|AF372883_1 AT3g63190/F16M2_40 [Arabidopsis thaliana]
 gi|15982709|gb|AAL09724.1| AT3g63190/F16M2_40 [Arabidopsis thaliana]
 gi|20260166|gb|AAM12981.1| putative protein [Arabidopsis thaliana]
 gi|27363350|gb|AAO11594.1| At3g63190/F16M2_40 [Arabidopsis thaliana]
 gi|332646925|gb|AEE80446.1| ribosome-recycling factor [Arabidopsis thaliana]
          Length = 275

 Score =  127 bits (318), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 109/177 (61%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K +M  TI  L+    ++RTGR + +MLD ++VE YGS V L  +A ++  +   L++
Sbjct: 98  DVKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLL 157

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +DK  + ++E+ I  S+LG+ P  +G V+R+ +P  T +RR  L KV    +E+ K++
Sbjct: 158 QPYDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVA 217

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD +    K  K  K SED V  L +D+QK+ D  +K I+  +++K+KE+M 
Sbjct: 218 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEKELMK 274


>gi|187735811|ref|YP_001877923.1| ribosome recycling factor [Akkermansia muciniphila ATCC BAA-835]
 gi|238691857|sp|B2UKL9|RRF_AKKM8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|187425863|gb|ACD05142.1| ribosome recycling factor [Akkermansia muciniphila ATCC BAA-835]
          Length = 188

 Score =  127 bits (318), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 108/180 (60%), Gaps = 2/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDL--VKVEAYGSHVPLNQVANVTVLEPR 64
           L   ++ M   + F K++   +RTG+ SP +++   V V +YGS + L  +A ++  EPR
Sbjct: 7   LLETEESMLKAVDFAKQEFSGVRTGKASPGLVENLDVHVSSYGSVMKLKGLAVISTPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ++++  +D   V  + R I+ES L LNP+VEG+ +R+P+P  TEERR  LVK+  + AE+
Sbjct: 67  LILIQPFDPSTVHDIGRAINESKLNLNPLVEGRSIRLPIPALTEERRKDLVKLVKSQAEE 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++ VR  R+  MD  KK +     +ED    LE  IQK+TD  +K ID     K+K+IM
Sbjct: 127 ARVRVRGARKAAMDSAKKLKAENIVTEDGQRDLETQIQKLTDKYVKEIDELVAVKEKDIM 186


>gi|254382047|ref|ZP_04997409.1| ribosome recycling factor [Streptomyces sp. Mg1]
 gi|194340954|gb|EDX21920.1| ribosome recycling factor [Streptomyces sp. Mg1]
          Length = 185

 Score =  127 bits (318), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 102/173 (58%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+  V EPRM +V+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAITPINQLASFAVPEPRMAIVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              + ++E+ I +S+LG+NP  +G+++R+  PE T++RR   +KVA   AE SK+S+R +
Sbjct: 72  ASALRNIEQAIRDSDLGVNPSNDGRIIRVTFPELTQDRRKEYIKVARTKAEDSKVSIRAV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   D L K  K  +A ED V   E ++   T   +  +D   + K+ E++ 
Sbjct: 132 RRKAKDALDKLVKDKEAGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|284037276|ref|YP_003387206.1| ribosome recycling factor [Spirosoma linguale DSM 74]
 gi|283816569|gb|ADB38407.1| ribosome recycling factor [Spirosoma linguale DSM 74]
          Length = 186

 Score =  127 bits (318), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 109/178 (61%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + KD M   +  L  ++  +R G+ +  MLD ++VE YG   PL+ VA++   + R +
Sbjct: 8   LDDAKDTMEKALKHLAIELTKIRAGKANAGMLDGIQVEYYGMLSPLHTVASINTPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +++++++ VE+ I  SNLGLNP  +G+ +R+ +P  TEERR  LVK      E +K
Sbjct: 68  VIKPFERKLISEVEKAIRNSNLGLNPNNDGEQIRLSIPPLTEERRRDLVKKVKQEVETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIR+D  D ++K  K G  SED V   E  +QK+TD+ I  ID  F  K+++IM
Sbjct: 128 VNVRNIRKDTNDDIRKLVKDG-VSEDAVKVGEERVQKLTDAFIARIDETFVAKERDIM 184


>gi|302554446|ref|ZP_07306788.1| ribosome recycling factor [Streptomyces viridochromogenes DSM
           40736]
 gi|302472064|gb|EFL35157.1| ribosome recycling factor [Streptomyces viridochromogenes DSM
           40736]
          Length = 185

 Score =  127 bits (318), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +K
Sbjct: 66  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREYIKVAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+R++RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 126 ISIRSVRRKAKEAIDKLIKDGEVGEDEGRRAEKELDDTTAKYVTQVDELLKHKEAELLE 184


>gi|29829166|ref|NP_823800.1| ribosome recycling factor [Streptomyces avermitilis MA-4680]
 gi|34924903|sp|Q82JY0|RRF_STRAW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29606272|dbj|BAC70335.1| putative ribosome recycling factor [Streptomyces avermitilis
           MA-4680]
          Length = 185

 Score =  127 bits (318), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +K
Sbjct: 66  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRKDYIKVAKTKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 126 VSIRSVRRKAKDAIDKLIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|126666177|ref|ZP_01737157.1| ribosome recycling factor [Marinobacter sp. ELB17]
 gi|126629499|gb|EBA00117.1| ribosome recycling factor [Marinobacter sp. ELB17]
          Length = 185

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 101/172 (58%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +I  L      +RTGR  PS+LD V V  YG   PL QVA+V V + R L VS W+
Sbjct: 12  KMTKSIEALASAFNKIRTGRAHPSILDSVMVNYYGQETPLRQVASVNVEDSRTLTVSPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K +V  +E+ I  S+LGLNP   G ++R+P+P  TEE R  +VK A A AE  ++SVRN 
Sbjct: 72  KNLVPQIEKAIMTSDLGLNPSTSGDLIRLPMPMLTEETRKNMVKQARADAEHGRVSVRNA 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD    LK+  K    SED     E ++QK+TD  I  ++   + K++++M
Sbjct: 132 RRDANSTLKELLKDKDISEDDERRGEEEVQKLTDRFIAEVEKLLKGKEEDLM 183


>gi|116072186|ref|ZP_01469453.1| ribosome releasing factor [Synechococcus sp. BL107]
 gi|116064708|gb|EAU70467.1| ribosome releasing factor [Synechococcus sp. BL107]
          Length = 182

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 106/177 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   KDLEASMHKSLEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S LG  P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISALASIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASRYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD +D +KK  K G  SED     ++ IQK+ D  I  ++    EK+  I+
Sbjct: 124 ALRNLRRDAIDKVKKQEKDGDFSEDQSRDEQDSIQKVLDKNIVALEKQLAEKEAAIL 180


>gi|254415746|ref|ZP_05029504.1| ribosome recycling factor [Microcoleus chthonoplastes PCC 7420]
 gi|196177452|gb|EDX72458.1| ribosome recycling factor [Microcoleus chthonoplastes PCC 7420]
          Length = 173

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 101/170 (59%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   ++   T+RTGR + S+LD V VE YGS  PL  +A++   +   + +  +DK
Sbjct: 1   MKKAVEATQRGFNTIRTGRANASLLDRVMVEYYGSPTPLKSLASINTPDATTITIQPYDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E+ I  S++GL P  +GQV+R+ +P  T ERR   VK+A   AE+ K+S+RNIR
Sbjct: 61  STLTLIEKSISLSDIGLTPNNDGQVVRLNIPPLTSERRQEFVKMAGKLAEEGKVSIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RD +D ++K  K+ + SED    L++ IQ++TD     ID     K+K+I
Sbjct: 121 RDAVDSVRKQEKNSEISEDESRDLQDQIQQLTDKYTAKIDDLLVAKEKDI 170


>gi|294815389|ref|ZP_06774032.1| Ribosome-recycling factor [Streptomyces clavuligerus ATCC 27064]
 gi|294327988|gb|EFG09631.1| Ribosome-recycling factor [Streptomyces clavuligerus ATCC 27064]
          Length = 173

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 102/172 (59%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +DK
Sbjct: 1   MEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA   AE SKIS+R++R
Sbjct: 61  TALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRRDYIKVAKGKAEDSKISIRSVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R   + + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 121 RKAKEAIDKLVKDGEVGEDEGRRGEKELDDTTAKYVAQVDELLKHKEAELLE 172


>gi|307330053|ref|ZP_07609204.1| ribosome recycling factor [Streptomyces violaceusniger Tu 4113]
 gi|306884314|gb|EFN15349.1| ribosome recycling factor [Streptomyces violaceusniger Tu 4113]
          Length = 185

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TE+RR   +KVA A  E +K
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEQRRKEFIKVAKAKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+R++RR   + + K  K G   ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 126 ISIRSVRRKAKESIDKLIKDGDVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|298489665|ref|YP_003719842.1| ribosome recycling factor ['Nostoc azollae' 0708]
 gi|298231583|gb|ADI62719.1| ribosome recycling factor ['Nostoc azollae' 0708]
          Length = 182

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 107/177 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + +M  T+   ++   T+RTGR + S+LD ++VE YGS  PL  +AN++  +   +
Sbjct: 3   LAEAESKMQKTVESTQQAFNTIRTGRANASLLDRIQVEYYGSPTPLKSLANISTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  +  +E+ I  S++G+ P  +G V+R+ +P  T +RR    K+A  YAE+ +
Sbjct: 63  LIQPYDRSSLNILEKAISLSDIGITPSNDGSVIRLNIPPLTSDRRKEFAKLAAKYAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           + +RNIRRD +D ++K  K+ + SED     ++ +QK+T+   + ID    EK+K+I
Sbjct: 123 VGIRNIRRDALDSIRKQEKAAEISEDESRDQQDKLQKLTNKYTEKIDHLLTEKEKDI 179


>gi|269955983|ref|YP_003325772.1| ribosome recycling factor [Xylanimonas cellulosilytica DSM 15894]
 gi|269304664|gb|ACZ30214.1| ribosome recycling factor [Xylanimonas cellulosilytica DSM 15894]
          Length = 185

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 105/175 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   I   K+D   +RTGR +  M   + V+ YG+  PL Q+A+  + E R +++S 
Sbjct: 10  EEKMDKAIEVAKEDFAGIRTGRANAGMFSKIVVDYYGAPTPLQQLASFNIPEARSVLISP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +A++E+ + +S+LG+NP  +G  +RI +P  TEERR   VK+A   AE ++I+VR
Sbjct: 70  FDKSSMAAIEKALRDSDLGVNPSNDGNAIRIVLPALTEERRRDYVKLAKTKAEDARITVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR   D L K  K G+A ED V+  E +++ +T   +  +D     K+ E++ 
Sbjct: 130 NIRRKAKDVLDKLVKDGEAGEDEVSRAEKELEALTKRHVDQVDQLLAGKESELLE 184


>gi|222824490|ref|YP_002576064.1| ribosome releasing factor [Campylobacter lari RM2100]
 gi|254809499|sp|B9KE24|RRF_CAMLR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|222539711|gb|ACM64812.1| ribosome releasing factor [Campylobacter lari RM2100]
          Length = 185

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 109/184 (59%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   Q  K +   ++  LKKD  T+RTG+V+ ++LD V V+ YGS  PLNQVA V  
Sbjct: 2   LNEIYTKQ--KQQSDKSLEALKKDFTTIRTGKVNINILDHVHVDYYGSQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++E  I  +N+G+NP  +G+ +++  P  T E+R    K A A
Sbjct: 60  TDASTISITPWEKPMLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENAKSAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+++RNIR+D  D +KK  K    SED      +++QK TD+    ID   + K+
Sbjct: 120 MGEKAKVAIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKQTDNYTTKIDELVKNKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 AELL 183


>gi|318041138|ref|ZP_07973094.1| ribosome recycling factor [Synechococcus sp. CB0101]
          Length = 179

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 105/172 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   ++   T+RTGR + S+LD ++VE YG+  PL  +A ++  +   + +  +D 
Sbjct: 7   MRKSVDSTQRTFNTIRTGRANASLLDKIQVEYYGADTPLKSLATISTPDSSTIQLQPFDA 66

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             ++ +E+ I  S+LGL    +G+V+RI +P  TE+RR  L K+A  YAE+ K+++RNIR
Sbjct: 67  SSLSLIEKAISMSDLGLTCNNDGKVIRINIPPLTEDRRKDLCKLAAKYAEEGKVALRNIR 126

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RD +D +KK  K G+ SED     ++ +QK+TD  I  I+    EK+ +I+ 
Sbjct: 127 RDAIDKVKKQEKEGEFSEDQSRDEQDKVQKLTDKFIAEIEKLLAEKEADILK 178


>gi|298373170|ref|ZP_06983160.1| ribosome recycling factor [Bacteroidetes oral taxon 274 str. F0058]
 gi|298276074|gb|EFI17625.1| ribosome recycling factor [Bacteroidetes oral taxon 274 str. F0058]
          Length = 188

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 106/171 (61%), Gaps = 1/171 (0%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+SFL   +  +R G+ +  +LD +KV+ YG+  PL+ VA +T  + + + +  W+K
Sbjct: 17  MEATVSFLDDALAHIRAGKANVKILDGIKVDYYGTLTPLSSVATITTPDAKTISIQPWEK 76

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +E+ I  S++G+ P   G+V+R+ +P  TEERR  LVK A +  E++KIS+RN R
Sbjct: 77  NLIPVIEKAILASDVGITPANNGEVVRLSIPPLTEERRKQLVKQAGSAVEEAKISIRNAR 136

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R+ ++ LKK  K+G   ED+    E ++QK  D  IK ++  F  K+KEIM
Sbjct: 137 REAIERLKKEIKNG-MPEDVEKDAEAEVQKQHDKHIKRLEELFAAKEKEIM 186


>gi|260435842|ref|ZP_05789812.1| ribosome recycling factor [Synechococcus sp. WH 8109]
 gi|260413716|gb|EEX07012.1| ribosome recycling factor [Synechococcus sp. WH 8109]
          Length = 182

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 106/177 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   QDLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD +D +KK  K G+ SED     ++ +QK  D  I  ++     K+ +++
Sbjct: 124 ALRNLRRDAIDKIKKQEKEGEFSEDQSRDEQDGVQKTLDKFIAELEQHLATKEADVL 180


>gi|325067054|ref|ZP_08125727.1| ribosome recycling factor [Actinomyces oris K20]
 gi|326771757|ref|ZP_08231042.1| ribosome recycling factor [Actinomyces viscosus C505]
 gi|326637890|gb|EGE38791.1| ribosome recycling factor [Actinomyces viscosus C505]
          Length = 185

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 107/175 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +D+M   +   K ++ T+RTGR +PSM + + V+ YG+  PL Q+A++T+ E R ++VS 
Sbjct: 10  EDKMDKALQAAKSELATIRTGRANPSMFNGIVVDYYGAPTPLQQLASLTIPEARTVLVSP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D+  +  +   I ES+LG+NP  +G V+R+ +P  TEERR   VK+A + AE S++ VR
Sbjct: 70  FDRSAMKDIVTAIRESDLGVNPTDDGTVIRVTLPALTEERRKDYVKLARSRAEDSRVQVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            IR      L+  +K G+A ED V   E+++  +T   ++ ID+    K+ E++ 
Sbjct: 130 GIRGKAKKELEAIKKDGEAGEDDVKRAEHELDGLTKRFVEQIDAALSAKEAELLE 184


>gi|238063326|ref|ZP_04608035.1| ribosome-recycling factor [Micromonospora sp. ATCC 39149]
 gi|237885137|gb|EEP73965.1| ribosome-recycling factor [Micromonospora sp. ATCC 39149]
          Length = 185

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K++   +RTGR + +M   V ++ YG+  PL Q+A++ V EPRM+
Sbjct: 6   LLEAEEKMERAIEHAKEEFGAIRTGRANAAMFSKVIIDYYGTPTPLPQMASIGVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   + ++ER I +S+L +NP  EG  LRI +P+ TEERR  ++KVA    E++K
Sbjct: 66  IIKPYDNSQINAMERAIRDSDLSVNPNNEGNQLRILLPQMTEERRREMIKVARHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRR G + L +  K G+  ED     E D+  +T   +  ID   + K+ E++ 
Sbjct: 126 VAVRNIRRKGKEELDRLVKDGEVGEDEGRRAEKDLDDLTQKFVATIDELVKHKESELLE 184


>gi|86153726|ref|ZP_01071929.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842687|gb|EAQ59899.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 185

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 111/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQ--KTQSEKSLEALKKDFTTLRTGKVNIHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDAYTIKIDESVKSKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 SELL 183


>gi|320532043|ref|ZP_08032932.1| ribosome recycling factor [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320135743|gb|EFW27802.1| ribosome recycling factor [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 185

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 107/175 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +D+M   +   K ++ T+RTGR +PSM + + V+ YG+  PL Q+A++T+ E R ++VS 
Sbjct: 10  EDKMDKALQAAKSELATIRTGRANPSMFNGIVVDYYGAPTPLQQLASLTIPEARTVLVSP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D+  +  +   I ES+LG+NP  +G V+R+ +P  TEERR   VK+A + AE S++ VR
Sbjct: 70  FDRSAMKDIVTAIRESDLGVNPTDDGTVIRVTLPALTEERRKDYVKLARSRAEDSRVQVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            IR      L+  +K G+A ED V   E+++  +T   ++ ID+    K+ E++ 
Sbjct: 130 GIRGKAKKELEAIKKDGEAGEDDVKRAEHELDGLTKRFVEQIDAALSAKESELLE 184


>gi|283955346|ref|ZP_06372845.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 414]
 gi|283793106|gb|EFC31876.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 414]
          Length = 185

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQ--KTQSEKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK   A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQVKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKTISEDEAKKAYDEVQKLTDAYTAKIDESVKSKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 SELL 183


>gi|296395044|ref|YP_003659928.1| ribosome recycling factor [Segniliparus rotundus DSM 44985]
 gi|296182191|gb|ADG99097.1| ribosome recycling factor [Segniliparus rotundus DSM 44985]
          Length = 185

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 105/175 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM   +   K D   +RTGR + S+   V V+ YG+  P+ Q+++V   +PR++V+  
Sbjct: 10  EERMELAVEVAKDDFAAIRTGRATASLFAKVVVDYYGTPTPIPQISSVQTPDPRLVVIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           ++   + ++E  I +S+LGLNP  +GQV+R+ +P  TEERR    K A   AE+++++VR
Sbjct: 70  YEAGQLRAIEEAIQKSDLGLNPSNDGQVVRVAIPALTEERRKEFAKQARGKAEEARVTVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+RR   + L K  K G+  ED VA  E ++ K+T   +  ID   ++K+ E++ 
Sbjct: 130 NVRRKANEQLGKLSKEGQTGEDDVARAEKELDKLTARFVGVIDELVKKKEAELLE 184


>gi|302542189|ref|ZP_07294531.1| ribosome recycling factor [Streptomyces hygroscopicus ATCC 53653]
 gi|302459807|gb|EFL22900.1| ribosome recycling factor [Streptomyces himastatinicus ATCC 53653]
          Length = 185

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 103/173 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM V++ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVITPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE TE+RR   +KVA    E +KIS+R+I
Sbjct: 72  KSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEQRRKEFIKVAKGKGEDAKISIRSI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   + + K  K G+  ED     E ++  +T   +  +D   + K+ E++ 
Sbjct: 132 RRKAKESIDKLIKDGEVGEDEGRRAEKELDDLTAKYVAQVDELLKHKEAELLE 184


>gi|186686172|ref|YP_001869368.1| ribosome recycling factor [Nostoc punctiforme PCC 73102]
 gi|238691203|sp|B2IVW4|RRF_NOSP7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|186468624|gb|ACC84425.1| ribosome recycling factor [Nostoc punctiforme PCC 73102]
          Length = 182

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 110/177 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  ++   ++   T+RTGR + S+LD V V+ YGS  PL  +AN++  +   +
Sbjct: 3   LADAKSKMQSSVESTQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +++  +  +E+ I  S++GL P  +G V+R+ +P  T +RR   VK+A  YAE+ +
Sbjct: 63  LIQPYERNTLNIIEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKMATKYAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD +D ++K  K+ + S+D     ++++QK+T+     ID+   EK+K+I
Sbjct: 123 VAIRNIRRDAIDSIRKQEKASEISKDESKDQQDNLQKLTNEYTSRIDALLAEKEKDI 179


>gi|282890409|ref|ZP_06298937.1| ribosome recycling factor [Parachlamydia acanthamoebae str. Hall's
           coccus]
 gi|281499791|gb|EFB42082.1| ribosome recycling factor [Parachlamydia acanthamoebae str. Hall's
           coccus]
          Length = 183

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 104/177 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M   +  LK D+ ++RTG+ +P MLD + VE YGS + L  +A +   E R L
Sbjct: 4   VKQTKEKMEAALEHLKNDLNSIRTGQANPGMLDGITVEVYGSQMRLRDIATINSPEARQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D     ++ + I  +NLG  PIV+G  +RI +P   E  R  + K+ H   E++K
Sbjct: 64  LITPFDAGTAGAIGKSIERANLGFMPIVDGNAVRIKIPPMDESLRKEMAKLCHKKQEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RN RRD  D ++K + +G+  ED +   E +IQ++TD   K  D    +K+KEI
Sbjct: 124 VAIRNHRRDANDLVRKQKAAGELPEDQMKKQEKEIQELTDKYCKLADEIAAKKEKEI 180


>gi|212551111|ref|YP_002309428.1| ribosome recycling factor [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549349|dbj|BAG84017.1| ribosome recycling factor [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 184

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 107/172 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  T++ L++ +  +R G+ S  +LD +K+E YG+ VPL+ VAN+++L+ + + +  W+
Sbjct: 11  KMLHTLTHLEEVLSRIRAGKASTHILDGIKIEYYGNVVPLSNVANISILDAKTITILAWE 70

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M+  +E+ I +S++G+ P   G+++R+ +P  TEERR  LVK +    EK+K+ +RNI
Sbjct: 71  KAMMKPIEKAIQDSDIGITPENNGELVRLNIPPLTEERRKQLVKQSKGEVEKAKVGIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+  D +KK  K G  SED     E   QK+ D  +K ID     K K+IM
Sbjct: 131 RRETNDMIKKFVKEGIFSEDEGKKTELATQKLHDKFLKKIDKVLIAKVKDIM 182


>gi|329947861|ref|ZP_08294793.1| ribosome recycling factor [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328523485|gb|EGF50583.1| ribosome recycling factor [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 185

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 107/175 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +D+M   +   K ++ T+RTGR +PSM + + V+ YG+  PL Q+A++T+ E R ++VS 
Sbjct: 10  EDKMDKALQAAKSELATIRTGRANPSMFNGIVVDYYGAPTPLQQLASLTIPEARTVLVSP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D+  +  +   I ES+LG+NP  +G V+R+ +P  TEERR   VK+A + AE S++ VR
Sbjct: 70  FDRSAMKDIVTAIRESDLGVNPTDDGTVIRVTLPALTEERRKDYVKLARSRAEDSRVQVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            IR      L+  +K G+A ED V   E+++  +T   ++ +D+    K+ E++ 
Sbjct: 130 GIRAKAKKELEAIKKDGEAGEDDVKRAEHELDGLTKRFVEQVDAALSAKESELLE 184


>gi|75700577|gb|ABA20253.1| ribosome recycling factor [Anabaena variabilis ATCC 29413]
          Length = 173

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 103/170 (60%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+   ++   T+RTGR + S+LD V V+ YGS  PL  +AN++  +   + +  +DK
Sbjct: 1   MQHTVEATQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDATTIQIQPYDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E+ I  S++GL P  +G  +R+ +P  T +RR  LVK+A  YAE+ ++++RNIR
Sbjct: 61  TSLNIIEKAISLSDVGLTPSNDGSAIRLNIPPLTSDRRKELVKLAAKYAEEGRVAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RD +D ++K  K+ + SED     ++ +QK+T+     ID    EK+K+I
Sbjct: 121 RDAIDSIRKQEKNAEVSEDEAKDQQDKLQKLTNKYTARIDELLAEKEKDI 170


>gi|184201268|ref|YP_001855475.1| ribosome recycling factor [Kocuria rhizophila DC2201]
 gi|238689218|sp|B2GKT3|RRF_KOCRD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|183581498|dbj|BAG29969.1| ribosome recycling factor [Kocuria rhizophila DC2201]
          Length = 185

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 101/178 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +   RMG  +   K D  T+RTGR +P++   + V  YG+  PL Q+A+    E R L
Sbjct: 6   LSDATTRMGKAVDAAKTDFSTVRTGRANPALFSSLLVAYYGTPTPLQQLASFQTPEARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E+ + +S++G NP  +G V+R+ +PE TEERR   VK+ H  AE ++
Sbjct: 66  LITPYDRSALNDIEKALRDSDIGANPANDGNVIRVVMPELTEERRKEYVKIVHGKAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN+RR   + ++K  K G   ED     E D+   T   I  +D   + K+ E++
Sbjct: 126 VSVRNVRRHAKEAIEKLVKDGDVGEDDGKRGEKDLDAATKKHIDQVDELLKNKEAELL 183


>gi|159903064|ref|YP_001550408.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9211]
 gi|226749934|sp|A9BEE4|RRF_PROM4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|159888240|gb|ABX08454.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9211]
          Length = 182

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 106/171 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + +  +D 
Sbjct: 10  MRKSVEAAQRNFNTIRTGRANTSLLDRLTVEYYGADTPLKSLATISTPDSQTISIQPFDL 69

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E+ I  S+LG  P  +G+++RI +P  TEERR    K+A  YAE+ K+++RNIR
Sbjct: 70  SSLVLIEKSIAMSDLGFTPNNDGKIIRINIPPLTEERRKEFCKLASKYAEEGKVALRNIR 129

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD ++ +KKS K  + SED     ++++QK+TD  I  I+    +K++EI+
Sbjct: 130 RDAIERIKKSEKESEISEDQSRDEQDNVQKLTDRFITEIEKNLSDKEQEIL 180


>gi|320527474|ref|ZP_08028655.1| ribosome recycling factor [Solobacterium moorei F0204]
 gi|320132187|gb|EFW24736.1| ribosome recycling factor [Solobacterium moorei F0204]
          Length = 182

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 101/172 (58%), Gaps = 3/172 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   I  L+ ++ T+RTG  +  MLD V+V+ YGS  PLNQ+A ++V E R LV+  +D
Sbjct: 12  KMDKVIDHLQSELNTVRTGAANVKMLDRVEVDYYGSPTPLNQIAALSVSEGRTLVIKPYD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              + ++E   +E++LG+ P  +G V+R+ VP+ T E R  + K      E+ KI +RNI
Sbjct: 72  PSSLKAIEHACNEADLGIAPSNDGTVIRLTVPQLTGETRKEMTKKVDKMGEECKIQIRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD M  +KK +      ED+    EN+IQK+TD  IK ID     K  E++
Sbjct: 132 RRDAMSVVKKDK---TMDEDIQKDCENEIQKLTDKYIKKIDDLAAAKSAEVL 180


>gi|330959202|gb|EGH59462.1| ribosome recycling factor [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 185

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 102/172 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L V  ++
Sbjct: 12  RMQKSLESLAHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQVVAFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE ++++VRNI
Sbjct: 72  RNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARVAVRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  LK   K  + SED      +D+QK+TD  +  I++  ++K+ ++M
Sbjct: 132 RRDALSQLKDLVKDKEISEDEERRAADDVQKLTDKFVAEIEAAVKQKEADLM 183


>gi|149374434|ref|ZP_01892208.1| ribosome recycling factor [Marinobacter algicola DG893]
 gi|149361137|gb|EDM49587.1| ribosome recycling factor [Marinobacter algicola DG893]
          Length = 194

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/190 (42%), Positives = 109/190 (57%), Gaps = 7/190 (3%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTL-------RTGRVSPSMLDLVKVEAYGSHVPLNQ 54
           N+  D   I D   D    +KK + +L       RTGR  PS+LD V V+ YG   PL Q
Sbjct: 3   NESEDAAVIDDIKADAEKKMKKSLESLSWAFNKIRTGRAHPSILDSVTVDYYGQETPLKQ 62

Query: 55  VANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLAL 114
           VA+V V + R L VS W+K ++  +E+ I  S+LGLNP   G+V+RIP+P  TEE R  +
Sbjct: 63  VASVNVEDNRTLAVSPWEKPLLPKIEKAIMMSDLGLNPSNNGEVIRIPMPMLTEETRKEM 122

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           VK A A AE  K+SVRN RRD    LK+  K    +ED     E +IQK+TD  I  I+ 
Sbjct: 123 VKQARADAEHGKVSVRNARRDANSTLKELLKEKDINEDEERYGEEEIQKLTDRYIAEIEK 182

Query: 175 FFEEKKKEIM 184
             + K++++M
Sbjct: 183 QLKAKEEDLM 192


>gi|153952376|ref|YP_001397463.1| ribosome recycling factor [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166230775|sp|A7H1T3|RRF_CAMJD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|152939822|gb|ABS44563.1| ribosome recycling factor [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 185

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+++  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQ--KTQSEKSLEALKKDFTTLRTGKINTHILDHITVDYYGNQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD     ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDVYTTKIDESVKSKE 179

Query: 181 KEIM 184
            E++
Sbjct: 180 SELL 183


>gi|326490946|dbj|BAJ90140.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326512904|dbj|BAK03359.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 266

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 107/176 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  K++M   I  ++ +  T+RTGR +PSMLD ++VE YG+ V L  +A V   +   L+
Sbjct: 88  EQAKEKMEKAIETVQSNFNTVRTGRANPSMLDRIEVEYYGTPVNLKTIAQVNTPDATSLL 147

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK  +  +E+ I  +N+G+ P  +G+V+R+ VP  T +RR  + K     +E+ K+
Sbjct: 148 IQPYDKSCLKLIEKAIVAANIGVTPSNDGEVIRVTVPPLTSDRRKEMTKTVAKLSEEGKV 207

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++RNIRRD +    K  K  K SED V  L  D+QKITD  +K +++  ++K++E+
Sbjct: 208 AIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKITDEYMKKVEAIQKQKEQEL 263


>gi|239917205|ref|YP_002956763.1| ribosome recycling factor [Micrococcus luteus NCTC 2665]
 gi|281414322|ref|ZP_06246064.1| ribosome recycling factor [Micrococcus luteus NCTC 2665]
 gi|259494549|sp|C5C9Q7|RRF_MICLC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|239838412|gb|ACS30209.1| ribosome recycling factor [Micrococcus luteus NCTC 2665]
          Length = 185

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 111/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ +++M  TI   ++D +++RTGR +P +   V V+ YGS  PL Q+A+ T  + R L
Sbjct: 6   LQSAEEQMDRTIEATREDFVSVRTGRANPGLYSKVMVDYYGSFTPLQQLASFTTTDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  + ++E+ + ES +G NP  +G+V+RI +PE T ERR   VK+  + AE+ K
Sbjct: 66  LITPFDQSALRNIEKALSESEVGANPSNDGKVIRIVMPELTAERRKEYVKLVKSKAEEHK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ISVRN RR   + + K+ K G+  ED  A  E ++  +T   ++ ID   + K++E++ 
Sbjct: 126 ISVRNARRKAKEAMDKAVKDGEVGEDEGARGEKELDALTKRHVELIDEMAKNKEQELLE 184


>gi|160902092|ref|YP_001567673.1| ribosome recycling factor [Petrotoga mobilis SJ95]
 gi|190360246|sp|A9BJD6|RRF_PETMO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|160359736|gb|ABX31350.1| ribosome recycling factor [Petrotoga mobilis SJ95]
          Length = 187

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 104/174 (59%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  T+   + ++  +RTGR + ++ + +KV+ YG   P+NQVA ++V E R +V++ W
Sbjct: 13  EKMKKTLEHFEDELKKVRTGRPTTAIFEDIKVDYYGMPTPINQVATLSVGEERTVVITPW 72

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK+M+  +E+ I+ SN G + I +G V+R+  P  T E R  LVK      E++K+++RN
Sbjct: 73  DKKMLEPIEKAINSSNFGFHAINDGNVVRVSFPNPTIEERRKLVKAIKEMLEETKVALRN 132

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IRRD +  +K+ +  G  SED     E +IQ+I        +  F+ K+KEIM 
Sbjct: 133 IRRDDIKKVKEIKNEGSISEDEAKKFEEEIQEILKENEDEAEKIFQRKEKEIME 186


>gi|86742260|ref|YP_482660.1| ribosome recycling factor [Frankia sp. CcI3]
 gi|123723539|sp|Q2J711|RRF_FRASC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|86569122|gb|ABD12931.1| ribosome recycling factor [Frankia sp. CcI3]
          Length = 185

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 109/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +S  ++D   +RTGR++P++   + V+ YG+  P+ Q+A+  + EPRM+
Sbjct: 6   LLEAEEKMEKAVSVAREDFANIRTGRITPAVFSKILVDYYGAPTPVQQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + ++E+ + +S+LG+NP  +G ++R   PE +E+RR  LVKVA   AE+++
Sbjct: 66  IITPYDKSSLGAIEKAVRDSDLGVNPSNDGTIIRCVFPELSEQRRRDLVKVARTKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN+RR   D + +  + G A ED     E D+ + T   +  +D     K+ +++
Sbjct: 126 VSIRNVRRHAKDTIDRIVRDGDAGEDEGRRGEKDLDEATHRYVGQVDELLRLKESDLL 183


>gi|76789417|ref|YP_328503.1| ribosome recycling factor [Chlamydia trachomatis A/HAR-13]
 gi|237803107|ref|YP_002888301.1| ribosome recycling factor [Chlamydia trachomatis B/Jali20/OT]
 gi|123606674|sp|Q3KL17|RRF_CHLTA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|76167947|gb|AAX50955.1| ribosome recycling factor (RRF) [Chlamydia trachomatis A/HAR-13]
 gi|231274341|emb|CAX11136.1| ribosome recycling factor [Chlamydia trachomatis B/Jali20/OT]
          Length = 179

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    +TG+  P++++ V +E YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMAGVLTFFQKETRGFKTGKAHPALVETVTIEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDSLTEDAVKSLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|309389219|gb|ADO77099.1| ribosome recycling factor [Halanaerobium praevalens DSM 2228]
          Length = 185

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 107/174 (61%), Gaps = 2/174 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D+ T+RTGR  PS++  +K   YG   P+ Q+A V   E R +V+  WD
Sbjct: 12  KMEKGLEKTKEDLNTIRTGRARPSLVQNIKANNYGVATPIQQMAKVFAPEARQIVIEPWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I + NLGL P  +G V+RI +P+ TEERR  LVK+ H  AEK +I++R I
Sbjct: 72  KNNIETIEKAIMQENLGLTPSNDGSVIRINIPQLTEERRKELVKILHEKAEKGRIAIRAI 131

Query: 133 RRDGMDHLKKSRKSGKASED-MVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR+  + L+     G+ SED M   LEN +Q++TD  I  +D   ++K++EIM 
Sbjct: 132 RREANEELELLEDEGEISEDNMHRGLEN-VQELTDEYIDKLDQIVKKKEEEIME 184


>gi|119513540|ref|ZP_01632559.1| ribosome releasing factor [Nodularia spumigena CCY9414]
 gi|119461805|gb|EAW42823.1| ribosome releasing factor [Nodularia spumigena CCY9414]
          Length = 182

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 103/170 (60%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+   ++   T+RTGR + S+LD V V+ YGS  PL  +AN++  +   +++  +DK
Sbjct: 10  MQKTVEATQRAFNTIRTGRANASLLDKVSVDYYGSPTPLKSLANISTPDASTILIQPYDK 69

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  VE+ I  S++GL P  +G V+R+ +P  T +RR   VK+A  YAE+ ++++RNIR
Sbjct: 70  GSLNVVEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKMASKYAEEGRVAIRNIR 129

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RD  D ++K  K+ + SED     ++ +QK+T+     ID    EK+K+I
Sbjct: 130 RDVQDTIRKEEKASEISEDESKDQQDQLQKLTNKYTARIDDLLAEKEKDI 179


>gi|153820605|ref|ZP_01973272.1| ribosome recycling factor [Vibrio cholerae NCTC 8457]
 gi|126508852|gb|EAZ71446.1| ribosome recycling factor [Vibrio cholerae NCTC 8457]
          Length = 148

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 89/134 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRELTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLK 141
           +VRNIRRD  + LK
Sbjct: 127 AVRNIRRDANNDLK 140


>gi|289706653|ref|ZP_06503001.1| ribosome recycling factor [Micrococcus luteus SK58]
 gi|289556573|gb|EFD49916.1| ribosome recycling factor [Micrococcus luteus SK58]
          Length = 185

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 110/179 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ +++M  TI   ++D  ++RTGR +P +   V V+ YGS  PL Q+A+ T  + R L
Sbjct: 6   LQSAEEQMDRTIEATREDFASVRTGRANPGLYSKVMVDYYGSFTPLQQLASFTTTDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  + ++E+ + ES +G NP  +G+V+RI +PE T ERR   VK+  + AE+ K
Sbjct: 66  LITPFDQSALRNIEKALSESEVGANPSNDGKVIRIVMPELTAERRKEYVKLVKSKAEEHK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ISVRN RR   + + K+ K G+  ED  A  E ++  +T   ++ ID   + K++E++ 
Sbjct: 126 ISVRNARRKAKEAMDKAVKDGEVGEDEGARGEKELDALTKRHVELIDEMAKNKEQELLE 184


>gi|300778312|ref|ZP_07088170.1| ribosome recycling factor [Chryseobacterium gleum ATCC 35910]
 gi|300503822|gb|EFK34962.1| ribosome recycling factor [Chryseobacterium gleum ATCC 35910]
          Length = 184

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+++K  M   +  L      +R GR S +M+  V VE YG+  P+NQVANV++ +   +
Sbjct: 8   LESVKQDMDAAVKHLDHAFQRIRAGRASTTMVQDVMVEYYGAMTPINQVANVSIPDAMTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+  + ++E+ I  SNLG  P   G+ + + VP  TEERR  L K A A AE++K
Sbjct: 68  SIQPWDRTAINAIEKAIINSNLGFAPSNNGENIILNVPPLTEERRKELAKQAKAEAEQTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN R+DG+  LK   K    SED++  +E +IQ  TD  +K  D   + K+ EIM
Sbjct: 128 VTVRNARQDGLKELK---KLDGVSEDVIKGVEEEIQTYTDKYVKLCDEHLKTKEAEIM 182


>gi|183601689|ref|ZP_02963059.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241190812|ref|YP_002968206.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196218|ref|YP_002969773.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183219295|gb|EDT89936.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240249204|gb|ACS46144.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250772|gb|ACS47711.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793801|gb|ADG33336.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 173

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 103/172 (59%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   K++   +RTGR +P++L+ + VE YG+  PL  VA + V EPR L V+ +D 
Sbjct: 1   MKKSVESTKENFAGIRTGRANPALLNGIVVEYYGAPTPLKHVATIGVPEPRTLSVTPFDP 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
               +VE+ + +S+LG +P   G  + + +PE TE+RR   VK+A + AE  K++VRNIR
Sbjct: 61  SQANAVEKALRDSDLGASPRRNGSAILLTMPELTEDRRKEYVKLAKSKAEDGKVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R   + + K+ K G+  ED    L  ++ K+T +T   +D+  E K+KEIM 
Sbjct: 121 RKSKEAIDKAVKDGEMGEDEGDRLLKELDKVTKATTDELDALLEAKQKEIME 172


>gi|288818005|ref|YP_003432352.1| ribosome recycling factor [Hydrogenobacter thermophilus TK-6]
 gi|288787404|dbj|BAI69151.1| ribosome recycling factor [Hydrogenobacter thermophilus TK-6]
 gi|308751605|gb|ADO45088.1| ribosome recycling factor [Hydrogenobacter thermophilus TK-6]
          Length = 181

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 107/173 (61%), Gaps = 4/173 (2%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   ++  K ++  LRTGR S ++++ +KVE YGS VP+ Q+ +++V E   +V+ +WD 
Sbjct: 13  MKKAVNHFKNEIGGLRTGRASTALVEELKVEYYGSKVPIKQLGSISVPEANQIVLQLWDS 72

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             V +VE+ I E  LGLNP  +G  LRI +P  TEERR  LV++ H  AE++++++RNIR
Sbjct: 73  NAVPNVEKVIMEE-LGLNPQRQGNTLRIILPPLTEERRKELVRLLHKMAEEARVAIRNIR 131

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  + +++       SED +    + +QK+TD  I  I+   E K+KEIM  
Sbjct: 132 RDAKEMIEELE---GVSEDEIKRALDRLQKLTDRYIDQINHLVETKEKEIMEL 181


>gi|29839811|ref|NP_828917.1| ribosome recycling factor [Chlamydophila caviae GPIC]
 gi|33301547|sp|Q824U6|RRF_CHLCV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29834158|gb|AAP04795.1| ribosome recycling factor [Chlamydophila caviae GPIC]
          Length = 180

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 111/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + +M   + F  K++ + RTG+ +P++++ V V+ YG+ + L+ +A+++V + R L
Sbjct: 4   LTDTEKKMAAALEFFHKEVRSFRTGKANPALVETVTVDVYGTTMRLSDLASISVADTRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +D   V+++ +GI  +NL L P VEG ++RI VPE T E R  ++K     +E++K
Sbjct: 64  VISPYDANNVSAISKGIIAANLNLQPDVEGTIVRIKVPEPTAEYRNEVIKQLRRKSEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR+  D LK   K    +ED V  +E  +Q++TD   K ID   ++K+ E+
Sbjct: 124 VAIRNIRRESNDKLK---KDSDLTEDAVKGMEKKVQELTDKFCKQIDEITKQKEAEL 177


>gi|302187901|ref|ZP_07264574.1| ribosome recycling factor [Pseudomonas syringae pv. syringae 642]
          Length = 185

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 105/177 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  + +I+   ++K+ ++M
Sbjct: 127 AVRNIRRDALSQLKDLVKEKEISEDEERRAADDVQKLTDKFVADIEVAVKQKEADLM 183


>gi|15605410|ref|NP_220196.1| ribosome recycling factor [Chlamydia trachomatis D/UW-3/CX]
 gi|255311504|ref|ZP_05354074.1| ribosome recycling factor [Chlamydia trachomatis 6276]
 gi|255317806|ref|ZP_05359052.1| ribosome recycling factor [Chlamydia trachomatis 6276s]
 gi|6831537|sp|O84684|RRF_CHLTR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|3329129|gb|AAC68272.1| Ribosome Releasing Factor [Chlamydia trachomatis D/UW-3/CX]
 gi|296436219|gb|ADH18393.1| ribosome recycling factor [Chlamydia trachomatis G/9768]
 gi|296437147|gb|ADH19317.1| ribosome recycling factor [Chlamydia trachomatis G/11222]
 gi|296438079|gb|ADH20240.1| ribosome recycling factor [Chlamydia trachomatis G/11074]
 gi|297140580|gb|ADH97338.1| ribosome recycling factor [Chlamydia trachomatis G/9301]
 gi|297748808|gb|ADI51354.1| Ribosome Recycling Factor (RRF) [Chlamydia trachomatis D-EC]
 gi|297749688|gb|ADI52366.1| Ribosome Recycling Factor (RRF) [Chlamydia trachomatis D-LC]
          Length = 179

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    RTG+  P++++ V VE YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMVGVLTFFQKETRGFRTGKAHPALVETVTVEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LLSPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDNLTEDAVKSLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|297156857|gb|ADI06569.1| ribosome recycling factor [Streptomyces bingchenggensis BCW-1]
          Length = 185

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 102/173 (58%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAMTPINQLASFSVPEPRMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE TE+RR   +KVA    E +KIS+R++
Sbjct: 72  KTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEQRRKEFIKVAKGKGEDAKISIRSV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 132 RRKAKESIDKLIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|28868743|ref|NP_791362.1| ribosome recycling factor [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213969121|ref|ZP_03397260.1| ribosome recycling factor [Pseudomonas syringae pv. tomato T1]
 gi|301383984|ref|ZP_07232402.1| ribosome recycling factor [Pseudomonas syringae pv. tomato Max13]
 gi|302064130|ref|ZP_07255671.1| ribosome recycling factor [Pseudomonas syringae pv. tomato K40]
 gi|302134057|ref|ZP_07260047.1| ribosome recycling factor [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|34924934|sp|Q886P0|RRF_PSESM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|28851982|gb|AAO55057.1| ribosome recycling factor [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213926119|gb|EEB59675.1| ribosome recycling factor [Pseudomonas syringae pv. tomato T1]
 gi|331016370|gb|EGH96426.1| ribosome recycling factor [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 185

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 105/177 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  + +I+   ++K+ ++M
Sbjct: 127 AVRNIRRDALSQLKDLVKDKEISEDEERRAADDVQKLTDKFVADIEVAVKQKEADLM 183


>gi|308800952|ref|XP_003075257.1| putative Ribosome recycling factor, (ISS) [Ostreococcus tauri]
 gi|116061811|emb|CAL52529.1| putative Ribosome recycling factor, (ISS) [Ostreococcus tauri]
          Length = 236

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 101/172 (58%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  T+  +  D  T+RTGR + S+LD ++V+ YG+  PL  +AN +  + + +V+  +
Sbjct: 62  ERMEKTMDAIANDFSTVRTGRANASVLDRIEVDYYGAATPLKTIANASTPDAQTIVIQPF 121

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  +  +ER I+ES+LG+ P  +G V+R+ VP  TEERR  L K+     E  K+++RN
Sbjct: 122 DKGAIKDIERAINESDLGMTPSNDGNVIRLNVPTLTEERRKELAKLVSKLGEDGKVALRN 181

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +RRD M   +K  K     ED +A L+  ++ +T + +K +D     K  E+
Sbjct: 182 VRRDAMKAYEKLEKDNALGEDEIAKLKKSMEDLTSAYVKKVDEATAAKSAEL 233


>gi|330444066|ref|YP_004377052.1| ribosome recycling factor [Chlamydophila pecorum E58]
 gi|328807176|gb|AEB41349.1| ribosome recycling factor [Chlamydophila pecorum E58]
          Length = 180

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 109/180 (60%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + +M  T+ F +K++ T RTG+  P++++ V V+ YG+ + L+ +++++V + R L
Sbjct: 4   LRDAETKMASTLEFFQKEIKTFRTGKAHPALVETVTVDVYGTTMRLSDISSISVADARQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VVS +D    +++ +GI  +NL L P VEG ++RI VPE T E R  ++K      E++K
Sbjct: 64  VVSPYDANNASAIAKGILAANLNLQPEVEGAIIRIRVPEPTAELRQDIIKQLRRKCEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +RNIRR+  D +K   K    +ED V   E  +Q++TD   K ID   ++K+ +I   
Sbjct: 124 IQIRNIRRETNDKVK---KDSTLTEDAVKGAEKKVQELTDKFCKQIDEIAKQKEIDIASL 180


>gi|313158407|gb|EFR57806.1| ribosome recycling factor [Alistipes sp. HGB5]
          Length = 185

 Score =  125 bits (313), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 107/178 (60%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L     RM   I  L+++++ +R G+ SP+ L+ + V+ +GS VP++  A+VTV + + +
Sbjct: 7   LNEASGRMQKAIDHLEEELLNVRAGKASPNALNGIMVDYFGSQVPVSGAASVTVPDAKTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK M+  +E+ I +SN+GL P   G+ +R+ +P  TEERR  LVK     AE ++
Sbjct: 67  LIQPWDKNMLRPLEKAIIDSNIGLTPSNNGEQIRLTIPPLTEERRKELVKQIRGEAETAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IS+RN RRD ++  KK++K G   ED     E   QK+ +   K +D   + K+KEIM
Sbjct: 127 ISLRNARRDAVEAFKKAQKEG-MPEDESKDGETQSQKLLEKFSKLLDEALQRKEKEIM 183


>gi|118474254|ref|YP_892896.1| ribosome recycling factor [Campylobacter fetus subsp. fetus 82-40]
 gi|166230773|sp|A0RRR3|RRF_CAMFF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118413480|gb|ABK81900.1| ribosome recycling factor [Campylobacter fetus subsp. fetus 82-40]
          Length = 185

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 101/167 (60%)

Query: 18  ISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVA 77
           +  LK+D  TLRTG+V+ +++D + V+ YGS   LNQVA V   +   + +S W+K M+ 
Sbjct: 17  LEVLKRDFTTLRTGKVNINIVDHINVDYYGSPTALNQVATVLATDASTISISPWEKTMLK 76

Query: 78  SVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGM 137
           ++   I  +N+G+NP  +G  +++  P  T E R    K A +  EK+K+++RNIR+D  
Sbjct: 77  AISSAIQAANIGVNPNNDGDSVKLFFPPMTTEDRQKNAKEARSMGEKAKVAIRNIRKDAN 136

Query: 138 DHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           D +KK  K    SED +    +++QKITDS I  ID   ++K+ E++
Sbjct: 137 DDIKKIEKDKSVSEDEIKKGYDEVQKITDSYISKIDQLVKDKEAELL 183


>gi|330950678|gb|EGH50938.1| ribosome recycling factor [Pseudomonas syringae Cit 7]
          Length = 213

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 104/177 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  LK   K  + SED      +DIQK+TD  +  I+   ++K+ ++M
Sbjct: 127 AVRNIRRDALSQLKDLVKEKEISEDEERRAADDIQKLTDKFVAEIEVAVKQKEADLM 183


>gi|148238974|ref|YP_001224361.1| ribosome recycling factor [Synechococcus sp. WH 7803]
 gi|166231523|sp|A5GJE9|RRF_SYNPW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|147847513|emb|CAK23064.1| Ribosome recycling factor [Synechococcus sp. WH 7803]
          Length = 182

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 104/176 (59%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           +++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + +
Sbjct: 5   DLESSMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQI 64

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   +A +E+ I  S LG  P  +G+V+RI VP  TEERR    K+A  YAE+ K++
Sbjct: 65  QPFDISALALIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVA 124

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +RN+RRD +D +KK  K G+ SED     ++ +QK  D  I  ++     K+ +I+
Sbjct: 125 LRNLRRDAIDKIKKQEKEGEFSEDQSRDAQDSVQKTLDKFIAEVEQHLATKEADIL 180


>gi|15618609|ref|NP_224895.1| ribosome recycling factor [Chlamydophila pneumoniae CWL029]
 gi|15836231|ref|NP_300755.1| ribosome recycling factor [Chlamydophila pneumoniae J138]
 gi|16752341|ref|NP_444599.1| ribosome recycling factor [Chlamydophila pneumoniae AR39]
 gi|33242057|ref|NP_876998.1| ribosome recycling factor [Chlamydophila pneumoniae TW-183]
 gi|6707740|sp|Q9Z7K6|RRF_CHLPN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|4377002|gb|AAD18838.1| Ribosome Releasing Factor [Chlamydophila pneumoniae CWL029]
 gi|7188986|gb|AAF37940.1| ribosome recycling factor [Chlamydophila pneumoniae AR39]
 gi|8979071|dbj|BAA98906.1| ribosome releasing factor [Chlamydophila pneumoniae J138]
 gi|33236567|gb|AAP98655.1| ribosome releasing factor [Chlamydophila pneumoniae TW-183]
 gi|269302486|gb|ACZ32586.1| ribosome recycling factor [Chlamydophila pneumoniae LPCoLN]
          Length = 180

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 109/177 (61%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ + +M   + F  K++ + RTG+  P++++ V V+ YG+ + L+ +A+++V + R L
Sbjct: 4   LQDTEKKMAAALDFFHKEVKSFRTGKAHPALVETVVVDVYGTTMRLSDIASISVADLRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +D    +++ +GI  +NL L P VEG ++RI VPE T + R  ++K      E++K
Sbjct: 64  VISPYDGNNASAIAKGIIAANLNLQPEVEGSIIRIKVPEPTADYRQEMIKQLRRKCEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIRR+  D LK   K    +ED+V   E  IQ++TD   K +D   ++K+ EI
Sbjct: 124 INVRNIRREANDKLK---KDSALTEDVVKGNEKKIQELTDKFCKQLDELTKQKEAEI 177


>gi|300866975|ref|ZP_07111646.1| Ribosome-recycling factor [Oscillatoria sp. PCC 6506]
 gi|300335010|emb|CBN56812.1| Ribosome-recycling factor [Oscillatoria sp. PCC 6506]
          Length = 182

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 109/177 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D M   +   ++   T+RTGR + S+LD V V+ YGS  P+  +A+++  +   +
Sbjct: 3   LAEAEDHMQKAVESTQRSFNTIRTGRANASLLDRVMVDYYGSPTPIKSLASISTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D++ +  +E+ I  S++GL P  +G V+R+ +P  T +RRL LVK+A  ++E+ K
Sbjct: 63  NIQPFDRKTINLIEKAISLSDVGLTPSNDGSVIRLNIPPLTTDRRLELVKLAAKFSEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +S+RNIRRD ++ ++K  KS + S+D    L++ +QK+TD  I  I+     K+K+I
Sbjct: 123 VSIRNIRRDAVESIRKQEKSSELSKDEARDLQDKMQKLTDKYIAKIEEVLAAKEKDI 179


>gi|330872736|gb|EGH06885.1| ribosome recycling factor [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 185

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 104/177 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLAHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  +  I+   ++K+ ++M
Sbjct: 127 AVRNIRRDALSQLKDLVKDKEISEDEERRAADDVQKLTDKFVAEIEVAVKQKEADLM 183


>gi|329942362|ref|ZP_08291172.1| ribosome recycling factor [Chlamydophila psittaci Cal10]
 gi|332287003|ref|YP_004421904.1| ribosome recycling factor [Chlamydophila psittaci 6BC]
 gi|313847600|emb|CBY16588.1| putative ribosome recycling factor [Chlamydophila psittaci RD1]
 gi|325506673|gb|ADZ18311.1| ribosome recycling factor [Chlamydophila psittaci 6BC]
 gi|328815272|gb|EGF85260.1| ribosome recycling factor [Chlamydophila psittaci Cal10]
 gi|328914234|gb|AEB55067.1| ribosome recycling factor [Chlamydophila psittaci 6BC]
          Length = 180

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 111/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + +M   + F  K++ + RTG+ +P++++ V V+ YG+ + L+ +A+++V + R L
Sbjct: 4   LADTEKKMAAALEFFTKEVRSFRTGKANPALVETVTVDVYGTTMRLSDLASISVADTRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +D   V+++ +GI  +NL L P VEG ++RI +PE T E R  ++K     +E++K
Sbjct: 64  VISPYDANNVSAISKGIIAANLNLQPDVEGSIVRIKIPEPTAEYRNEVIKQLRRKSEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR+  D LK   K    +ED V  +E  IQ++TD   K ID   ++K+ ++
Sbjct: 124 VAIRNIRRESNDKLK---KDSDLTEDAVKGMEKKIQELTDKFCKQIDEMTKQKEADL 177


>gi|330964144|gb|EGH64404.1| ribosome recycling factor [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 185

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 104/177 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  +  I+   ++K+ ++M
Sbjct: 127 AVRNIRRDALSQLKDLVKDKEISEDEERRAADDVQKLTDKFVAEIEVAVKQKEADLM 183


>gi|326776287|ref|ZP_08235552.1| Ribosome-recycling factor [Streptomyces cf. griseus XylebKG-1]
 gi|326656620|gb|EGE41466.1| Ribosome-recycling factor [Streptomyces cf. griseus XylebKG-1]
          Length = 185

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 103/173 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V E RM VV+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEARMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R+I
Sbjct: 72  KSALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEYIKVAKTKAEDSKISIRSI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   + L K  K  ++ ED V   E ++   T   +  +D   + K+ E++ 
Sbjct: 132 RRKAKETLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|326333657|ref|ZP_08199894.1| ribosome recycling factor [Nocardioidaceae bacterium Broad-1]
 gi|325948563|gb|EGD40666.1| ribosome recycling factor [Nocardioidaceae bacterium Broad-1]
          Length = 185

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L     +M  ++   ++D  T+R GR +P M + + V+ YG+  P+ Q+A+ T  EPR++
Sbjct: 6   LNEADSKMAKSVDSTREDFATIRAGRATPQMFNKILVDYYGTPTPIQQLASFTSPEPRII 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ +D   +A+VE+ I +S+LG+NP  +G++LR   PE TEERR   +K+A   AE+ +
Sbjct: 66  NIAPFDIGAMANVEKAIRDSDLGVNPSNDGKILRAVFPELTEERRKEYIKLAKEKAEQGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVR +R+     L+K  K G+AS+D V   E  +  +T      ID   + K+ E++ 
Sbjct: 126 VSVRQVRQKAKQGLEKLEKDGEASKDDVTGAEKRLDSLTKKHTDAIDDLLKSKEAELLE 184


>gi|322379208|ref|ZP_08053599.1| ribosome recycling factor [Helicobacter suis HS1]
 gi|322379720|ref|ZP_08054033.1| ribosome recycling factor [Helicobacter suis HS5]
 gi|321147869|gb|EFX42456.1| ribosome recycling factor [Helicobacter suis HS5]
 gi|321148348|gb|EFX42857.1| ribosome recycling factor [Helicobacter suis HS1]
          Length = 187

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 110/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ +++M  ++  L KD  TLR+G+VS ++L+ V+V+ Y S  PLNQVA++   +   L 
Sbjct: 9   QHSQEQMQKSLQSLLKDFTTLRSGKVSINLLEHVRVDYYNSPTPLNQVASILSTDASTLT 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K ++  +ER + E+NLG+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 69  ITPWEKGLLKEIERALQEANLGVNPNNDGETIKLFFPPMTSEQRKEIAKEAKAMGEKAKV 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIR+D  + +KK  K    S D       ++QK TD+ I  I+   + K++E++
Sbjct: 129 AVRNIRQDANNQIKKLEKEKSISADENKKALAEVQKHTDAFINKIEQAVKAKEEEVL 185


>gi|182435653|ref|YP_001823372.1| ribosome recycling factor [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178464169|dbj|BAG18689.1| putative ribosome recycling factor [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 186

 Score =  124 bits (312), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 103/173 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V E RM VV+ +D
Sbjct: 13  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEARMAVVTPFD 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R+I
Sbjct: 73  KSALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEYIKVAKTKAEDSKISIRSI 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RR   + L K  K  ++ ED V   E ++   T   +  +D   + K+ E++ 
Sbjct: 133 RRKAKETLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLE 185


>gi|57505745|ref|ZP_00371671.1| ribosome recycling factor [Campylobacter upsaliensis RM3195]
 gi|57016018|gb|EAL52806.1| ribosome recycling factor [Campylobacter upsaliensis RM3195]
          Length = 185

 Score =  124 bits (312), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 112/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD ++V+ YGS  PLNQVA V  
Sbjct: 2   LNEIYEKQ--KTQAEKSLEALKKDFTTLRTGKVNVHILDPIQVDYYGSATPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++E  I  +N+G+NP  +G+ +++  P  T+E+R   VK A A
Sbjct: 60  SDASTISITPWEKPMLKAIESAIAAANIGVNPNNDGESVKLFFPPMTKEQREENVKHAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RN R+D  D +KK  K    SED      +++QK+TD     ID   ++K+
Sbjct: 120 MGEKAKVSIRNGRKDANDTIKKLEKDKAISEDEAKKAYDEVQKLTDLYTHKIDESVKDKE 179

Query: 181 KEIM 184
            +++
Sbjct: 180 TQLL 183


>gi|66044594|ref|YP_234435.1| ribosome recycling factor [Pseudomonas syringae pv. syringae B728a]
 gi|71733636|ref|YP_275975.1| ribosome recycling factor [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257487081|ref|ZP_05641122.1| ribosome recycling factor [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289626032|ref|ZP_06458986.1| ribosome recycling factor [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651451|ref|ZP_06482794.1| ribosome recycling factor [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|75503001|sp|Q4ZWS5|RRF_PSEU2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123635426|sp|Q48F62|RRF_PSE14 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|63255301|gb|AAY36397.1| Ribosome recycling factor [Pseudomonas syringae pv. syringae B728a]
 gi|71554189|gb|AAZ33400.1| ribosome recycling factor [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320323117|gb|EFW79206.1| ribosome recycling factor [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329611|gb|EFW85600.1| ribosome recycling factor [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330867586|gb|EGH02295.1| ribosome recycling factor [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330878176|gb|EGH12325.1| ribosome recycling factor [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330894596|gb|EGH27257.1| ribosome recycling factor [Pseudomonas syringae pv. mori str.
           301020]
 gi|330985111|gb|EGH83214.1| ribosome recycling factor [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009284|gb|EGH89340.1| ribosome recycling factor [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 185

 Score =  124 bits (312), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 104/177 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  +  I+   ++K+ ++M
Sbjct: 127 AVRNIRRDALSQLKDLVKEKEISEDEERRAADDVQKLTDKFVAEIEVAVKQKEADLM 183


>gi|317969623|ref|ZP_07971013.1| ribosome recycling factor [Synechococcus sp. CB0205]
          Length = 179

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 104/172 (60%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   ++   T+RTGR + S+LD ++VE YG+  PL  +A ++  +   + +  +D 
Sbjct: 7   MRKSVDSTQRTFNTIRTGRANASLLDKIQVEYYGADTPLKSLATISTPDSSTIQLQPFDG 66

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E+ I  S+LGL    +G+++RI +P  TE+RR  L K+A  YAE+ K+++RN+R
Sbjct: 67  SSLGLIEKAISMSDLGLTCNNDGKLIRINIPPLTEDRRKELCKLAAKYAEEGKVALRNVR 126

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RD +D +KK  K G+ SED     ++ +QK+TD  I  I+    EK+ +I+ 
Sbjct: 127 RDAIDKVKKQEKEGEFSEDQSRDEQDKVQKLTDKFIAEIEKLLAEKEADILK 178


>gi|229820990|ref|YP_002882516.1| ribosome recycling factor [Beutenbergia cavernae DSM 12333]
 gi|259494534|sp|C5BWT8|RRF_BEUC1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229566903|gb|ACQ80754.1| ribosome recycling factor [Beutenbergia cavernae DSM 12333]
          Length = 185

 Score =  124 bits (311), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 107/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M   +   + ++  +RTGR + ++   + V+ YG+  PL Q+A +T+ E R++
Sbjct: 6   LLEAEDKMDKAVEVARDELGAIRTGRANAALFQKILVDYYGAPTPLQQLAGITIPEARVI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+   + +E+ +  S+LG+NP  +G V+RI +P+ TEERR   VK+A    E ++
Sbjct: 66  LINPYDRGAASEIEKALRASDLGVNPSDDGNVIRIVLPQLTEERRREYVKLAKGKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVR +RR   D L +  + G+A ED VA  E +++  T S +  ID     K++E++ 
Sbjct: 126 VSVRAVRRKAKDELDRIVRDGEAGEDEVARAEKELELATKSHVDAIDDLLSHKERELLE 184


>gi|297891|emb|CAA51077.1| nuclear located protein [Daucus carota]
          Length = 167

 Score =  124 bits (311), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 96/153 (62%)

Query: 32  RVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLN 91
           R +P MLD +KVE YG+   L  +A ++  +   L+V+ +DK  +  +E+ I  S+LG+ 
Sbjct: 13  RSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLLVNPYDKSSLKDIEKAIVNSDLGIT 72

Query: 92  PIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASE 151
           P  +G V+R+ +P+ T +RR  L K+    AE+ K+++RNIRRD +    K  K  K SE
Sbjct: 73  PNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVALRNIRRDAIKSYDKLEKEKKLSE 132

Query: 152 DMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           D V  L +D+QK+ D  IK +DS F++K+KE+M
Sbjct: 133 DNVKDLSSDLQKVIDEYIKKVDSIFKQKEKELM 165


>gi|1149697|emb|CAA60206.1| rrf [Clostridium perfringens]
          Length = 132

 Score =  124 bits (311), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 59/129 (45%), Positives = 89/129 (68%)

Query: 47  GSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPET 106
           GS  PLNQVANV+  EPR+LV++ W+K M+  +E+ I +S+LG+NP  +G ++R+ VPE 
Sbjct: 1   GSMCPLNQVANVSSPEPRLLVITPWEKPMLKEIEKAILKSDLGINPNNDGTIIRLLVPEL 60

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           TEE R  LVK      E++K+++R+IR+D  D +K  +K G  +ED +   E+DIQK+TD
Sbjct: 61  TEETRKNLVKNVKKVGEQAKVAIRSIRKDANDKVKNFKKEGTITEDEMKKGEDDIQKVTD 120

Query: 167 STIKNIDSF 175
             +K ID+ 
Sbjct: 121 KFVKEIDTI 129


>gi|283955658|ref|ZP_06373151.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792883|gb|EFC31659.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 1336]
          Length = 185

 Score =  124 bits (311), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 103/168 (61%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
           ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V   +   + ++ W+K ++
Sbjct: 16  SLEALKKDFTTLRTGKVNTHILDHITVDYYGTQAPLNQVATVLASDASTISITPWEKPLL 75

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
            ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A  EK+K+S+RNIR+D 
Sbjct: 76  KTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKAMGEKAKVSIRNIRKDA 135

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            D +KK  K    SED      +++QK+T++    ID   + K+ E++
Sbjct: 136 NDAVKKLEKDKAISEDEAKKAYDEVQKLTNAYTIKIDESVKSKESELL 183


>gi|311744119|ref|ZP_07717925.1| ribosome recycling factor [Aeromicrobium marinum DSM 15272]
 gi|311313249|gb|EFQ83160.1| ribosome recycling factor [Aeromicrobium marinum DSM 15272]
          Length = 185

 Score =  124 bits (311), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 101/177 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+    +M   +   +++   +RTGR  P+M   +  + YG+  PL Q+A   V EPR +
Sbjct: 6   LREADTKMAKAVEHTREEFAAIRTGRAHPAMFAQITADYYGTPTPLQQLAGFQVPEPRTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D    +++ER I +S+LG+NP  +G+VLR+ +PE TEERR   VK+A   AE  K
Sbjct: 66  IISPYDAGAKSAIERAIRDSDLGVNPTDDGKVLRVSLPELTEERRKEYVKLARTKAEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+RR+    L ++ K  + S+D     E  +  +T   +  ID   + K+ E+
Sbjct: 126 IAVRNLRRNAKQALDRAEKESEISKDDNTGAEKRLDALTKKYVDLIDEVLKGKEAEL 182


>gi|262198484|ref|YP_003269693.1| ribosome recycling factor [Haliangium ochraceum DSM 14365]
 gi|262081831|gb|ACY17800.1| ribosome recycling factor [Haliangium ochraceum DSM 14365]
          Length = 185

 Score =  124 bits (311), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K  M   I   ++++  +RTGR + S+LD VKV+ YGS  PL+QVA++ V E R++
Sbjct: 6   LSDTKSGMEKAIEAFERELAKVRTGRANLSLLDGVKVDYYGSPTPLSQVASLNVAEARLM 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  WDK M+  +++ I  ++LG+NPI + +++R+P+P  T+ERR  L K     AE ++
Sbjct: 66  TVKPWDKNMIPLIDKAIRAADLGINPISDAELIRLPIPALTKERRNDLAKQTKKMAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I+VR  RRDG D L+ + K  + SED     +  IQ++TD  +  ID     K+++I+
Sbjct: 126 IAVRAARRDGNDMLRAAEKEKEVSEDESKQGQKQIQELTDEYVAKIDKLAAAKEQDIL 183


>gi|237800146|ref|ZP_04588607.1| ribosome recycling factor [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331023003|gb|EGI03060.1| ribosome recycling factor [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 185

 Score =  124 bits (310), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 101/172 (58%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L V  ++
Sbjct: 12  RMQKSLESLAHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQVVAFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE ++++VRNI
Sbjct: 72  RNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARVAVRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  LK   K  + SED      +DIQK+TD  +  I+   ++K+ ++M
Sbjct: 132 RRDALSQLKDLVKEKEISEDEERRGADDIQKLTDKFVAEIEVAVKQKEADLM 183


>gi|189485408|ref|YP_001956349.1| ribosome recycling factor [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|254809541|sp|B1H056|RRF_UNCTG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|170287367|dbj|BAG13888.1| ribosome recycling factor [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 186

 Score =  124 bits (310), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 113/172 (65%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  TI  LK ++ ++RTGRV+ + ++ +KVE+YGS +P+NQ+A+++V + R + +  WD 
Sbjct: 14  MKRTIDRLKCELSSIRTGRVNSAAIETIKVESYGSIMPINQIASISVSDARTIEIRPWDV 73

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             ++++E+ I ++++G++P  +G+++R+ VP  T+ERR  + K     AE+ ++++RN R
Sbjct: 74  SQLSAIEKAILKADIGMSPANDGKLIRVSVPHLTQERRKEIAKSIGKMAEEFRVAIRNER 133

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R  ++++KK  K    +ED    LE + QK+TD  IK ID     K+KE+M 
Sbjct: 134 RVLVENIKKLEKDKVITEDDKKKLEVEAQKVTDGYIKKIDDSIVVKEKEVMQ 185


>gi|62184691|ref|YP_219476.1| ribosome recycling factor [Chlamydophila abortus S26/3]
 gi|81313123|sp|Q5L766|RRF_CHLAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|62147758|emb|CAH63502.1| putative ribosome recycling factor [Chlamydophila abortus S26/3]
          Length = 180

 Score =  124 bits (310), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 108/173 (62%), Gaps = 3/173 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + +M   + F  K++ + RTG+ +P++++ V V+ YG+ + L+ +A+++V + R L
Sbjct: 4   LADTEKKMAAALEFFTKEVRSFRTGKANPALVETVTVDVYGTTMRLSDLASISVADTRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +D   V+++ +GI  +NL L P VEG ++RI +PE T E R  ++K     +E++K
Sbjct: 64  VISPYDANNVSAISKGIIAANLNLQPDVEGSIVRIKIPEPTAEYRNEVIKQLRRKSEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           +++RNIRR+  D LK   K    +ED V  +E  IQ++TD   K ID   ++K
Sbjct: 124 VAIRNIRRESNDKLK---KDSDLTEDAVKGMEKKIQELTDKFCKQIDKMSKQK 173


>gi|325962762|ref|YP_004240668.1| ribosome recycling factor [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468849|gb|ADX72534.1| ribosome recycling factor [Arthrobacter phenanthrenivorans Sphe3]
          Length = 185

 Score =  124 bits (310), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 104/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D  ++RTGR +P + + V VE YGS  PL Q+A+  + + R +
Sbjct: 6   LLEAEEKMDKAVEVAKEDFASVRTGRANPGLYNKVLVEYYGSPTPLQQLASFAIPDARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +ER + +S +G NP  +G V+RI +PE T+ERR   VK+     E +K
Sbjct: 66  LITPFDKTALRDIERALSDSEVGANPSNDGNVIRITIPELTKERRKEYVKIVKTKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RNIRR   + L +  K G+A ED     E ++  +T + +  ID   + K+ E++ 
Sbjct: 126 VSIRNIRRKAKETLDRLVKDGEAGEDEGTRAEKELDNLTKAHVDGIDELLKRKEAELLE 184


>gi|289675260|ref|ZP_06496150.1| ribosome recycling factor [Pseudomonas syringae pv. syringae FF5]
 gi|330896060|gb|EGH28281.1| ribosome recycling factor [Pseudomonas syringae pv. japonica str.
           M301072PT]
 gi|330936821|gb|EGH40974.1| ribosome recycling factor [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330975398|gb|EGH75464.1| ribosome recycling factor [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 185

 Score =  124 bits (310), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 103/177 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLAQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  +  I+   ++K+ ++M
Sbjct: 127 AVRNIRRDALSQLKDLVKEKEISEDEERRAADDVQKLTDKFVAEIEVAVKQKEADLM 183


>gi|162454452|ref|YP_001616819.1| hypothetical protein sce6172 [Sorangium cellulosum 'So ce 56']
 gi|189044078|sp|A9GGK7|RRF_SORC5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|161165034|emb|CAN96339.1| rrf [Sorangium cellulosum 'So ce 56']
          Length = 185

 Score =  124 bits (310), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ +++ +   I  L++D+  +RTGR + +MLD ++V+ YG   P+ Q+A V+V EPR++
Sbjct: 6   IKELREGIEKAIEALRRDLAKVRTGRANAAMLDGIRVDYYGVPTPIVQMATVSVPEPRLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  W+K  V ++E+ I ES+LGLNP V+  ++R+P+P  TEERR  +VK+     E  K
Sbjct: 66  SVKPWEKNQVKAIEKAIRESDLGLNPQVDADLIRLPIPPLTEERRREMVKLTKKNGEDCK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R  RRD  + +    K G  S D     +  +  +     K +D+    K+K+I+  
Sbjct: 126 VAIRKHRRDANEMIDSLEKDGDVSGDEADRAKKKVDDVVAEGTKLVDTVIAGKEKDILDV 185


>gi|119963211|ref|YP_947274.1| ribosome recycling factor [Arthrobacter aurescens TC1]
 gi|171704626|sp|A1R4W2|RRF_ARTAT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119950070|gb|ABM08981.1| ribosome recycling factor [Arthrobacter aurescens TC1]
          Length = 185

 Score =  124 bits (310), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 103/174 (59%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +   K D  ++RTGR +P++ + V VE YG+  PL Q+A+  V + R ++++ +
Sbjct: 11  EKMDKAVEVAKDDFASIRTGRANPALYNKVIVEYYGTPTPLQQLASFGVPDARTILITPY 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  +  +E+ + +S +G NP  +G V+R+ +PE T+ERR   VK+     E +K+S+R+
Sbjct: 71  DKTALRDIEKALSDSEVGANPSNDGNVIRVTIPELTKERRKEYVKIVKGKGEDAKVSIRS 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IRR   D L K  K G+A ED  A  E ++  +T   + +ID   + K+ E++ 
Sbjct: 131 IRRKAKDSLDKLVKDGEAGEDEGARAEKELDALTKQHVDSIDELLKRKEAELLE 184


>gi|297191773|ref|ZP_06909171.1| ribosome recycling factor [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721709|gb|EDY65617.1| ribosome recycling factor [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 185

 Score =  124 bits (310), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVLVAKDDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE +K
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTQDRRKEYIKVAKTKAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+R++RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++ 
Sbjct: 126 ISIRSVRRKAKETIDKLIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLE 184


>gi|163839290|ref|YP_001623695.1| ribosome recycling factor [Renibacterium salmoninarum ATCC 33209]
 gi|189044067|sp|A9WL12|RRF_RENSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|162952766|gb|ABY22281.1| ribosome recycling factor [Renibacterium salmoninarum ATCC 33209]
          Length = 185

 Score =  124 bits (310), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 103/179 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR +P +   V V+ YG+  PL Q+A+  V E R L
Sbjct: 6   LLEAEEKMDKAVEVAKEDFSAVRTGRANPGLFAKVMVDYYGAPTPLQQLASFAVPEARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E+ +  S +G NP  +G V+R+ +PE T+ERR   VK+    +E +K
Sbjct: 66  LITPFDRSALGDIEKALSNSEVGANPSNDGNVIRVVMPELTQERRREYVKIVRGKSEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IS+RNIRR   + L K  K G A ED  +  E ++  +T +  +NID   + K+ E++ 
Sbjct: 126 ISIRNIRRKAKESLDKIVKDGDAGEDEGSRAEKELDGLTKTHTENIDELLKRKEAELLE 184


>gi|302865909|ref|YP_003834546.1| ribosome recycling factor [Micromonospora aurantiaca ATCC 27029]
 gi|315502466|ref|YP_004081353.1| ribosome recycling factor [Micromonospora sp. L5]
 gi|302568768|gb|ADL44970.1| ribosome recycling factor [Micromonospora aurantiaca ATCC 27029]
 gi|315409085|gb|ADU07202.1| ribosome recycling factor [Micromonospora sp. L5]
          Length = 185

 Score =  124 bits (310), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K++   +RTGR + +M   + ++ YGS  PL Q+A++ V EPRM+
Sbjct: 6   LLEAEEKMERAIEHAKEEFGGIRTGRANAAMFSRIVIDYYGSPTPLPQMASIAVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   + ++E+ I +S+LG NP  EG  LRI +P+ TEERR  ++KVA    E++K
Sbjct: 66  IIKPYDNSQLGAMEKAIRDSDLGANPNNEGNQLRIVLPQMTEERRRDMIKVARQKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRR   + L +  K G+  ED     E ++  +T   +  +D   + K+ E++ 
Sbjct: 126 VAVRNIRRKAKEELDRLVKDGEVGEDEGRRAEKELDDLTQRFVAGVDELVKHKESELLE 184


>gi|295396357|ref|ZP_06806523.1| ribosome recycling factor [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970797|gb|EFG46706.1| ribosome recycling factor [Brevibacterium mcbrellneri ATCC 49030]
          Length = 185

 Score =  124 bits (310), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 102/179 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+    +M   I   +     +RTGR +P +   + VE YG+  P+ Q+A+  V E R +
Sbjct: 6   LKEASAKMDGAIEATQSAFGNVRTGRANPGLFANIPVEYYGTPTPMQQLASFQVPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  S++G NP  +G V+R+ +PE TEERR   VK+    AE+ +
Sbjct: 66  LITPYDRGALTDIENALRNSDIGANPANDGNVIRVTLPELTEERRKEYVKIVKGDAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ISVRN+RR   + L++ +K G+A ED V     ++ +IT   +  IDS    K+KE++ 
Sbjct: 126 ISVRNVRRKAKEQLERIQKDGEAGEDEVKHALGELDEITKKKVDEIDSLLAAKEKELLE 184


>gi|315637821|ref|ZP_07893011.1| ribosome recycling factor [Campylobacter upsaliensis JV21]
 gi|315482062|gb|EFU72676.1| ribosome recycling factor [Campylobacter upsaliensis JV21]
          Length = 185

 Score =  123 bits (309), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 112/184 (60%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  K +   ++  LKKD  TLRTG+V+  +LD ++V+ YGS  PLNQVA V  
Sbjct: 2   LNEIYEKQ--KAQAEKSLEALKKDFTTLRTGKVNVHILDPIQVDYYGSATPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++E  I  +N+G+NP  +G+ +++  P  T+E+R   VK A A
Sbjct: 60  SDASTISITPWEKLMLKAIESAIAAANIGVNPNNDGESVKLFFPPMTKEQREENVKHAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RN R+D  D +KK  K    SED      +++QK+TD     ID   ++K+
Sbjct: 120 MGEKAKVSIRNGRKDANDTIKKLEKDKAISEDEAKKAYDEVQKLTDLYTHKIDESVKDKE 179

Query: 181 KEIM 184
            +++
Sbjct: 180 TQLL 183


>gi|149178920|ref|ZP_01857498.1| Ribosome recycling factor [Planctomyces maris DSM 8797]
 gi|148842259|gb|EDL56644.1| Ribosome recycling factor [Planctomyces maris DSM 8797]
          Length = 186

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 109/184 (59%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+Q   L + ++RM   +   +  +  +RTGR +P ++D ++V+ YGS  PL Q+ANV+V
Sbjct: 1   MDQAEILLDAEERMDKAVHVFQGQLQGIRTGRATPGLVDSIRVDYYGSPTPLKQMANVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP+ +++  +D  MV  + + I  S++GL P  +G+V+R+ +P  + ERR  +V     
Sbjct: 61  PEPQQILIRPFDAGMVGEIAKAITASDMGLAPNTDGRVVRLNIPPLSTERRRQMVSRVKE 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+++IS+RNIRRD   H  +S K     ED     ++ +Q++T      ++S  + K+
Sbjct: 121 LAEEARISIRNIRRDANKHADQSEKDKVMGEDERDDTKDQVQELTKKFEGKVNSMADAKE 180

Query: 181 KEIM 184
           K++M
Sbjct: 181 KDVM 184


>gi|296274577|ref|YP_003657208.1| ribosome recycling factor [Arcobacter nitrofigilis DSM 7299]
 gi|296098751|gb|ADG94701.1| ribosome recycling factor [Arcobacter nitrofigilis DSM 7299]
          Length = 185

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M + I  LK+D  TLRTG+VS ++LD +K++ YG+   L QV +V   +   +V++ 
Sbjct: 10  KEKMDNAIEALKRDYKTLRTGKVSTTILDGIKIDYYGTPTELTQVGSVLAPDATTIVINP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K +V  +E+ I  +N+G+NP  +G+V+++  P  T ++R    K A    + +K+++R
Sbjct: 70  WEKHLVGDIEKAIQNANIGVNPNNDGEVIKLFFPPMTVDQRKESAKQAKGMTDDAKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+   D +K   K  + ++D     +++IQKITDS +   D  F+ K+ EI+
Sbjct: 130 NIRKHANDRVKVLHKDKEITDDENKKAQDEIQKITDSYVTKADDTFKAKEAEIL 183


>gi|192360685|ref|YP_001981611.1| ribosome recycling factor [Cellvibrio japonicus Ueda107]
 gi|190686850|gb|ACE84528.1| ribosome recycling factor [Cellvibrio japonicus Ueda107]
          Length = 150

 Score =  123 bits (308), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 92/150 (61%)

Query: 37  MLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG 96
           MLD V+V  YG+  PL+QVAN+ V + R L VS W++ +V  +E+ I +S+LGLNP    
Sbjct: 1   MLDGVRVNYYGTETPLSQVANINVEDARTLSVSPWERNLVPDIEKAIMKSDLGLNPSTNN 60

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
            ++RIP+P  TEE R   +K A A AE ++++VRN+RRD +  +K   K    SED    
Sbjct: 61  GLIRIPLPMLTEETRKNFIKQARAEAENARVAVRNVRRDVLADVKALLKDKAISEDDERR 120

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            ++DIQKITD  I  +D     K+ ++M  
Sbjct: 121 AQDDIQKITDKFIAEVDKALSAKETDLMAI 150


>gi|220912157|ref|YP_002487466.1| ribosome recycling factor [Arthrobacter chlorophenolicus A6]
 gi|254809488|sp|B8HFN8|RRF_ARTCA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219859035|gb|ACL39377.1| ribosome recycling factor [Arthrobacter chlorophenolicus A6]
          Length = 185

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 104/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D  ++RTGR +P + + V V+ YGS  PL Q+A+  + + R +
Sbjct: 6   LLEAEEKMDKAVEVAKEDFASIRTGRANPGLYNRVLVDYYGSPTPLQQLASFAIPDARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +ER + +S +G NP  +G V+RI +PE T+ERR   VK+     E +K
Sbjct: 66  LITPFDKTALRDIERALSDSEVGANPSNDGNVIRITIPELTKERRKEYVKIVKTKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RNIRR   + L +  K G+A ED     E ++  +T + +  ID   + K+ E++ 
Sbjct: 126 VSIRNIRRKAKEALDRLVKDGEAGEDEGTRAEKELDGLTKAHVDGIDELLKRKEAELLE 184


>gi|269219617|ref|ZP_06163471.1| ribosome recycling factor [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269210859|gb|EEZ77199.1| ribosome recycling factor [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 185

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 109/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  T+   + +   +R+GR + +M + + V+ YG+  PL Q+  + + E R +
Sbjct: 6   LLEAEEKMEKTVEVARNEFSGIRSGRANAAMFNAILVDYYGAPTPLQQLGTIAIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +AS+++ + ES+LG+NP  +G ++R+ +P  TEERR   VK+A   AE+++
Sbjct: 66  LITPFDRSAMASIDKALRESDLGVNPTDDGNLIRVVLPALTEERRRDYVKLARNKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VR IRR   + L K +K G+A ED V   E  +  +T   ++ +D   E K+KE++ 
Sbjct: 126 VAVRGIRRKAKEALDKIKKDGEAGEDDVKRAEEKLDGLTKRHVEQVDKVLEGKEKELLE 184


>gi|89898769|ref|YP_515879.1| ribosome recycling factor [Chlamydophila felis Fe/C-56]
 gi|123482688|sp|Q252Q4|RRF_CHLFF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|89332141|dbj|BAE81734.1| ribosome recycling factor [Chlamydophila felis Fe/C-56]
          Length = 180

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 109/177 (61%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + +M   + F +K++   RTG+  P++++ V V+ YG+ + L+ +A+++V + R L
Sbjct: 4   LADTEKKMATALEFFQKEIRAFRTGKAHPALVETVTVDVYGTTMRLSDLASISVADTRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +D   V+++ +GI  +NL L P  EG ++RI +PE T E R  ++K     +E++K
Sbjct: 64  VISPYDANNVSAISKGIIAANLNLQPDAEGAIIRIKIPEPTAEYRNEVIKQLRRKSEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RN+RR+  D LK   K    +ED V  +E  IQ++TD   K ID   ++K+ ++
Sbjct: 124 VTIRNVRREANDKLK---KDSDLTEDAVKGMEKKIQELTDKFCKQIDEMSKQKEADL 177


>gi|184158417|ref|YP_001846756.1| ribosome recycling factor [Acinetobacter baumannii ACICU]
 gi|183210011|gb|ACC57409.1| Ribosome recycling factor [Acinetobacter baumannii ACICU]
          Length = 163

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/151 (44%), Positives = 97/151 (64%), Gaps = 1/151 (0%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+V  ++
Sbjct: 12  RMLKTLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLIVQPFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + MVA++++ I ES+LGLNPI     +R+P+P  TEE R  + K+A + AE +K+++RNI
Sbjct: 72  RTMVAAIDKAIRESDLGLNPIT-ADSIRVPLPALTEETRRDMQKIARSEAENAKVAIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQK 163
           RRD +  +K   K  + SED      +DI K
Sbjct: 131 RRDVLGDIKALLKEKEISEDDERRAGDDIPK 161


>gi|298488335|ref|ZP_07006367.1| Ribosome recycling factor [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157157|gb|EFH98245.1| Ribosome recycling factor [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 185

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 103/177 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLNHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFELNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  +  I+   ++K+ ++M
Sbjct: 127 AVRNIRRDALSQLKDLVKEKEISEDEERRAADDVQKLTDKFVAEIEVAVKQKEADLM 183


>gi|113477237|ref|YP_723298.1| ribosome recycling factor [Trichodesmium erythraeum IMS101]
 gi|123160353|sp|Q10Y49|RRF_TRIEI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110168285|gb|ABG52825.1| ribosome recycling factor [Trichodesmium erythraeum IMS101]
          Length = 182

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 105/179 (58%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++L+  +++M   I   K    T+RTGR + S+LD V VE YGS   L  +AN+ + +  
Sbjct: 1   MNLKEAEEKMQKAIEATKNSFNTVRTGRANASLLDRVMVEYYGSPTQLKSMANIGIPDAS 60

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + +  +DK  +  +E+ I+ S++GL P  +G ++R+ +P  T ERR  +VK     AE+
Sbjct: 61  TITIQPYDKTSLGLIEKAINMSDVGLTPNNDGSIIRLNIPALTAERRQEMVKKTAKLAEE 120

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            K+S+RNIRRD +D ++K  K+   S+D    L++ +QK TD  I  ID     K+K++
Sbjct: 121 GKVSIRNIRRDAVDSIRKQEKNSDISKDESRDLQDKVQKKTDKYIAKIDELLAAKEKDM 179


>gi|210633128|ref|ZP_03297695.1| hypothetical protein COLSTE_01608 [Collinsella stercoris DSM 13279]
 gi|210159282|gb|EEA90253.1| hypothetical protein COLSTE_01608 [Collinsella stercoris DSM 13279]
          Length = 177

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 103/180 (57%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + +I++ M   +  LK +   +RTGR + ++L  + V+ YG   P+ QVA V V E  ML
Sbjct: 1   MSDIRENMDKALESLKHNFAKVRTGRANANVLSDITVDYYGVATPITQVAAVKVPEAHML 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +V ++ + +  S+LG+ P  +G V+R+P P  TEERR  LVK     AE +K
Sbjct: 61  VIEPWDKALVNAIVKAVTASDLGITPNSDGIVVRLPFPAPTEERRRELVKECRELAEHAK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN RRD  + L++     + +ED V   +  +QK TD  +  +D   + K+ E+M  
Sbjct: 121 IAIRNTRRDANNKLERDE---ELTEDEVRREQAKVQKATDEYVSKVDEMLKAKEAEVMEI 177


>gi|229815412|ref|ZP_04445744.1| hypothetical protein COLINT_02460 [Collinsella intestinalis DSM
           13280]
 gi|229808945|gb|EEP44715.1| hypothetical protein COLINT_02460 [Collinsella intestinalis DSM
           13280]
          Length = 177

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 104/180 (57%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + +I++ M   I  LK +   +RTGR + ++L  + V+ YG   P+ QVA + V E  ML
Sbjct: 1   MSDIRENMDKAIDSLKHNFAKVRTGRANANVLSDITVDYYGVATPITQVAAIKVPEAHML 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +V ++ + +  S+LG+ P  +G V+R+P P  TEERR  LVK     AE +K
Sbjct: 61  VIEPWDKALVNAIVKAVTASDLGITPNSDGIVVRLPFPAPTEERRRELVKECRDLAEHAK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  + L++     + +ED V   +  +QK TD  +  ++   + K+ E+M  
Sbjct: 121 IAIRNIRRDANNKLERDE---ELTEDDVRREQAKVQKATDEYVARVEELLKAKEAEVMEI 177


>gi|162447997|ref|YP_001621129.1| ribosome recycling factor [Acholeplasma laidlawii PG-8A]
 gi|189044043|sp|A9NHC3|RRF_ACHLI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|161986104|gb|ABX81753.1| ribosome recycling factor [Acholeplasma laidlawii PG-8A]
          Length = 184

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 113/186 (60%), Gaps = 6/186 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+  D  L  I+++M  ++  L ++   +RTGR +P++LD + V  YG   PL QVA++
Sbjct: 1   MNEQADMILLEIEEKMEKSLEALGREYAAVRTGRANPNILDRIMVSYYGVDTPLKQVASI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +V E + L +  +DK ++  +E  I+ S+L L P  +G  +R+ +P  T ERR +LVK  
Sbjct: 61  SVPEAQQLYIKPFDKSILKDIETAINTSSLELPPRNDGTGIRLTLPALTGERRRSLVKDV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AE  K+++R+IRRDG +HLK   K G   +D    LE D+Q +TD+ +K +D   +E
Sbjct: 121 EKMAEAGKVAIRHIRRDGNEHLK---KLGLTEDDEKGYLE-DVQALTDAYVKKVDELTKE 176

Query: 179 KKKEIM 184
           K +E++
Sbjct: 177 KSEELL 182


>gi|289549254|ref|YP_003474242.1| ribosome recycling factor [Thermocrinis albus DSM 14484]
 gi|289182871|gb|ADC90115.1| ribosome recycling factor [Thermocrinis albus DSM 14484]
          Length = 182

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 112/178 (62%), Gaps = 4/178 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            ++ ++ M   ++  K ++  LRTGR S ++++ +KV+ YGS VP+ Q+ ++T+ EP  +
Sbjct: 6   FKSAEEDMKKAVNHFKNEIAGLRTGRASTALVEELKVDYYGSKVPIKQLGSITIPEPNQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++ VWD   V+++E+ I E NL L P  +G  LRI +P  TEERR  +V++ H  AE+++
Sbjct: 66  LIQVWDSNAVSAIEKAIME-NLQLTPQKQGNTLRITLPPPTEERRREMVRLLHKMAEEAR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN RRD  + ++     G + +++  +LE  +QK+TD  I  I+   E K+ EI+
Sbjct: 125 VAVRNARRDAKEMIEDM--EGISEDEIKRALER-LQKLTDKYIDEINKLTEAKETEIL 179


>gi|261885413|ref|ZP_06009452.1| ribosome recycling factor [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 185

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 99/163 (60%)

Query: 22  KKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVER 81
           K+D  TLRTG+V+ +++D + V+ YGS   LNQVA V   +   + +S W+K M+ ++  
Sbjct: 21  KRDXTTLRTGKVNINIVDHINVDYYGSPTALNQVATVLATDASTISISPWEKTMLKAISS 80

Query: 82  GIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLK 141
            I  +N+G+NP  +G  +++  P  T E R    K A +  EK+K+++RNIR+D  D +K
Sbjct: 81  AIQAANIGVNPNNDGDSVKLFFPPMTTEDRQKNAKEARSMGEKAKVAIRNIRKDANDDIK 140

Query: 142 KSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           K  K    SED +    +++QKITDS I  ID   ++K+ E++
Sbjct: 141 KIEKDKSVSEDEIKKGYDEVQKITDSYISKIDQLVKDKEAELL 183


>gi|312131765|ref|YP_003999105.1| ribosome recycling factor [Leadbetterella byssophila DSM 17132]
 gi|311908311|gb|ADQ18752.1| ribosome recycling factor [Leadbetterella byssophila DSM 17132]
          Length = 186

 Score =  122 bits (306), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 110/183 (60%), Gaps = 3/183 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++DL   ++ M   I   + ++  +R GR S +MLD V VE YG   PL+QV++VT  + 
Sbjct: 7   ILDL--TQESMEKVIKHTQIELSKIRAGRASTNMLDGVLVEYYGVMSPLSQVSSVTTPDA 64

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R + +  ++K++++ +ER I  SN+GLNP  +G+ +R+ VP  TEERR  LVK   A  E
Sbjct: 65  RTIQIKPFEKKIISDIERAIINSNIGLNPANDGETIRLNVPPLTEERRRELVKRVKAEIE 124

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +K+ +R +R++  D LKK +  G  SED + S E  +QK+T+  I+ +D     K+ +I
Sbjct: 125 VAKVGIRKVRQEMNDDLKKLKNDG-VSEDAIKSGEEKVQKLTNQYIEKVDQLLAAKEADI 183

Query: 184 MHF 186
           M  
Sbjct: 184 MQV 186


>gi|228966769|ref|ZP_04127813.1| Ribosome-recycling factor [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228792868|gb|EEM40426.1| Ribosome-recycling factor [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 142

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/128 (47%), Positives = 86/128 (67%)

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLA 113
           Q+AN+TV E R+LV+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  
Sbjct: 2   QLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRD 61

Query: 114 LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           LVKV   YAE++K++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D
Sbjct: 62  LVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVD 121

Query: 174 SFFEEKKK 181
              + K+K
Sbjct: 122 EIAKNKRK 129


>gi|297626637|ref|YP_003688400.1| ribosome recycling factor (ribosome-releasing factor) (RRF)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922402|emb|CBL56974.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 185

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 104/178 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ + +M   I F K+D   +RTGR +P+M + ++ E YG   P+ Q+A+ +  +PR +
Sbjct: 6   IKSAEKKMQGAIDFAKEDFSGVRTGRANPAMFEKLEAEYYGVPTPIQQLASFSSPDPRTM 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + ++E+ + +S+LG+NP  +G  +R  +PE TEERR   +K+    AE +K
Sbjct: 66  LITPYDKGALGAIEKAVRDSDLGVNPASDGNAIRAVLPELTEERRKEYIKIVRTKAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++R  RR GMD +K   K  +  ED     E  +  +T    + +D   + K+ E++
Sbjct: 126 IAIRGHRRRGMDAIKAQEKDKEIGEDDARVSEKQLDAVTKKYTELVDELLKAKEAELL 183


>gi|311898628|dbj|BAJ31036.1| putative ribosome recycling factor [Kitasatospora setae KM-6054]
          Length = 185

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 103/179 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K D+  +RTGR  P+M   +  E YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVGVAKDDLAAIRTGRAHPAMFAKIVAEYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  + ++E  I +S+LG+NP  +G V+R+ +P+ TEERR   +K A    E +K
Sbjct: 66  MVTPFDKTALKAIETAIRDSDLGVNPSNDGSVIRVVLPQLTEERRREYIKQARGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVR+IRR   D + K  K  +  ED     E ++  +T   +  ID   + K+ E++ 
Sbjct: 126 VSVRSIRRKAKDAIDKLVKDKEIGEDDGRRGEKELDDLTAKFVAQIDELLKHKEAELLE 184


>gi|78185216|ref|YP_377651.1| ribosome recycling factor [Synechococcus sp. CC9902]
 gi|123580806|sp|Q3AV97|RRF_SYNS9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78169510|gb|ABB26607.1| ribosome recycling factor [Synechococcus sp. CC9902]
          Length = 182

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 106/177 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   KDLEASMRKSLEATQRNFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +A++E+ I  S LG  P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISGLAAIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKMASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD +D +KK  K G  SED     ++ +QK+ D  I  ++    +K+  I+
Sbjct: 124 ALRNLRRDAIDKVKKQEKDGDFSEDQSRDEQDSVQKVLDKFIVELEKQLADKEAAIL 180


>gi|163783687|ref|ZP_02178674.1| ribosome recycling factor [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881012|gb|EDP74529.1| ribosome recycling factor [Hydrogenivirga sp. 128-5-R1-1]
          Length = 184

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 108/171 (63%), Gaps = 4/171 (2%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   + ++  +RTGR S ++++ +KVE YGS VPL Q+ N++V E   +++ VWD 
Sbjct: 16  MRKSVEHFRGEIAGIRTGRASTALVEELKVEYYGSRVPLKQLGNISVPEHNQILIQVWDN 75

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++E+ I E  L LNP  +G  +RI +P  TEERR  L ++ H  AE+++++VRNIR
Sbjct: 76  NAIPAIEKTIREE-LNLNPNTQGNTIRINLPPLTEERRKELARMLHKLAEEARVAVRNIR 134

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD  + +++    G + ++   +LE  +QK+TD  I  I+   E+K++EIM
Sbjct: 135 RDAKELIEEL--EGISEDEKKRALER-LQKLTDKHIDEINKLLEKKEEEIM 182


>gi|255535426|ref|YP_003095797.1| Ribosome recycling factor [Flavobacteriaceae bacterium 3519-10]
 gi|255341622|gb|ACU07735.1| Ribosome recycling factor [Flavobacteriaceae bacterium 3519-10]
          Length = 184

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 5/181 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +ID+   K  M   +  L+     +R GR S +M+  V VE YG+  PLNQVANV V + 
Sbjct: 7   IIDM--TKQEMDAALKHLEHAFQKIRAGRASTTMVQDVMVEYYGAPTPLNQVANVMVPDA 64

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
             + +  WD+  + ++E+ I  SNLG  P+  G+ + + VP  TEERR  L K A   AE
Sbjct: 65  MTISIQPWDRTAIGAIEKAIINSNLGFAPMNNGENIILNVPPLTEERRRDLAKQAKGEAE 124

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +K++VRN R+DGM  LK   K    SED+V   E  +Q++TD  +K  D   + K+ +I
Sbjct: 125 ATKVTVRNARQDGMKELK---KLDGVSEDLVKGGEATVQELTDKYVKLCDDQLKTKEADI 181

Query: 184 M 184
           M
Sbjct: 182 M 182


>gi|163731915|ref|ZP_02139362.1| ribosome recycling factor [Roseobacter litoralis Och 149]
 gi|161395369|gb|EDQ19691.1| ribosome recycling factor [Roseobacter litoralis Och 149]
          Length = 121

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 59/122 (48%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 1   MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELSKVAGQYAEH 60

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RNIRRDGMD +KK++  G  SED     E ++Q+ITD  IK ID     K+ EIM
Sbjct: 61  ARVSIRNIRRDGMDQIKKAKADG-MSEDDQKIWEGEVQEITDRYIKGIDEQLASKQSEIM 119

Query: 185 HF 186
             
Sbjct: 120 QV 121


>gi|221194591|ref|ZP_03567648.1| ribosome recycling factor [Atopobium rimae ATCC 49626]
 gi|221185495|gb|EEE17885.1| ribosome recycling factor [Atopobium rimae ATCC 49626]
          Length = 181

 Score =  122 bits (305), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 100/176 (56%), Gaps = 3/176 (1%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K  M   I  LK +   +RTGR +P  LD +KV+ YG   P+ Q+A V V E  +LV+  
Sbjct: 9   KASMDKGIEALKNNFARVRTGRANPHALDPIKVDYYGQPTPIMQLAAVKVPEASLLVIEP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK  + ++E+ I  S+LG+ P  +G  +R+P P  TEERR  L K     AE+++I++R
Sbjct: 69  WDKTSLKAIEKAIEASDLGITPSNDGATIRLPFPMPTEERRRELAKECAGLAEEARIAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRD    +++     + SED  A  +  IQK+TD ++  I+   + K  E+M  
Sbjct: 129 NVRRDINGKIERDE---ELSEDDQAREKKHIQKLTDDSVAEIERLLKVKTAEVMEI 181


>gi|159036877|ref|YP_001536130.1| ribosome recycling factor [Salinispora arenicola CNS-205]
 gi|189044070|sp|A8M6B4|RRF_SALAI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157915712|gb|ABV97139.1| ribosome recycling factor [Salinispora arenicola CNS-205]
          Length = 185

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K++   +RTGR + +M   + ++ YGS  PL Q+A++ V EPRM+
Sbjct: 6   LLEAEEKMERAIEHAKEEFGAIRTGRANAAMFSKIIIDYYGSPTPLPQMASIGVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D     ++E+ I +S+LG+NP  EG  LRI +P+ TEERR  ++KVA    E++K
Sbjct: 66  IIKPYDNSQTNAMEKAIRDSDLGVNPNNEGNQLRILLPQMTEERRREMIKVARHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRR   + L +  K+G+  ED     E ++  +T   +  +D   + K+ E++ 
Sbjct: 126 VAVRNIRRKAKEELDRLVKAGEVGEDEGRRAEKELDDLTQRFVGVVDELIKHKEAELLE 184


>gi|145593876|ref|YP_001158173.1| ribosome recycling factor [Salinispora tropica CNB-440]
 gi|189044073|sp|A4X4J5|RRF_SALTO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145303213|gb|ABP53795.1| ribosome recycling factor [Salinispora tropica CNB-440]
          Length = 185

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K++   +RTGR + +M   + ++ YGS  PL Q+A++ V EPRM+
Sbjct: 6   LLEAEEKMERAIEHAKEEFGAIRTGRANAAMFSKIVIDYYGSPTPLPQMASIGVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D     ++E+ I +S+LG+NP  EG  LRI +P+ TEERR  ++KVA    E++K
Sbjct: 66  IIKPYDTSQTNAMEKAIRDSDLGVNPNNEGNQLRILLPQMTEERRREMIKVARHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR   + L +  K+G+  ED     E ++  +T   +  +D   + K+ E++ 
Sbjct: 126 VAVRNVRRKAKEELDRLVKAGEVGEDDGRRAEKELDDLTQRFVGTVDELIKHKEAELLE 184


>gi|149196427|ref|ZP_01873482.1| ribosome releasing factor [Lentisphaera araneosa HTCC2155]
 gi|149140688|gb|EDM29086.1| ribosome releasing factor [Lentisphaera araneosa HTCC2155]
          Length = 188

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 107/175 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           I ++M   I+  +  +    TG+ +P+++  + V+AYG+ + L + A ++  + R + + 
Sbjct: 12  ITEKMDKAIAHFQSQIDAYSTGKATPALVQDIMVDAYGTKMRLKETAGISTPDARTIAIQ 71

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D  ++  +E+ +  +N+G+ P+ +GQ++R+P+PE TE+RR  +VK      E+ KI++
Sbjct: 72  PYDATILPDIEKALMMANIGITPMNDGQLIRLPIPELTEDRRKDMVKDLKGKGEEHKINI 131

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRR+G D+LKK+ K  + SED    L  DIQ +T+  I  I S    K+K++M
Sbjct: 132 RNIRREGNDYLKKALKDHELSEDHQKGLVTDIQDLTNKKIDEIASLSAAKEKDLM 186


>gi|320096225|ref|ZP_08027811.1| ribosome recycling factor [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319976851|gb|EFW08608.1| ribosome recycling factor [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 185

 Score =  121 bits (304), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 101/178 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M   +     +  ++RTGR + SM + + VE YG+  P+ Q+A+  + E R +
Sbjct: 6   LLEAEDKMDKAVDAASHEFASIRTGRATSSMFEQLSVEYYGAPTPMQQLASFQIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D+     + R + ES+LG+NP  +G V+R+ +P  TEERR   VK A + AE+ +
Sbjct: 66  IISPFDRTATQEILRTLRESDLGVNPTDDGNVIRVVLPALTEERRKEYVKQAKSKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVR +RR   D L + +K G+ASED V   E  +   T +    ID     K+ E++
Sbjct: 126 VSVRGVRRKAKDQLDRLKKDGEASEDDVDRAEKALDAATRAHTDQIDKMLAAKESELL 183


>gi|32491138|ref|NP_871392.1| hypothetical protein WGLp389 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173140|sp|Q8D2G5|RRF_WIGBR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|25166345|dbj|BAC24535.1| frr [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 185

 Score =  121 bits (304), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 102/162 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N   RM  +I F KK++  +RT RVSPS+++ + +  YG+ VPL++++N+   +  +L 
Sbjct: 7   ENSNSRMKKSIDFFKKNISKIRTNRVSPSLIENIYINCYGTSVPLSKLSNILSEKSNILK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D  ++  +E+ I  S+LG+NP ++   +RI  P+ TE RR  L+K+ +  AE++ I
Sbjct: 67  INVFDNNIIKKIEQAILSSDLGVNPQIQENYIRIEFPKLTEARRFELIKLINKEAEQNII 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTI 169
           S+RNIRRD  + +KK  K+    +D     +  IQ +T+S I
Sbjct: 127 SIRNIRRDANEKIKKLIKAKTIGKDEDKKFQEVIQNLTNSRI 168


>gi|110004372|emb|CAK98710.1| ribosome recycling factor protein [Spiroplasma citri]
          Length = 182

 Score =  121 bits (304), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/175 (36%), Positives = 106/175 (60%), Gaps = 3/175 (1%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M   I   + +++ +RTGR +P+ML  + ++ YG+  P+ Q+AN+ V E R LV+  
Sbjct: 10  KEKMEKVIVSFENELIKIRTGRANPNMLSHIMIDYYGTLTPIQQLANIMVPEARQLVIKP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D+ ++  +   I++++LGL P  E  ++R+ +P  TEERR  LVK     +E+ K+++R
Sbjct: 70  YDRSIINLILTAINKADLGLTPSSEADLIRLNIPPLTEERRKMLVKEMWKASEQFKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N RRD  +HLK   K    +ED     E ++QK+TD  IK ID     K+KE+M 
Sbjct: 130 NERRDSNEHLK---KDSDLTEDDKKYYEGEVQKLTDQFIKKIDEKATLKEKELME 181


>gi|317125390|ref|YP_004099502.1| ribosome recycling factor [Intrasporangium calvum DSM 43043]
 gi|315589478|gb|ADU48775.1| ribosome recycling factor [Intrasporangium calvum DSM 43043]
          Length = 185

 Score =  121 bits (303), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 102/174 (58%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   +  LK+D   +RTGR +P + + + V  YG+  PL Q+A+    EPR ++V  
Sbjct: 10  EEKMDKAVEVLKEDFAGIRTGRANPGLFNKLLVNYYGAPTPLQQLASFQNPEPRTILVVP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK  +  +E+ I +S+LG+NP  +G  +R  +PE TE+RR   +K+AH  AE+ ++S+R
Sbjct: 70  FDKSAMHEIEKAIRDSDLGVNPASDGHQIRCVMPELTEQRRKEYIKLAHHKAEEGRVSIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           N+RR     + +  K G   ED  A  E +++ +T      IDS  + K+ E++
Sbjct: 130 NVRRKAKTDIDRLVKDGDVGEDEGARAEKELEALTKKHTDLIDSLVKHKESELL 183


>gi|303277739|ref|XP_003058163.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460820|gb|EEH58114.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 167

 Score =  121 bits (303), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 99/171 (57%), Gaps = 5/171 (2%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +  L++D+  LRTGR SP ML+ + V+AYG   PL  + +VT    + L V ++D 
Sbjct: 1   MDAAVEALERDLGKLRTGRASPGMLESLVVDAYGEPTPLRNLGSVTARNAQTLAVMLYDP 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQ-VLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            +  +V+  I ES LG NP  +G   L +PVPE T E ++ + K+ H   E +KISVRN 
Sbjct: 61  TLKGAVQNAITESPLGFNPQEDGDGTLLVPVPEMTHETKVQVAKLCHRAGETAKISVRNA 120

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RR GMD +KK+      +ED     E D+QK++++ +K I+     K+K I
Sbjct: 121 RRKGMDVIKKA----TMTEDEGNRAEKDVQKMSEAFVKKIEELVSAKEKSI 167


>gi|152965386|ref|YP_001361170.1| ribosome recycling factor [Kineococcus radiotolerans SRS30216]
 gi|189044059|sp|A6W7W7|RRF_KINRD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151359903|gb|ABS02906.1| ribosome recycling factor [Kineococcus radiotolerans SRS30216]
          Length = 185

 Score =  121 bits (303), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 106/178 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K D   +RTGR + +M   + V+ YG+  PL Q+A+  + E R +
Sbjct: 6   LLEAEEKMEKAIEVAKGDFGAIRTGRANAAMFHKIMVDYYGAPTPLQQLASFQIPEARSV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  ++ +E+ +  S+LG+NP  +G V+RI +P+ TEERR   +K+A   AE ++
Sbjct: 66  LITPFDRAAMSEIEKALRNSDLGVNPGNDGNVIRIVLPQLTEERRKDYIKIARTKAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN+RR   + L +  K G+A ED V   E +++ +T   +  ID   + K+ E++
Sbjct: 126 VSLRNVRRRAKEELDRIVKDGEAGEDEVGRAEKELEAVTKKHVDAIDELLKNKEAELL 183


>gi|300214368|gb|ADJ78784.1| Ribosome-recycling factor (RRF) (Ribosome-releasing factor)
           [Lactobacillus salivarius CECT 5713]
          Length = 132

 Score =  120 bits (302), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/131 (45%), Positives = 91/131 (69%)

Query: 55  VANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLAL 114
           +A ++V E R+L+V+ +DK  + ++E  I  S+LG+ P+ +G  +R+ +P+ TEERR  L
Sbjct: 1   MAQISVPEARVLLVTPYDKSSLKNIEHAIMASDLGIAPMNDGTAIRLVIPQLTEERRKEL 60

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
            K   A +E  K++VRNIRRD MD LKK++K+G  +ED +  LEN  QK+TD +IKNID 
Sbjct: 61  AKQVKAVSETGKVAVRNIRRDMMDALKKAQKNGDLTEDDLRDLENQAQKVTDESIKNIDK 120

Query: 175 FFEEKKKEIMH 185
             E+K+KE++ 
Sbjct: 121 ITEDKEKEVLE 131


>gi|319953568|ref|YP_004164835.1| ribosome recycling factor [Cellulophaga algicola DSM 14237]
 gi|319422228|gb|ADV49337.1| ribosome recycling factor [Cellulophaga algicola DSM 14237]
          Length = 185

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 99/178 (55%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  + M  +I  L K    +R G+ +P ML  V V+ YGS  PL QVANV+  + R L
Sbjct: 9   LDSTNESMNGSIDHLVKAFAKIRAGKANPIMLSSVMVDYYGSQTPLAQVANVSTPDARTL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  W+K M+  +E+ I  +NLG NP+  G  + I VP  TEERR  L K A   AE +K
Sbjct: 69  TVQPWEKNMLQPIEKAIMIANLGFNPMNNGDFIIISVPPLTEERRRDLAKQAKGEAEDAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           + +RN R++     K+ R    ASED+  + E DIQ++T+   + I+     K+ EIM
Sbjct: 129 VGIRNARQEAN---KEIRALDDASEDLKKNAEADIQELTNKFSRKIEEVLTVKEAEIM 183


>gi|255559434|ref|XP_002520737.1| ribosome recycling factor, putative [Ricinus communis]
 gi|223540122|gb|EEF41699.1| ribosome recycling factor, putative [Ricinus communis]
          Length = 247

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 97/155 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ K RM  TI  ++ +  ++RTGR +PSMLD ++VE YG+ V L  +A ++  +   L+
Sbjct: 84  KDAKARMEKTIETVRTNFNSIRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLL 143

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  + S+E+ I  S+LGL P  +G+V+R+ +P+ T ERR  + K+    AE+ K+
Sbjct: 144 VQPYDKSSLKSIEKAIVSSDLGLTPNNDGEVIRLSIPQLTSERRKEMSKMVAKLAEEGKV 203

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
           ++RNIRRD +   +K  K  K SED V  L  D+Q
Sbjct: 204 ALRNIRRDALKAYEKLEKEKKLSEDNVKDLSGDLQ 238


>gi|50345004|ref|NP_001002174.1| ribosome-recycling factor, mitochondrial [Danio rerio]
 gi|49256675|gb|AAH74048.1| Mitochondrial ribosome recycling factor [Danio rerio]
          Length = 257

 Score =  120 bits (301), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 5/183 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ +K+ M   ++ LK D     + R SP  LD + V       PLNQ+  +++  P
Sbjct: 77  IISLEEVKEDMAAVLAALKDDFSRNLSVRTSPGALDHITVTTKDGKFPLNQLGQISMKSP 136

Query: 64  RMLVVSV--WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           ++LVV++  + + MVA V R + ES++GLNP VEG ++R+PVP+ T E R  LVK+A  +
Sbjct: 137 QLLVVNMTGFPEAMVA-VTRALRESSMGLNPEVEGTIIRVPVPKVTREHRENLVKLAKQF 195

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           + KSK S+R +R + +  +KKS+ +   S+D +  +E  IQ++TDS   +ID     K K
Sbjct: 196 SNKSKDSLRRVRSNAISQVKKSKDA--VSDDTIHLIEKQIQQMTDSFTADIDKQLATKTK 253

Query: 182 EIM 184
           E++
Sbjct: 254 ELL 256


>gi|269795652|ref|YP_003315107.1| ribosome recycling factor [Sanguibacter keddieii DSM 10542]
 gi|269097837|gb|ACZ22273.1| ribosome recycling factor [Sanguibacter keddieii DSM 10542]
          Length = 185

 Score =  120 bits (301), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 99/179 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M   I   K    ++RTGR + +M   + VE YG+  PL Q+A+    E R +
Sbjct: 6   LLEAEDKMDKAIEVAKNGFASIRTGRANSAMFSRITVEYYGAQTPLQQLASFNTPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +DK  + ++ER + +S+LG+NP  +G V+RI +P  T ERR   VK+A   AE ++
Sbjct: 66  LVVPFDKTALPAIERALRDSDLGVNPSNDGNVIRIVLPVLTAERRKEYVKLAKTQAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVR +RR   D L K  K G A ED     E +++ IT   +  +D     K+ E++ 
Sbjct: 126 VSVRAVRRKAKDTLDKLVKDGDAGEDEGVRAEKELEAITKRHVDVVDQLLASKEAELLE 184


>gi|11277801|pir||T48108 hypothetical protein F16M2.40 - Arabidopsis thaliana
 gi|7523401|emb|CAB86420.1| putative protein [Arabidopsis thaliana]
          Length = 289

 Score =  120 bits (301), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 109/183 (59%), Gaps = 6/183 (3%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K +M  TI  L+    ++RTGR + +MLD ++VE YGS V L  +A ++  +   L++
Sbjct: 106 DVKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLL 165

Query: 69  SVWDKE------MVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
             +DK        + ++E+ I  S+LG+ P  +G V+R+ +P  T +RR  L KV    +
Sbjct: 166 QPYDKSRYMTNGALMAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQS 225

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E+ K+++RNIRRD +    K  K  K SED V  L +D+QK+ D  +K I+  +++K+KE
Sbjct: 226 EEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEKE 285

Query: 183 IMH 185
           +M 
Sbjct: 286 LMK 288


>gi|325110872|ref|YP_004271940.1| ribosome recycling factor [Planctomyces brasiliensis DSM 5305]
 gi|324971140|gb|ADY61918.1| ribosome recycling factor [Planctomyces brasiliensis DSM 5305]
          Length = 186

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 107/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   +S L   +  LRTGR +P ++D ++V+ YGS  PL Q+AN++V EP+ +
Sbjct: 7   LLDCEERMDKAVSVLSDQLKGLRTGRANPGLVDSIRVDYYGSPTPLKQLANISVPEPQQI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   +  + + I  S++GL P  +G+++R+ +P  + ERR  LV     +AE+++
Sbjct: 67  VIRPFDASAINEIVKAIQASDVGLAPNNDGKLVRLNIPPLSTERRKQLVSRVKEFAEEAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD   H  +S K    SED    +++ +Q++T      ++     K+K+IM
Sbjct: 127 VSIRNIRRDANKHADQSEKDKLFSEDERDDVKDKVQELTKKHEGLVNDAAAAKEKDIM 184


>gi|256832239|ref|YP_003160966.1| ribosome recycling factor [Jonesia denitrificans DSM 20603]
 gi|256685770|gb|ACV08663.1| ribosome recycling factor [Jonesia denitrificans DSM 20603]
          Length = 185

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 105/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K++   +RTGR + +M   + V+ YG+  PL Q+A++ + E R +
Sbjct: 6   LLEAEEKMDRAVEVAKEEFAAIRTGRANAAMFSKITVDYYGAPTPLQQLASMNIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  ++ +E+ + +S+LG+NP  +G  +RI +P  TEERR   VK+A    E+ +
Sbjct: 66  LISPYDKSAMSLIEKALRDSDLGVNPSNDGNAIRINLPALTEERRRDYVKLAKNKGEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVRNIRR   D L +  K G+ SED     E +++ +T   +  ID+    K+ E++ 
Sbjct: 126 VSVRNIRRKAKDQLDRLVKDGELSEDEGTRAEKELEALTRRHVDEIDTLLAGKEAELLE 184


>gi|157738471|ref|YP_001491155.1| ribosome recycling factor [Arcobacter butzleri RM4018]
 gi|315635330|ref|ZP_07890598.1| ribosome recycling factor [Arcobacter butzleri JV22]
 gi|226703250|sp|A8EX12|RRF_ARCB4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157700325|gb|ABV68485.1| ribosome releasing factor [Arcobacter butzleri RM4018]
 gi|315480364|gb|EFU71029.1| ribosome recycling factor [Arcobacter butzleri JV22]
          Length = 185

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 107/174 (61%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+ M  +I  LKKD  +LRTG+V+ ++LD +KV+ YG+   L+QV +V   +   + ++ 
Sbjct: 10  KEHMEKSIEALKKDYKSLRTGKVNTNILDGIKVDYYGTMTDLSQVGSVLATDATTITINP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++ ++E+ I  +N+G+NP  +GQ++++  P  T E+R    K A    + +K+++R
Sbjct: 70  WEKNLLGTIEKAIQNANIGVNPNNDGQIIKLFFPPMTVEQRQETAKHAKTMTDNAKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR++  + +K   K    +ED     +++IQKITDS +   D   + K+KEI+
Sbjct: 130 NIRQNSNNKVKTLLKDKAITEDESKKAQDEIQKITDSYVLKADETLKAKEKEIL 183


>gi|302837099|ref|XP_002950109.1| hypothetical protein VOLCADRAFT_80962 [Volvox carteri f.
           nagariensis]
 gi|300264582|gb|EFJ48777.1| hypothetical protein VOLCADRAFT_80962 [Volvox carteri f.
           nagariensis]
          Length = 266

 Score =  120 bits (300), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 107/179 (59%), Gaps = 4/179 (2%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++  +RM   ++ +     T+RTGR +P++LD + V+ +G+  PL Q+  VTV + + L+
Sbjct: 92  KDADERMKKCLNVVADGFNTIRTGRANPAILDKITVDYFGAPTPLKQMGAVTVPDSQTLM 151

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ +D+  +  +ER I ES++G+NP  +G+ +R+ +P  T+ERR  L K      E  K+
Sbjct: 152 IAPFDRSTLKDIERAIQESDIGINPNNDGERIRLVMPPMTQERRKDLAKQVSKMTEDGKV 211

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+R+D M  + K     +  +D   +LE+DIQK+TD  +K +D   + K  E+M  
Sbjct: 212 AVRNVRKDAMKKVDKV----ELPKDDKKALEDDIQKLTDLYVKKLDDMAKAKTDEVMKL 266


>gi|194477329|ref|YP_002049508.1| ribosome releasing factor [Paulinella chromatophora]
 gi|171192336|gb|ACB43298.1| ribosome releasing factor [Paulinella chromatophora]
          Length = 180

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 108/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + +++  M  ++   ++ + T+RTGR +PS+LD + V+ YG+   L  +A V   + + +
Sbjct: 1   MNDLETSMNKSVEATQRTLNTIRTGRANPSLLDKITVDYYGAETSLKSMATVFAPDSQTI 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D + +  +E+ I  S+LGL    +G+++RI +P  T++RR  L K+A  YAE+ K
Sbjct: 61  AIQPFDIKSMGLIEKAIAISDLGLTTSNDGKIIRINIPPLTQDRRKDLCKLAAKYAEEGK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+RRD +D +KK+ K G  SED     +  +Q +TD +I  I+    +K+ EI+
Sbjct: 121 VALRNLRRDAIDKIKKNEKDGSLSEDQSRDQQKAVQNLTDISISQIEKNLSQKEIEII 178


>gi|307106026|gb|EFN54273.1| hypothetical protein CHLNCDRAFT_135841 [Chlorella variabilis]
          Length = 177

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 106/177 (59%), Gaps = 5/177 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K  M   ++ L+ ++  +RTGR +P MLD +KV+ YG  +PL    +V+V +P++L
Sbjct: 1   MTETKSLMERALAHLQGELSNIRTGRATPGMLDHLKVDVYGDRLPLKACGSVSVRDPQLL 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++V+D + V SV + + ES L L+P  EGQ + +P+P  T E   A++KV     E++K
Sbjct: 61  VITVFDVDAVPSVVKAVSESPLRLSPRAEGQEVLVPIPRPTIESLEAMMKVCKVEGEQAK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +SVR+ R+  MD  KK       SED    +E ++QK+TD  ++ ++   + K+K I
Sbjct: 121 VSVRHARKLAMDAAKKL-----GSEDERKRVEREVQKLTDEYVREVEGAVQRKEKSI 172


>gi|119717464|ref|YP_924429.1| ribosome recycling factor [Nocardioides sp. JS614]
 gi|166230809|sp|A1SLQ7|RRF_NOCSJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119538125|gb|ABL82742.1| ribosome recycling factor [Nocardioides sp. JS614]
          Length = 185

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 108/180 (60%), Gaps = 1/180 (0%)

Query: 6   DLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           D+ N  D +M  ++   +++   +R GRV+PSM + + V+ YGS  PL Q+A+ T  E R
Sbjct: 4   DILNEADGKMDKSVEATREEFAAIRAGRVNPSMFNKIVVDYYGSPTPLQQLASFTAPEAR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +++++ +D+  + ++ + I +S+LG+NP  +G+V+R   PE TEERR   +K++   AE+
Sbjct: 64  IILIAPYDQGAMHNILKAIRDSDLGVNPADDGKVIRCVFPELTEERRKEYIKISRHKAEE 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            +++VRN+RR    HL++  K G+  +D +   E  +  +T      ID   + K+ E++
Sbjct: 124 GRVAVRNLRRTAKQHLERLEKDGEVGQDDLTGAEKRLDGLTKKHTDAIDEMLKHKEAELL 183


>gi|205373430|ref|ZP_03226234.1| ribosome recycling factor [Bacillus coahuilensis m4-4]
          Length = 132

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 57/132 (43%), Positives = 90/132 (68%)

Query: 55  VANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLAL 114
           +A+++V E R+LV+  +DK ++  +E+ I  S+LGLNP  +G ++R+ +P  TEERR  L
Sbjct: 1   MASISVPEARLLVIQPYDKSILGEIEKAILRSDLGLNPSNDGSIIRLMIPALTEERRKEL 60

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           VK+    AE +K+++RNIRRD  D LKK  K+G+ +ED +    +D+QK+TD  I+ IDS
Sbjct: 61  VKLVKKEAEDAKVAIRNIRRDTNDDLKKQEKNGEITEDQLRGYSDDVQKLTDKNIEKIDS 120

Query: 175 FFEEKKKEIMHF 186
             ++K+ EIM  
Sbjct: 121 MTKDKENEIMSV 132


>gi|325278093|ref|ZP_08143609.1| ribosome recycling factor [Pseudomonas sp. TJI-51]
 gi|324096770|gb|EGB95100.1| ribosome recycling factor [Pseudomonas sp. TJI-51]
          Length = 133

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/127 (44%), Positives = 85/127 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  L +++  +RTGR  PS+LD V+V A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMTKSLEALARNLAAIRTGRAHPSILDTVRVTAWGSEMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQASAVAEDAKV 126

Query: 128 SVRNIRR 134
           +VRN+RR
Sbjct: 127 AVRNVRR 133


>gi|126642019|ref|YP_001085003.1| ribosome releasing factor [Acinetobacter baumannii ATCC 17978]
          Length = 144

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/142 (44%), Positives = 91/142 (64%), Gaps = 1/142 (0%)

Query: 43  VEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIP 102
           V  YGS VPLNQVANV V + R L+V  +++ MVA++++ I ES+LGLNPI     +R+P
Sbjct: 2   VPYYGSDVPLNQVANVGVEDSRTLIVQPFERTMVAAIDKAIRESDLGLNPIT-ADSIRVP 60

Query: 103 VPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
           +P  TEE R  + K+A + AE +K+++RNIRRD +  +K   K  + SED      +DIQ
Sbjct: 61  LPALTEETRRDMQKIARSEAENAKVAIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQ 120

Query: 163 KITDSTIKNIDSFFEEKKKEIM 184
           KITD  +  +D     K+ E+M
Sbjct: 121 KITDKYVAEVDKRLAAKEAELM 142


>gi|213029166|ref|ZP_03343613.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 136

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/125 (47%), Positives = 84/125 (67%)

Query: 28  LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D+ M  +VE+ I  S+
Sbjct: 8   VRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASD 67

Query: 88  LGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSG 147
           LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+RRD  D +K   K  
Sbjct: 68  LGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDK 127

Query: 148 KASED 152
             SED
Sbjct: 128 AISED 132


>gi|84498386|ref|ZP_00997183.1| ribosome recycling factor [Janibacter sp. HTCC2649]
 gi|84381886|gb|EAP97769.1| ribosome recycling factor [Janibacter sp. HTCC2649]
          Length = 185

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 104/179 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K +   +RTGR  PSM + V V+ YG+  PL Q+A+    E R +
Sbjct: 6   LLEAEEKMDKAVEVAKDNFAAIRTGRAHPSMFNKVIVDYYGAPTPLQQLASFQTPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  + ++E+ + +++LG+NP  +G ++R  +P+ TEERR   +K+A   AE +K
Sbjct: 66  LISPFDKGAMNNIEKALRDADLGVNPSNDGNIIRCILPQLTEERRKEYIKMARGQAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RR   + +++  K G   ED  +  E D++  T   +  ID   + K+ E++ 
Sbjct: 126 VAIRNVRRTAKESIERLVKDGDVGEDEGSRAEKDLESTTKKYVDTIDEVLKGKETELLE 184


>gi|171910236|ref|ZP_02925706.1| ribosome recycling factor [Verrucomicrobium spinosum DSM 4136]
          Length = 188

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/176 (38%), Positives = 110/176 (62%), Gaps = 2/176 (1%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDL--VKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++ M   + +   +   +RTG+ SP++++   + V +YGS++ L Q+A ++  EPR++ +
Sbjct: 11  EENMTKAVEYAIHEFAAVRTGKASPALVENTDIWVNSYGSNMKLKQLAMISTPEPRLIRI 70

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   +  +ERGI+ SNLGLNP VEG+V+R+PVPE + ERR  +VK     AE +++ 
Sbjct: 71  EPFDPSTLKDIERGINASNLGLNPSVEGKVIRLPVPELSTERRQQMVKQVKGMAEDARVR 130

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VR +RR+ M+ LKK  K+G  +ED +   E ++Q  TD  I  ID     K+KEI+
Sbjct: 131 VRAVRRESMEELKKLEKAGTITEDDLHRGEKEVQAFTDKKIAEIDQHVVSKEKEIL 186


>gi|68171353|ref|ZP_00544749.1| Ribosome recycling factor [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999224|gb|EAM85878.1| Ribosome recycling factor [Ehrlichia chaffeensis str. Sapulpa]
          Length = 187

 Score =  118 bits (295), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 109/182 (59%), Gaps = 6/182 (3%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL--EPRM 65
           Q+ K RM  ++S    D+  +RTGR   S+L+ + VE YG  V LN +++V+V   + + 
Sbjct: 7   QDAKSRMEKSLSVYLSDIDGIRTGRARTSVLNGIVVETYGGRVKLNTISSVSVSVSDNKT 66

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L++ VWD   + +++  I  SNLG     E   +R+ VP+ T++ R  LVK+    +E  
Sbjct: 67  LMIKVWDSNNIGAIKTAIMNSNLGFGISCEATTIRLTVPDMTQDMRKNLVKLLGKISEDC 126

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASED--MVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++S+RNIRRD MD LK  + S + SED   VA +E  IQKITD  +K ++  F  K+KE+
Sbjct: 127 RVSIRNIRRDIMDRLKVMQDSKEISEDDLRVAGVE--IQKITDDIMKKVNDAFTSKEKEL 184

Query: 184 MH 185
           +H
Sbjct: 185 LH 186


>gi|312959395|ref|ZP_07773912.1| Ribosome-recycling factor [Pseudomonas fluorescens WH6]
 gi|311286112|gb|EFQ64676.1| Ribosome-recycling factor [Pseudomonas fluorescens WH6]
          Length = 185

 Score =  117 bits (294), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 98/172 (56%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  L      +RTG+  PS+L  V V  YG+  PL+ VANVTV + R L V  ++
Sbjct: 12  RMQKSLESLSHAFGQIRTGKAHPSILGSVMVPYYGTDTPLSGVANVTVKDSRTLQVVAFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M+A+V++ I  + L LNP   G++L I +P  TEE R    K A + AE ++++VRNI
Sbjct: 72  RNMLAAVDKAIQSAGLNLNPTNLGELLLISMPALTEETRKGFTKQARSAAEDARVAVRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  LKK  K  + SED       DI K+T      I    EEK+K++M
Sbjct: 132 RRDALGDLKKLVKDKEISEDEERRAVADIDKLTKDAEAQITKATEEKEKDLM 183


>gi|293400528|ref|ZP_06644673.1| ribosome recycling factor [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305554|gb|EFE46798.1| ribosome recycling factor [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 180

 Score =  117 bits (293), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 98/156 (62%), Gaps = 3/156 (1%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K +M   +  L +++ T+RTG  + S+L+ V  E YGS  P+NQVA++ V+E R L++  
Sbjct: 8   KHKMEKAVEKLDENLKTIRTGVANASLLEHVHFEYYGSETPINQVASIKVVEGRQLMIKP 67

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D+  +  +ER I  S+ GL P  +G+V+R+ VP  TEERR  L K A    E++KI+VR
Sbjct: 68  YDRSTLKDIERAIATSDTGLVPQSDGEVIRLNVPALTEERRKQLSKEADKMGEEAKIAVR 127

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           N+RR+  D +KK +   + +ED    ++  +QK+TD
Sbjct: 128 NVRREANDAIKKDK---ELTEDDAKRMQEKVQKLTD 160


>gi|296123507|ref|YP_003631285.1| ribosome recycling factor [Planctomyces limnophilus DSM 3776]
 gi|296015847|gb|ADG69086.1| ribosome recycling factor [Planctomyces limnophilus DSM 3776]
          Length = 186

 Score =  117 bits (293), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 108/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM      L+  ++ LRTGR + S++D ++VE YGS  P+ Q+A V+V EP+ +
Sbjct: 7   LFDAEERMDKAAQVLQDQLVGLRTGRANASLVDSIRVEYYGSPTPIKQLATVSVPEPQQI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+ +++ + + I  S++GL P  +G+V+R+ VP  + ERR  +V      AE ++
Sbjct: 67  MIKPFDQSILSEIGKAIQASDVGLAPNNDGRVIRLNVPPLSTERRKQIVARVKEMAEDAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD   H   + K    SED+  S +  +Q++T      +++  E K+KE+M 
Sbjct: 127 VAIRNIRRDANKHADTALKDKLMSEDIHESTKESVQELTKKYEGKVNTVAEAKEKEVME 185


>gi|256824967|ref|YP_003148927.1| ribosome recycling factor [Kytococcus sedentarius DSM 20547]
 gi|256688360|gb|ACV06162.1| ribosome recycling factor [Kytococcus sedentarius DSM 20547]
          Length = 186

 Score =  117 bits (293), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 101/178 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + +M   I    +DM  +RTGR    M   + V+ YG+  PL Q+A+  V E R +
Sbjct: 7   LAEAQQKMDKAIEVAHEDMADIRTGRAHAGMFSKIMVDYYGAPTPLQQLASFQVPEARTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +DK  ++++E+ + ES+LG+NP  +G  +R  +P  TEERR   +K+A    E ++
Sbjct: 67  LVQPFDKSAMSAIEKALRESDLGVNPSNDGNQIRCVLPALTEERRKEYIKLAKGKGEDAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRR   +H+ K  K G+  ED  A  E +++ +T      +++  + K+ E++
Sbjct: 127 VSLRNIRRAAKEHIDKLVKDGEIGEDEGARGEKELEALTKKHTDQVETILKAKETELL 184


>gi|320103139|ref|YP_004178730.1| ribosome recycling factor [Isosphaera pallida ATCC 43644]
 gi|319750421|gb|ADV62181.1| ribosome recycling factor [Isosphaera pallida ATCC 43644]
          Length = 186

 Score =  117 bits (292), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 107/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM  ++S L + +  +RTGR +  ++D ++VE YG+  PL Q+AN++  EP+ +
Sbjct: 7   LLDAEERMEKSVSLLSEQLKGVRTGRATTGLVDSIRVEYYGNSTPLKQLANLSTPEPQQI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D++++  + + I  S LGLNP+ + +V+RI VP  + E+R  LV      AE+++
Sbjct: 67  LIRPFDQQILGDIIKAIQASELGLNPVSDNKVIRINVPSLSVEQRKKLVARVKDLAEEAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R+IRRD   H  +S      +ED  A  + +IQ +T      ++   ++K  EI+ 
Sbjct: 127 VSIRSIRRDANKHADQSMTDKILTEDDCAKCKEEIQNLTKKYEGKVNELADKKSAEILE 185


>gi|315604533|ref|ZP_07879596.1| ribosome recycling factor [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313545|gb|EFU61599.1| ribosome recycling factor [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 185

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 99/178 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M   +     +   +RTGR + SM + + V+ YG+  P+ Q+A+  + E R +
Sbjct: 6   LLEAEDKMDKAVDSASHEFANIRTGRATSSMFEQLMVDYYGAPTPMQQLASFQIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D+     + R + ES+LG+NP  +G V+R+ +P  TEERR   VK A + AE  +
Sbjct: 66  LISPFDRTATQEIIRTLRESDLGVNPTDDGNVVRVVLPALTEERRKEYVKQAKSKAEDGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVR +RR   D L + +K G+ SED  A  E  +  +T +    ID     K+ E++
Sbjct: 126 VSVRGVRRKAKDQLDRLKKDGEVSEDDTARAEKSLDAMTKAHTDKIDKMLATKESELL 183


>gi|255071971|ref|XP_002499660.1| ribosome recycling factor [Micromonas sp. RCC299]
 gi|226514922|gb|ACO60918.1| ribosome recycling factor [Micromonas sp. RCC299]
          Length = 299

 Score =  117 bits (292), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 98/180 (54%), Gaps = 4/180 (2%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D    +  M   I  L++D+  LRTGR SP ML+ + V+AYG H PL  + +VT   P+
Sbjct: 122 FDPAAFEQLMESAIEALERDLGKLRTGRASPGMLENLVVQAYGDHTPLQHLGSVTARNPQ 181

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L V ++D  + A+V   I +S LG NP  +G  L +PVPE   + +  + K+A    E 
Sbjct: 182 TLAVMLYDASLKAAVAAAIRDSPLGFNPREDGDTLVVPVPEMNADVKREVAKMAAKAGET 241

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +KISVRN R+ GMD +K++    K  ED     E ++QK  D+ +K        K+K IM
Sbjct: 242 AKISVRNARKKGMDAIKRA----KMPEDEAKRAEKEVQKSHDAFVKRCQDLTVAKEKAIM 297


>gi|229588806|ref|YP_002870925.1| ribosome recycling factor [Pseudomonas fluorescens SBW25]
 gi|259494551|sp|C3K5Z8|RRF_PSEFS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229360672|emb|CAY47530.1| ribosome recycling factor [Pseudomonas fluorescens SBW25]
          Length = 185

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/172 (38%), Positives = 97/172 (56%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  ++  L      +RTG+  PS+L  V V  YGS  P++ VAN+TV + R L V  ++
Sbjct: 12  RMQKSLESLSHAFGQIRTGKAHPSILGSVMVPYYGSDTPISSVANITVKDSRTLQVVAFE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           + M+ +V++ I  + L LNP   G++L I +P  TEE R    K A + AE ++++VRNI
Sbjct: 72  RNMLGAVDKAIQSAGLNLNPTNLGELLLISMPALTEETRKGFTKQARSAAEDARVAVRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RRD +  LKK  K  + SED       DI K+T      I    EEK+K++M
Sbjct: 132 RRDALGDLKKLVKDKEISEDEERRATADIDKLTKDAEAQITKATEEKEKDLM 183


>gi|303273418|ref|XP_003056070.1| ribosomal recycling factor, chloroplast precursor [Micromonas
           pusilla CCMP1545]
 gi|226462154|gb|EEH59446.1| ribosomal recycling factor, chloroplast precursor [Micromonas
           pusilla CCMP1545]
          Length = 245

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 106/176 (60%), Gaps = 3/176 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+  DRM  ++  ++ ++ T+RTGR + ++LD ++VE YGS  PL  +AN+T  + + ++
Sbjct: 70  QSADDRMEKSVDSIRNNLNTVRTGRANAAILDRIEVEYYGSVTPLKSLANITTPDAQTII 129

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK ++  VE+ I  S+L L P  +G  +R+ +P  T ERR  L K+     E  K+
Sbjct: 130 IQPFDKNIIDDVEKAIMSSDLDLMPGNDGNCIRLNIPPLTAERRRDLAKLVSKLGEDGKV 189

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++RN+RRD +  + K +     SED + SLEN+++K+T     ++D    +K+ EI
Sbjct: 190 ALRNVRRDTLRSIGKLKGY---SEDEIKSLENNVEKMTLKHTTDVDEVVRKKEDEI 242


>gi|293189848|ref|ZP_06608562.1| ribosome recycling factor [Actinomyces odontolyticus F0309]
 gi|292821263|gb|EFF80208.1| ribosome recycling factor [Actinomyces odontolyticus F0309]
          Length = 185

 Score =  116 bits (291), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 101/178 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +     +   +RTGR + SM + + V+ YG+  P+ Q+A+  + E R +
Sbjct: 6   LLEAEEKMDKAVEAASHEFSNIRTGRATSSMFEQLLVDYYGAPTPMQQLASFQIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D+     + R + ES+LG+NP  +G V+R+ +P  TEERR   VK A + AE  +
Sbjct: 66  LISPFDRTATQEIIRTLRESDLGVNPTDDGNVVRVVLPALTEERRKEYVKQAKSKAEDGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVR +RR   D L + +K G+ASED V   E  +  +T +  + ID     K+ E++
Sbjct: 126 VSVRGVRRKAKDQLDRLKKDGEASEDDVERAEKQLDGLTKAHTEQIDKMLATKESELL 183


>gi|78778261|ref|YP_394576.1| ribosome recycling factor [Sulfurimonas denitrificans DSM 1251]
 gi|123549529|sp|Q30NU0|RRF_SULDN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78498801|gb|ABB45341.1| ribosome recycling factor [Sulfurimonas denitrificans DSM 1251]
          Length = 185

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 105/172 (61%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +++ + +D  TLRTG+V+ S+LD VK++ YG+   L+QV ++ V +   ++++ W+
Sbjct: 12  KMKSSVNHMLRDFKTLRTGKVTTSVLDNVKIDYYGTLTALDQVGSILVADATTIIINPWE 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  ++  I ++N+G  P  +G  +++  P  T E+R   VK      E +K++VRN 
Sbjct: 72  KNLLNIIDSAISKANIGATPNNDGSQIKLFFPAMTVEQRQESVKQMKGMGEHAKVAVRND 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R++  D +KKS K  + + D   S +++IQKITD  I  IDS  + K+ EI+
Sbjct: 132 RKNANDKIKKSEKDKEITADESKSAQDNIQKITDKYISEIDSILKTKEAEIL 183


>gi|170781205|ref|YP_001709537.1| ribosome recycling factor [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|190360238|sp|B0REP7|RRF_CLAMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169155773|emb|CAQ00894.1| ribosome recycling factor [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 185

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 108/183 (59%), Gaps = 9/183 (4%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRMG  +  +K+D  ++RTGR +P++   V VE YGS  PL Q+A++   E R L
Sbjct: 7   LADARDRMGKAVEAVKEDFGSVRTGRANPALFQKVMVEYYGSPTPLGQLASMNNPEARTL 66

Query: 67  VVSVWDKEMVASVERG-IHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+ +DK  +  +E+  ++  NL      +G+++R  +PE TE+RR   VK+    AE+ 
Sbjct: 67  IVTPYDKTALKEIEKALVNVPNLSATVGNDGEMVRFTLPELTEDRRKEFVKIVRGKAEEG 126

Query: 126 KISVRNIRR---DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           ++SVRNIRR   D +D LK     G+  +D VA +E +++ +T +    +D   + K+ E
Sbjct: 127 RVSVRNIRRRSKDELDALK-----GEVGDDEVARVEKELEALTKTHTDQVDDALKRKETE 181

Query: 183 IMH 185
           ++ 
Sbjct: 182 LLE 184


>gi|77457331|ref|YP_346836.1| ribosome recycling factor [Pseudomonas fluorescens Pf0-1]
 gi|123605788|sp|Q3KHA9|RRF_PSEPF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|77381334|gb|ABA72847.1| ribosome recycling factor [Pseudomonas fluorescens Pf0-1]
          Length = 185

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 101/177 (57%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ K+RM  ++  L  +   +RTG+  PS+L+ V V  YG+  P+ QVAN+TV + R L 
Sbjct: 7   KDAKERMTKSVESLAHNFGRIRTGQAHPSILEGVMVPYYGADTPIKQVANITVKDARTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+ +V++ I  + L LNP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLGAVDKAIGSAGLNLNPTNLGELLLISMPALTEETRRGFTKQARDVAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD    LK   K  + SED       +I  +T   +  ID+   EK+K++M
Sbjct: 127 AVRNIRRDANSSLKDLVKEKEISEDEERRAAGEIDDLTKKFVAEIDAKLAEKEKDLM 183


>gi|328955482|ref|YP_004372815.1| ribosome recycling factor [Coriobacterium glomerans PW2]
 gi|328455806|gb|AEB07000.1| ribosome recycling factor [Coriobacterium glomerans PW2]
          Length = 178

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 99/178 (55%), Gaps = 3/178 (1%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           +I  +M  T++ LK +   +RTGR +  +L  + ++ YG   P+ QVA V V E  +LV+
Sbjct: 4   DISAQMDKTLASLKHNFSKVRTGRANAGILSDISIDYYGVPTPITQVAAVKVPEAHLLVI 63

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WD+ +  ++ + I  S+LG+ P  +G V+R+P P  TEERR  LVK  H  AE +++S
Sbjct: 64  EPWDRGITDAIVKAIAASDLGITPNSDGSVVRLPFPAPTEERRRELVKECHELAEHARVS 123

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +R IRR+       + +    +ED V   +  IQK TD  +  ID   + K+ E+M  
Sbjct: 124 IRGIRREAN---GAAERDENLTEDDVRRDQARIQKRTDEYVAKIDQMLKAKEAEVMEI 178


>gi|257894708|ref|ZP_05674361.1| ribosome recycling factor [Enterococcus faecium 1,231,408]
 gi|257831087|gb|EEV57694.1| ribosome recycling factor [Enterococcus faecium 1,231,408]
          Length = 155

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 90/135 (66%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M      L++++  +R GR + S+LD + V  YG+  PLNQ+A++ + E R+L+++ 
Sbjct: 10  KEKMKKAAQNLQRELGQIRAGRANASLLDRITVNYYGAPTPLNQMASIQIPEARVLMITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  VE+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE +KI++R
Sbjct: 70  FDKSILQDVEKAIMASDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENAKIAIR 129

Query: 131 NIRRDGMDHLKKSRK 145
           NIRRD +D  KK +K
Sbjct: 130 NIRRDAIDEYKKQQK 144


>gi|254457533|ref|ZP_05070961.1| ribosome recycling factor [Campylobacterales bacterium GD 1]
 gi|207086325|gb|EDZ63609.1| ribosome recycling factor [Campylobacterales bacterium GD 1]
          Length = 185

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 110/184 (59%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ D    + +M  +I  +++D  TLRTG+++ S+LD V+++ YG+   L+QV ++  
Sbjct: 2   LNEIYDA--CEKKMKSSIEHMQRDFKTLRTGKITTSVLDNVRIDYYGTMTSLDQVGSIIA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   +VV+ W+K ++ ++E  I ++N+G NP  +G  +++  P  T E+R   VK    
Sbjct: 60  TDATTIVVNPWEKNLLPAIESAISKANVGANPNNDGDQIKLFFPAMTVEQRKESVKQMKG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RN R++  D +KK  K  + + D   S +++IQKITD    N +   ++K+
Sbjct: 120 MGENAKVSLRNDRKNANDQIKKLEKDKEITADESKSAQDNIQKITDKFSANTEQILKDKE 179

Query: 181 KEIM 184
            EI+
Sbjct: 180 AEIL 183


>gi|168031675|ref|XP_001768346.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680524|gb|EDQ66960.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 192

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 99/171 (57%), Gaps = 4/171 (2%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   ++ L  ++  LRTGR +P MLD V V ++G   PL+ VA V+V     L V  +D 
Sbjct: 23  MEAALNALSVELSKLRTGRATPGMLDHVNVMSHGVQTPLSHVAAVSVSNLETLTVMPYDT 82

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            MV  VE+ I  S L LNP+ EG+VLR+P+P+ T+E    + K+     E +K+SVR  R
Sbjct: 83  SMVKEVEKAIRNSPLKLNPMAEGEVLRVPIPKLTKEHIQTMSKLVGKAGETAKLSVRRAR 142

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +D MD + K    G  S+D V   E +++ +T   +K+++   + K+KEI+
Sbjct: 143 KDAMDIISK----GGYSKDEVKRFEKEVEDVTKKYVKSVEEACKSKEKEIL 189


>gi|139439763|ref|ZP_01773154.1| Hypothetical protein COLAER_02185 [Collinsella aerofaciens ATCC
           25986]
 gi|133774913|gb|EBA38733.1| Hypothetical protein COLAER_02185 [Collinsella aerofaciens ATCC
           25986]
          Length = 178

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 97/165 (58%), Gaps = 3/165 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +NI   M  ++  LK +   +RTGR + ++L  + V+ YG   P+ QVA V   E  ML+
Sbjct: 3   ENITAHMDKSLESLKHNFSKVRTGRANANILSDITVDYYGVPTPVTQVAAVKTPEAHMLL 62

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK ++ ++ + I  S+LG+ P  +G V+R+P P  TEERR  LVK    YAE++K+
Sbjct: 63  IEPWDKALINAIVKAIGASDLGITPNSDGTVVRLPFPAPTEERRRELVKECREYAEQAKV 122

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
           S+RNIRRD  + L++     + +ED V   +  +QK TD  +  +
Sbjct: 123 SIRNIRRDFNNKLERDE---ELTEDDVRREQAKVQKHTDEYVAKV 164


>gi|154509155|ref|ZP_02044797.1| hypothetical protein ACTODO_01676 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798789|gb|EDN81209.1| hypothetical protein ACTODO_01676 [Actinomyces odontolyticus ATCC
           17982]
          Length = 185

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 101/178 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +     +   +RTGR + +M + + V+ YG+  P+ Q+A+  + E R +
Sbjct: 6   LLEAEEKMDKAVEAASHEFSNIRTGRATSAMFEQLLVDYYGAPTPMQQLASFQIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D+     + R + ES+LG+NP  +G V+R+ +P  TEERR   VK A + AE  +
Sbjct: 66  LISPFDRTATQEIIRTLRESDLGVNPTDDGNVVRVVLPALTEERRKEYVKQAKSKAEDGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVR +RR   D L + +K G+ASED V   E  +  +T +  + ID     K+ E++
Sbjct: 126 VSVRGVRRKAKDQLDRLKKDGEASEDDVERAEKQLDGLTKAHTEQIDKMLATKESELL 183


>gi|32472787|ref|NP_865781.1| ribosome recycling factor [Rhodopirellula baltica SH 1]
 gi|32444024|emb|CAD73466.1| Ribosome recycling factor [Rhodopirellula baltica SH 1]
          Length = 200

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   +S L+ ++  +RTGR +P ++D +KVE YGS  PL Q+A++   EP+ +
Sbjct: 21  LMDAEERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQI 80

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +  +E+ I   +LGLNP  +G+V+R+ VP  + E R  +V      AE++K
Sbjct: 81  LIRPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAK 140

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RNIRRD     + + K  + +ED     ++ +Q++T     N++   + ++ E+M 
Sbjct: 141 VSIRNIRRDANKAAETAEKDKEMTEDDRDKTKDQVQELTKKAETNVNESAKAREAEVME 199


>gi|39932075|sp|Q7UTH0|RRF_RHOBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 186

 Score =  115 bits (288), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   +S L+ ++  +RTGR +P ++D +KVE YGS  PL Q+A++   EP+ +
Sbjct: 7   LMDAEERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +  +E+ I   +LGLNP  +G+V+R+ VP  + E R  +V      AE++K
Sbjct: 67  LIRPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RNIRRD     + + K  + +ED     ++ +Q++T     N++   + ++ E+M 
Sbjct: 127 VSIRNIRRDANKAAETAEKDKEMTEDDRDKTKDQVQELTKKAETNVNESAKAREAEVME 185


>gi|323359725|ref|YP_004226121.1| ribosome recycling factor [Microbacterium testaceum StLB037]
 gi|323276096|dbj|BAJ76241.1| ribosome recycling factor [Microbacterium testaceum StLB037]
          Length = 184

 Score =  115 bits (287), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 9/177 (5%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K+D  T+RTGR +P M   V V+ YGS  PL Q+A++   E R LV++ +D
Sbjct: 12  RMDRAVEAAKEDFATVRTGRANPQMFQKVLVDYYGSPTPLAQLASLNNPEARTLVINPYD 71

Query: 73  KEMVASVERGIHE-SNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           K  + ++E+ I +  NLG+NP  +G ++RI +PE TEERR   VK+     E +K+ +RN
Sbjct: 72  KSALKAIEQAIRDMPNLGVNPTNDGNIVRITMPELTEERRKEYVKLVRGKGEDAKVQIRN 131

Query: 132 IRR---DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RR   D +D LK         ED +   E ++  +T + +  ID   + K+ E++ 
Sbjct: 132 LRRKAKDDLDALKSD-----VGEDELVRAEKELDGVTRAHVDQIDEALKRKEAELLE 183


>gi|148272566|ref|YP_001222127.1| ribosome recycling factor [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|190360237|sp|A5CQS7|RRF_CLAM3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|147830496|emb|CAN01431.1| frrA [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 185

 Score =  115 bits (287), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 108/183 (59%), Gaps = 9/183 (4%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRMG  +  +K+D  ++RTGR +P++   V VE YGS  PL Q+A++   E R L
Sbjct: 7   LADARDRMGKAVEAVKEDFGSVRTGRANPALFQKVMVEYYGSPTPLGQLASMNNPEARTL 66

Query: 67  VVSVWDKEMVASVERG-IHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+ +DK  +  +E+  ++  NL      +G+++R+ +PE TE+RR   VK+    AE+ 
Sbjct: 67  IVTPYDKTALKEIEKALVNVPNLSATVGNDGEMVRLTLPELTEDRRKEFVKIVRGKAEEG 126

Query: 126 KISVRNIRR---DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           ++SVRNIRR   D +D LK     G+  +D VA  E +++ +T +    +D   + K+ E
Sbjct: 127 RVSVRNIRRRSKDELDALK-----GEVGDDEVARGEKELESLTKTHTDQVDDALKRKETE 181

Query: 183 IMH 185
           ++ 
Sbjct: 182 LLE 184


>gi|283778745|ref|YP_003369500.1| ribosome recycling factor [Pirellula staleyi DSM 6068]
 gi|283437198|gb|ADB15640.1| ribosome recycling factor [Pirellula staleyi DSM 6068]
          Length = 186

 Score =  114 bits (286), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 100/178 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++++RM   IS LK  +  +RTGR +P ++D ++VE YGS  P+  +A+V   EP+ +
Sbjct: 7   LFDVEERMEKAISVLKGQLAGIRTGRANPGLVDSLRVEVYGSPTPMKSLASVGAPEPQQI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   +  +E+ I  S LG  P  +G+V+R+ VP  T E R  LV       E++K
Sbjct: 67  VIRPYDASTIKDIEKAIIASGLGFAPQNDGRVIRLNVPPLTTETRRKLVARIKELTEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN+RRDG    ++  K    SED    ++ D+Q++T           + ++ E+M
Sbjct: 127 VSIRNVRRDGNKAAEQEEKDKLLSEDECKKVKEDVQELTKKYENTAGEMAKHREAEVM 184


>gi|315655036|ref|ZP_07907940.1| ribosome recycling factor [Mobiluncus curtisii ATCC 51333]
 gi|315490692|gb|EFU80313.1| ribosome recycling factor [Mobiluncus curtisii ATCC 51333]
          Length = 185

 Score =  114 bits (285), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 99/178 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ K  M   +S  + +  ++RTGR + +M D + V+ YG+  PL Q+A+  + E R +
Sbjct: 6   LKSAKTMMAKALSATQDEFASIRTGRANTAMFDGIMVDYYGAPTPLKQLASFNIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +DK     + R I E++LG+NP  +G+ +RI +P  TEERR   VK+A   AE+ +
Sbjct: 66  IVQPFDKSASQDIIRAIAEADLGVNPTDDGKTIRIVLPALTEERRKEYVKIAKTKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            SVR++RR   D  +   K+ +  ED +   E ++  IT      ID     K+ E+M
Sbjct: 126 QSVRSLRRKAKDEFEAMLKNKELGEDEIKRGEKELDSITKKFTDEIDQLLAAKESELM 183


>gi|327541582|gb|EGF28113.1| ribosome recycling factor [Rhodopirellula baltica WH47]
          Length = 179

 Score =  114 bits (285), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 105/177 (59%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + ++RM   +S L+ ++  +RTGR +P ++D +KVE YGS  PL Q+A++   EP+ +++
Sbjct: 2   DAEERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQILI 61

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   +  +E+ I   +LGLNP  +G+V+R+ VP  + E R  +V      AE++K+S
Sbjct: 62  RPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAKVS 121

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD     + + K  + +ED     ++ +Q++T     N++   + ++ E+M 
Sbjct: 122 IRNIRRDANKAAETAEKDKEMTEDDRDKTKDQVQELTKKAETNVNESAKAREAEVME 178


>gi|308176749|ref|YP_003916155.1| ribosome-recycling factor [Arthrobacter arilaitensis Re117]
 gi|307744212|emb|CBT75184.1| ribosome-recycling factor [Arthrobacter arilaitensis Re117]
          Length = 185

 Score =  114 bits (285), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 99/179 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  TI   K+D  T+RTGR  P M   V V+ YGS  PL Q+A+  V E R +
Sbjct: 6   LAETAEKMERTIDAAKEDFATIRTGRAHPGMYSKVMVDYYGSPTPLQQLASFAVPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ +D   +  +E+ + +  +G NP  +G+++R+ +P  TEERR   VK+A A  E ++
Sbjct: 66  TITPFDVTALREIEKALGDPEVGANPSSDGKMIRVVLPVLTEERRKEYVKLAKAKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN RR   D + K  K G+  ED     E D+  +T   + ++D   + K+ E++ 
Sbjct: 126 VALRNHRRKAKDTIDKLVKDGEIGEDEGTRAEKDLDALTKKHVDSVDEILKNKEAELLE 184


>gi|87310510|ref|ZP_01092639.1| Ribosome recycling factor [Blastopirellula marina DSM 3645]
 gi|87286731|gb|EAQ78636.1| Ribosome recycling factor [Blastopirellula marina DSM 3645]
          Length = 186

 Score =  114 bits (284), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 106/175 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +DRM   I  LK ++  +RTGR +P ++D ++VE YGS  P+ Q+A+V+V EP  L++  
Sbjct: 11  EDRMEKAIEHLKHNLSGIRTGRANPGLVDSLRVEVYGSLQPIKQIASVSVPEPTQLLIRP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D   +  +E+ I  S+LG+ P  +G+V+R+ VP  + E R  LV      +E++K+S+R
Sbjct: 71  YDTGAIKDIEKAIVASDLGMAPQSDGRVIRLNVPALSTEVRKKLVSRIKELSEEAKVSIR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           N+RRD     + + K+ +  ED+   ++N++Q++T    + +    + ++ E+M 
Sbjct: 131 NVRRDSNKSAETAEKNKEIGEDIRDDIKNEVQELTKKFEEKVAELAKTRETEVME 185


>gi|255071027|ref|XP_002507595.1| ribosomal recyclingfactor [Micromonas sp. RCC299]
 gi|226522870|gb|ACO68853.1| ribosomal recyclingfactor [Micromonas sp. RCC299]
          Length = 170

 Score =  114 bits (284), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 98/172 (56%), Gaps = 3/172 (1%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  TI  +++   T+RTGR SP +L+ + V+ YG+  PL  +AN +  + + +V+  +D+
Sbjct: 1   MEKTIETVREKFNTVRTGRASPKILNRINVDYYGTLAPLITIANASTPDSQTIVIQPFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +ER I  S+LGLNP  +G  +R+ +P  T ERR  L K+     E+ K+++RN+R
Sbjct: 61  TIINDIERAIMLSDLGLNPSNDGACIRLSIPPLTAERRQELAKLVSKLGEEGKVALRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RD M  + K       SED V SLE  I  +T   ++ +    +EK+ +I  
Sbjct: 121 RDAMKSIGKVE---GVSEDDVKSLEEAIDTLTSDFVRKVGELVKEKEDDIFK 169


>gi|168705204|ref|ZP_02737481.1| Ribosome recycling factor [Gemmata obscuriglobus UQM 2246]
          Length = 186

 Score =  114 bits (284), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 101/179 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +DRM   +   + D+  +RTGR SP MLD ++V+ YG+  P+  VA+VT  +   +
Sbjct: 7   LKDTEDRMEKALDVFRNDLKGMRTGRASPQMLDSLRVDNYGTMSPIRDVASVTCPDAATI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +  E +  +E+ I  S+LGL P  +G+V+R+ +P  + ++R  +V      AE +K
Sbjct: 67  VIKPYAAESLKEIEKAIRSSDLGLAPNNDGKVIRLTMPAMSGDQRKKIVAAVKKSAESAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S RNIRRDG  H + + K+   +ED     +  +Q +       ID    +K+KE++ 
Sbjct: 127 VSCRNIRRDGNKHFEDAEKAKTMTEDDRDKGKAKVQDLLKVYEGKIDDLANKKEKEVLE 185


>gi|313683630|ref|YP_004061368.1| ribosome recycling factor [Sulfuricurvum kujiense DSM 16994]
 gi|313156490|gb|ADR35168.1| ribosome recycling factor [Sulfuricurvum kujiense DSM 16994]
          Length = 185

 Score =  113 bits (283), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 101/177 (57%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  +++M  +   +  +  TLRTGRV+  +LD V+VE YGS VPL+Q A+V   +   + 
Sbjct: 7   QFCEEKMQGSCDHMIHNFRTLRTGRVTTKILDNVRVENYGSMVPLDQAASVLATDATTIT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S WDK M++ +E+ I ++++G+NP   G  +++  P  T E+R    K A   AE +K+
Sbjct: 67  ISPWDKSMLSVIEKAIQKADIGVNPNNNGTDIKLFFPPMTVEQRQETAKKAKGMAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            VRN R+   D +K   K    + D     ++ +QKITD  I  I+   + K+++I+
Sbjct: 127 GVRNDRKKANDKIKVLEKDKLITADESKGAQDKVQKITDKYISKIEDLLKAKEQDIL 183


>gi|298346466|ref|YP_003719153.1| ribosome recycling factor [Mobiluncus curtisii ATCC 43063]
 gi|304389795|ref|ZP_07371754.1| ribosome recycling factor [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315657102|ref|ZP_07909986.1| ribosome recycling factor [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|298236527|gb|ADI67659.1| ribosome recycling factor [Mobiluncus curtisii ATCC 43063]
 gi|304326971|gb|EFL94210.1| ribosome recycling factor [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315492205|gb|EFU81812.1| ribosome recycling factor [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 185

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 99/178 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ K  M   +S  + +  ++RTGR + +M D + V+ YG+  PL Q+A+  + E R +
Sbjct: 6   LKSAKTMMTKALSATQDEFASIRTGRANTAMFDGIMVDYYGAPTPLKQLASFNIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +DK     + R I E++LG+NP  +G+ +RI +P  TEERR   VK+A   AE+ +
Sbjct: 66  IVQPFDKSASQDIIRAIAEADLGVNPTDDGKTIRIVLPALTEERRKEYVKIAKTKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            SVR++RR   D  +   K+ +  ED +   E ++  IT      ID     K+ E+M
Sbjct: 126 QSVRSLRRKAKDEFEAMLKNKELGEDEIKRGEKELDSITKKFTDEIDQLLAAKESELM 183


>gi|330807784|ref|YP_004352246.1| ribosome recycling factor [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375892|gb|AEA67242.1| ribosome recycling factor [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 185

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 100/177 (56%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L  +   +RTG+  PS+L+ V V  YGS  P+ QVAN+TV + R L 
Sbjct: 7   KDAEQRMQKSLESLAHNFGRIRTGQAHPSILEGVMVPYYGSDTPIKQVANITVKDARTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+ +V++ I  + L LNP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLGAVDKAIGSAGLNLNPTNLGELLLISMPALTEETRKGFTKQARDVAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD    LK   K  + SED       +I  +T   +  ID+   +K+K++M
Sbjct: 127 AVRNIRRDANSQLKDLVKEKEISEDEERRATGEIDDLTKKYVAKIDADLAQKEKDLM 183


>gi|116515085|ref|YP_802714.1| hypothetical protein BCc_145 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285519|sp|Q057S8|RRF_BUCCC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116256939|gb|ABJ90621.1| ribosome recycling factor [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 185

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 102/172 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K D+  +R  R +P +LD + ++ YG+H  L++++N+ +     L +S++D
Sbjct: 12  KMNKCVLNFKNDLNKIRANRATPELLDNIFIDYYGTHTALSKLSNIIIENNSTLKISLFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             +  SVE+ I  SNLGLNPI     +RI +P  TE+RR  +VK+    AE ++IS+RNI
Sbjct: 72  ISIKNSVEKSIINSNLGLNPISSDSNIRIKIPALTEQRRKDIVKIIKNDAENTRISIRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR+    +K   K  + ++D+   ++ +IQ+ T+  IK I+     K+KE++
Sbjct: 132 RREANIQIKTLLKEKEINQDIEKQVKLEIQRYTNLFIKKINDILSIKEKELL 183


>gi|116787688|gb|ABK24606.1| unknown [Picea sitchensis]
          Length = 269

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 101/172 (58%), Gaps = 2/172 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   I  L +++  LRTGR S  MLD + +E+ G   PL+++A ++VL+ + L V+ +D
Sbjct: 98  QMQAGIDALSRELSKLRTGRASAGMLDHIIIESDGVRTPLSRIAAISVLDSQTLSVTPYD 157

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            E +  VER I  S LGLNP +EGQ L +P+P  T+E   A+ K+    +E  K S+R  
Sbjct: 158 LEAIKDVERAIVSSPLGLNPTLEGQRLVVPIPALTKEHTQAMSKLVSKASEDVKQSIRRA 217

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R+  +D +KK+  S   S+D V  LE +I  +T   +K  +   + K+KEIM
Sbjct: 218 RQKALDSIKKAVSS--MSKDDVKRLEKEIDDLTKKFVKTAEDMCKAKEKEIM 267


>gi|330968958|gb|EGH69024.1| ribosome recycling factor [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 161

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 90/155 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
           +VRNIRRD +  LK   K  + SED      +D+Q
Sbjct: 127 AVRNIRRDALSQLKDLVKEKEISEDEERRAADDVQ 161


>gi|91201172|emb|CAJ74232.1| similar to ribosome recycling factor (ribosome releasing factor)
           (RRF) [Candidatus Kuenenia stuttgartiensis]
          Length = 186

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 103/174 (59%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K +M   I+ L+ D+  +RTGR S  +++ ++VE YG+  PL Q+A ++  + + +++  
Sbjct: 11  KAKMEKVIAHLQDDLKGIRTGRASTGLVENIRVEYYGNPSPLKQLAVISTPDAQSILIKP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D  +V+++E+ I +S++GLNP VE + LRI +P   EERR  L      + E +K+S+R
Sbjct: 71  YDTTIVSNIEKAIIQSDIGLNPSVEAKTLRIVIPPLNEERRKKLSVTVKDFGESTKVSLR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           NIR+D      K +K    +ED V   +++IQKI       ++   + K +EI+
Sbjct: 131 NIRQDSNKQADKEKKENILTEDDVKRTKDEIQKIIKDFETKVNDLIKRKTEEIL 184


>gi|209554340|ref|YP_002284960.1| ribosome recycling factor [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|226749944|sp|B5ZC20|RRF_UREU1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|209541841|gb|ACI60070.1| ribosome recycling factor [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
          Length = 183

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 105/184 (57%), Gaps = 3/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN  I    I++     + ++  + + LRTGR +P++LD + V+ YGS  P+NQ+AN++V
Sbjct: 1   MNFKIYETKIREEFELVLKWMHNEFIKLRTGRATPAILDGILVDYYGSMTPINQLANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L +  +D+  +  V   I+ SNLG+NP V+  ++R+     TEE R  L K A  
Sbjct: 61  PEPRVLAIKPYDRSSIKDVASAINASNLGVNPQVDVDIIRLTFAAPTEEVRKNLAKKAKQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++KI VR+IR++  D  KK+  +    ED     + ++  +T    K I++    K+
Sbjct: 121 VGEEAKIRVRHIRQEAQDLFKKNSST---VEDDKKFFQTELDNLTKELNKEIEAVVSHKE 177

Query: 181 KEIM 184
           K+IM
Sbjct: 178 KDIM 181


>gi|327399655|ref|YP_004340524.1| Ribosome-recycling factor [Hippea maritima DSM 10411]
 gi|327182284|gb|AEA34465.1| Ribosome-recycling factor [Hippea maritima DSM 10411]
          Length = 188

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 107/188 (56%), Gaps = 2/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M + +D  +  +KD M  T+S  KK + T++TGR   S+ + +KVE+YG  + L Q+A +
Sbjct: 1   MEESVDKVITQMKDEMKKTLSSYKKYLTTVKTGRAHVSVFEGIKVESYGQQMQLKQLATI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +  +   +V+  WD  ++  +E+ I ++N+G  P  +G++++I +P  TEE R  +VK+ 
Sbjct: 61  STPDAMTVVIQPWDVSIIKEIEKAILKANMGFTPQNDGKIIKINIPPMTEEDRKKVVKLL 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              +E  K+++RN R+  +  +K   K    SED     E +++K  D + K +D     
Sbjct: 121 KQESENYKVALRNARKKALKTIKDLEKEKIISEDESKRAEKEVKKALDDSSKKLDELMSN 180

Query: 179 KKKEIMHF 186
           K+KEI++ 
Sbjct: 181 KEKEILNL 188


>gi|300743956|ref|ZP_07072976.1| ribosome recycling factor [Rothia dentocariosa M567]
 gi|311113206|ref|YP_003984428.1| ribosome recycling factor [Rothia dentocariosa ATCC 17931]
 gi|300380317|gb|EFJ76880.1| ribosome recycling factor [Rothia dentocariosa M567]
 gi|310944700|gb|ADP40994.1| ribosome recycling factor [Rothia dentocariosa ATCC 17931]
          Length = 185

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 103/178 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  TI  +K +   +RTGRV+P++   +  + YG+  PL Q+ +  V + R +
Sbjct: 6   LAEAGEKMDKTIEAIKTEFAKVRTGRVNPAIFSSITADYYGAPTPLQQLVSFNVEDARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D   +A++E+ + +S+LG+NP  +G  +R+ +PE T ERR   +K+ +  AE+++
Sbjct: 66  KIVPFDVSALAAIEKAVRDSDLGVNPSNDGAAIRVVMPEMTSERRKEYIKLVNHKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN+RR     + K  K G+  ED  A  E ++  +T   +  ID  ++ K+ E++
Sbjct: 126 VSVRNVRRHAKTVIDKLVKDGEIGEDDGARAEKELDALTKKHVDTIDELYKHKESELL 183


>gi|171920233|ref|ZP_02690622.2| ribosome recycling factor [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|171902628|gb|EDT48917.1| ribosome recycling factor [Ureaplasma parvum serovar 1 str. ATCC
           27813]
          Length = 183

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 3/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN  I    I++     + ++  + + LRTGR +P++LD + V  YGS +P+NQ+AN++V
Sbjct: 1   MNFKIYETKIREEFELVLKWMHNEFIKLRTGRATPTILDGILVNYYGSMMPINQLANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L +  +D+  +  +   I+ SNLG+NP V+  ++R+     TEE R  LVK A  
Sbjct: 61  PEPRVLAIKPYDRSSIKDIATAINASNLGVNPQVDVDIIRLTFAAPTEEVRKNLVKKAKQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++KI VR+IR++  D  K   K     ED     + ++  +T    K I++    K+
Sbjct: 121 VGEEAKIRVRHIRQEAQDLFK---KDSTTIEDDKKFFQTELDNLTKELNKEIETVVSHKE 177

Query: 181 KEIM 184
           K+IM
Sbjct: 178 KDIM 181


>gi|13358076|ref|NP_078350.1| ribosome releasing factor [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762287|ref|YP_001752597.1| ribosome recycling factor [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|183508475|ref|ZP_02689468.2| ribosome recycling factor [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701607|ref|ZP_02553656.2| ribosome recycling factor [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|22001956|sp|Q9PPX7|RRF_UREPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044082|sp|B1AJF3|RRF_UREP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|11277798|pir||F82882 ribosome releasing factor frr UU512 [similarity] - Ureaplasma
           urealyticum
 gi|6899513|gb|AAF30925.1|AE002149_10 ribosome releasing factor [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827864|gb|ACA33126.1| ribosome recycling factor [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|182675892|gb|EDT87797.1| ribosome recycling factor [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700837|gb|EDU19119.1| ribosome recycling factor [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 183

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 3/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN  I    I++     + ++  + + LRTGR +P++LD + V  YGS +P+NQ+AN++V
Sbjct: 1   MNFKIYETKIREEFELVLKWMHNEFIKLRTGRATPAILDGILVNYYGSMMPINQLANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L +  +D+  +  +   I+ SNLG+NP V+  ++R+     TEE R  LVK A  
Sbjct: 61  PEPRVLAIKPYDRSSIKDIATAINASNLGVNPQVDVDIIRLTFAAPTEEVRKNLVKKAKQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++KI VR+IR++  D  K   K     ED     + ++  +T    K I++    K+
Sbjct: 121 VGEEAKIRVRHIRQEAQDLFK---KDSTTIEDDKKFFQTELDNLTKELNKEIETVVSHKE 177

Query: 181 KEIM 184
           K+IM
Sbjct: 178 KDIM 181


>gi|269977913|ref|ZP_06184867.1| ribosome recycling factor [Mobiluncus mulieris 28-1]
 gi|306819219|ref|ZP_07452930.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35239]
 gi|307700228|ref|ZP_07637269.1| ribosome recycling factor [Mobiluncus mulieris FB024-16]
 gi|269933879|gb|EEZ90459.1| ribosome recycling factor [Mobiluncus mulieris 28-1]
 gi|304648001|gb|EFM45315.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35239]
 gi|307614610|gb|EFN93838.1| ribosome recycling factor [Mobiluncus mulieris FB024-16]
          Length = 185

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 6/181 (3%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ K +M   +   K +  T+RTGR + +M D + VE YGS  PL Q+A+  + E R +
Sbjct: 6   LKDTKTKMQKAVEATKDEFATIRTGRANAAMFDGIVVEYYGSPTPLKQLASFNIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+     +   I ES+LG+ P  +G+ +R+ +P  TE+RR   VK A   AE+ +
Sbjct: 66  IIQPFDRNATQDIIHAISESDLGVTPTDDGKTIRVVLPALTEDRRKEYVKQAKTKAEEGR 125

Query: 127 ISVRNIRR---DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +S+R IRR   D M+ LKK +  G   ED V     ++  +T      +D+  E+K+ ++
Sbjct: 126 VSIRGIRRKAKDAMEALKKDKTLG---EDEVERGVKELDTVTKKFTDEVDTLLEDKETDL 182

Query: 184 M 184
           M
Sbjct: 183 M 183


>gi|171920586|ref|ZP_02695872.2| ribosome recycling factor [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185179028|ref|ZP_02555297.2| ribosome recycling factor [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024068|ref|ZP_02569849.2| ribosome recycling factor [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518344|ref|ZP_02556270.2| ribosome recycling factor [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524301|ref|ZP_02557887.2| ribosome recycling factor [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867937|ref|ZP_03079935.1| ribosome recycling factor [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273305|ref|ZP_03205841.1| ribosome recycling factor [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|225550912|ref|ZP_03771861.1| ribosome recycling factor [Ureaplasma urealyticum serovar 2 str.
           ATCC 27814]
 gi|225551642|ref|ZP_03772588.1| ribosome recycling factor [Ureaplasma urealyticum serovar 8 str.
           ATCC 27618]
 gi|171903292|gb|EDT49581.1| ribosome recycling factor [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209122|gb|EDU06165.1| ribosome recycling factor [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188019107|gb|EDU57147.1| ribosome recycling factor [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997968|gb|EDU67065.1| ribosome recycling factor [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659871|gb|EDX53251.1| ribosome recycling factor [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660414|gb|EDX53673.1| ribosome recycling factor [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249825|gb|EDY74605.1| ribosome recycling factor [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|225379457|gb|EEH01822.1| ribosome recycling factor [Ureaplasma urealyticum serovar 8 str.
           ATCC 27618]
 gi|225380066|gb|EEH02428.1| ribosome recycling factor [Ureaplasma urealyticum serovar 2 str.
           ATCC 27814]
          Length = 183

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 3/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN  I    I++     + ++  + + LRTGR +P++LD + V+ YGS  P+NQ+AN++V
Sbjct: 1   MNFKIYETKIREEFELVLKWMHNEFIKLRTGRATPAILDGILVDYYGSMTPINQLANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L +  +D+  +  V   I+ SNLG+NP V+  ++R+     TEE R  L K A  
Sbjct: 61  PEPRVLAIKPYDRSSIKDVASAINASNLGVNPQVDVDIIRLTFAAPTEEVRKNLAKKAKQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++KI VR+IR++  D  KK   +    ED     + ++  +T    K I++    K+
Sbjct: 121 VGEEAKIRVRHIRQEAQDLFKKDSST---VEDDKKFFQTELDNLTKELNKEIEAVVSHKE 177

Query: 181 KEIM 184
           K+IM
Sbjct: 178 KDIM 181


>gi|197294561|ref|YP_001799102.1| ribosome recycling factor [Candidatus Phytoplasma australiense]
 gi|226703266|sp|B1VA77|RRF_PHYAS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|171853888|emb|CAM11850.1| Ribosome recycling factor [Candidatus Phytoplasma australiense]
          Length = 184

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 104/177 (58%), Gaps = 4/177 (2%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           I+ +M      + K+ + +RTG  +P++L+ V +  YGS  PL  +++++V E   L + 
Sbjct: 12  IEKKMSQAQEVMLKNFLEIRTGYANPNILNKVNINYYGSQTPLKTLSSISVSEGTQLQIK 71

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            ++K ++ S+++ I  S+LG+ P  +G +LR+  P+ TEERR  LVK     +E++K++V
Sbjct: 72  PYEKTLIPSIKKAILASDLGITPETDGVLLRLNFPKPTEERRKVLVKEVDKLSEQTKVAV 131

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIRRD  D +KK       ++D+ A     IQ +TD  +K I+     K KE++ F
Sbjct: 132 RNIRRDANDKIKKL----ALTKDLEALYLEKIQILTDKNMKMIEKEANNKNKELLKF 184


>gi|227875940|ref|ZP_03994063.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35243]
 gi|227843472|gb|EEJ53658.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35243]
          Length = 185

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 101/181 (55%), Gaps = 6/181 (3%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ K +M   +   K +  T+RTGR + +M D + VE YGS  PL Q+A+  + E R +
Sbjct: 6   LKDTKTKMQKAVEATKDEFATIRTGRANAAMFDGIVVEYYGSPTPLKQLASFNIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+     +   I ES+LG+ P  +G+ +R+ +P  TE+RR   VK A   AE+ +
Sbjct: 66  IIQPFDRNATQDIIHAISESDLGVTPTDDGKTIRVVLPALTEDRRKEYVKQAKTKAEEGR 125

Query: 127 ISVRNIRR---DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +S+R IRR   D M+ LKK +  G   ED V     ++  +T      +D+  E+K+ ++
Sbjct: 126 VSIRGIRRKAKDAMEALKKDKTLG---EDEVERGVKELDTVTKKFTDEVDTLLEDKETDL 182

Query: 184 M 184
           M
Sbjct: 183 M 183


>gi|309811476|ref|ZP_07705258.1| ribosome recycling factor [Dermacoccus sp. Ellin185]
 gi|308434527|gb|EFP58377.1| ribosome recycling factor [Dermacoccus sp. Ellin185]
          Length = 186

 Score =  111 bits (278), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 101/179 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K+D  ++RTGR + +M + + V+ YG+  PL Q+A+    E R +
Sbjct: 7   LLEAEEKMDKAIEATKEDFASIRTGRANAAMFNRLTVDYYGAPTPLQQLASFQTPEARTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  ++ +E+ + +S+LG+NP  +G  +R  +P  TEERR   +K+A   AE  +
Sbjct: 67  LIIPFDKSAISEIEKTLRDSDLGVNPSNDGNQIRCILPALTEERRKDYIKMAKDKAENGR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +SVRN+RR     + K  K  +  ED  A  E D+  +T   +  +D+  + K+ E++ 
Sbjct: 127 VSVRNVRRKANQDIDKLVKDKEVGEDDGARAEKDLDAMTKKRVDTVDALLKGKEAELLE 185


>gi|323341770|ref|ZP_08082003.1| ribosome recycling factor [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464195|gb|EFY09388.1| ribosome recycling factor [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 181

 Score =  111 bits (278), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 98/171 (57%), Gaps = 3/171 (1%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M + I   +  +  LR+GR + SML  V ++ YGS  P+ Q+A ++V+E R LV+  +D 
Sbjct: 12  MDEVIENFETRLGGLRSGRANVSMLYGVSIDYYGSATPIEQIAQISVVEGRQLVIKPFDP 71

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E  I+  NLGL    +G V+RI VP+ TEE R  + K   + AE +K++ RN+R
Sbjct: 72  SALKEIEHTINNGNLGLLAQNDGTVVRINVPQLTEETRKEVSKQVGSLAEDAKVAARNVR 131

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RD  D +K         ED    L +D+QK+TD   K ID+  ++K KEIM
Sbjct: 132 RDLNDEIKNLE---DLPEDQEKRLLDDVQKLTDDITKKIDAISKDKVKEIM 179


>gi|159901963|gb|ABX10694.1| ribosome recycling factor [uncultured planctomycete 8FN]
          Length = 186

 Score =  111 bits (278), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 100/179 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   +  LK  +  +RTGR +P ++D ++V+ YGS  P+ Q+A V   EP  +
Sbjct: 7   LLDTEERMTKALDVLKNALSGIRTGRANPGLVDSIRVDVYGSPTPIKQIATVGAPEPTQI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D  ++  +E+ I   +LG NP  +G+V+RI VP  + + R  +V      +E +K
Sbjct: 67  VIRPYDASIIKEIEKAIVAGDLGYNPQSDGRVIRINVPALSTDVRKKMVSRIKELSEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ISVRN+RRD       + K    SED    +++++Q +T      I +  + K+KE+M 
Sbjct: 127 ISVRNVRRDSNKAADTAEKDKSISEDERDDIKDEVQTLTKQHEDEISAMAKAKEKEVME 185


>gi|66827879|ref|XP_647294.1| hypothetical protein DDB_G0268518 [Dictyostelium discoideum AX4]
 gi|60475777|gb|EAL73712.1| hypothetical protein DDB_G0268518 [Dictyostelium discoideum AX4]
          Length = 263

 Score =  111 bits (278), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 108/179 (60%), Gaps = 4/179 (2%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D+ ++  +   TI ++ +++  +R GRV P +L+ + VE    ++ L  +A +T+ +  
Sbjct: 86  VDISSVSSQGDKTIEYVSRELGNIRFGRVGPELLERINVETPSGNLLLPHMAMITIKDSL 145

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L ++++D  ++++VER +  S LGLNP      +R+ +P+ T++ R  L+K  +  +E 
Sbjct: 146 TLNITLYDSSLLSNVERALTNSGLGLNPQTFDTTIRVSLPKPTQDLRQKLIKQVNTISED 205

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +K+S+R  R+DGMD LK+     K ++D   +LE +IQKITD  IK+I    E K KEI
Sbjct: 206 AKVSIRRHRKDGMDILKRY----KLTKDDEKTLEKNIQKITDDYIKSITKITETKLKEI 260


>gi|148910289|gb|ABR18224.1| unknown [Picea sitchensis]
          Length = 269

 Score =  111 bits (278), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 101/172 (58%), Gaps = 2/172 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   I  L +++  LRTGR S  MLD + +E+ G   PL+++A V+VL+ + L V+ +D
Sbjct: 98  QMQAGIDALSRELSKLRTGRASAGMLDHIIIESDGVRTPLSRIAAVSVLDSQTLSVTPYD 157

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            + +  VER I  S LGLNP +EGQ L +P+P  T+E   A+ K+    +E  K S+R  
Sbjct: 158 LDAIKDVERAIVSSPLGLNPTLEGQRLVVPIPALTKEHTQAMSKLVSKASEDVKQSIRRA 217

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R+  +D +KK+  S   S+D V  LE +I  +T   +K  +   + K+KEIM
Sbjct: 218 RQKALDSIKKAVSS--MSKDDVKRLEKEIDDLTKKFVKTAEDMCKTKEKEIM 267


>gi|262340905|ref|YP_003283760.1| ribosome recycling factor [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272242|gb|ACY40150.1| ribosome recycling factor [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 184

 Score =  110 bits (276), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 100/165 (60%), Gaps = 5/165 (3%)

Query: 21  LKKDMMTLRTGRVS-PSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASV 79
           LK+++  +R G  S  S+L+ +K++ YGS   L +VAN+TV++   + +  WD+ +V+ +
Sbjct: 22  LKEEIHRIRLGSKSVASILEKIKIKCYGSSFLLIEVANITVVDNMNITIHPWDRSIVSYI 81

Query: 80  ERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDH 139
           ++ I ++NLG  P  +G+ + I +P  TEE R  L+K   +  E +KI +RN+R+    H
Sbjct: 82  DKAIIDANLGFMPTNKGESIHIHLPIITEEGRKNLMKKIKSQTEHAKILIRNVRKKNNQH 141

Query: 140 LKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +KK     K SED   S EN IQKIT   I  ID FF  K+KEI+
Sbjct: 142 IKKL----KISEDFSKSGENRIQKITSEYIHQIDDFFLYKEKEIL 182


>gi|255327231|ref|ZP_05368305.1| ribosome recycling factor [Rothia mucilaginosa ATCC 25296]
 gi|255295511|gb|EET74854.1| ribosome recycling factor [Rothia mucilaginosa ATCC 25296]
          Length = 185

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 102/179 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  TI   K +   +RTGRV+P++   +  E YG+  PL Q+ +  V + R +
Sbjct: 6   LAEAGEKMEKTIEATKTEFAKVRTGRVNPAIFSGLTAEYYGAPTPLQQLVSFNVEDARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D   +A++E+ + +S+LG+NP  +G  +R+ +PE T ERR    K+ ++ AE+S+
Sbjct: 66  KIVPFDVTALAAIEKALRDSDLGVNPSNDGAAIRVVMPEMTAERRKEYTKLVNSKAEESR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RN+RR     + K  K  +  ED  A  E ++  +T   I  +D+ ++ K+ E++ 
Sbjct: 126 VSIRNVRRHAKTAIDKLVKDSEIGEDEGARAEKELDALTKKHIDQVDALYKHKEAELLE 184


>gi|282850823|ref|ZP_06260197.1| ribosome recycling factor [Lactobacillus gasseri 224-1]
 gi|282557775|gb|EFB63363.1| ribosome recycling factor [Lactobacillus gasseri 224-1]
          Length = 155

 Score =  109 bits (273), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 91/144 (63%), Gaps = 2/144 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+VI  +  KD M  +I+  +K++  +R    + S+L+ +KV+ YG   PL Q+++V++ 
Sbjct: 3   NEVI--EKAKDNMKKSIAVFQKELGGIRAAVANASLLEGIKVDYYGVPTPLTQMSSVSIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+V+ +DK  +  +E  I  S+LG+ P  +G V+RI +P+ T ERR  + K     
Sbjct: 61  EARVLMVTPYDKSSLDDIEHAILASDLGITPANDGTVIRIVIPQLTGERRQEIAKQVGKL 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRK 145
           AEK KI+VRN+RRD MD LK+  K
Sbjct: 121 AEKGKIAVRNVRRDAMDTLKRQEK 144


>gi|37498991|gb|AAQ91586.1| ribosome recycling factor [Helicobacter mustelae]
          Length = 139

 Score =  109 bits (273), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 85/138 (61%)

Query: 36  SMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVE 95
           ++LD VKV+ YG+  PLNQV +V   +   ++++ W+K ++  +ER I E+N+G+NP  +
Sbjct: 1   NILDNVKVDYYGTPTPLNQVGSVIAQDATTILITPWEKNLLKDIERAIQEANIGVNPNND 60

Query: 96  GQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
           G+ +++  P  T+E+R  + K   A  EK+KI++RNIR+D  + +KK  K    +ED   
Sbjct: 61  GETIKLFFPPMTQEQRKEIAKDTKAMGEKAKIAIRNIRQDSNNQIKKLEKDKNITEDESK 120

Query: 156 SLENDIQKITDSTIKNID 173
              + IQK TD   K ID
Sbjct: 121 KAHDTIQKYTDEYAKKID 138


>gi|328768245|gb|EGF78292.1| hypothetical protein BATDEDRAFT_26860 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 273

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 102/172 (59%), Gaps = 3/172 (1%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M + +  L+KD+  +R GR +P++LD V+V+  G  V L  VA +TV +   LV+ V D+
Sbjct: 104 MQNAVEKLRKDLGLIRMGRANPALLDSVRVKHQGKSVALVDVAQITVKDAHTLVIVVSDE 163

Query: 74  EMVASVERGIHESNLGLNP-IVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           ++V+ VE+ + ++NLGLNP  +    L++PVP   +E R  ++K     AE  ++ +R+ 
Sbjct: 164 QLVSVVEKAVRDANLGLNPQSLPPSSLKVPVPRMAKEFRETIIKNIGRIAEACRVRIRSA 223

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R D    LK  R S K + D    LE DIQ++TD  IK+ D+    K+KEI+
Sbjct: 224 RADARTALK--RTSLKPNSDQSRMLEKDIQQLTDKYIKDTDAAVLAKEKEIV 273


>gi|296129334|ref|YP_003636584.1| ribosome recycling factor [Cellulomonas flavigena DSM 20109]
 gi|296021149|gb|ADG74385.1| ribosome recycling factor [Cellulomonas flavigena DSM 20109]
          Length = 185

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 108/179 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR + +M   + V+ YG+  PL Q+A+  V+E R +
Sbjct: 6   LLEAEEKMDKAVEVAKEDFAAIRTGRANAAMFAKIFVDYYGAPTPLQQLASFNVVEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +DK    ++E+ + +S+LG+NP  +G V+R+ +P  T ERR   VK+A + AE ++
Sbjct: 66  LVSPFDKSSTTAIEKALRDSDLGVNPTNDGNVVRVVLPALTAERRKDFVKLAKSKAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ISVR++RR   + L +  K G+A ED VA  E +++ +T   ++ +D     K+ E++ 
Sbjct: 126 ISVRSVRRRAKEELDRIAKDGEAGEDEVARAEKELEVLTKKHVELVDQLLASKESELLE 184


>gi|51971543|dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis thaliana]
          Length = 267

 Score =  108 bits (271), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 100/171 (58%), Gaps = 2/171 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   I  L +D+  LRTGR +P MLD + VE  G  +PLN +A V+VL+P+ L V+ +D
Sbjct: 96  QMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYD 155

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            + V  +E+ I  S LGLNP ++GQ L   +P  T+E   A+ K+    +E  K S+R  
Sbjct: 156 PDTVKELEKAIVASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRA 215

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R+  +D +KK+  S    +D V  LE ++ ++T   +K+ +   + K+KEI
Sbjct: 216 RQKALDTIKKAGSS--LPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEI 264


>gi|42563413|ref|NP_186829.3| ribosome recycling factor family protein / ribosome releasing
           factor family protein [Arabidopsis thaliana]
 gi|34146850|gb|AAQ62433.1| At3g01800 [Arabidopsis thaliana]
 gi|51970776|dbj|BAD44080.1| putative ribosome recycling factor [Arabidopsis thaliana]
 gi|62319213|dbj|BAD94407.1| putative ribosome recycling factor [Arabidopsis thaliana]
 gi|332640195|gb|AEE73716.1| ribosome recycling factor [Arabidopsis thaliana]
          Length = 267

 Score =  108 bits (270), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 100/171 (58%), Gaps = 2/171 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   I  L +D+  LRTGR +P MLD + VE  G  +PLN +A V+VL+P+ L V+ +D
Sbjct: 96  QMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYD 155

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            + V  +E+ I  S LGLNP ++GQ L   +P  T+E   A+ K+    +E  K S+R  
Sbjct: 156 PDTVKELEKAIVASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRA 215

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R+  +D +KK+  S    +D V  LE ++ ++T   +K+ +   + K+KEI
Sbjct: 216 RQKALDTIKKAGSS--LPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEI 264


>gi|255536967|ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus communis]
 gi|223549449|gb|EEF50937.1| ribosome recycling factor, putative [Ricinus communis]
          Length = 262

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 101/171 (59%), Gaps = 2/171 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   I  L +++  LRTGR S  MLD + VE  G  +PLN++A V V++P+ L V+ +D
Sbjct: 91  QMEAAIVSLSRELTKLRTGRASAGMLDHIIVETDGVKMPLNRLAVVAVMDPKTLSVNPYD 150

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             MV+++E+ I  S LGLNP V+G+ L   +P  T+E   A+ KV     E+ K SVR  
Sbjct: 151 PNMVSALEKAIVSSPLGLNPRVDGERLIASIPPLTKEHMQAMCKVVGKSCEEVKQSVRRA 210

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R+  +D +KK+      S+D V  LE ++ ++T   +K+ +   + K+KEI
Sbjct: 211 RQKALDTIKKA--GSNLSKDDVKRLEKEVDELTKKFVKSAEDICKAKEKEI 259


>gi|15606111|ref|NP_213488.1| ribosome recycling factor [Aquifex aeolicus VF5]
 gi|3914876|sp|O66928|RRF_AQUAE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|14277735|pdb|1GE9|A Chain A, Solution Structure Of The Ribosome Recycling Factor
 gi|2983294|gb|AAC06886.1| ribosome recycling factor [Aquifex aeolicus VF5]
          Length = 184

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 107/171 (62%), Gaps = 4/171 (2%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   + + K ++  LRT R S ++++ +KVE YGS VP+ Q+  ++V E   +V+ VWD+
Sbjct: 16  MKKAVEYYKNEIAGLRTSRASTALVEEIKVEYYGSKVPIKQLGTISVPEHNQIVIQVWDQ 75

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             V ++E+ I E  L LNP V+G V+R+ +P  TEERR  LV++ H   E++++ VRN+R
Sbjct: 76  NAVPAIEKAIREE-LNLNPTVQGNVIRVTLPPLTEERRRELVRLLHKITEEARVRVRNVR 134

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R+  + +++    G + ++   +LE  +QK+TD  I  I+   E K+KEIM
Sbjct: 135 REAKEMIEEL--EGISEDEKKRALER-LQKLTDKYIDEINKLMEAKEKEIM 182


>gi|197127175|gb|ACH43673.1| putative mitochondrial ribosome recycling factor isoform 1
           [Taeniopygia guttata]
          Length = 259

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+   + M   I  LK+D     + R SP  LD + V       PLNQ+  ++   P
Sbjct: 79  IINLEETNEDMQAVIEALKEDFSRNLSVRTSPGALDHITVMTKDGKFPLNQLGQISQKSP 138

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP V+G V+R+PVP+ T E R +L K+A  + 
Sbjct: 139 QLMIVNMTSFPESTAAAAKAIRESGMNLNPEVDGTVIRVPVPKVTREHRESLAKLAKQFT 198

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            KSK ++R +R   +  +KKS+   K SED +  LE  IQ++ D     +D     K KE
Sbjct: 199 NKSKEALRKVRSKSITQVKKSK--NKVSEDTIWLLEKQIQQMADEAATEMDKLLAAKTKE 256

Query: 183 IM 184
           ++
Sbjct: 257 LL 258


>gi|115495125|ref|NP_001069775.1| ribosome-recycling factor, mitochondrial precursor [Bos taurus]
 gi|122142430|sp|Q0VCQ4|RRFM_BOVIN RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|111305001|gb|AAI20055.1| Mitochondrial ribosome recycling factor [Bos taurus]
          Length = 262

 Score =  107 bits (268), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 104/182 (57%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      +PLNQ++ +++  P
Sbjct: 82  IINLEEVDEEMKSVIEALKDNFNKTVNIRTSPGALDNITVVTADGKLPLNQISQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + ++ +KKS+   KASED +  +E  I ++ D T+  +D     K KE
Sbjct: 202 NKAKDSLRKVRTNAINKVKKSK--DKASEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|39938654|ref|NP_950420.1| ribosome recycling factor [Onion yellows phytoplasma OY-M]
 gi|47116996|sp|P61308|RRF_ONYPE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39721763|dbj|BAD04253.1| ribosome recycling factor [Onion yellows phytoplasma OY-M]
          Length = 184

 Score =  107 bits (267), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 104/178 (58%), Gaps = 4/178 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++ +M      + K+   +RTG  +P++LD + V  YG+   L  +A+++V E   L
Sbjct: 9   LASLETKMTQAQEVMLKNFCDIRTGTANPNILDKITVNYYGAPTFLKTLASISVSEGNQL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D  ++ ++++ +  SNLG+ P  +G V+R+  P+ TEERR AL+K     AEK+K
Sbjct: 69  NIKPYDSTLIPNIKKVLLASNLGITPQTDGLVVRLVFPKPTEERRKALMKEVEQLAEKTK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RN+RR+G D +KK     + ++D+     N IQ +TD  IK I+     K  E++
Sbjct: 129 VAIRNVRREGNDKIKKV----ELTKDLETFYLNQIQTLTDKNIKLIEKHTTTKNTELL 182


>gi|260362405|ref|ZP_05775360.1| ribosome recycling factor [Vibrio parahaemolyticus K5030]
 gi|308113970|gb|EFO51510.1| ribosome recycling factor [Vibrio parahaemolyticus K5030]
          Length = 124

 Score =  107 bits (267), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 77/123 (62%)

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R L ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE
Sbjct: 2   RTLAITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAE 61

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
             +++VRNIRRD  + LK   K  + SED     + +IQK+TD  +K ID     K+KE+
Sbjct: 62  GGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKEL 121

Query: 184 MHF 186
           M  
Sbjct: 122 MEV 124


>gi|270643372|ref|ZP_06222161.1| ribosome recycling factor [Haemophilus influenzae HK1212]
 gi|270317279|gb|EFA28844.1| ribosome recycling factor [Haemophilus influenzae HK1212]
          Length = 127

 Score =  107 bits (267), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 55/127 (43%), Positives = 80/127 (62%)

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALV 115
           ANV   + R L V+V+D+ ++++VE+ I  S+LGLNP   G  +RIP+P  TEERR  L+
Sbjct: 1   ANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRIPLPPLTEERRRDLI 60

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           K+     E+ K++VRN+RRD  D +K   K  + SE+     E +IQKITD  IK +D  
Sbjct: 61  KIVKGEGEQGKVAVRNVRRDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEV 120

Query: 176 FEEKKKE 182
             +K+KE
Sbjct: 121 LADKEKE 127


>gi|308806109|ref|XP_003080366.1| COG0233: Ribosome recycling factor (ISS) [Ostreococcus tauri]
 gi|116058826|emb|CAL54533.1| COG0233: Ribosome recycling factor (ISS) [Ostreococcus tauri]
          Length = 529

 Score =  107 bits (266), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 87/161 (54%), Gaps = 4/161 (2%)

Query: 24  DMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGI 83
           D+  LRT R S  M+D + V+ YG+  PL+ VA +T    + L V+++D     SVE+ I
Sbjct: 77  DLSHLRTARASEGMIDHIIVDVYGAPTPLSHVATITAPNAQTLSVTLFDPSTKPSVEKAI 136

Query: 84  HESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKS 143
             S LGL P      L +P+P  T++ R  + K+AH   E +KI+ RNIR   + H+K++
Sbjct: 137 MNSPLGLVPRATSDGLIVPIPAMTQDTRKEVCKLAHKLGETAKIAARNIRHKALKHIKRA 196

Query: 144 RKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
                ASED    LE  +Q + D T   I S    K KEIM
Sbjct: 197 ----AASEDEQKRLEKALQAVADDTASKIASRVAAKDKEIM 233


>gi|283458519|ref|YP_003363147.1| ribosome recycling factor [Rothia mucilaginosa DY-18]
 gi|283134562|dbj|BAI65327.1| ribosome recycling factor [Rothia mucilaginosa DY-18]
          Length = 203

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 100/178 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  TI   K +   +RTGRV+P++   +  E YG+  PL Q+ +  V + R +
Sbjct: 24  LAEAGEKMEKTIEATKTEFAKVRTGRVNPAIFSGLTAEYYGAPTPLQQLVSFNVEDARTV 83

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D   +A++E+ + +S+LG+NP  +G  +R+ +PE T ERR    K+ +  AE+++
Sbjct: 84  KIVPFDVTALAAIEKALRDSDLGVNPSNDGAAIRVVMPEMTAERRKEYTKLVNHKAEEAR 143

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           IS+RN+RR     + K  K  +  ED  A  E ++   T   I  +D+ ++ K+ E++
Sbjct: 144 ISIRNVRRHAKTAIDKLVKDSEIGEDEGARAEKELDAQTKKHIDQVDALYKHKEAELL 201


>gi|70728561|ref|YP_258310.1| ribosome recycling factor [Pseudomonas fluorescens Pf-5]
 gi|85543002|sp|Q4KHH3|RRF_PSEF5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|68342860|gb|AAY90466.1| ribosome recycling factor [Pseudomonas fluorescens Pf-5]
          Length = 185

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 99/177 (55%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  L      +RTG+  PS+L  V V  YG+  PL+ VANVTV + + L 
Sbjct: 7   KDAQERMKKSLESLAHAFGQIRTGKAHPSILGSVMVPYYGTDTPLSGVANVTVKDSQTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+ ++++ I  + L LNP   G++L I +   TEE R    K A A AE +++
Sbjct: 67  VVPFERNMLGAIDKAIGSAGLNLNPTNLGELLLIKMAPLTEETRKGFTKQARAAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRNIRRD +  LKK  K  + SED       +I K+       I    EEK+K++M
Sbjct: 127 AVRNIRRDALGELKKLTKDKEISEDEERRGSAEIDKLIKDFEAQIAKATEEKEKDLM 183


>gi|291408419|ref|XP_002720540.1| PREDICTED: mitochondrial ribosome recycling factor [Oryctolagus
           cuniculus]
          Length = 262

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 104/182 (57%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+++ + M   +  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 82  IINLEDVDEDMKSVLEALKDNFNKTLNIRTSPGSLDQITVVTADGKLALNQISQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ +KKS+   KASED V  +E  I ++ D TI  +D     K KE
Sbjct: 202 NKAKDSLRRVRTNAMNKVKKSK--DKASEDTVRLIEKQISQMADDTIAELDRHLAVKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|224073899|ref|XP_002189665.1| PREDICTED: mitochondrial ribosome recycling factor [Taeniopygia
           guttata]
          Length = 259

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 99/182 (54%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+   + M   I  LK+D     + R SP  LD + V       PLNQ+  ++   P
Sbjct: 79  IINLEETNEDMQAVIEALKEDFSRNLSVRTSPGALDHITVMTKDGKFPLNQLGQISQKSP 138

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP V+G V+R+PVP+ T E R +L K+A  + 
Sbjct: 139 QLMIVNMTSFPESTAAAAKAIRESGMNLNPEVDGTVIRVPVPKVTREHRESLAKLAKQFT 198

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            KSK ++R +R   +  +KKS+   K SED +  LE  IQ++ D     +D     K K+
Sbjct: 199 NKSKEALRKVRSKSITQVKKSK--NKVSEDTIWLLEKQIQQMADEAATEMDKLLAAKTKK 256

Query: 183 IM 184
           ++
Sbjct: 257 LL 258


>gi|149738437|ref|XP_001501480.1| PREDICTED: similar to mitochondrial ribosome recycling factor
           [Equus caballus]
          Length = 336

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ + + M   +  LK +       R SP  LD + V      + LNQ+  +++  P
Sbjct: 156 IISLEEVDEEMKSVMEALKDNFNKTVNIRTSPGSLDHITVVTADGKLALNQIGQISMKSP 215

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 216 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNT 275

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+   KASED +  +E  I ++ D T+  +D +   K KE
Sbjct: 276 NKAKDSLRKVRTNAMNKLKKSK--DKASEDTIRLIEKQISQMADDTVAELDRYLAVKTKE 333

Query: 183 IM 184
           ++
Sbjct: 334 LL 335


>gi|281205054|gb|EFA79247.1| hypothetical protein PPL_07665 [Polysphondylium pallidum PN500]
          Length = 369

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 107/180 (59%), Gaps = 4/180 (2%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +DL  +K     T+ FL++    +R GR  P +LDL+ VE     + +NQ+A VT+ +P 
Sbjct: 190 VDLNTMKSSCDATVDFLRRGFGNIRCGRTGPELLDLITVETPNGPMSMNQIAMVTIKDPL 249

Query: 65  MLVVSVWDKEMVASVERGIHE-SNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
            L ++++D  ++  VE+ +   S+LG++P ++ Q +++ +P+ T+E R  L+K  +  +E
Sbjct: 250 TLHLTLFDPSLLKHVEKALRSRSDLGMSPQIQDQFIKLTLPKPTQELRQNLIKSVNNLSE 309

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++K+S+R  R++GMD +KK  K  K  E     ++ ++QKITD  I  +    + K KEI
Sbjct: 310 QAKVSIRRHRKEGMDLIKKKYKLIKDDE---QKIDKNVQKITDDYIATLTKLTDAKIKEI 366


>gi|298714900|emb|CBJ27656.1| ribosome recycling factor [Ectocarpus siliculosus]
          Length = 271

 Score =  105 bits (263), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 3/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           ++ +  +   K R    +  L +D   LR G+  P MLD V+VE+YGS   L  VA  ++
Sbjct: 87  LDDIAGIPESKARFDKVLQGLTRDFQGLRGGKTDPGMLDNVRVESYGSMTNLASVAQASM 146

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ-VLRIPVPETTEERRLALVKVAH 119
             P+++V+SV+D  M   VE  I E  +GLNP  EGQ  + +P+P+ T+E R A+ KVA 
Sbjct: 147 KGPQLIVLSVYDPGMTKVVEDAIRECGMGLNPNSEGQGQVHVPIPKPTKESREAVAKVAA 206

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
            +AEKSK+ VR IR   +D +KK + S    ED V     +I + T      I    E+K
Sbjct: 207 KHAEKSKVVVRGIRHKILDQIKKKKDS--FPEDDVHMRIKEIDQCTKDAEAGIAGMLEKK 264

Query: 180 KKEIM 184
           K EI+
Sbjct: 265 KAEIL 269


>gi|55958151|emb|CAI14713.1| mitochondrial ribosome recycling factor [Homo sapiens]
          Length = 218

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 38  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 97

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 98  QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNT 157

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K KE
Sbjct: 158 NKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 215

Query: 183 IM 184
           ++
Sbjct: 216 LL 217


>gi|114626542|ref|XP_001135833.1| PREDICTED: similar to Mitochondrial ribosome recycling factor
           isoform 2 [Pan troglodytes]
          Length = 218

 Score =  105 bits (261), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 38  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 97

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 98  QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNT 157

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K KE
Sbjct: 158 NKAKDSLRKVRTNSMNKLKKSKYT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 215

Query: 183 IM 184
           ++
Sbjct: 216 LL 217


>gi|297270215|ref|XP_002800031.1| PREDICTED: ribosome-recycling factor, mitochondrial isoform 2
           [Macaca mulatta]
          Length = 262

 Score =  105 bits (261), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ+  +++  P
Sbjct: 82  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQIGQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGMLIRVPIPQVTREHRETLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K KE
Sbjct: 202 NKAKDSLRKVRTNAMNKLKKSKDT--VSEDTIRLVEKQISQMADDTVAELDRHLAVKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|85057831|ref|YP_456747.1| ribosome recycling factor [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123518096|sp|Q2NIS5|RRF_AYWBP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|84789936|gb|ABC65668.1| ribosome recycling factor [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 184

 Score =  105 bits (261), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 100/167 (59%), Gaps = 4/167 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++ +M      + K+   +RTG  +P++LD + V  YG+   L  +A+++V E   +
Sbjct: 9   LASLEIKMTQAQELMLKNFCDIRTGTANPNILDKITVNYYGATTFLKTLASISVSEGNQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D  ++ ++++ +  SNLG+ P  +G V+R+  P+ TEERR AL+K     +EK+K
Sbjct: 69  NIKPYDSNLIPNIKKVLLASNLGITPQTDGVVVRLVFPKPTEERRKALMKEVEQLSEKTK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           +++RN+RR+G D +KK     + ++D+     N IQ +TD  IK ID
Sbjct: 129 VAIRNVRREGNDKIKKV----ELTKDLETFYLNQIQTLTDKNIKLID 171


>gi|20270317|ref|NP_620132.1| ribosome-recycling factor, mitochondrial isoform 1 precursor [Homo
           sapiens]
 gi|62901043|sp|Q96E11|RRFM_HUMAN RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|15341771|gb|AAH13049.1| Mitochondrial ribosome recycling factor [Homo sapiens]
 gi|55958149|emb|CAI14711.1| mitochondrial ribosome recycling factor [Homo sapiens]
 gi|158256638|dbj|BAF84292.1| unnamed protein product [Homo sapiens]
 gi|312150650|gb|ADQ31837.1| mitochondrial ribosome recycling factor [synthetic construct]
          Length = 262

 Score =  105 bits (261), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 82  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K KE
Sbjct: 202 NKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|330846602|ref|XP_003295107.1| hypothetical protein DICPUDRAFT_160263 [Dictyostelium purpureum]
 gi|325074270|gb|EGC28370.1| hypothetical protein DICPUDRAFT_160263 [Dictyostelium purpureum]
          Length = 265

 Score =  105 bits (261), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 100/179 (55%), Gaps = 4/179 (2%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL   ++    T+ ++ ++   +R GR  P +LD + VE    ++ L  +A VTV +P 
Sbjct: 88  IDLSRYQEASMKTLDYISREYGNIRFGRAGPELLDRINVETPNGNLLLPHIAMVTVKDPL 147

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L ++++D   V +VE+ I  + LGL P V G V+++ +P+ T + R  L+K  +  +E 
Sbjct: 148 TLNITLYDTSFVKNVEKAIQTAGLGLMPQVSGTVIKVSLPKPTNDLRQKLIKQVNTISED 207

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +K+S+R  R+D MD L    K+ K  +D    LE +IQK+ D  + NI    + K KEI
Sbjct: 208 AKVSIRRHRKDAMDSL----KNYKLRKDDEKLLEKNIQKMIDDYVGNITKLTDSKLKEI 262


>gi|114626532|ref|XP_001135996.1| PREDICTED: mitochondrial ribosome recycling factor isoform 3 [Pan
           troglodytes]
 gi|114626534|ref|XP_001136081.1| PREDICTED: mitochondrial ribosome recycling factor isoform 4 [Pan
           troglodytes]
 gi|114626536|ref|XP_001136160.1| PREDICTED: mitochondrial ribosome recycling factor isoform 5 [Pan
           troglodytes]
 gi|114626538|ref|XP_001136239.1| PREDICTED: mitochondrial ribosome recycling factor isoform 6 [Pan
           troglodytes]
          Length = 262

 Score =  104 bits (260), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 82  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K KE
Sbjct: 202 NKAKDSLRKVRTNSMNKLKKSKYT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|297270213|ref|XP_001089220.2| PREDICTED: ribosome-recycling factor, mitochondrial isoform 1
           [Macaca mulatta]
          Length = 336

 Score =  104 bits (260), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ+  +++  P
Sbjct: 156 IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQIGQISMKSP 215

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 216 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGMLIRVPIPQVTREHRETLVKLAKQNT 275

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K KE
Sbjct: 276 NKAKDSLRKVRTNAMNKLKKSKDT--VSEDTIRLVEKQISQMADDTVAELDRHLAVKTKE 333

Query: 183 IM 184
           ++
Sbjct: 334 LL 335


>gi|332229921|ref|XP_003264135.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 1
           [Nomascus leucogenys]
          Length = 336

 Score =  104 bits (259), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 156 IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 215

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 216 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNT 275

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K KE
Sbjct: 276 NKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 333

Query: 183 IM 184
           ++
Sbjct: 334 LL 335


>gi|297685276|ref|XP_002820221.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Pongo
           abelii]
          Length = 336

 Score =  104 bits (259), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 156 IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 215

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 216 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNT 275

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K KE
Sbjct: 276 NKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 333

Query: 183 IM 184
           ++
Sbjct: 334 LL 335


>gi|311246342|ref|XP_003122164.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 1
           [Sus scrofa]
          Length = 262

 Score =  104 bits (259), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 101/182 (55%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ + + M   I  LK +       R SP  LD + V      + LNQ+  +++  P
Sbjct: 82  IISLEEVDEEMKSVIEALKDNFNKTVNIRTSPGSLDQITVVTADGKLALNQIGQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QLILVNMASFPECTAAAIKAIRESGMNLNPDVEGTLIRVPIPKVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+   KASED +  +E  I ++ D T+  ++     K KE
Sbjct: 202 NKAKESLRKVRTNAMNKLKKSK--DKASEDTLRLIEKQISQMADDTVAELERHLAVKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|119607926|gb|EAW87520.1| mitochondrial ribosome recycling factor, isoform CRA_a [Homo
           sapiens]
 gi|119607929|gb|EAW87523.1| mitochondrial ribosome recycling factor, isoform CRA_a [Homo
           sapiens]
          Length = 336

 Score =  104 bits (259), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 156 IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 215

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 216 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNT 275

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K KE
Sbjct: 276 NKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 333

Query: 183 IM 184
           ++
Sbjct: 334 LL 335


>gi|294660229|ref|NP_852872.2| ribosome-recycling factor [Mycoplasma gallisepticum str. R(low)]
 gi|60416389|sp|Q7NC19|RRF_MYCGA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|284811884|gb|AAP56440.2| ribosome-recycling factor (RRF) (Ribosome-releasing factor)
           [Mycoplasma gallisepticum str. R(low)]
 gi|284930333|gb|ADC30272.1| ribosome-recycling factor (RRF) (Ribosome-releasing factor)
           [Mycoplasma gallisepticum str. R(high)]
          Length = 183

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 99/169 (58%), Gaps = 3/169 (1%)

Query: 18  ISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVA 77
           I++ + ++  +R+GR +  +LD V+ E YG   PL ++A++++ EPR +++  ++K  V 
Sbjct: 18  INWFEGELAKVRSGRANLKILDNVRAEYYGEQTPLIEMASLSIPEPREILIKPYEKSSVN 77

Query: 78  SVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGM 137
            ++  + ++NL L P+V+G  +RI +P  TEE R   VK   A  EK+K  VR IRRD +
Sbjct: 78  LIQAALLKANLNLTPVVDGDKIRIKLPLLTEENRKENVKKVKAVGEKAKQEVRFIRRDTL 137

Query: 138 DHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +K  + + K   D+    E  + KIT   I  IDS   +K+K+++  
Sbjct: 138 NKIKSDKIADK---DLNKYFEEQVDKITKKYIDQIDSILAKKEKDLLSL 183


>gi|332832790|ref|XP_520237.3| PREDICTED: ribosome-recycling factor, mitochondrial isoform 7 [Pan
           troglodytes]
          Length = 336

 Score =  103 bits (258), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 102/182 (56%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 156 IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 215

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 216 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNT 275

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K KE
Sbjct: 276 NKAKDSLRKVRTNSMNKLKKSKYT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 333

Query: 183 IM 184
           ++
Sbjct: 334 LL 335


>gi|295698561|ref|YP_003603216.1| ribosome recycling factor [Candidatus Riesia pediculicola USDA]
 gi|291157311|gb|ADD79756.1| ribosome recycling factor [Candidatus Riesia pediculicola USDA]
          Length = 185

 Score =  103 bits (258), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 98/177 (55%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +K  M   +   +K +  +R+ ++ P++L+ V V  YGS  PLN+++ ++    R L ++
Sbjct: 9   VKKNMNQIVRSFEKRINKIRSEKIDPNILEKVSVFCYGSQTPLNRISLISSKNSRTLSIT 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           V+D+ ++  V+  I +  L     +   V+++  P  TEERR  L+K+    AE  KIS+
Sbjct: 69  VFDRSLIKIVKEEILKLRLDCQIFLSENVIKLVFPLITEERRKNLIKIVQKMAETEKISI 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           R IR+   D +K   KS K  ED    +  +IQ  TD+ IK ID   +EK++ ++HF
Sbjct: 129 RKIRKVTKDKIKTLIKSKKIDEDNGRVIYMEIQDYTDTFIKKIDVILKEKERSLLHF 185


>gi|26554405|ref|NP_758339.1| ribosome recycling factor [Mycoplasma penetrans HF-2]
 gi|44888332|sp|Q8EUH0|RRF_MYCPE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|26454415|dbj|BAC44743.1| ribosome recycling factor [Mycoplasma penetrans HF-2]
          Length = 183

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 95/167 (56%), Gaps = 3/167 (1%)

Query: 18  ISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVA 77
           + +L  +   +++GR +P +LD V VEAYG    L ++AN+ V+E + +VV  +DK ++ 
Sbjct: 18  LEWLDSEFNKIKSGRPNPKILDHVMVEAYGDKSKLFEIANMQVVEGKQIVVKPYDKTLLH 77

Query: 78  SVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGM 137
            +   I + NLGL+  V+   LRI  P  TEE R A VK    ++E+ K+ +RNIR+D  
Sbjct: 78  DINSAIQKENLGLSVQVDADSLRIIFPSPTEETRKASVKKVKEFSEQVKVEIRNIRKDVH 137

Query: 138 DHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
             +K  +   +  ED +   E D+ K+T      +D  F EK+KE+M
Sbjct: 138 HKIKDDK---ELREDELKWYEEDLDKLTREWNAKVDKAFAEKEKELM 181


>gi|67925886|ref|ZP_00519172.1| Ribosome recycling factor [Crocosphaera watsonii WH 8501]
 gi|67852265|gb|EAM47738.1| Ribosome recycling factor [Crocosphaera watsonii WH 8501]
          Length = 122

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 78/120 (65%)

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+++  +DK  +  +E+ I  S++GL P  +GQV+R+ +P  TEERR  LVK+A   AE+
Sbjct: 1   MIMIQPYDKGSMGQIEKAIQMSDVGLTPNNDGQVIRLNIPSLTEERRKDLVKLASKMAEE 60

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            K+++RNIRRD +D ++K  K+   S+D    L++DIQK+TD     ID   + K+ +IM
Sbjct: 61  GKVAIRNIRRDAIDDVRKQEKNSDISKDESRDLQDDIQKVTDKFTNKIDDLLKSKETDIM 120


>gi|73968248|ref|XP_537859.2| PREDICTED: similar to mitochondrial ribosome recycling factor
           isoform 1 [Canis familiaris]
          Length = 262

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 101/182 (55%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   +  LK +     + R SP  LD + V      + LNQ+  +++  P
Sbjct: 82  IINLEEVDEEMKSVMEALKDNFNKTISIRTSPGSLDRITVVTANGKLALNQIGQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            +++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  +VK+A    
Sbjct: 142 HLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMMVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+   K SED +  +E  I ++ D T+  +D     K KE
Sbjct: 202 NKAKDSLRKVRTNAMNKLKKSK--DKVSEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|50954908|ref|YP_062196.1| ribosome recycling factor [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|60390246|sp|Q6AEV4|RRF_LEIXX RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|50951390|gb|AAT89091.1| ribosome recycling factor [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 186

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 101/180 (56%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + +   RM  T+   K+D  T+  GR +P++   V V+ YGS  PL Q+A +   E R+L
Sbjct: 8   ISDASQRMSKTLEAAKEDFGTVSAGRANPALFQKVLVDYYGSPTPLAQLAGLQNPEARVL 67

Query: 67  VVSVWDKEMVASVERGI-HESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+ +DK  +  +ER I    ++  N   +G+++R+ +PE TE+RR   VK+     E +
Sbjct: 68  IVTPYDKGALKEIERAIVTMPSMSANVGNDGEIVRVTLPELTEDRRKEFVKIVRGKGEDA 127

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++RNIRR   D L   +  G+  +D VA  E +++ +T + +  +D   + K+ E++ 
Sbjct: 128 KVAIRNIRRRAKDELDALK--GEVGDDEVARGEKELEALTRTNVDLVDEALKRKEAELLE 185


>gi|284931100|gb|ADC31038.1| ribosome-recycling factor (RRF) (Ribosome-releasing factor)
           [Mycoplasma gallisepticum str. F]
          Length = 183

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 99/169 (58%), Gaps = 3/169 (1%)

Query: 18  ISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVA 77
           I++ + ++  +R+GR +  +LD V+ E YG   PL ++A++++ EPR +++  ++K  V 
Sbjct: 18  INWFEGELAKVRSGRANLKILDNVRAEYYGEQTPLIEMASLSIPEPREILIKPYEKSSVN 77

Query: 78  SVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGM 137
            ++  + ++NL L P+V+G  +RI +P  TEE R   VK   A  EK+K  VR IRRD +
Sbjct: 78  PIQAALLKANLNLTPVVDGDKIRIKLPLLTEENRKENVKKVKAVGEKAKQEVRFIRRDTL 137

Query: 138 DHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +K  + + K   D+    E  + KIT   I  IDS   +K+K+++  
Sbjct: 138 NKIKSDKIADK---DLNKYFEEQVDKITKKYIDLIDSILAKKEKDLLSL 183


>gi|257068198|ref|YP_003154453.1| ribosome recycling factor [Brachybacterium faecium DSM 4810]
 gi|256559016|gb|ACU84863.1| ribosome recycling factor [Brachybacterium faecium DSM 4810]
          Length = 188

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 98/177 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + +M  ++   K +   +RTGR + +ML  + VE YG+  PLNQ++++   E R +
Sbjct: 9   LKDAEAKMKKSVEVTKDEFTAIRTGRANAAMLQGITVEYYGAPTPLNQLSSLQFPEARTI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  ++ +E  + +S+LG+NP   G  LR+ +P  TEERR   VK+A   AE  +
Sbjct: 69  IVTPYDKSAMSGIETALRDSDLGVNPTNNGDNLRVVLPALTEERRKDYVKLARTKAEDGR 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VR  R +    ++K  K  +  ED     E +++ +T      ID     K+ E+
Sbjct: 129 VAVRGSRGNAKKAIEKLVKDKEIGEDEGTRAEKELEALTKKYNDQIDEALGLKETEL 185


>gi|301760406|ref|XP_002915994.1| PREDICTED: ribosome-recycling factor, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 262

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 100/182 (54%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ + + M   +  LK +       R SP  LD + V      + LNQ+  +++  P
Sbjct: 82  IISLEEVDEEMKSVMEALKDNFNKTVNIRTSPGSLDHITVVTADGKLALNQIGQISMKSP 141

Query: 64  RMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V+ V   E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QLILVNMVSFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+   K SED +  +E  I ++ D T+  +D     K KE
Sbjct: 202 NKAKDSLRKVRTNAMNKLKKSK--DKVSEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|27904717|ref|NP_777843.1| ribosome recycling factor [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|44888331|sp|Q89AP1|RRF_BUCBP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|27904114|gb|AAO26948.1| ribosome recycling factor [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 183

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 98/172 (56%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +      + TLR+ R SPS+LD + ++  G  + L +++N+ V     L ++++D
Sbjct: 11  KMDHCVHMFVNQLNTLRSSRASPSILDTILIDYLGQKIQLKKLSNIIVENVNTLRITLFD 70

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            ++  +VE+ I  S L L PI      +I +P  TEERRL L+K+A   AE S+I +RNI
Sbjct: 71  PKIKNNVEKAIISSKLDLIPIFINNYFQIKIPVLTEERRLQLIKLAKKMAENSRICIRNI 130

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RR   + +K   K    S D    L++++Q IT+S ++ I+    +K+K+++
Sbjct: 131 RRLSNEKIKLFLKDKIISSDKERRLQHEVQDITNSYMEKINVILSKKEKDLL 182


>gi|88855238|ref|ZP_01129903.1| ribosome recycling factor [marine actinobacterium PHSC20C1]
 gi|88815766|gb|EAR25623.1| ribosome recycling factor [marine actinobacterium PHSC20C1]
          Length = 183

 Score =  102 bits (255), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 101/180 (56%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M   +   K D  T+RTGR +P++   V V+ YG+  PL Q+A++   E R L
Sbjct: 6   LAEASEKMDKALEAAKDDFGTVRTGRANPALFQKVLVDYYGTPTPLQQLASMVNQEARTL 65

Query: 67  VVSVWDKEMVASVERGIHES-NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +++ +DK  +  +E+ I  + +LG +   +G V+R  +PE TEERR   VK+    AE++
Sbjct: 66  IITPFDKTALKDIEKAIAGAHHLGASVGNDGNVIRATLPELTEERRKDFVKIVRDKAEQA 125

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++S+RN+RR   D L    + G   ED +A  E +++  T + +  +D   + K+ E++ 
Sbjct: 126 RVSLRNVRRKAKDDLDALTEVG---EDEIARAEKELEASTKAHVDAVDDALKRKETELLE 182


>gi|21312752|ref|NP_080698.1| ribosome-recycling factor, mitochondrial precursor [Mus musculus]
 gi|62901049|sp|Q9D6S7|RRFM_MOUSE RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|12845172|dbj|BAB26646.1| unnamed protein product [Mus musculus]
 gi|18044179|gb|AAH19787.1| Mitochondrial ribosome recycling factor [Mus musculus]
 gi|26328197|dbj|BAC27839.1| unnamed protein product [Mus musculus]
 gi|123208257|emb|CAM20861.1| mitochondrial ribosome recycling factor [Mus musculus]
          Length = 262

 Score =  102 bits (254), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 100/182 (54%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ + + M   +  LK +       R +P  LD + V      V LNQ+  +++  P
Sbjct: 82  IISLEEVDEDMKSVVEALKDNFNKTLNIRTAPGSLDHITVVTADGKVALNQIGQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QVILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K ++R +R + M+ LKKS+   K SED +  +E  I ++ D T+  +D     K KE
Sbjct: 202 NKAKENLRKVRTNAMNKLKKSK--DKTSEDTIRLIEKQISQMADDTVAELDQHLAAKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|255644392|gb|ACU22701.1| unknown [Glycine max]
          Length = 261

 Score =  101 bits (252), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 2/175 (1%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N   +M   ++ L  ++  LRTGR SP MLD + VE  G  +PLN++A V+VL+P+ L V
Sbjct: 86  NAVSQMEAAMAALSTELSKLRTGRASPGMLDHIIVETSGLKMPLNRLAVVSVLDPKTLSV 145

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + +D E +  +E  I  S LGLNP  +G+ L   +P  T+E   A+ K+     E ++ S
Sbjct: 146 NPYDPETLKQLENAIVSSPLGLNPKSDGERLIAVIPPLTKEHMQAMTKLVAKSCEDARQS 205

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +R  R+  MD +KK   S    +D +  LE ++  +T   IK+     + K+KEI
Sbjct: 206 IRRARQQAMDAIKKLYSS--LPKDDIKRLEKEVDDLTKKFIKSAKDICKAKEKEI 258


>gi|320165435|gb|EFW42334.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 413

 Score =  101 bits (252), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 8/177 (4%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++ R+  T  FL   +  LRTGR +P+MLD VKV       PLN+   V+V +   L
Sbjct: 242 LDEVRTRLSTTAKFLTTALAKLRTGRATPAMLDSVKVRGR----PLNEHGMVSVKDASTL 297

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+SV D+ ++  +ER I E++L +NP+ +G+ ++  +P+ T+E R  L K+A    E+ K
Sbjct: 298 VISVNDETVLDDIERAIREADLNINPVRDGKFVKCVIPKMTQEFREKLTKMAREQGEEYK 357

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I +R +R   +   KKS      S   V   E D+ K  D   K ID+    K KEI
Sbjct: 358 IRLRRVRAKAITDAKKS----GVSTSEVFRFEKDVGKAFDDQSKQIDTTVSAKIKEI 410


>gi|328874111|gb|EGG22477.1| hypothetical protein DFA_04605 [Dictyostelium fasciculatum]
          Length = 348

 Score =  101 bits (251), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 103/179 (57%), Gaps = 3/179 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +DL  +K R   T+ F+K+    +R GR  P +L+ + VE    ++ +  +A +T+ +  
Sbjct: 171 VDLSTMKQRCEATMDFVKRQFGDIRVGRAGPELLERITVETPNGNMQIQHMAMITIKDAL 230

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L ++ +D  M+ ++E+ + +S+LGLNP   G ++RI +P+ T++ R  L+K  +  +E+
Sbjct: 231 TLHITPYDPNMLKNIEKALQKSDLGLNPTAVGTLIRISLPKPTQDLRNKLLKNVNTISEE 290

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +K+SVR  R++  D + K  +  K  E    ++E +IQK+TD  I  +    E K KEI
Sbjct: 291 AKVSVRRHRKETTDSVVKQFRLTKDDE---KTIEKNIQKMTDDFIAQVTKATESKVKEI 346


>gi|56605784|ref|NP_001008355.1| ribosome-recycling factor, mitochondrial precursor [Rattus
           norvegicus]
 gi|62900751|sp|Q5RKI9|RRFM_RAT RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|55715664|gb|AAH85779.1| Mitochondrial ribosome recycling factor [Rattus norvegicus]
          Length = 262

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 100/182 (54%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ + + M   +  LK +       R +P  LD + V      + LNQ+  +++  P
Sbjct: 82  IISLEEVDEDMKSVMEALKDNFNKTLNIRTAPGSLDHITVVTADGKLALNQIGQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K ++R +R + M+ LKKS+   K SED +  +E  I ++ D T+  +D     K KE
Sbjct: 202 NKAKENLRKVRTNAMNKLKKSK--DKTSEDTIRLIEKQISQMADDTVAELDRHLAAKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|115459126|ref|NP_001053163.1| Os04g0490400 [Oryza sativa Japonica Group]
 gi|21740669|emb|CAD41132.1| OSJNBa0084K20.10 [Oryza sativa Japonica Group]
 gi|38347444|emb|CAE02486.2| OSJNBa0076N16.8 [Oryza sativa Japonica Group]
 gi|113564734|dbj|BAF15077.1| Os04g0490400 [Oryza sativa Japonica Group]
 gi|125548818|gb|EAY94640.1| hypothetical protein OsI_16419 [Oryza sativa Indica Group]
 gi|215704152|dbj|BAG92992.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 260

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 2/171 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +  L +++  LRTGR SP MLD + VE  G  V LN++A V+VL+   L V  +D
Sbjct: 89  QMEAAVVALSRELSKLRTGRASPGMLDHIMVETTGVKVALNRLAVVSVLDAHTLSVMPYD 148

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              + S+E  I  S LG+NP  +G  +   +P  T+E   AL KV    AE  K S+R  
Sbjct: 149 PSSMKSIEHAIISSPLGINPTPDGNRIIANIPPLTKENIQALCKVVTKSAEDFKQSIRRA 208

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R+  +D +KKS  SG   +D V  LE +++++T   IK+ D   + K+KEI
Sbjct: 209 RQKALDTIKKS-ASGMPKDD-VKRLEKEVEELTKKFIKSADDMCKAKEKEI 257


>gi|315302965|ref|ZP_07873688.1| ribosome recycling factor [Listeria ivanovii FSL F6-596]
 gi|313628664|gb|EFR97074.1| ribosome recycling factor [Listeria ivanovii FSL F6-596]
          Length = 119

 Score =  100 bits (250), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 51/112 (45%), Positives = 77/112 (68%)

Query: 75  MVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRR 134
           ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K++VRNIRR
Sbjct: 8   ILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRR 67

Query: 135 DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 68  EANEDLKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 119


>gi|125590832|gb|EAZ31182.1| hypothetical protein OsJ_15282 [Oryza sativa Japonica Group]
          Length = 260

 Score =  100 bits (250), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 2/171 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +  L +++  LRTGR SP MLD + VE  G  V LN++A V+VL+   L V  +D
Sbjct: 89  QMEAAVVALSRELSKLRTGRASPGMLDHIMVETTGVKVALNRLAVVSVLDAHTLSVMPYD 148

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              + S+E  I  S LG+NP  +G  +   +P  T+E   AL KV    AE  K S+R  
Sbjct: 149 PSSMKSIEHAIISSPLGINPTPDGNRIIANIPPLTKENIQALCKVVTKSAEDFKQSIRRA 208

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R+  +D +KKS  SG   +D V  LE +++++T   IK+ D   + K+KEI
Sbjct: 209 RQKALDTIKKS-ASGMPKDD-VKRLEKEVEELTKKFIKSADDMCKAKEKEI 257


>gi|148377315|ref|YP_001256191.1| ribosome recycling factor (ribosome releasingfactor) [Mycoplasma
           agalactiae PG2]
 gi|291319983|ref|YP_003515241.1| ribosome recycling factor (ribosome releasing factor) [Mycoplasma
           agalactiae]
 gi|148291361|emb|CAL58744.1| Ribosome recycling factor (Ribosome releasingfactor) [Mycoplasma
           agalactiae PG2]
 gi|290752312|emb|CBH40283.1| Ribosome recycling factor (Ribosome releasing factor) [Mycoplasma
           agalactiae]
          Length = 182

 Score =  100 bits (250), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 106/184 (57%), Gaps = 4/184 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+++  LQ +++ +   I+ L  ++    TGR +P ++  +K+  Y +  P+ +++N++V
Sbjct: 1   MDELFILQ-LEEEIDKAINHLVFELSKTSTGRANPQLIRGIKINYYDTLTPIEELSNISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E + L++  +D   V  + + I  + LG+NP+ EG  +RI  P  T ER+  LVK    
Sbjct: 60  PEAQQLLIKPFDATTVRDIIKAITSAQLGINPVDEGSQIRIKFPPLTTERKRELVKSLSK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           ++E +K+++RN R++    +K +    + SEDM      D+QKI D  I+++D    +K+
Sbjct: 120 HSETAKVAIRNARQNANKVIKANE---EISEDMQKRYLADVQKIVDKNIEHVDELVSKKE 176

Query: 181 KEIM 184
           KEIM
Sbjct: 177 KEIM 180


>gi|206896074|ref|YP_002247089.1| ribosome recycling factor [Coprothermobacter proteolyticus DSM
           5265]
 gi|254809505|sp|B5Y8J2|RRF_COPPD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|206738691|gb|ACI17769.1| ribosome recycling factor [Coprothermobacter proteolyticus DSM
           5265]
          Length = 186

 Score =  100 bits (248), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 105/175 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++    TI+ +   + T+R  RVSP++L+ V VE  G+   L+++A V   + R L++  
Sbjct: 11  REHFQKTINTMSDQLSTVRASRVSPAILEPVTVEYEGAKYKLSELAMVVAQDARTLIIEP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD  M+ ++ R + ++N+G NP  +G+ +++  P  ++ERR  L ++   Y E+++I++R
Sbjct: 71  WDVSMIPAISRSLQKANVGANPSDDGKRIKLVFPSLSQERREELARLVDKYLEEARIALR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR+ +D +K   K  + SED    ++N++QK  +   K ++   + K+KEIM 
Sbjct: 131 NIRREYIDEVKSKEKKKELSEDESRRIQNELQKAFEEYEKQMEQICQRKRKEIME 185


>gi|332226320|ref|XP_003262337.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Nomascus
           leucogenys]
          Length = 262

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 100/182 (54%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 82  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 141

Query: 64  RMLVVSVWDK-EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+   E R  LVK+A    
Sbjct: 142 QLILVNMASSPECTAAAIKAIRESGMNLNPEVEGALIRVPIPQVIREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +  + ++ LKKS+ +   SED +  +E  I ++ D T+  +D     K KE
Sbjct: 202 NKAKYSLRKVCTNAVNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|313678182|ref|YP_004055922.1| ribosome recycling factor [Mycoplasma bovis PG45]
 gi|312950548|gb|ADR25143.1| ribosome recycling factor [Mycoplasma bovis PG45]
          Length = 183

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 3/170 (1%)

Query: 15  GDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKE 74
           G  I+ L  ++    TGR +P ++  +K+  Y +  P+ ++AN++V E + L++  +D  
Sbjct: 15  GKAINHLVFELSKTSTGRANPQLIRGIKINYYDTLTPIEELANISVPEAQQLLIKPFDAT 74

Query: 75  MVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRR 134
            V  + + I  + LG+NP+ EG  +RI  P  T ER+  LVK    ++E +K+ +RN R+
Sbjct: 75  TVRDIIKAITNAQLGINPVDEGSQIRIKFPPLTTERKKELVKALSKHSEAAKVGIRNARQ 134

Query: 135 DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +    +K    + + SED       D+QKI D  I+++D    +K+KEIM
Sbjct: 135 NANKIIK---SNDEISEDAQKRYLLDVQKIVDKNIEHVDELVSKKEKEIM 181


>gi|209736906|gb|ACI69322.1| Ribosome recycling factor, mitochondrial precursor [Salmo salar]
          Length = 265

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 103/182 (56%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ +K+ M   ++ LK D     + R SP  LD + V       PLNQ+  +++  P
Sbjct: 85  IISLEEVKEDMAAVLTTLKDDFSRNLSIRTSPGALDHIVVSTADGKFPLNQLGQISMKSP 144

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E V +  R + ES++ LNP V+G ++R+ +P+ T E R  L K+A  ++
Sbjct: 145 QLIMVNMTAFPEAVGAATRSLRESSMKLNPEVDGTIIRVAIPKVTREHRENLAKLAKQFS 204

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + +  +KK++ +   SED +  +E  I ++ DS   ++D     K KE
Sbjct: 205 NKAKESLRKVRSNAITQVKKAKDT--VSEDTIRLVEKQIGQMADSFAADVDKQLTTKTKE 262

Query: 183 IM 184
           ++
Sbjct: 263 LL 264


>gi|242076314|ref|XP_002448093.1| hypothetical protein SORBIDRAFT_06g020970 [Sorghum bicolor]
 gi|241939276|gb|EES12421.1| hypothetical protein SORBIDRAFT_06g020970 [Sorghum bicolor]
          Length = 258

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 2/171 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +  L +++  LRTGR +P MLD + VE  G  V LN++A V+VL+   L V  +D
Sbjct: 87  QMDAAVIALSRELSKLRTGRATPGMLDHIMVENAGVKVALNRIAVVSVLDAHTLSVMPYD 146

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              + S+E  I  S LG+NP  +G  +   +P  T+E   AL KV    AE  K S+R  
Sbjct: 147 PTSMKSIEHAIISSPLGINPTPDGNRIIAAIPPLTKENIQALCKVVTKSAEDFKQSIRRA 206

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R+  +D +KKS  S    +D V  +E +++++T   IK+ D   + K+KEI
Sbjct: 207 RQKALDTIKKSASS--MPKDDVKRIEKEVEELTKKFIKSADDMCKAKEKEI 255


>gi|169827156|ref|YP_001697314.1| ribosome recycling factor [Lysinibacillus sphaericus C3-41]
 gi|168991644|gb|ACA39184.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Lysinibacillus sphaericus C3-41]
          Length = 125

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 80/120 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K++M  TI+   +++ ++R GR + S+LD + V+ YG+  P+NQ+A V+V E R+L
Sbjct: 6   LEQAKEKMNKTIAAFTRELSSIRAGRANASLLDRIMVDYYGAPTPINQLAGVSVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK ++  +E+ I +S++G+ P  +G ++R+ +P  TEERR  LVK      +K++
Sbjct: 66  VITPYDKTILGEIEKAIMKSDIGITPTNDGSIIRLMIPALTEERRKDLVKQVQKRQQKTQ 125


>gi|147840489|emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
          Length = 258

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 99/176 (56%), Gaps = 2/176 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N   +M   +  L +++  LRTGR S  MLD + VE  G  +PL+++A V+VL+P+ L 
Sbjct: 82  ENAMSQMDAAVVALSRELSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLS 141

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +D + +  +E  I  S LGLNP  +G+ L   +P  T+E   A+ KV     E  K 
Sbjct: 142 VTPYDLDALKQLENAIVSSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQ 201

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           S+R  R+  +D +KK+  S    +D+   LE ++ ++T   +K+ +   + K+KEI
Sbjct: 202 SIRRARQKALDXIKKAGSS--LPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255


>gi|225452150|ref|XP_002263449.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296090242|emb|CBI40061.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 99/176 (56%), Gaps = 2/176 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N   +M   +  L +++  LRTGR S  MLD + VE  G  +PL+++A V+VL+P+ L 
Sbjct: 82  ENAMSQMDAAVVALSRELSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLS 141

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +D + +  +E  I  S LGLNP  +G+ L   +P  T+E   A+ KV     E  K 
Sbjct: 142 VTPYDLDALKQLENAIVSSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQ 201

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           S+R  R+  +D +KK+  S    +D+   LE ++ ++T   +K+ +   + K+KEI
Sbjct: 202 SIRRARQKALDMIKKAGSS--LPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEI 255


>gi|196003386|ref|XP_002111560.1| hypothetical protein TRIADDRAFT_55709 [Trichoplax adhaerens]
 gi|190585459|gb|EDV25527.1| hypothetical protein TRIADDRAFT_55709 [Trichoplax adhaerens]
          Length = 247

 Score = 98.2 bits (243), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 103/183 (56%), Gaps = 4/183 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I    +K ++   +  L ++   +   R++P  L+ + V+     VPL Q+  VT   P
Sbjct: 67  MISFSEMKIKLEGIVDGLAREYSNILVSRITPENLNRISVQTNDGKVPLKQLGQVTSTSP 126

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++L +S+    E+V +    I  + L LNPIV+G  L++P+P+ T+E+R  +VK A +  
Sbjct: 127 QLLHISLAAFPEVVNNAAIAIRNAGLNLNPIVDGPSLKVPIPKMTKEQREKIVKTAKSSC 186

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           +K+K+++R +R++ M+ LKK +     SED V   ++ IQ +TD+    +DS F  K  +
Sbjct: 187 DKAKVNIRRVRQNYMNDLKKLK---GVSEDDVYDTKDKIQAMTDNYSNKLDSLFTTKSDD 243

Query: 183 IMH 185
           ++ 
Sbjct: 244 VLR 246


>gi|326532442|dbj|BAK05150.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 260

 Score = 97.4 bits (241), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 2/171 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +  L +++  LRTGR SP MLD + VE     V L+++A V+VL+   L V  +D
Sbjct: 89  QMDTAVVALSRELSKLRTGRASPGMLDHIMVETGDVKVGLSRIAVVSVLDSHTLSVMPYD 148

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              + S+E  I  S LG+NP  +G  +   VP  T+E   A+ KV    AE  K S+R  
Sbjct: 149 PNTMKSIENAIASSPLGINPTPDGSRIIAAVPPLTKETMQAMCKVVTKSAEDFKQSIRRA 208

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R+  +D +KKS  S    +D +  LE +++++T   IK+ D   + K+KEI
Sbjct: 209 RQKALDTIKKS--SSSMPKDDIKRLEKEVEELTKKFIKSADDMCKAKEKEI 257


>gi|326930532|ref|XP_003211400.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Meleagris
           gallopavo]
          Length = 267

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+     M   +  LK+D       R S   LD + V       PLNQ+  ++   P
Sbjct: 87  IINLEETSADMQAVVEALKEDFNRNLNVRTSQGALDHIIVTTKDGKFPLNQLGQISQKSP 146

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           +++VV++ +  E  A+  + I ES + LNP V+G ++R+PVP+ T E R  L K+A    
Sbjct: 147 QLIVVNMINFPESTAAAMKAIRESGMNLNPEVDGTLIRVPVPKVTREHREGLAKLAKQST 206

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            KSK ++R +R   ++ +KK +   K SED +  LE  IQ++ DS    +D     K KE
Sbjct: 207 NKSKEALRKVRSKSINQVKKFK--SKVSEDTIWLLEKQIQQMADSAAAEMDKLLAAKTKE 264

Query: 183 IM 184
           ++
Sbjct: 265 LL 266


>gi|50757135|ref|XP_415395.1| PREDICTED: similar to Mitochondrial ribosome recycling factor
           [Gallus gallus]
          Length = 259

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+     M   +  LK+D       R S   LD + V       PLNQ+  ++   P
Sbjct: 79  IINLEETNTDMQAVVEALKEDFNRNLNVRTSQGALDHIIVTTKDGKFPLNQLGQISQKSP 138

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           +++VV++    E  A+  + I ES + LNP V+G ++R+PVP+ T E R +L K+A    
Sbjct: 139 QLIVVNMTSFPESTAAAMKAIRESGMNLNPEVDGTLIRVPVPKVTREHRESLAKLAKQST 198

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            KSK ++R +R   ++ +KK +   K SED +  LE  IQ++ DS    +D     K KE
Sbjct: 199 NKSKEALRKVRSKSVNQVKKFK--SKVSEDTIWLLEKQIQQMADSAAAEMDKLLAAKTKE 256

Query: 183 IM 184
           ++
Sbjct: 257 LL 258


>gi|292558632|gb|ADE31633.1| Ribosome recycling factor [Streptococcus suis GZ1]
          Length = 120

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/119 (42%), Positives = 78/119 (65%)

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +ER ++ S+LGL P  +G V+R+ +P  TEE R  L K      E SK
Sbjct: 1   MITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKKVGENSK 60

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRRD MD  KK+ K+ + +ED + +LE DIQK+TD  IK ID    +K+KE++ 
Sbjct: 61  VAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKDIQKVTDDAIKTIDKMTADKEKELLE 119


>gi|297710938|ref|XP_002832116.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Pongo
           abelii]
          Length = 262

 Score = 96.7 bits (239), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 98/182 (53%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 82  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+   E R  LVK+A    
Sbjct: 142 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGALIRVPIPQVIREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+  +  + M+ LKKS+ +   SED +   E  I ++ D T+  +D     K KE
Sbjct: 202 NKAKYSLWKVCTNAMNKLKKSKDT--VSEDTIRLTEKQISQMADDTVAELDRHLAVKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|301633271|gb|ADK86825.1| ribosome recycling factor [Mycoplasma pneumoniae FH]
          Length = 185

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 99/179 (55%), Gaps = 4/179 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+       +LK+++  +RTGR +P + D + VE+YG  +P+  +A + V  PR +
Sbjct: 8   LNFFKETADKKFQWLKEELSKIRTGRPNPKLFDNILVESYGDRMPMVALAQIAVNPPREI 67

Query: 67  VVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           V+  +D K  + ++   I  +NLG+ P+++G  +RI  P  T+E RL  +K A    E+ 
Sbjct: 68  VIKPFDVKNNINAIYSEIQRANLGVQPVIDGDKIRINFPPMTQESRLESIKQAKKVVEQI 127

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
              +R++RRD +  +K   K     ED    L+ +++K+    I  +++  ++K+KE++
Sbjct: 128 HQELRSVRRDTLQMIK---KDDHKDEDFEEFLKEEVEKVNKQYIAQLETIQKQKEKELL 183


>gi|226508144|ref|NP_001149112.1| LOC100282734 [Zea mays]
 gi|195624822|gb|ACG34241.1| ribosome recycling factor [Zea mays]
 gi|238015350|gb|ACR38710.1| unknown [Zea mays]
          Length = 259

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 2/171 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +  L +++  LRTGR +P MLD + VE     V LN++A V+VL+   L V  +D
Sbjct: 88  QMDAAVIALSRELSKLRTGRATPGMLDHIMVENADVKVALNRIAVVSVLDAHTLSVMPYD 147

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              + S+E  I  S LG+NP  +G  +   +P  T+E   AL KV    AE  K S+R  
Sbjct: 148 PTSMKSIEHAIISSPLGINPTPDGNRIIAAIPPLTKENIQALCKVVTKSAEDFKQSIRRA 207

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R+  +D +KKS  S    +D V  +E +I+++T   IK+ D   + K+KEI
Sbjct: 208 RQKALDTIKKSASS--MPKDDVKRIEKEIEELTKKFIKSSDDMCKAKEKEI 256


>gi|119607927|gb|EAW87521.1| mitochondrial ribosome recycling factor, isoform CRA_b [Homo
           sapiens]
          Length = 319

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 94/166 (56%), Gaps = 3/166 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 156 IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 215

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 216 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNT 275

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST 168
            K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T
Sbjct: 276 NKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADDT 319


>gi|6091742|gb|AAF03454.1|AC010797_30 putative ribosome recycling factor [Arabidopsis thaliana]
          Length = 284

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 20/189 (10%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   I  L +D+  LRTGR +P MLD + VE  G  +PLN +A V+VL+P+ L V+ +D
Sbjct: 95  QMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYD 154

Query: 73  KEMVASVERGIHESNLGLNPIVEGQ--VLRIPVPETTE-----ERRL-----------AL 114
            + V  +E+ I  S LGLNP ++GQ  V  IP  E++        RL           A+
Sbjct: 155 PDTVKELEKAIVASPLGLNPKLDGQRLVASIPAYESSSLSNFISLRLSLDPIYLYELQAM 214

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
            K+    +E  K S+R  R+  +D +KK+  S    +D V  LE ++ ++T   +K+ + 
Sbjct: 215 CKIVTKSSEVVKQSIRRARQKALDTIKKAGSS--LPKDEVKRLEKEVDELTKKFVKSAED 272

Query: 175 FFEEKKKEI 183
             + K+KEI
Sbjct: 273 MCKSKEKEI 281


>gi|118404150|ref|NP_001072392.1| mitochondrial ribosome recycling factor [Xenopus (Silurana)
           tropicalis]
 gi|111305781|gb|AAI21590.1| mitochondrial ribosome recycling factor [Xenopus (Silurana)
           tropicalis]
          Length = 252

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 95/182 (52%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+++K  M   +  LK+D     + R SP   D + V       PLNQ+  +++  P
Sbjct: 72  IINLEDVKQEMKSILENLKEDFTKNLSIRTSPGAFDHITVTTKDGKFPLNQLGQISLKSP 131

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++ ++++    E   +    + +S + LNP ++G ++R+PVP+ T E R  L K+A    
Sbjct: 132 QLFIINMASFPESATAAVNALRDSQMNLNPELDGTIIRVPVPQVTREHRENLTKLAKQLT 191

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R  R   +  +KK ++    SED+V  LE  IQ++ D     +D     K KE
Sbjct: 192 NKAKDSLRKARTGAVQEVKKCKEG--VSEDIVKLLEKQIQQMADDIATELDKQLATKTKE 249

Query: 183 IM 184
           ++
Sbjct: 250 LL 251


>gi|13508375|ref|NP_110325.1| ribosome releasing factor [Mycoplasma pneumoniae M129]
 gi|2500646|sp|P75161|RRF_MYCPN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|1673870|gb|AAB95854.1| ribosome releasing factor [Mycoplasma pneumoniae M129]
          Length = 184

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 99/179 (55%), Gaps = 4/179 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+       +LK+++  +RTGR +P + D + VE+YG  +P+  +A + V  PR +
Sbjct: 7   LNFFKETADKKFQWLKEELSKIRTGRPNPKLFDNLLVESYGDRMPMVALAQIAVNPPREI 66

Query: 67  VVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           V+  +D K  + ++   I  +NLG+ P+++G  +RI  P  T+E RL  +K A    E+ 
Sbjct: 67  VIKPFDVKNNINAIYSEIQRANLGVQPVIDGDKIRINFPPMTQESRLESIKQAKKVVEQI 126

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
              +R++RRD +  +K   K     ED    L+ +++K+    I  +++  ++K+KE++
Sbjct: 127 HQELRSVRRDTLQMIK---KDDHKDEDFEEFLKEEVEKVNKQYIAQLETIQKQKEKELL 182


>gi|126294057|ref|XP_001364967.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 262

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 98/182 (53%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ +   M   +  LK +       R SP  LD + V        LN +  +++  P
Sbjct: 82  IICLEEVDVEMKSVVEALKDNFNKNLNIRTSPGSLDHITVTTGDGKFALNHIGQISLKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++ +  E  A+  + I ES + LNP V+G V+R+P+P+ T E R  LVK+A    
Sbjct: 142 QLILVNMTNFPECTAAAIKAIRESGMNLNPEVDGTVIRVPIPKVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K ++R +R + M+ LKKS+ S   +ED +  +E  I ++ D T+  +D     K KE
Sbjct: 202 NKAKDNLRKVRTNAMNKLKKSKDS--VAEDTIKLIEKQIGQMADDTVAEMDKHLALKTKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|149019535|ref|ZP_01834854.1| ribosome recycling factor [Streptococcus pneumoniae SP23-BS72]
 gi|147930910|gb|EDK81890.1| ribosome recycling factor [Streptococcus pneumoniae SP23-BS72]
          Length = 111

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 68/108 (62%)

Query: 79  VERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMD 138
           +ER ++ S LG+ P  +G V+R+ +P  TEE R  L K      E +K++VRNIRRD MD
Sbjct: 4   IERALNASELGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRDAMD 63

Query: 139 HLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
             KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 64  EAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLEV 111


>gi|309800201|ref|ZP_07694384.1| ribosome recycling factor [Streptococcus infantis SK1302]
 gi|308116172|gb|EFO53665.1| ribosome recycling factor [Streptococcus infantis SK1302]
          Length = 111

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 68/108 (62%)

Query: 79  VERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMD 138
           +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K+++RNIRRD MD
Sbjct: 4   IERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAIRNIRRDAMD 63

Query: 139 HLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
             KK  K+ + +ED + +LE DIQK TD  +K+ID     K+KEI+  
Sbjct: 64  EAKKQEKAKEITEDELKTLEKDIQKATDDAVKHIDEMTANKEKEILEV 111


>gi|72063711|ref|XP_792740.1| PREDICTED: similar to Mitochondrial ribosome recycling factor
           [Strongylocentrotus purpuratus]
 gi|115959633|ref|XP_001188854.1| PREDICTED: similar to Mitochondrial ribosome recycling factor
           [Strongylocentrotus purpuratus]
          Length = 188

 Score = 94.7 bits (234), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 100/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++DL ++K+ M + I  LKKD  +  T R S   LD + V       PLNQ+  +T  
Sbjct: 5   DDILDLNDVKENMQNAIDALKKDYTSTLTIRTSQGALDHLLVITPDGKFPLNQLGQMTSK 64

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
               + V++ +  +   +  + I ++ + LNP +EG V+++P+P+ T+E R  LVK A  
Sbjct: 65  SSSSITVNLTNFPQATEAAAKAIRDAGMNLNPKIEGSVIQVPIPKVTKEHRENLVKSAKG 124

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             +K+K+++R  R   +  ++K ++    S+D +  LE  I ++TD+   + D  F  K 
Sbjct: 125 MCDKAKVNIRGARSKYISLVRKHKEG--TSKDTIFRLEQQIHQVTDTFNDSADKLFSLKT 182

Query: 181 KEIM 184
           KE++
Sbjct: 183 KELL 186


>gi|12045295|ref|NP_073106.1| ribosome recycling factor [Mycoplasma genitalium G37]
 gi|1350904|sp|P47673|RRF_MYCGE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|3845028|gb|AAC72456.1| ribosome recycling factor [Mycoplasma genitalium G37]
 gi|166079045|gb|ABY79663.1| ribosome recycling factor [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 183

 Score = 94.4 bits (233), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 99/168 (58%), Gaps = 5/168 (2%)

Query: 18  ISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMV 76
           I +LK+++  +RTGR +P + D + +E+YG  +PL  +A VT+  PR +++  +D K   
Sbjct: 18  IQWLKEELTKIRTGRPNPKIFDNLLIESYGQKMPLISLAQVTINPPREIIIKPFDPKSNT 77

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
            ++   I  +N+G+ P+++G+ +R+  P+ T+E RL  +K      E+    +R +RRD 
Sbjct: 78  NAIYSEIQRANIGVQPVIDGEKIRVNFPQITQETRLENIKHVKKIIEQIYQELRVVRRDA 137

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +  +KK       +ED+  SL+ +I+KI  +    ++   ++K+KE++
Sbjct: 138 LQMIKKDN----HNEDLENSLKAEIEKINKNYSNQLEEIQKDKEKELL 181


>gi|15828690|ref|NP_326050.1| ribosome recycling factor (ribosome releasing factor) [Mycoplasma
           pulmonis UAB CTIP]
 gi|22001949|sp|Q98QZ1|RRF_MYCPU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|14089632|emb|CAC13392.1| RIBOSOME RECYCLING FACTOR (RIBOSOME RELEASING FACTOR) [Mycoplasma
           pulmonis]
          Length = 187

 Score = 94.4 bits (233), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 100/176 (56%), Gaps = 2/176 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++++  + +S  + ++  + TGR +P ++  +KV  Y   +PL Q++N++V EP+ L++ 
Sbjct: 13  LEEKSMNVVSNFEFNLSKISTGRANPQLIKNIKVSYYEELIPLEQISNISVPEPQQLLIK 72

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D  +   + + +  +NL +  + EG  +R+  P    +RR  LVK  + + E++++S+
Sbjct: 73  PFDHNITKEIHKSLLLANLDVAIVNEGNQIRLNFPALNTQRRKELVKSLNKFTEQARVSI 132

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R +R++    +K  +   + SED +   E  IQ I DS I+ ID   + K++E+M 
Sbjct: 133 RLLRQESNKKIKSFK--SEISEDDIKKYETKIQTINDSYIEQIDEITKRKERELME 186


>gi|301094211|ref|XP_002997949.1| ribosome-recycling factor, putative [Phytophthora infestans T30-4]
 gi|262109735|gb|EEY67787.1| ribosome-recycling factor, putative [Phytophthora infestans T30-4]
          Length = 259

 Score = 94.0 bits (232), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 3/173 (1%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K+  G  ++F +  +  +R GR    + D + V AYG HVPL QVA V V     L V+V
Sbjct: 87  KNMNGAVVNFTRA-LSQMRPGRADAGIFDELHVPAYGQHVPLAQVAQVAVAGTHALSVTV 145

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D  ++  V++ I  +N   +   +   L I  P+ ++E R  L+K     AE+++  VR
Sbjct: 146 YDPSLMPDVKKAIEGTNAVYSVREDVSSLEISFPKMSKETRADLLKATKKQAEQARQHVR 205

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +R+D M+H KK + +   SED V   +  IQK TDS I  ID     K+K++
Sbjct: 206 RVRQDAMNHAKKLKDA--VSEDDVEVQKERIQKATDSAIAEIDKLLAAKEKDL 256


>gi|261749578|ref|YP_003257264.1| ribosome recycling factor [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497671|gb|ACX84121.1| ribosome recycling factor [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 184

 Score = 94.0 bits (232), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 95/165 (57%), Gaps = 5/165 (3%)

Query: 21  LKKDMMTLRTGRVSP-SMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASV 79
           L++++  +R G  S   +L+ +K++ Y S  PL +VA +T+++   + +  WD+ +++ +
Sbjct: 22  LQEEIHRIRLGSKSVVPLLEKIKIKCYASFFPLIEVATITIVDNMNITIHPWDRAIISYI 81

Query: 80  ERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDH 139
           ++ I + NLG  P  +G+ + I +P  TEE R  L+K      EK+KI VR  R+     
Sbjct: 82  DKAIIDENLGFMPTNKGESIHIRLPILTEEGRKNLMKKIKTQTEKAKIFVRTTRK----K 137

Query: 140 LKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
             +S K  K SED+    EN IQKIT  +I+ ID  F  K+KEI+
Sbjct: 138 YNQSIKRLKISEDLSKIGENRIQKITKVSIQKIDVLFFSKEKEIL 182


>gi|308190230|ref|YP_003923161.1| ribosome recycling factor [Mycoplasma fermentans JER]
 gi|319777597|ref|YP_004137248.1| ribosome-recycling factor [Mycoplasma fermentans M64]
 gi|238810012|dbj|BAH69802.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|307624972|gb|ADN69277.1| ribosome recycling factor [Mycoplasma fermentans JER]
 gi|318038672|gb|ADV34871.1| Ribosome-recycling factor [Mycoplasma fermentans M64]
          Length = 183

 Score = 94.0 bits (232), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 94/162 (58%), Gaps = 5/162 (3%)

Query: 24  DMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGI 83
           ++  + TGR +P ++  V++  Y +  PL ++A++TV EP+ L++  +D      + + I
Sbjct: 24  ELSKISTGRANPQLIKGVRINYYDTLTPLEELASITVPEPQQLLIKPFDVSCNHEIAKTI 83

Query: 84  HESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKS 143
             +NLGLNP+ EG  +RI  P  T ERR  +VK    + E +K+++RN R++    + KS
Sbjct: 84  LNANLGLNPVDEGNQVRITFPPLTTERRKDMVKSLAKFTENAKVAIRNARQN----VNKS 139

Query: 144 RKSGKA-SEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            K+ +  SED      ++IQK  D  I++I+     K+KE+M
Sbjct: 140 IKADEELSEDQEKKYLDEIQKEVDKKIEHINKMTINKEKELM 181


>gi|149641896|ref|XP_001512325.1| PREDICTED: similar to mitochondrial ribosome recycling factor
           [Ornithorhynchus anatinus]
          Length = 241

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 99/182 (54%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ +   +   +  LK D       R S   LD + V        LNQ+A +++  P
Sbjct: 61  IINLEEVNRDLQTVMEALKDDFNKNLNIRTSAGALDHISVPTEDGKFSLNQLAQISMKSP 120

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++ +  E  A+  + I ES + LNP V+G ++R+P+P+ T E R  LVK+A    
Sbjct: 121 QLVLVNMANFPECTAAAIKAIRESGMNLNPEVDGTIIRVPIPKVTREHREMLVKLAKQNT 180

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+R +R + M+ LKKS+   K +ED +  +E  I ++ D  +  +D     K KE
Sbjct: 181 NKAKESLRKVRTNAMNKLKKSK--DKVAEDTIRLIEKKIGQMADDMVAEMDKQLAVKTKE 238

Query: 183 IM 184
           ++
Sbjct: 239 LL 240


>gi|224055693|ref|XP_002298606.1| predicted protein [Populus trichocarpa]
 gi|222845864|gb|EEE83411.1| predicted protein [Populus trichocarpa]
          Length = 273

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 2/171 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +  L +++  LRTGR S  MLD + VE  G  +PLN+ A V+V++ + L V+ +D
Sbjct: 102 QMDAAVVALSRELQKLRTGRASAGMLDHIIVETDGVKLPLNRSAVVSVMDAKTLSVNPYD 161

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              +  +E  I  S LGLNP  +G  L   +P  T+E   A+ KV     E  + S+R  
Sbjct: 162 PNTLKQLENAIVSSPLGLNPQRDGDRLIAAIPPLTKEHTQAMCKVVAKSCEDCRQSIRRA 221

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R+  MD +KK+  S    +D    LE +I+++T   +K+ +     K+KEI
Sbjct: 222 RQKAMDTVKKAGSS--FPKDDAKKLEKEIEEMTKKFVKSAEDMCNNKEKEI 270


>gi|325181721|emb|CCA16176.1| ribosomerecycling factor putative [Albugo laibachii Nc14]
          Length = 267

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 100/184 (54%), Gaps = 7/184 (3%)

Query: 5   IDLQNIKDR----MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
            D++ +K +    M   I    + +  +R G+    + D V V+AYG  VPL Q+A V V
Sbjct: 85  FDVEELKSKTRRNMNGAILNFTRQLCQMRPGKADGGIFDTVHVQAYGQSVPLPQLAQVAV 144

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
                L V+V+D+ ++  V++ I + N   +   E   L +  P+ ++E R  L K    
Sbjct: 145 TGAYSLSVNVYDQSLLQEVKQTIAKINACYSIREEISSLEVTFPKMSKETRSELSKAVKK 204

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+++  VR +R+D M+ LKKS+   + +ED +  +++ IQK+TD  I  IDS   +K+
Sbjct: 205 QAEQARSHVRRVRQDSMNILKKSK---EITEDDLKEIKDAIQKVTDQCISEIDSLLAQKE 261

Query: 181 KEIM 184
           K+++
Sbjct: 262 KDLV 265


>gi|291000412|ref|XP_002682773.1| predicted protein [Naegleria gruberi]
 gi|284096401|gb|EFC50029.1| predicted protein [Naegleria gruberi]
          Length = 174

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 103/175 (58%), Gaps = 5/175 (2%)

Query: 13  RMGDTISFLKKDMMTLRTGR-VSPSMLDLVKVEAYG-SHVPLNQVANVTVLEPRMLVVSV 70
           +M   +   +K +  LR+G   +PS+++ V +     S  PL  +A++ V  P+ L ++V
Sbjct: 1   KMDKFVQSSQKQLSELRSGSGANPSLVENVMITMNDDSKRPLKSLASIVVKNPKCLTLNV 60

Query: 71  WDKEMVASVERGIHESNLGLNPI-VEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           +DK    ++ + I   +LGLNP  +    + IP+P+ T+E R  +VK A   AE +K  +
Sbjct: 61  FDKTTTGAISKSIASEDLGLNPQQINENSIDIPIPKMTKEMRENVVKNAKKIAEGAKDKI 120

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R++RR+GM  + K++K G AS+D +   E  +QK+TD  I  ID+  ++K+KEIM
Sbjct: 121 RDLRRNGMTKI-KAQKEG-ASKDDIFHDEQVLQKLTDDMITKIDNLVDQKEKEIM 173


>gi|28493413|ref|NP_787574.1| ribosome recycling factor [Tropheryma whipplei str. Twist]
 gi|28572476|ref|NP_789256.1| ribosome recycling factor [Tropheryma whipplei TW08/27]
 gi|44888329|sp|Q83G73|RRF_TROWT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|44888330|sp|Q83HZ5|RRF_TROW8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|28410608|emb|CAD66994.1| ribosome recycling factor [Tropheryma whipplei TW08/27]
 gi|28476454|gb|AAO44543.1| ribosome recycling factor [Tropheryma whipplei str. Twist]
          Length = 181

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 101/182 (55%), Gaps = 12/182 (6%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++ +RM  TI  LK+  +++ +GRV+    + V V+  G+ VPL  +A++ VL    +VV
Sbjct: 8   DVSERMNKTIELLKEQFLSIHSGRVNSGQFEKVMVDCEGASVPLVSLASIRVLNANTIVV 67

Query: 69  SVWDKEMVASVERGIHE-SNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           + +D  +++ ++R +    N+G  P  +G+ ++I +P+ TE RR   VK A   AE++++
Sbjct: 68  TPYDSALLSQIDRALRNVPNIG-TPGNDGECIKIVMPQLTEARRHEYVKQARVKAEEARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKA---SEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S RNIRR       K+R S  A   ++D +   E ++ K+T   I  +D     K+ E++
Sbjct: 127 SARNIRR-------KARASLDAMGLAKDEIVRREKELDKLTKDVISVVDDLLRHKESELL 179

Query: 185 HF 186
             
Sbjct: 180 RL 181


>gi|294155890|ref|YP_003560274.1| ribosome recycling factor [Mycoplasma crocodyli MP145]
 gi|291600515|gb|ADE20011.1| ribosome recycling factor [Mycoplasma crocodyli MP145]
          Length = 183

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 96/180 (53%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  I+D     I+  K ++  + TGR +P ++  ++V  Y +  PL +++N++V EP+ L
Sbjct: 7   LLEIEDAAQKAINHYKFELSKMSTGRANPQIIKGIRVTYYDTPTPLEELSNISVPEPQQL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   V  + + +  +NLG+ P+ EG  +R+  P  T ERR  +VK    Y E +K
Sbjct: 67  LIKPYDISSVRDIVKALTNANLGILPVDEGHQIRMTFPTLTTERRKEIVKSLSKYTEAAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN R+D    +K      + SED+       IQK  D   + I+   +EK+ ++M  
Sbjct: 127 VTIRNARQDVNKSIKNDE---ELSEDIEKRYLEAIQKEVDKYTEIINDLTKEKENDLMKL 183


>gi|311246344|ref|XP_003122165.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 2
           [Sus scrofa]
          Length = 210

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 87/148 (58%), Gaps = 3/148 (2%)

Query: 38  LDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEG 96
           LD + V      + LNQ+  +++  P++++V++    E  A+  + I ES + LNP VEG
Sbjct: 64  LDQITVVTADGKLALNQIGQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPDVEG 123

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
            ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+   KASED +  
Sbjct: 124 TLIRVPIPKVTREHREMLVKLAKQNTNKAKESLRKVRTNAMNKLKKSK--DKASEDTLRL 181

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +E  I ++ D T+  ++     K KE++
Sbjct: 182 IEKQISQMADDTVAELERHLAVKTKELL 209


>gi|332229927|ref|XP_003264138.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 4
           [Nomascus leucogenys]
          Length = 210

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 3/148 (2%)

Query: 38  LDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEG 96
           LD + V      + LNQ++ +++  P++++V++    E  A+  + I ES + LNP VEG
Sbjct: 64  LDKIAVVTADGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEG 123

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
            ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+ +   SED +  
Sbjct: 124 TLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRL 181

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +E  I ++ D T+  +D     K KE++
Sbjct: 182 IEKQISQMADDTVAELDRHLAVKTKELL 209


>gi|291042689|ref|NP_001166983.1| ribosome-recycling factor, mitochondrial isoform 3 precursor [Homo
           sapiens]
 gi|221043312|dbj|BAH13333.1| unnamed protein product [Homo sapiens]
          Length = 210

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 3/148 (2%)

Query: 38  LDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEG 96
           LD + V      + LNQ++ +++  P++++V++    E  A+  + I ES + LNP VEG
Sbjct: 64  LDKIAVVTADGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEG 123

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
            ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+ +   SED +  
Sbjct: 124 TLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRL 181

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +E  I ++ D T+  +D     K KE++
Sbjct: 182 IEKQISQMADDTVAELDRHLAVKTKELL 209


>gi|27365210|ref|NP_760738.1| ribosome recycling factor [Vibrio vulnificus CMCP6]
 gi|27361357|gb|AAO10265.1| Ribosome recycling factor [Vibrio vulnificus CMCP6]
          Length = 104

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 64/97 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PL QVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNSLSKVRTGRAHPSLLSGISVDYYGAATPLTQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVP 104
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTVIRVPLP 103


>gi|328479954|gb|EGF49002.1| ribosome recycling factor [Lactobacillus rhamnosus MTCC 5462]
          Length = 129

 Score = 91.3 bits (225), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 46/115 (40%), Positives = 75/115 (65%), Gaps = 2/115 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQ+I+    K  MG T   L++++  +R GR + S+L+ + V+ YG+  PLNQ+A +TV 
Sbjct: 3   NQIIE--QAKVNMGKTEESLQRELGNIRAGRANASLLNQITVDYYGAPTPLNQMAAITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVK 116
           E R+L +S +DK  + ++E  I+ S+LG+NP  +G V+R+ +P+ T ERR  L K
Sbjct: 61  EARVLQISPYDKSSLKNIETAINASDLGINPANDGDVIRLVIPQLTGERRKELPK 115


>gi|332229925|ref|XP_003264137.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 3
           [Nomascus leucogenys]
          Length = 284

 Score = 91.3 bits (225), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 3/148 (2%)

Query: 38  LDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEG 96
           LD + V      + LNQ++ +++  P++++V++    E  A+  + I ES + LNP VEG
Sbjct: 138 LDKIAVVTADGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEG 197

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
            ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+ +   SED +  
Sbjct: 198 TLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRL 255

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +E  I ++ D T+  +D     K KE++
Sbjct: 256 IEKQISQMADDTVAELDRHLAVKTKELL 283


>gi|159478729|ref|XP_001697453.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158274332|gb|EDP00115.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 175

 Score = 91.3 bits (225), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 100/179 (55%), Gaps = 9/179 (5%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM   ++ +     T+RTGR +P++LD + V+ +G+  PL Q+  VTV +   L+++ +
Sbjct: 2   ERMKKCLAVVGDGFNTIRTGRANPAILDKITVDYFGAPTPLKQMGTVTVPDASTLMITPF 61

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH-AYAEKSKISVR 130
           DK  +  +ER I ES++G+NP  +G+ +R+ +P  T+ RR      AH  +A  + ++V 
Sbjct: 62  DKTSLRDIERAIQESDIGINPNNDGERIRLIMPPMTQVRRR---DGAHLVWAGGAGVAV- 117

Query: 131 NIRRDGMDHLKKSRKSGKASE---DMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            ++  G    K         E   D   +LE+DIQK+TD+ +K ++   + K +E+M  
Sbjct: 118 -VQACGTSTEKPPHPPPDTVELPKDDKKALEDDIQKLTDTYVKKVEDAAKAKTEEVMKL 175


>gi|260810957|ref|XP_002600189.1| hypothetical protein BRAFLDRAFT_204166 [Branchiostoma floridae]
 gi|229285475|gb|EEN56201.1| hypothetical protein BRAFLDRAFT_204166 [Branchiostoma floridae]
          Length = 206

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           ++V D++ ++ +M   +  LK++ +   + R S   LD + V+      PLN +  + + 
Sbjct: 24  SEVTDIETVRGKMQKALDALKEEYVKNLSLRTSVGSLDSISVQTVNGRFPLNHLGQIVMK 83

Query: 62  EPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P+M  V+ V   + + SV + I +S + LNPI EG V+++P+P+ T+E R  L K A A
Sbjct: 84  SPQMYHVNMVGAPQEIPSVLQAISQSGMNLNPIQEGNVIKVPIPKVTKEHRENLAKKAKA 143

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K  +R+IR   M   KK++ +   SED V  +E  IQ++TD    N +   E K 
Sbjct: 144 GCNKTKEQIRDIRNQAMKEAKKAKAT--VSEDTVRLVEKQIQQLTDDFNGNAEKILEAKS 201

Query: 181 KEIM 184
           KE++
Sbjct: 202 KELL 205


>gi|332832794|ref|XP_003312315.1| PREDICTED: ribosome-recycling factor, mitochondrial [Pan
           troglodytes]
          Length = 284

 Score = 91.3 bits (225), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 87/148 (58%), Gaps = 3/148 (2%)

Query: 38  LDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEG 96
           LD + V      + LNQ++ +++  P++++V++    E  A+  + I ES + LNP VEG
Sbjct: 138 LDKIAVVTADGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEG 197

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
            ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+ +   SED +  
Sbjct: 198 TLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVRTNSMNKLKKSKYT--VSEDTIRL 255

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +E  I ++ D T+  +D     K KE++
Sbjct: 256 IEKQISQMADDTVAELDRHLAVKTKELL 283


>gi|145349027|ref|XP_001418942.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579172|gb|ABO97235.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 238

 Score = 90.5 bits (223), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 4/179 (2%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D +  + +    +  L  D+  LRT R S  M+D + V+ YG   PL+ +  +T    + 
Sbjct: 62  DAKEWQSKFDAALHALDVDLSQLRTARASAGMIDHIIVDVYGEPTPLSHLGTITAPNAQT 121

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L V+++D     SVE+ I  S LG  P      L +P+P  T++ R  + K+A    E +
Sbjct: 122 LSVTLFDPSTKPSVEKAIVNSPLGFVPKESSDGLIVPIPAMTQDTRKEVCKLASKLGETA 181

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KI+ RNIR      +K++    + SED     E ++Q +TD  +  I      K+KEIM
Sbjct: 182 KIAARNIRHKAQKRIKRA----EMSEDDRKRAEKNLQALTDDIVGKITQRCAAKEKEIM 236


>gi|240047787|ref|YP_002961175.1| Ribosome recycling factor [Mycoplasma conjunctivae HRC/581]
 gi|239985359|emb|CAT05372.1| Ribosome recycling factor [Mycoplasma conjunctivae]
          Length = 186

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 4/165 (2%)

Query: 21  LKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE 80
           L K+   +  GR +P ++  ++V+ YG+  P+N++AN++V     L+V  +D  ++ S+ 
Sbjct: 25  LDKNFNKINIGRANPQIISHIRVDYYGAPTPINEIANISVPSALQLLVKPYDISLINSIT 84

Query: 81  RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
             +    +      E   +R+  PE T E+R  LVK    Y E++K+ +R IR+D    +
Sbjct: 85  STLVAHKIEAQIQKEANQIRLVFPELTTEKRKELVKSIKKYEEEAKVKIRLIRQDVNKLI 144

Query: 141 KKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           KK       SED   +  N IQK  DS IK ID  FEEK K +++
Sbjct: 145 KKE----DLSEDEEKNYLNQIQKTIDSKIKEIDKIFEEKSKLLLN 185


>gi|194246630|ref|YP_002004269.1| ribosome recycling factor [Candidatus Phytoplasma mali]
 gi|193806987|emb|CAP18422.1| Ribosome recycling factor [Candidatus Phytoplasma mali]
          Length = 185

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 110/187 (58%), Gaps = 7/187 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN++  L N++++M  +   + K++ ++RT   +P++LD + +  YG ++ L Q+++++V
Sbjct: 5   MNEI--LTNVENKMQKSSIEMLKELSSIRTDISNPNVLDKININYYGENISLKQLSSISV 62

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNP-IVEGQVLRIPVPETTEERRLALVKVAH 119
           +E   L +  +D ++   +++ I  S+LG+NP +V   ++++  P  TEERR +L+K   
Sbjct: 63  VEGNQLNIKPYDIKITDQIKKAILASDLGINPEVVNNSLIKLIFPPLTEERRKSLIKQVE 122

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             +E  K+ +RNIRR+G + +    K+   ++D+        Q +TD  I+ I+    +K
Sbjct: 123 KISENVKVVIRNIRREGNNKI----KTMILTKDLELLFLKKNQILTDKYIELIEKQTNDK 178

Query: 180 KKEIMHF 186
           KKE++  
Sbjct: 179 KKELLKI 185


>gi|312876745|ref|ZP_07736724.1| ribosome recycling factor [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796476|gb|EFR12826.1| ribosome recycling factor [Caldicellulosiruptor lactoaceticus 6A]
          Length = 108

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/100 (44%), Positives = 66/100 (66%)

Query: 86  SNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRK 145
           S+LG+NP  +G+V+R+  PE TEERR  LVK     AE +K+++RNIRR+ +D  KK +K
Sbjct: 8   SDLGVNPTNDGKVIRLIFPELTEERRKELVKQVKKMAEDAKVAIRNIRREALDEYKKMKK 67

Query: 146 SGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           + + +ED +   E D+QK+ D  I+ I+     K+KEIM 
Sbjct: 68  NNEITEDDLKDAEEDVQKLHDKYIEQIEKLLSAKEKEIME 107


>gi|281337698|gb|EFB13282.1| hypothetical protein PANDA_004028 [Ailuropoda melanoleuca]
          Length = 238

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 3/159 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ + + M   +  LK +       R SP  LD + V      + LNQ+  +++  P
Sbjct: 82  IISLEEVDEEMKSVMEALKDNFNKTVNIRTSPGSLDHITVVTADGKLALNQIGQISMKSP 141

Query: 64  RMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V+ V   E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QLILVNMVSFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
            K+K S+R +R + M+ LKKS+   K SED +  +E  +
Sbjct: 202 NKAKDSLRKVRTNAMNKLKKSK--DKVSEDTIRLIEKQV 238


>gi|147799481|emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera]
          Length = 222

 Score = 88.6 bits (218), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 75/119 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +++K+RM  TI  ++ +  ++RTGR +P++LD V+VE YG+ V L  +A ++  +   L+
Sbjct: 96  KDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLL 155

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V  +DK  +  +E+ I  S+LGL P  +G+V+R+ +P+ T ERR  L KV     E+ K
Sbjct: 156 VQPYDKSSLKVIEKAIVSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGK 214


>gi|156385498|ref|XP_001633667.1| predicted protein [Nematostella vectensis]
 gi|156220740|gb|EDO41604.1| predicted protein [Nematostella vectensis]
          Length = 191

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 5/184 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D   IK  M  TI  LK+D  +  T ++ P  LD ++V        L ++A + +   
Sbjct: 10  LVDFSKIKANMESTIDKLKQDYTSKITVQILPDALDNIRVTTRSGKSTLAELAEIRMKGD 69

Query: 64  RMLVV--SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
            M V+  S   K+  A+ +  I ES +   P+V+   + I +P+ T+E R  LVK+A   
Sbjct: 70  NMFVIDMSSSPKDTKAAAQ-AIKESRINFEPVVDNTTITISIPKVTQEYRQDLVKLARQA 128

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E+SK ++R +R+ GM  ++K+ K G+ SED V  +E  IQ++TD    + D   EEK K
Sbjct: 129 CEQSKQNLRRVRQKGMADVRKN-KQGR-SEDEVKQVEKMIQQLTDEYSSDTDLLVEEKTK 186

Query: 182 EIMH 185
           E++ 
Sbjct: 187 ELLR 190


>gi|223994925|ref|XP_002287146.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976262|gb|EED94589.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 179

 Score = 87.8 bits (216), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 8/175 (4%)

Query: 18  ISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVA 77
           I+ L++   ++R G  +  + D V+V AYG  VPL+ V  V + +P+   +S +D  +  
Sbjct: 5   IASLERSFSSIRGGEATAELFDAVRVSAYGETVPLSSVGQVVIEDPQRATISCYDPSVSN 64

Query: 78  SVERGIHE-SNLGLNPIVE---GQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            V   + +   + LNP VE     V+ +P+P  +EE R  +VK     AE  +  VR IR
Sbjct: 65  DVRDAVRDMPGMNLNPYVEEGGSGVVIVPIPRVSEETRKEIVKELGRQAENGRQRVRKIR 124

Query: 134 RDGMDHLKKSRKSGK---ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R+ MD +KK  K GK    S+D    +  D++ +T+  +  ++   E+K+K +M 
Sbjct: 125 REAMDVVKKG-KDGKLEGISKDDAFRVGKDVEGVTEEVLAVLNDIVEKKQKSVME 178


>gi|149038905|gb|EDL93125.1| rCG45505 [Rattus norvegicus]
          Length = 239

 Score = 87.8 bits (216), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 3/159 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ + + M   +  LK +       R +P  LD + V      + LNQ+  +++  P
Sbjct: 82  IISLEEVDEDMKSVMEALKDNFNKTLNIRTAPGSLDHITVVTADGKLALNQIGQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
            K+K ++R +R + M+ LKKS+   K SED +  +E  I
Sbjct: 202 NKAKENLRKVRTNAMNKLKKSK--DKTSEDTIRLIEKQI 238


>gi|114690061|ref|XP_521248.2| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 gi|332861573|ref|XP_003317710.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Pan
           troglodytes]
          Length = 262

 Score = 87.8 bits (216), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 94/182 (51%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I   K +       R SP  LD + V      + LNQ+  ++V  P
Sbjct: 82  IINLEEVNEEMKSVIEAHKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQIRQISVKLP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E   +  + I ES + LNP VEG ++R+P+P+   E R  LVK+A    
Sbjct: 142 QLILVNMASFPECTVAAIKAIRESGMNLNPEVEGTLIRVPIPQVIREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+K S+  +  + M+ LKKS+ +   SED +   E  I ++ D T+  +      K KE
Sbjct: 202 NKAKYSLLKVCTNAMNKLKKSKDT--VSEDTIRLTEKQISQMADDTVAELYRHLAVKNKE 259

Query: 183 IM 184
           ++
Sbjct: 260 LL 261


>gi|255660062|ref|ZP_05405471.1| ribosome recycling factor [Mycoplasma genitalium G37]
          Length = 161

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 87/147 (59%), Gaps = 5/147 (3%)

Query: 18  ISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMV 76
           I +LK+++  +RTGR +P + D + +E+YG  +PL  +A VT+  PR +++  +D K   
Sbjct: 18  IQWLKEELTKIRTGRPNPKIFDNLLIESYGQKMPLISLAQVTINPPREIIIKPFDPKSNT 77

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
            ++   I  +N+G+ P+++G+ +R+  P+ T+E RL  +K      E+    +R +RRD 
Sbjct: 78  NAIYSEIQRANIGVQPVIDGEKIRVNFPQITQETRLENIKHVKKIIEQIYQELRVVRRDA 137

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQK 163
           +  +KK       +ED+  SL+ +I+K
Sbjct: 138 LQMIKKD----NHNEDLENSLKAEIRK 160


>gi|148676726|gb|EDL08673.1| mCG22269 [Mus musculus]
          Length = 237

 Score = 87.4 bits (215), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 3/156 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ + + M   +  LK +       R +P  LD + V      V LNQ+  +++  P
Sbjct: 82  IISLEEVDEDMKSVVEALKDNFNKTLNIRTAPGSLDHITVVTADGKVALNQIGQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QVILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLE 158
            K+K ++R +R + M+ LKKS+   K SED +  +E
Sbjct: 202 NKAKENLRKVRTNAMNKLKKSK--DKTSEDTIRLIE 235


>gi|159490140|ref|XP_001703044.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158270857|gb|EDO96689.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 277

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 17/188 (9%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEA------YGSHVPLNQVA 56
           Q  D++    +MG+ +  L++ +  +RTGR SP +L+ V VEA      +G HVPL  + 
Sbjct: 96  QEWDIEPFVTQMGEALDHLRRKLAGIRTGRASPGLLEAVSVEARSSGSSHGPHVPLRVLG 155

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVE-GQVLRIPVPETTEERRLALV 115
            V    P++LV    D + VA   + I  S L L    E G+VL +PVP  + E     V
Sbjct: 156 TVVARGPQLLV----DDKAVA---KAIQNSPLKLQARAENGEVL-VPVPRLSLEMVKGFV 207

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           K+A   AE ++ +VR +R   ++  K     G A E  +  +E  +Q +TD  I+ +D  
Sbjct: 208 KLAAQEAEAARKAVRAVRHRALEQAKLCNTGGPAGE--LKRMEQQVQALTDKHIREVDGL 265

Query: 176 FEEKKKEI 183
              K++++
Sbjct: 266 LRAKERDL 273


>gi|119632273|gb|EAX11868.1| hCG1980694, isoform CRA_a [Homo sapiens]
          Length = 262

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 5/183 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDM-MTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           +I+L+ + + M   I   K +   TL  G  SP  LD + V      + LNQ+  ++V  
Sbjct: 82  IINLEEVNEEMKSVIEARKDNFNKTLNIG-TSPGSLDKIAVVTADGKLALNQIRQISVKL 140

Query: 63  PRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           P++++V++    E   +  + I ES + LNP VEG ++R+P+P+   E R  LVK+A   
Sbjct: 141 PQLILVNMASFPEFTVAAIKAIRESGMNLNPEVEGTLIRVPIPQVIREHREMLVKLAKQN 200

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
             K+K S+R +  + M+ LKKS+ +   SE  +   E  I ++ D T+  +      K K
Sbjct: 201 TNKAKYSLRKVCTNAMNKLKKSKDT--VSEGTIRLTEKQISQMADDTVAELYRHLAVKTK 258

Query: 182 EIM 184
           E++
Sbjct: 259 ELL 261


>gi|269115236|ref|YP_003302999.1| ribosome recycling factor [Mycoplasma hominis]
 gi|268322861|emb|CAX37596.1| Ribosome recycling factor (Ribosome releasingfactor)(RRF)
           [Mycoplasma hominis ATCC 23114]
          Length = 183

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 100/178 (56%), Gaps = 3/178 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  + + +  +I   +  +M +  GR +P ++  +K+E YGS + + ++A++T   P  L
Sbjct: 7   LLELDEEISKSIVNYENQLMKVVIGRANPVLISKIKLEYYGSPISVEEIASITTSGPLQL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +D  ++ ++E+ I ++ + ++ I EG  LR+  P+ T E+R+ + K   +  E+++
Sbjct: 67  IVKPYDMSVLKNIEKAIMDNKINVSIINEGHQLRLQYPQMTTEKRVEMTKQLASITEQAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I VR  R+D     KK +     SED+     ++IQK  D +I+ I+   + K+KE++
Sbjct: 127 IGVRQARQDIN---KKIKADSDLSEDIQKHYLDNIQKEVDKSIEKINEMSKTKEKELL 181


>gi|148670215|gb|EDL02162.1| mCG10533, isoform CRA_b [Mus musculus]
          Length = 264

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 3/179 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ + + M   +  LK +       R +   LD + V      V L+Q+  +++  P
Sbjct: 82  IISLEEVDEDMKSVMEALKDNFNRTLNIRTASGSLDHITVVTADGKVALSQIGQISMKSP 141

Query: 64  RMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I  S + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QVILVNMAIFPECTAAAIKAIRGSRMNLNPEVEGTLIRVPIPKLTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            K+K ++R +  + M+ LKKS+   K SED +  +E  I +I D T+  +D     + K
Sbjct: 202 NKAKENLRKVCTNAMNKLKKSK--DKTSEDTIRLMEKQISQIADDTVAELDQHLAARPK 258


>gi|148670214|gb|EDL02161.1| mCG10533, isoform CRA_a [Mus musculus]
          Length = 332

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 3/179 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ + + M   +  LK +       R +   LD + V      V L+Q+  +++  P
Sbjct: 82  IISLEEVDEDMKSVMEALKDNFNRTLNIRTASGSLDHITVVTADGKVALSQIGQISMKSP 141

Query: 64  RMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I  S + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QVILVNMAIFPECTAAAIKAIRGSRMNLNPEVEGTLIRVPIPKLTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            K+K ++R +  + M+ LKKS+   K SED +  +E  I +I D T+  +D     + K
Sbjct: 202 NKAKENLRKVCTNAMNKLKKSK--DKTSEDTIRLMEKQISQIADDTVAELDQHLAARPK 258


>gi|289811668|ref|ZP_06542297.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 96

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/92 (44%), Positives = 60/92 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D
Sbjct: 4   RMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFD 63

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVP 104
           + M  +VE+ I  S+LGLNP   G  +R+P+P
Sbjct: 64  RSMGPAVEKAIMASDLGLNPSSAGTDIRVPLP 95


>gi|148670216|gb|EDL02163.1| mCG10533, isoform CRA_c [Mus musculus]
          Length = 345

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 3/179 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ + + M   +  LK +       R +   LD + V      V L+Q+  +++  P
Sbjct: 82  IISLEEVDEDMKSVMEALKDNFNRTLNIRTASGSLDHITVVTADGKVALSQIGQISMKSP 141

Query: 64  RMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++++V++    E  A+  + I  S + LNP VEG ++R+P+P+ T E R  LVK+A    
Sbjct: 142 QVILVNMAIFPECTAAAIKAIRGSRMNLNPEVEGTLIRVPIPKLTREHREMLVKLAKQNT 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            K+K ++R +  + M+ LKKS+   K SED +  +E  I +I D T+  +D     + K
Sbjct: 202 NKAKENLRKVCTNAMNKLKKSK--DKTSEDTIRLMEKQISQIADDTVAELDQHLAARPK 258


>gi|66350822|emb|CAI95712.1| novel protein similar to mitochondrial ribosome recycling factor
           isoform 1 (LOC286423) [Homo sapiens]
          Length = 262

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 5/183 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDM-MTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           +I+L+ + + M   I   K +   TL  G  SP  LD + V      + LNQ+  ++V  
Sbjct: 82  IINLEEVNEEMKSVIEARKDNFNKTLNIG-TSPGSLDKIAVVTADGKLALNQIRQISVKL 140

Query: 63  PRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           P++++V++    E   +  + I ES + LNP VEG ++R+P+P+   E R  LVK+A   
Sbjct: 141 PQLILVNMASFPEFTVAAIKAIRESGMNLNPEVEGTLIRVPIPQVIREHREMLVKLAKQN 200

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
             K+  S+R +  + M+ LKKS+ +   SE  +   E  I ++ D T+  +      K K
Sbjct: 201 TNKATYSLRKVCTNAMNKLKKSKDT--VSEGTIRLTEKQISQMADDTVAELYRHLAVKTK 258

Query: 182 EIM 184
           E++
Sbjct: 259 ELL 261


>gi|297832754|ref|XP_002884259.1| hypothetical protein ARALYDRAFT_317013 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330099|gb|EFH60518.1| hypothetical protein ARALYDRAFT_317013 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 238

 Score = 83.2 bits (204), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 85/149 (57%), Gaps = 4/149 (2%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   I  L +D+  LRTGR +P MLD + VE  G  +PLN +A V+VL+P+ L V+ +D
Sbjct: 91  QMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYD 150

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            + V  +E+ I  S LGLNP ++GQ L   +P      + AL  +  A +   K  V+ +
Sbjct: 151 PDTVKELEKAIVASPLGLNPKLDGQRLVASIPADIFFGQ-ALDTIKKAGSSLPKDEVKRL 209

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDI 161
            ++ +D L K  K  K++EDM  S E +I
Sbjct: 210 EKE-VDELTK--KFVKSAEDMCKSKEKEI 235


>gi|219129866|ref|XP_002185100.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403595|gb|EEC43547.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 314

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 95/183 (51%), Gaps = 6/183 (3%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D   +K RM   +      + T+R    +  + D ++V+AYGSH PLN VA V +    +
Sbjct: 132 DPAQVKIRMTKVVDSFVTKLKTIRGSEPTADIFDDIQVDAYGSHAPLNSVAQVVISSSTL 191

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIV-EGQVLRIPVPETTEERRLALVKVAHAYAEK 124
              + +D E+  +V   I +  L LNP V EG V+RIP+P  + E R    K    + EK
Sbjct: 192 AQATCYDPELAKNVGVAIRD-KLELNPSVEEGGVVRIPLPRVSLEVRQQTAKALTKHTEK 250

Query: 125 SKISVRNIRRDGMDHLKKSRKSGK---ASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            +  VR IRR+ +  +K+  ++GK    S+D    ++ +++ +T+  I  ++   ++K K
Sbjct: 251 YRQRVRTIRRNVLKVVKQG-EAGKLEGISKDDAFRVQKEVEDVTEKIIVKLNEAADQKHK 309

Query: 182 EIM 184
            IM
Sbjct: 310 AIM 312


>gi|119632274|gb|EAX11869.1| hCG1980694, isoform CRA_b [Homo sapiens]
          Length = 245

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 5/167 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDM-MTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           +I+L+ + + M   I   K +   TL  G  SP  LD + V      + LNQ+  ++V  
Sbjct: 82  IINLEEVNEEMKSVIEARKDNFNKTLNIG-TSPGSLDKIAVVTADGKLALNQIRQISVKL 140

Query: 63  PRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           P++++V++    E   +  + I ES + LNP VEG ++R+P+P+   E R  LVK+A   
Sbjct: 141 PQLILVNMASFPEFTVAAIKAIRESGMNLNPEVEGTLIRVPIPQVIREHREMLVKLAKQN 200

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST 168
             K+K S+R +  + M+ LKKS+ +   SE  +   E  I ++ D T
Sbjct: 201 TNKAKYSLRKVCTNAMNKLKKSKDT--VSEGTIRLTEKQISQMADDT 245


>gi|219125246|ref|XP_002182896.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405690|gb|EEC45632.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 314

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 6/183 (3%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D   +K RM   +      + T+R    +  + D ++V+AYGSH PLN VA V +    +
Sbjct: 132 DPAQVKIRMTKVVDSFVTKLKTIRGSEPTADIFDDIQVDAYGSHAPLNSVAQVVISSSTL 191

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIV-EGQVLRIPVPETTEERRLALVKVAHAYAEK 124
              + +D E+  +V   I +  L LNP V EG V+RIP+P  + E R    K    + EK
Sbjct: 192 AQATCYDPELAKNVGVAIRD-KLELNPSVEEGGVVRIPLPRVSLEVRQQTAKALTKHTEK 250

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKA---SEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            +  VR IRR+ +  +K+  ++GK    S+D     + +I+ +T+  +  ++   E+K K
Sbjct: 251 YRQRVRTIRRNVLKVVKQG-EAGKLEGISKDDAFRAQKEIEDVTEKIMVKLNEAAEQKHK 309

Query: 182 EIM 184
            IM
Sbjct: 310 AIM 312


>gi|299783102|gb|ADJ41100.1| Ribosome recycling factor [Lactobacillus fermentum CECT 5716]
          Length = 97

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 63/96 (65%)

Query: 90  LNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKA 149
           + P  +G+ +R+ VP+ TE+RR  LVK   A  EK+K++VRN+RR+ MD LKK  K G  
Sbjct: 1   MTPQNDGETIRLVVPQLTEDRRKELVKDVKAEMEKAKVAVRNVRREAMDDLKKGNKDGDF 60

Query: 150 SEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++D    LE  +Q+ TD+ IKN++    +K+KE++ 
Sbjct: 61  NDDEFHDLEKQVQEETDAGIKNLEQIAADKEKELLE 96


>gi|304373376|ref|YP_003856585.1| Ribosome recycling factor [Mycoplasma hyorhinis HUB-1]
 gi|304309567|gb|ADM22047.1| Ribosome recycling factor [Mycoplasma hyorhinis HUB-1]
          Length = 186

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 4/166 (2%)

Query: 21  LKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE 80
           L++++  +  GR +P ++  +KVE Y S  P+ ++A ++V  P+ L++  +D+ +   + 
Sbjct: 25  LERNLSKINIGRANPQLVSFLKVEYYDSLTPIGEIAAISVPSPQQLLIKPYDQNVTKKIA 84

Query: 81  RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
             I    L +    EG  +R+ +PE T ++R  LVK    + E++K+ +R +R++    +
Sbjct: 85  STIVAHKLDVQIQNEGHQVRLILPELTTQKRQELVKSIKKFDEEAKVEIRQVRQE----V 140

Query: 141 KKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            K  K  + SED    +  ++QK  D  I+ +D    EK   +M F
Sbjct: 141 NKLVKKEEYSEDEERRILTELQKQIDKKIQEVDKVLSEKSANLMSF 186


>gi|293363510|ref|ZP_06610266.1| ribosome recycling factor [Mycoplasma alligatoris A21JP2]
 gi|292552859|gb|EFF41613.1| ribosome recycling factor [Mycoplasma alligatoris A21JP2]
          Length = 183

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 90/167 (53%), Gaps = 3/167 (1%)

Query: 18  ISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVA 77
           I+  K ++  + TGR +P ++  V+V  Y +  PL +++ ++V EP+ L++  +D     
Sbjct: 18  INHYKFELSKMSTGRANPQVIKGVRVNYYETLTPLEELSTISVPEPQQLLIKPYDSSSTK 77

Query: 78  SVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGM 137
            + + +  +NLG+ P+ EG  +R+  P  T +RR  LVK      E +KI +RN R++  
Sbjct: 78  EIVKALTAANLGILPVDEGHQVRMTFPTLTTDRRKELVKSLSKLTEGAKIGIRNARQEVN 137

Query: 138 DHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
             +K      + SED+     + IQK  D  ++ ++   +EK+ ++M
Sbjct: 138 KAIKADE---ELSEDIEKRYLDAIQKEVDKYMELVNEITKEKESDLM 181


>gi|256370721|ref|YP_003108546.1| putative ribosome recycling factor [Candidatus Sulcia muelleri
           SMDSEM]
 gi|256009513|gb|ACU52873.1| putative ribosome recycling factor [Candidatus Sulcia muelleri
           SMDSEM]
          Length = 182

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 98/175 (56%), Gaps = 3/175 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +K  + + I   K+ +  +R G+++ S+LD V ++ YG  V +  ++N+++L+ R L+++
Sbjct: 9   LKSEIKNKILGFKQKLFKIRIGKINESILDDVTIDLYGKKVQIKTISNISILDARTLLIT 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            W+++ +  + + + ++++   P   G+VL++ + + TEE R  L+K  +   E  KI++
Sbjct: 69  PWEEKNINIIYKALLKNSILYTPYKTGKVLKLKMAQLTEETRKELIKKINFILEIFKINL 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R +R+     +KK  K     +D +   + +IQ + +  I ++      KKKEI+
Sbjct: 129 RKLRKKT---IKKLNKINSLEKDCLKKNKIEIQNLINDCINSMKIISNRKKKEIL 180


>gi|321309651|ref|YP_004191980.1| ribosome recycling factor [Mycoplasma haemofelis str. Langford 1]
 gi|319801495|emb|CBY92141.1| ribosome recycling factor [Mycoplasma haemofelis str. Langford 1]
          Length = 177

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 12/175 (6%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
             D +  L +++  L T R+ P ++  + V AY + + LN++AN+ V   R L +  +D 
Sbjct: 9   FKDILDRLNQNLKKLYTSRIHPDLVSGIPVSAYDTEMKLNELANINVPSARTLEIKPYDI 68

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++A +E+ I ++    +PIV+   +RI +   TEE R   VK A    EK+K+S+R  R
Sbjct: 69  SLLAEIEKAIKKNKPEFSPIVQSDHIRISLLPPTEETRKRSVKEAKELLEKAKVSLRVAR 128

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN----IDSFFEEKKKEIM 184
           +D    +KK        ED+     N++    DS +K+    +D+ F  K+KE+M
Sbjct: 129 KDFQTKIKK----DGHPEDLEKKYMNEL----DSKVKDMNAQLDNLFALKEKELM 175


>gi|193216475|ref|YP_001999717.1| ribosome recycling factor [Mycoplasma arthritidis 158L3-1]
 gi|193001798|gb|ACF07013.1| ribosome recycling factor [Mycoplasma arthritidis 158L3-1]
          Length = 183

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 90/154 (58%), Gaps = 3/154 (1%)

Query: 31  GRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGL 90
           GR +P++++ +K+  Y S + L+++A+++V  P  L+V  +D  +  ++E+ I +  L +
Sbjct: 31  GRANPNLINKIKINYYDSILSLDEIASISVASPLQLLVKPYDMSVTKTIEKAIMDYKLNV 90

Query: 91  NPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKAS 150
               EG  +RI  P+ T E+R  +VK  +   E+++++VR  R++     KK + + + S
Sbjct: 91  TIANEGHQIRITYPQMTTEKRGEMVKQLNLITEQARVTVRQARQEIN---KKIKANKELS 147

Query: 151 EDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ED+     + IQ+  D +IK I    +EK+K+++
Sbjct: 148 EDLQKHYLDAIQEEIDKSIKKIQEIADEKEKDLL 181


>gi|16265934|gb|AAL16673.1|AF358685_1 ribosome releasing factor [Helicobacter hepaticus]
          Length = 96

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 63/95 (66%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +I  L++D  TLR+G+VS ++LD V+V+ YG+  PLNQV +V   +   ++++ W+K
Sbjct: 2   MDKSIESLRRDFSTLRSGKVSVNILDNVRVDYYGTPTPLNQVGSVIAQDATTIIITPWEK 61

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTE 108
            ++  +E+ I E+N+G+NP  + + +++  P  T+
Sbjct: 62  PLIKDIEKSIQEANIGVNPNSDSECVKLFFPPMTQ 96


>gi|330723724|gb|AEC46094.1| Ribosome recycling factor [Mycoplasma hyorhinis MCLD]
          Length = 186

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 4/166 (2%)

Query: 21  LKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE 80
           L++++  +  GR +P ++  +KVE Y S  P+ ++A ++V  P+ L++  +D+ +   + 
Sbjct: 25  LERNLSKINIGRANPQLVSYLKVEYYDSLTPIGEIAAISVPSPQQLLIKPYDQNVTKKIA 84

Query: 81  RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
             I    L +    EG  +R+ +PE T ++R  LVK    + E++K+ +R +R++    +
Sbjct: 85  STIVAHKLDVQIQNEGHQVRLILPELTTQKRQELVKSIKKFDEEAKVEIRQVRQE----V 140

Query: 141 KKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            K  K  + SED    +  ++QK  D  I+ +D    EK   +M F
Sbjct: 141 NKLVKKEEYSEDEERRILIELQKQIDKKIQEVDKVLSEKSANLMSF 186


>gi|91077948|ref|XP_966879.1| PREDICTED: similar to mitochondrial ribosome recycling factor
           [Tribolium castaneum]
 gi|270002287|gb|EEZ98734.1| hypothetical protein TcasGA2_TC001287 [Tribolium castaneum]
          Length = 262

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 99/186 (53%), Gaps = 6/186 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           ++++++++++K +M   +  LK+D +   + R +   ++ + VE  G    L ++A +  
Sbjct: 78  LSEIVNVESLKTQMQKAVDLLKEDYVKHLSVRTTTGSVESIPVELDGKTHSLQELAQIIR 137

Query: 61  LEPRMLVV--SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
             P+ LV+  SV+ + + A++ + I +S + LNP  +G  L IP+P+ T E R  L K A
Sbjct: 138 KNPKTLVINMSVFPQAIPAAL-KAIEKSGMNLNPQQDGTTLFIPIPKVTTEHRENLAKSA 196

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
                K +  +R+++   +  LK   K  K SEDM  + E  I  I D+ I   +   E 
Sbjct: 197 KTMFIKCRDGIRDVQNKQVKSLK---KKDKVSEDMARNSEQQIVAIADAYIAEAEKILES 253

Query: 179 KKKEIM 184
           K+KE++
Sbjct: 254 KQKELV 259


>gi|145510568|ref|XP_001441217.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408456|emb|CAK73820.1| unnamed protein product [Paramecium tetraurelia]
          Length = 233

 Score = 77.8 bits (190), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 99/186 (53%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +++ ID  + + +        ++ +  L+ G+++P MLD V ++AYG  +PL+ +A  + 
Sbjct: 49  LSKTIDFTSYQSKFDQYAQKFQEALKKLQVGKLTPEMLDRVSIQAYGEKLPLSSLAQASQ 108

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLN-PIVEGQVLRIPVPETTEERRLALVKVAH 119
               +L+++V+D+  +  V + +  S+L L     + Q++       T+E R+  V    
Sbjct: 109 KSQGVLILNVFDESTLMDVMKALENSDLNLQVKKQDKQIVCQLAQGNTKESRIMAVNNLK 168

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E +K ++R IR + +D LK  +K    SED +   E  IQ + +   +++DS ++ K
Sbjct: 169 KLMEDAKQNLRQIRHECIDDLKPYKKV--TSEDTMRQAEKQIQDLFEKQTQSLDSLYKSK 226

Query: 180 KKEIMH 185
           +KE+++
Sbjct: 227 EKELLN 232


>gi|167520356|ref|XP_001744517.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776848|gb|EDQ90466.1| predicted protein [Monosiga brevicollis MX1]
          Length = 253

 Score = 77.4 bits (189), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 92/179 (51%), Gaps = 3/179 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           + L  ++D+    +  L  +  T+RTG V+P++LD VKV+   +   L+Q   V+V    
Sbjct: 74  VPLDALQDKYHGQLQHLLNEYATIRTGEVTPNLLDGVKVKMGDATFALSQAGMVSVKNTD 133

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L+V+ +D +   +    + ++N+  NP+ +  V+RI +P+ T+E R  +VK A    E+
Sbjct: 134 TLIVTTFDSDTAKAAYEAVVDANIAPNPVRDDLVIRIQMPKLTKEYREQVVKRAKEMLEQ 193

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +K  +R++R   +  LK +      SED   +++  +  I    +   D  +E+K   I
Sbjct: 194 TKNKMRHLRSHAVSQLKGTE---GLSEDDTHAMQEYLDAINTHFVAQADEMYEKKADHI 249


>gi|307069549|ref|YP_003878026.1| putative ribosome recycling factor [Candidatus Zinderia insecticola
           CARI]
 gi|306482809|gb|ADM89680.1| putative ribosome recycling factor [Candidatus Zinderia insecticola
           CARI]
          Length = 180

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 93/165 (56%), Gaps = 4/165 (2%)

Query: 21  LKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE 80
            K +++ ++  +++ ++L  +K++     + LN+++N+ V++ + L +  ++K ++ +++
Sbjct: 19  FKNNLIKIQGNKLNSNILYNIKIKYNNKKIYLNKISNIFVIDEKTLSIIPYEKNIINNIK 78

Query: 81  RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           + ++ +    N I +     I +P+   E +  ++     Y E+ KI++RN RR   + +
Sbjct: 79  KTLNYNKFNFNYIKKKNTFYIKIPKLNNEFKNIIINNLKKYTEEKKINIRNERRIFKNKI 138

Query: 141 KKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            K     K S + + +++N + K+T   I+ ID FF+ KKKEI++
Sbjct: 139 NKE----KYSLNEINNIKNKLDKLTKKYIEKIDFFFKIKKKEILN 179


>gi|198467224|ref|XP_001354314.2| GA18189 [Drosophila pseudoobscura pseudoobscura]
 gi|198149556|gb|EAL31367.2| GA18189 [Drosophila pseudoobscura pseudoobscura]
          Length = 261

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 97/185 (52%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++I+L ++  +M  ++  +K+D +   + R +   +D ++++  G    L ++A ++ 
Sbjct: 77  LREIINLDSLNTQMERSVQQMKEDFIKHLSLRSTSGAIDTLRIKVDGDEHELQELAQISR 136

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V+ +   + +  V R I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 137 KNPKTIIVNMIAFPQTIPDVLRAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 196

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++RN++    DH++K +K     +D   + +  +  I D  I   D     K
Sbjct: 197 ALFVKYRDAIRNVQN---DHIRKLKKQPDVGKDDAFAAQTQVTAIGDKFIAEADKLLASK 253

Query: 180 KKEIM 184
           +KE++
Sbjct: 254 QKELL 258


>gi|71894688|ref|YP_278796.1| ribosome releasing factor [Mycoplasma synoviae 53]
 gi|71851476|gb|AAZ44085.1| ribosome releasing factor [Mycoplasma synoviae 53]
          Length = 184

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 86/164 (52%), Gaps = 4/164 (2%)

Query: 24  DMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGI 83
           +M  + TG+ +P ++  +KV  Y +   L+++A + V EP+ L++  +D      + + I
Sbjct: 24  EMSKISTGKANPQIVKKIKVMYYDNPTELDEIATIMVPEPQQLLIKPFDATSTKDIVKAI 83

Query: 84  HESNLGLNPIV-EGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKK 142
             +NLG  P+  EG  +RI  P  T +RR  LVK    + E++K+ VRN R++ +  +K 
Sbjct: 84  LSANLGNFPMTDEGNQIRITFPPMTSDRRKELVKSLSKFIEQAKVGVRNARQEIIKAIK- 142

Query: 143 SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
                + SEDM  +    I+      I+ I +  +EK+ ++  F
Sbjct: 143 --SDAELSEDMQKNYVEKIELEVKKKIERISTLAKEKENDLNAF 184


>gi|289809014|ref|ZP_06539643.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 91

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 57/91 (62%)

Query: 96  GQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
           G  +R+P+P  TEERR  L K+    AE+++++VRN+RRD  D +K   K    SED   
Sbjct: 1   GTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDR 60

Query: 156 SLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
             + ++QK+TD+ IK +D+   +K+ E+M F
Sbjct: 61  RSQEEVQKMTDAAIKKVDAALADKEAELMQF 91


>gi|157121137|ref|XP_001659843.1| mitochondrial ribosome recycling factor [Aedes aegypti]
 gi|108874707|gb|EAT38932.1| mitochondrial ribosome recycling factor [Aedes aegypti]
          Length = 258

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 96/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + +VID+++++  M  T+  +K+D +   + R +   ++ +KV   G    L ++A V  
Sbjct: 74  LAEVIDIESLRTHMEKTLETMKEDYIKNLSLRSATGAIETLKVSYEGKDYQLQELAQVVR 133

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +VV+ V   + + +V + I +S + LNP  +G  L IPVP+ T E R  L K A 
Sbjct: 134 KNPKTVVVNLVSFPQTIPAVLQAIQKSGMNLNPQQDGTTLFIPVPKVTREHREGLAKNAK 193

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
               K + ++++I+      +K+ +K    SED+   ++  +  I +  IK  +   E K
Sbjct: 194 TLFVKCRDAIKDIQNKT---IKQVKKQANISEDLSFQVQTQVTAIANGYIKEAEKMLETK 250

Query: 180 KKEIM 184
           + E++
Sbjct: 251 QAELL 255


>gi|118384524|ref|XP_001025410.1| ribosome recycling factor family protein [Tetrahymena thermophila]
 gi|89307177|gb|EAS05165.1| ribosome recycling factor family protein [Tetrahymena thermophila
           SB210]
          Length = 268

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 88/164 (53%), Gaps = 3/164 (1%)

Query: 22  KKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVER 81
           K ++  L+TGR++P M + + V AYG   PL ++  +       + ++++D  +V ++ +
Sbjct: 105 KAELAKLKTGRLTPDMFEKLSVVAYGEKTPLTELCQIVSKAVTTVQLNIYDDALVGAIHK 164

Query: 82  GIHESNLGLNPIVEGQVLRIP-VPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
            +  S+L L    EG+++    V   T+E + A +K A +  +K+K  +R  R+ G D +
Sbjct: 165 ILENSDLNLQLKREGKIITCTMVGGNTKEIKDATIKAAKSVVDKAKNLLRKHRQTGQDMI 224

Query: 141 KKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           K  +K    SED +   E ++  I +  +  +D+  + K+KEI+
Sbjct: 225 KGYKKF--ESEDFIKEAEKEVDNIHNKFVAELDNLLKIKEKEII 266


>gi|312978248|ref|ZP_07789992.1| ribosome recycling factor [Lactobacillus crispatus CTV-05]
 gi|310894966|gb|EFQ44036.1| ribosome recycling factor [Lactobacillus crispatus CTV-05]
          Length = 82

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 51/79 (64%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           T ERR  + K    +AE++KI+VRN+RRD M+ LKK  K+G  +ED   +LE  +QK+TD
Sbjct: 3   TGERREEIAKEVGKFAEEAKIAVRNVRRDAMNTLKKDEKNGDITEDEQRNLEKQVQKVTD 62

Query: 167 STIKNIDSFFEEKKKEIMH 185
              K ID   +EK+KEI  
Sbjct: 63  DAAKQIDQLADEKRKEITQ 81


>gi|194751343|ref|XP_001957986.1| GF10686 [Drosophila ananassae]
 gi|190625268|gb|EDV40792.1| GF10686 [Drosophila ananassae]
          Length = 255

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 96/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++++   +  +M  ++S +K D +   + R +   +D ++V+  G    L ++A ++ 
Sbjct: 72  LREILNFDGLNSQMQKSVSQMKDDFVKHLSLRSTSGAIDTLRVKVDGQEHELQELAQISR 131

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V+ +   + +  V + I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 132 KNPKTIIVNMIAFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 191

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++   M+H++K +K  +  +D   + +  +  I D  I   D     K
Sbjct: 192 ALFVKYRDAIRGVQ---MEHIRKLKKQPELGKDDAFAAQAQVTAIADRYIGEADKLLATK 248

Query: 180 KKEIM 184
           +KE++
Sbjct: 249 QKELL 253


>gi|209736400|gb|ACI69069.1| Ribosome recycling factor, mitochondrial precursor [Salmo salar]
          Length = 231

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 35/181 (19%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L+ +K+ M   ++ LK D     + R SP  LD         H+             
Sbjct: 85  IISLEEVKEDMAAVLTTLKDDFSRNLSIRTSPGALD---------HI------------- 122

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
                      +V +  R + ES++ LNP V+G ++R+ +P+ T E R  L K+A  ++ 
Sbjct: 123 -----------VVGAATRSLRESSMKLNPEVDGTIIRVAIPKVTREHRENLAKLAKQFSN 171

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K+K S+R +R + +  +KK++ +   SED +  +E  I ++ DS   ++D     K KE+
Sbjct: 172 KAKESLRKVRSNAITQVKKAKDT--VSEDTIRLVEKQIGQMADSFAADVDKQLTTKTKEL 229

Query: 184 M 184
           +
Sbjct: 230 L 230


>gi|307128651|ref|YP_003880681.1| ribosome recycling factor [Candidatus Sulcia muelleri CARI]
 gi|306483113|gb|ADM89983.1| ribosome recycling factor [Candidatus Sulcia muelleri CARI]
          Length = 157

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 68/111 (61%)

Query: 25  MMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIH 84
           ++ +R  R++ + LD + +E YG+ VP+N+++ +  +    +++  W+K+ +  + + + 
Sbjct: 26  ILKIRIDRINENFLDSINIEYYGNKVPINKISTILKVNSITVLIKPWEKKYLNIIYKTLL 85

Query: 85  ESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRD 135
           + + GL  I +G+++++ + + TEE R  L+K    + EK KI +RNIR +
Sbjct: 86  KEDRGLIIINDGKMIKLKISKLTEETRKKLIKKVKFFLEKKKIEIRNIRNE 136


>gi|323507599|emb|CBQ67470.1| conserved hypothetical protein [Sporisorium reilianum]
          Length = 331

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 18/196 (9%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTL--RTGRVSPSMLDLVKVE-AYGSHV---PLNQV 55
           ++  DL  I   M   +   +     L    GR  PS+LD +KVE A G+     PL + 
Sbjct: 139 DEAFDLDAIASHMSRAVERCRSTTSALVGSFGRADPSLLDNIKVEFASGTSKTLHPLREF 198

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVE---GQVLRIPVPETTEERRL 112
           A V V +   L+V+ +D +M+  +ER I+ S L L P  +     VLR+ VP+ T E R 
Sbjct: 199 ATVGVRD-SALIVTAFDADMLKHIERAIYTSQLNLTPQAQPGDDSVLRVAVPQPTTESRQ 257

Query: 113 ALVKVAHAYAEKSKISVRNIRRDGMDHLKK--SRK-SGKASEDMVA-SLENDIQKITDST 168
           A+VK      E +++S+R+ R      +K    RK  GK+  D  +  +E + +K T   
Sbjct: 258 AMVKDLTRICENARVSIRDARHKAQKQIKSDVDRKVVGKSEGDKESKKVEAETKKWT--- 314

Query: 169 IKNIDSFFEEKKKEIM 184
              +D  FE+ K+ ++
Sbjct: 315 -AQVDQLFEKMKQSLL 329


>gi|71003105|ref|XP_756233.1| hypothetical protein UM00086.1 [Ustilago maydis 521]
 gi|46096238|gb|EAK81471.1| hypothetical protein UM00086.1 [Ustilago maydis 521]
          Length = 183

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/120 (38%), Positives = 64/120 (53%), Gaps = 10/120 (8%)

Query: 31  GRVSPSMLDLVKVE-AYGSHV----PLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHE 85
           GR  PS+LD +KVE   GS      PL   A V V +   L+V+ +D +MV  +ER I+ 
Sbjct: 20  GRADPSLLDSIKVEYPAGSSSKALHPLRDFATVGVRDG-ALIVTAFDADMVKHIERAIYA 78

Query: 86  SNLGLNPIVEG----QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLK 141
           SNL L P  +      VLR+ VP+ T E R ALVK      E +++S+R+ R      +K
Sbjct: 79  SNLNLTPQTQAGGEENVLRVAVPQPTTESRQALVKDLTKICENARVSIRDARHKAQKQIK 138


>gi|217072808|gb|ACJ84764.1| unknown [Medicago truncatula]
          Length = 206

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 4/122 (3%)

Query: 9   NIK----DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           NIK     +M   ++ L  ++  LRTGR S  MLD + VE  G  +PL+++A V+VL+P+
Sbjct: 84  NIKASASSQMEAAMTALSVELSKLRTGRASAGMLDHIIVETGGVKMPLSRIALVSVLDPK 143

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L V+ +D E +  +E  I  S LGLNP  +G+ L   +P  T+E   A+ K+     E 
Sbjct: 144 TLSVNPYDPETLKQLENAIVSSPLGLNPRTDGERLIAVIPPLTKEHMQAMNKLVTKSCED 203

Query: 125 SK 126
           ++
Sbjct: 204 TR 205


>gi|195429112|ref|XP_002062608.1| GK17631 [Drosophila willistoni]
 gi|194158693|gb|EDW73594.1| GK17631 [Drosophila willistoni]
          Length = 257

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 95/185 (51%), Gaps = 3/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++I+L  +  +M  ++  +K D +   + R +   +D ++++  G+   L ++A ++ 
Sbjct: 72  LREIINLDQLNTQMEKSVQQMKDDFIKHLSLRSTSGAIDSLRIKVDGNVHELQELAQISR 131

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++++ +   + +  V R I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 132 KNPKTIIINMIAFPQTIPDVLRAIEKSGMNLNPQQDGTTLFIPIPKVTKEHREHLSKNAK 191

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++ D +  LKK  ++    +D     +N +  I D  I   D     K
Sbjct: 192 ALYIKYRDAIRQVQNDHIRKLKK--QADDIGKDDAFKAQNQVTAIADKYIAEADKLLATK 249

Query: 180 KKEIM 184
           +KE++
Sbjct: 250 QKELL 254


>gi|195377904|ref|XP_002047727.1| GJ11766 [Drosophila virilis]
 gi|194154885|gb|EDW70069.1| GJ11766 [Drosophila virilis]
          Length = 260

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 97/185 (52%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++I+L ++  +M  ++  +K D +   + R +   +D ++++  G+   L ++A ++ 
Sbjct: 76  LRELINLDSLNAQMEKSVLQMKDDFIKNLSLRSTSGAIDSLRIKVDGAEHELQELAQISR 135

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +VV+ +   + +  V R I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 136 KNPKTIVVNMIAFPQTIPDVLRAIEKSGMNLNPQQDGTTLFIPIPKVTKEHREHLSKNAK 195

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R+I+   +  LKK    GK  +D  A+ +  +  I D  I   D     K
Sbjct: 196 AMFIKYRDAIRDIQNTQIRKLKKQTDIGK--DDAFAA-QTQVTAIADKYIAEADKLLASK 252

Query: 180 KKEIM 184
           +KE++
Sbjct: 253 QKELL 257


>gi|302848442|ref|XP_002955753.1| hypothetical protein VOLCADRAFT_106930 [Volvox carteri f.
           nagariensis]
 gi|300258946|gb|EFJ43178.1| hypothetical protein VOLCADRAFT_106930 [Volvox carteri f.
           nagariensis]
          Length = 266

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 2/181 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKV--EAYGSHVPLNQVANVTVLE 62
            DL     +M   +   +K++  +RTGR SP +L+ V V   ++G HVP+  +  V V  
Sbjct: 82  FDLAPFVSQMRSALEHYQKELAGIRTGRASPGLLEGVMVGESSHGKHVPVRALGTVVVRN 141

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           P +LVV V++ +    +   I  S L L   VEG  + + VP  T +    +V++A   A
Sbjct: 142 PHLLVVEVYNPQDAQPLAEAIQSSPLKLQARVEGLEVLVEVPRLTMDMVERMVRLAGQEA 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E ++  VR  R   +D  K+    G  S++     E  +Q  TD  I  +D+    K+ E
Sbjct: 202 EAARAEVRRARHKALDLAKRVAAGGGVSKEETKRREVQVQVATDKHIAEVDALLRAKETE 261

Query: 183 I 183
           +
Sbjct: 262 L 262


>gi|58263076|ref|XP_568948.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134107878|ref|XP_777321.1| hypothetical protein CNBB1230 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260011|gb|EAL22674.1| hypothetical protein CNBB1230 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223598|gb|AAW41641.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
          Length = 252

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 17/158 (10%)

Query: 31  GRVSPSMLDLVKV---EAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           GRVSP++LD V+V   +  G+ + LN +A+VT  +   L V VWD   +  VE  IH +N
Sbjct: 104 GRVSPALLDSVRVSLPDTPGT-LHLNALASVTT-KGNALFVEVWDTASLKQVESAIHAAN 161

Query: 88  L-GLNPI-VEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRK 145
           L G++P  + G  L+IP+   T E+R  +++      E +K  +R  R DG   L   + 
Sbjct: 162 LPGISPQRMAGTTLKIPIARPTVEQRAEILRQLAETVEAAKTQIRVARTDGFKALGGRKA 221

Query: 146 SGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +G           +++QK+ D   K++D      KKE 
Sbjct: 222 NG----------TDEVQKVVDEMCKDLDGQLALAKKEF 249


>gi|299143516|ref|ZP_07036596.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 386 str.
          F0131]
 gi|298518001|gb|EFI41740.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 386 str.
          F0131]
          Length = 78

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 3/78 (3%)

Query: 9  NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
          + K+R+  +I+   K   ++R GR +PS+LD + V+ YG   PLNQVA ++  EPR+L +
Sbjct: 4  DCKERICKSITDRSK---SIRAGRANPSLLDKITVDYYGQATPLNQVAGISAPEPRLLAI 60

Query: 69 SVWDKEMVASVERGIHES 86
          + WD  ++ ++E+ I +S
Sbjct: 61 TPWDASLIPAIEKAILKS 78


>gi|195020953|ref|XP_001985300.1| GH14583 [Drosophila grimshawi]
 gi|193898782|gb|EDV97648.1| GH14583 [Drosophila grimshawi]
          Length = 262

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 98/185 (52%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++I+L  +  +M  ++  ++ D +   + R +   +D ++++  G+   L Q+A ++ 
Sbjct: 78  LRELINLDGLNAQMEKSVLQMRDDFIKNLSLRSTSGAIDTLRIKVDGAEHELQQLAQISR 137

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +V++ +   + +  V R I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 138 KNPKTIVINMIAFPQTIPDVLRAIEKSGMNLNPQQDGTTLFIPIPKVTKEHREHLSKNAK 197

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R+I+   +  LKK  ++  A +D+ A+ +  +  I D  I   D     K
Sbjct: 198 ALFIKHRDAIRDIQNAEIRKLKK--QTDIAKDDVFAA-QTQLTAIADKYIGEADKLLASK 254

Query: 180 KKEIM 184
           +KE++
Sbjct: 255 QKELL 259


>gi|195129487|ref|XP_002009187.1| GI13908 [Drosophila mojavensis]
 gi|193920796|gb|EDW19663.1| GI13908 [Drosophila mojavensis]
          Length = 266

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 97/184 (52%), Gaps = 4/184 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++I+L ++  +M  ++  +K+D +   + R +   +D ++++  G+   L ++A ++ 
Sbjct: 82  LRELINLDSLNAQMEKSVLQMKEDFIKNLSLRSTSGAIDTLRIKVDGAEHELQELAQISR 141

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V+ +   + +  V R I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 142 KNPKTIIVNMIAFPQTIPDVLRAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRELLSKNAK 201

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R+I+      ++K +K    ++D V + +  +  I D  I   D     K
Sbjct: 202 ALFIKYRDAIRDIQN---AQIRKLKKQTDVAKDDVFAAQTQVTAIADKYIAEADKLLVSK 258

Query: 180 KKEI 183
           +KE+
Sbjct: 259 QKEL 262


>gi|24661488|ref|NP_648302.2| CG4447 [Drosophila melanogaster]
 gi|7294968|gb|AAF50297.1| CG4447 [Drosophila melanogaster]
 gi|201065901|gb|ACH92360.1| FI06490p [Drosophila melanogaster]
          Length = 254

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 95/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++++   +  +M  ++  +K+D +   + R +   +D ++++  G    L ++A ++ 
Sbjct: 71  LREILNFDGLNSQMQKSVMQMKEDFVKHLSLRSTSGAIDTLRIKVDGQEHELQELAQISR 130

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V+ +   + +  V + I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 131 KNPKTIIVNMIGFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 190

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++    +H++K +K  +  +D   + +  +  I D  I   D     K
Sbjct: 191 ALFVKYRDAIRGVQN---EHIRKLKKQPELGKDDAFAAQAQVTAIADRFISEADKLLASK 247

Query: 180 KKEIM 184
           +KE++
Sbjct: 248 QKELL 252


>gi|194867771|ref|XP_001972146.1| GG15364 [Drosophila erecta]
 gi|190653929|gb|EDV51172.1| GG15364 [Drosophila erecta]
          Length = 254

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 96/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++++   +  +M  ++  +K+D +   + R +   +D ++++  G    L ++A ++ 
Sbjct: 71  LREILNFDGLNSQMQKSVMQMKEDFVKHLSLRSTSGAIDTLRIKVDGQEHELQELAQISR 130

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V+ +   + +  V + I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 131 KNPKTIIVNMIGFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 190

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++ + +  LKK  + GK  +D  A+ +  +  I D  I   D     K
Sbjct: 191 ALFVKYRDAIRGVQNEQIRKLKKQPELGK--DDAFAA-QAQVTAIADRFISEADKLLASK 247

Query: 180 KKEIM 184
           +KE++
Sbjct: 248 QKELL 252


>gi|195490897|ref|XP_002093333.1| GE20827 [Drosophila yakuba]
 gi|194179434|gb|EDW93045.1| GE20827 [Drosophila yakuba]
          Length = 254

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 96/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++++   +  +M  ++  +K+D +   + R +   +D ++++  G    L ++A ++ 
Sbjct: 71  LREILNFDGLNSQMQKSVMQMKEDFVKHLSLRSTSGAIDTLRIKVDGQEHELQELAQISR 130

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V+ +   + +  V + I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 131 KNPKTIIVNMIGFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 190

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++ + +  LKK  + GK  +D  A+ +  +  I D  I   D     K
Sbjct: 191 ALFVKYRDAIRGVQNEQIRKLKKQPELGK--DDAFAA-QAQVTAIADRFISEADKLLASK 247

Query: 180 KKEIM 184
           +KE++
Sbjct: 248 QKELL 252


>gi|312876744|ref|ZP_07736723.1| ribosome recycling factor [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796475|gb|EFR12825.1| ribosome recycling factor [Caldicellulosiruptor lactoaceticus 6A]
          Length = 84

 Score = 67.8 bits (164), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 49/78 (62%)

Query: 7  LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
          +Q  +++M   I  LK++  T+R GR +P +LD V V+ YG   P+ QVA++TV E RM+
Sbjct: 5  IQVAEEKMKKAIETLKEEFATVRAGRANPHILDKVMVDYYGVPTPIPQVASITVPEARMI 64

Query: 67 VVSVWDKEMVASVERGIH 84
          V+  W+  M+  +E+ I 
Sbjct: 65 VIQPWEARMLKEIEKAIQ 82


>gi|54020577|ref|YP_116060.1| ribosome recycling factor [Mycoplasma hyopneumoniae 232]
 gi|53987750|gb|AAV27951.1| ribosome releasing factor [Mycoplasma hyopneumoniae 232]
 gi|144227682|gb|AAZ44621.2| ribosome recycling factor [Mycoplasma hyopneumoniae J]
 gi|144575504|gb|AAZ53900.2| ribosome recycling factor [Mycoplasma hyopneumoniae 7448]
 gi|312601486|gb|ADQ90741.1| Ribosome recycling factor [Mycoplasma hyopneumoniae 168]
          Length = 186

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 4/172 (2%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++  D  S+L+K    +  G  +P ++  +KV  Y    P+N++A+++   P  L+V  +
Sbjct: 16  EKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLVKPY 75

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           + + V  +   I  + +      E   +R+  PE T ++R   +       E+ K+ +R 
Sbjct: 76  ETKYVKEIASAIVAAKIDAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVRMRL 135

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           IR+D    + K  K  + SED+       +QK  +S I+ ID  F++K K I
Sbjct: 136 IRQD----INKLIKKEEFSEDLEKDYLGQVQKNINSEIEKIDQLFDKKVKAI 183


>gi|47458890|ref|YP_015752.1| ribosome recycling factor [Mycoplasma mobile 163K]
 gi|60390256|sp|Q6KIN5|RRF_MYCMO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|47458218|gb|AAT27541.1| ribosome recycling factor [Mycoplasma mobile 163K]
          Length = 183

 Score = 67.4 bits (163), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 89/175 (50%), Gaps = 3/175 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +K  M   +      +  +  G+ +P ++  +K   Y   + + ++A ++V E + +++ 
Sbjct: 10  VKLEMEKAVQTYSNQIAKISAGKANPKLISGIKFIYYDEPMSIEEMAAISVPEAQQILIK 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D +   ++   +++ N  +  + EG  +R+  P  T ERR  LVK      E +K+++
Sbjct: 70  PYDIKTTKNIIESLNKMNYDMQIVDEGAQVRLKFPALTTERRKELVKQLVKLNESAKVAI 129

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R +R+D    +KK     + SED      ++IQK+TD  I  I+   ++K+KE+M
Sbjct: 130 RQVRQDENKLIKKDE---ELSEDEQKKYLDEIQKLTDKYIFKIEELNKDKEKELM 181


>gi|71893886|ref|YP_279332.1| ribosome recycling factor [Mycoplasma hyopneumoniae J]
 gi|72080865|ref|YP_287923.1| ribosome recycling factor [Mycoplasma hyopneumoniae 7448]
          Length = 174

 Score = 67.4 bits (163), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 4/172 (2%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++  D  S+L+K    +  G  +P ++  +KV  Y    P+N++A+++   P  L+V  +
Sbjct: 4   EKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLVKPY 63

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           + + V  +   I  + +      E   +R+  PE T ++R   +       E+ K+ +R 
Sbjct: 64  ETKYVKEIASAIVAAKIDAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVRMRL 123

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           IR+D    + K  K  + SED+       +QK  +S I+ ID  F++K K I
Sbjct: 124 IRQD----INKLIKKEEFSEDLEKDYLGQVQKNINSEIEKIDQLFDKKVKAI 171


>gi|321248742|ref|XP_003191225.1| hypothetical protein CGB_A1450C [Cryptococcus gattii WM276]
 gi|317457692|gb|ADV19438.1| Hypothetical Protein CGB_A1450C [Cryptococcus gattii WM276]
          Length = 252

 Score = 67.4 bits (163), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 80/158 (50%), Gaps = 17/158 (10%)

Query: 31  GRVSPSMLDLVKV---EAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           GRVSP++LD V+V   +  G+ + LN +A+VT  +   L V VWD   +  VE  IH +N
Sbjct: 104 GRVSPALLDSVRVTLPDTPGT-LHLNALASVTT-KGNALFVEVWDTASLKQVESAIHSAN 161

Query: 88  L-GLNPI-VEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRK 145
           L G++P  +    L+IP+   T E+R  +++      E +K  +R  R DG   L   + 
Sbjct: 162 LPGISPQRMAATTLKIPIARPTVEQRTEILRQLAETVEAAKTQIRVARTDGFKALGGRKA 221

Query: 146 SGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +G           +++QK+ D   K++D      KKE 
Sbjct: 222 NGT----------DEVQKVVDEMCKDLDGQLALAKKEF 249


>gi|156542086|ref|XP_001602891.1| PREDICTED: similar to GA18189-PA [Nasonia vitripennis]
          Length = 240

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 97/185 (52%), Gaps = 5/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + +++D+ ++  +M   I  +K D +   T R +   L+ + V+       + ++A +  
Sbjct: 56  LGELLDVDDLTSQMSQAIENMKADFIKNLTLRSTTGSLEQIPVKVDDKEYQIQELAQI-A 114

Query: 61  LEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
            +P++++++V      +  + + I +S L +NP  EG  L +P+P+ T+E R  L K A 
Sbjct: 115 RKPKLIILNVSSFPTAIPHILKAIQKSGLNINPQQEGTTLYLPIPKVTKEHRENLSKNAK 174

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   + +  +++IR   + +LKK +     SED +  +++ ++ ++D  +K  +   E K
Sbjct: 175 AIYIRYRDEIKDIRSKAIKNLKKRK---DVSEDSIRRVQSQVEALSDKYVKEAEIVLETK 231

Query: 180 KKEIM 184
           + E++
Sbjct: 232 QNELL 236


>gi|61680523|pdb|1Y69|8 Chain 8, Rrf Domain I In Complex With The 50s Ribosomal Subunit
           From Deinococcus Radiodurans
          Length = 113

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 52/80 (65%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           TEERR  L K+    AE+++++VRN+RRD  D +K   K  + SED     ++D+QK+TD
Sbjct: 34  TEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTD 93

Query: 167 STIKNIDSFFEEKKKEIMHF 186
           + IK I++   +K+ E+M F
Sbjct: 94  AAIKKIEAALADKEAELMQF 113


>gi|332375891|gb|AEE63086.1| unknown [Dendroctonus ponderosae]
          Length = 268

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 96/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + +VI++ +++  M   +  ++ D +   + R +   ++ V V   G+   + ++A +  
Sbjct: 84  LAEVINVGSLRSLMEKALLQMEDDFVKHLSLRSTTGAIESVPVNLDGNEHTMQELAQIVR 143

Query: 61  LEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +V++     + + +  + + +S + LNP  +G  L IPVP+ T+E R  L K A 
Sbjct: 144 KNPKTIVMNFATFPQAIPAALKALSKSGMNLNPQQDGTTLFIPVPKVTKEHREQLAKNAK 203

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
               K K SVR+++   +  +K+ +K  + SED+  S+E  I  I D  I N ++   +K
Sbjct: 204 QLFVKCKDSVRDVQ---LKFIKQLKKQDRISEDLARSVEQQIIAIADQFIANAEATLNKK 260

Query: 180 KKEIM 184
           + E++
Sbjct: 261 QAELL 265


>gi|307167406|gb|EFN60991.1| Ribosome-recycling factor, mitochondrial [Camponotus floridanus]
          Length = 212

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 99/185 (53%), Gaps = 5/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +VID+  +  ++   I  +K D     + R +   ++ + V+  G    L ++A ++ 
Sbjct: 28  MEEVIDVNKLTSQLERAIEIMKDDFAKYLSIRSTVGAIEELSVKFEGKDYTLQELAQIS- 86

Query: 61  LEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
            +P+++V+++    + +  + + + ++ + LNP  +G  + +P+P+ T+E R +L K A 
Sbjct: 87  RKPKLIVLNISTFPQAIPDILKSLTKNQMNLNPQQDGTTVYVPIPKVTKEHRESLSKNAK 146

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           ++  K   ++R+IR   +  +K   K G A +D++  +EN I  +++  +   +   E K
Sbjct: 147 SFYTKCCSNIRDIRNKQIKTVK--NKEGLA-KDIIFRMENYIDILSNQYVSKAEQLLETK 203

Query: 180 KKEIM 184
           +KE++
Sbjct: 204 QKELL 208


>gi|17861680|gb|AAL39317.1| GH21184p [Drosophila melanogaster]
          Length = 254

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 94/185 (50%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++++   +  +M  ++  +K+D +   +   +   +D ++++  G    L ++A ++ 
Sbjct: 71  LREILNFDGLNSQMQKSVMQMKEDFVKHLSLPSTSGAIDTLRIKVDGQEHELQELAQISR 130

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V+ +   + +  V + I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 131 KNPKTIIVNMIGFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 190

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++    +H++K +K  +  +D   + +  +  I D  I   D     K
Sbjct: 191 ALFVKYRDAIRGVQN---EHIRKLKKQPELGKDDAFAAQAQVTAIADRFISEADKLLASK 247

Query: 180 KKEIM 184
           +KE++
Sbjct: 248 QKELL 252


>gi|322796292|gb|EFZ18864.1| hypothetical protein SINV_09513 [Solenopsis invicta]
          Length = 308

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 96/185 (51%), Gaps = 5/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + QVID+  +  ++   I  LK +     + R S   ++++ V+  G    L ++A ++ 
Sbjct: 124 LEQVIDVNKLTSQLDKAIEDLKNNFTQHLSIRSSMGAIEMLSVKFEGKDYTLQELAQIS- 182

Query: 61  LEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
            +P+++V++V    + +  + + + ++ + LNP  +G  + IPVP+ T+E R  L K A 
Sbjct: 183 RKPKLVVLNVSTFPQAIPDILKSLMKNQMKLNPQQDGTTIYIPVPKVTKEHRETLSKNAK 242

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           ++  K   +VR IR   +  +K+  K  K   D+V  +E+ I  ++   +   +   E K
Sbjct: 243 SFYVKCCDNVRQIRNKQIKAIKQKEKLAK---DLVFRIESYIDILSHQYVSKAEEILETK 299

Query: 180 KKEIM 184
           +KE++
Sbjct: 300 QKELL 304


>gi|58378683|ref|XP_308944.2| AGAP006804-PA [Anopheles gambiae str. PEST]
 gi|55246028|gb|EAA04181.2| AGAP006804-PA [Anopheles gambiae str. PEST]
          Length = 273

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 6/186 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +  +IDL  ++ +M  +++ +K D +   + R +   ++ +++   G    L ++  V  
Sbjct: 89  LGGLIDLDGLRTQMEKSLAAMKDDYVKNLSLRSTTGSIETLRITYEGKDYQLQELGQVVR 148

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ LVV+ V   + +  V + I  S + LNP  +G  L IPVP+ T E R  L K A 
Sbjct: 149 KNPKTLVVNLVAFPQTIPVVLQAIQRSGMNLNPQQDGTTLFIPVPKVTREHREGLAKNAK 208

Query: 120 AYAEKSKISVRNIRRDGMDH-LKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
                  I  R+  +D  +  +KK +K    SED     +  I  I D  +K  +   E 
Sbjct: 209 VLF----IKCRDRIKDAQNQSIKKLKKQSNVSEDEAFQAQAQITAIADGFVKEAEKLMEL 264

Query: 179 KKKEIM 184
           K+ E++
Sbjct: 265 KQAELL 270


>gi|312371081|gb|EFR19345.1| hypothetical protein AND_22651 [Anopheles darlingi]
          Length = 273

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 6/186 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +  +IDL  ++ +M  +++ +++D +   + R +   ++ +++   G    L ++A V  
Sbjct: 90  LGSLIDLPGLRTQMEKSLAAMREDYIKNLSLRSTTGSIETLRISFEGKDYQLQELAQVVR 149

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +VV+ V   + + +V + I  S + LNP  +G  L IPVP+ T E R  L K A 
Sbjct: 150 KNPKTIVVNLVSFPQTIPAVLQAIQRSGMNLNPQQDGTTLFIPVPKVTREHREGLAKNAK 209

Query: 120 AYAEKSKISVRNIRRDGMDH-LKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
                  I  R+  +D  +  +KK +K   ASED     +  I +I D  IK  +   E 
Sbjct: 210 VLF----IKCRDRIKDAQNQSIKKLKKQSNASEDEAYQAQQQITQIADGFIKEAEKIMES 265

Query: 179 KKKEIM 184
           K+ E++
Sbjct: 266 KQAELL 271


>gi|302678757|ref|XP_003029061.1| hypothetical protein SCHCODRAFT_59355 [Schizophyllum commune H4-8]
 gi|300102750|gb|EFI94158.1| hypothetical protein SCHCODRAFT_59355 [Schizophyllum commune H4-8]
          Length = 169

 Score = 64.3 bits (155), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 16/174 (9%)

Query: 14  MGDTISFLKKDMMTLR---TGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           M   + + +KD  +     +GRV+P +L  V+V+  G    L +VA V V E   L+V++
Sbjct: 1   MKAAVEWFRKDCASAEARASGRVTPQLLSPVRVKIEGGEYRLEEVATVGVREGSTLLVTL 60

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +D+  + +VE  ++ES L  N + + Q    ++IP+P+ T E R  L   A   AE +++
Sbjct: 61  FDESTMKAVESALYESKLP-NIVPQRQDVRTIKIPIPKPTVEARQRLHTEAQRKAEDTRV 119

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            +R         ++ S K GK  +  V  LE + QK+ D +I+ +D    + KK
Sbjct: 120 QLRK-------QMQTSVKKGKFEKHSV-ELE-EYQKLLDRSIEEVDKTLAQMKK 164


>gi|146331652|gb|ABQ22332.1| mitochondrial ribosome recycling factor precursor-like protein
           [Callithrix jacchus]
          Length = 90

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 94  VEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDM 153
           VEG ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+ +   SED 
Sbjct: 1   VEGTLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVRTNAMNKLKKSKDT--VSEDT 58

Query: 154 VASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +  +E  I ++ D T+  ++     K KE++
Sbjct: 59  IRLIEKQISQMADDTVAELERHLAVKTKELL 89


>gi|242798810|ref|XP_002483245.1| ribosome recycling factor, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218716590|gb|EED16011.1| ribosome recycling factor, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 289

 Score = 63.2 bits (152), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 7/184 (3%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE-AYGSH--VPLNQVANVTV 60
            +   ++  + D ++ LK+D+  LR+G R +P +++ ++V    GS+  V L++VA V  
Sbjct: 101 FNFSQLQTGISDALTRLKEDLQKLRSGGRFNPEVIEQLRVNLVKGSNETVRLSEVAQVVP 160

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKV 117
              R + + V ++++V  V   I  SNL L P  +      L +P+P  T+E R   +K 
Sbjct: 161 KGGRAVTIIVGEEDLVKPVNSAIISSNLSLTPQPDAHNPLQLNVPIPPPTKESRDQAIKA 220

Query: 118 AHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFE 177
           A    +K+  +VR+ R      L+  +K  +A  D +    + ++K+ +   K++   FE
Sbjct: 221 AKGAMDKAANAVRSARASVHKRLQDMQKKKEARPDDIRKAHDQMEKLVEKAQKDVKDTFE 280

Query: 178 EKKK 181
             +K
Sbjct: 281 SARK 284


>gi|291237422|ref|XP_002738637.1| PREDICTED: mitochondrial ribosome recycling factor-like
           [Saccoglossus kowalevskii]
          Length = 97

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 2/97 (2%)

Query: 88  LGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSG 147
           + LNP  EG ++++P+P+ T E R  L K A    +K+K++VRN+R   M+ +K+ +   
Sbjct: 1   MNLNPQSEGTMIQVPIPKVTREHREHLSKTAKTMCDKAKVNVRNVRSKVMNDIKQHK--D 58

Query: 148 KASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            AS+D++  LE  +Q++TD    + +     K KE++
Sbjct: 59  HASKDVLKMLEKQVQQLTDDFNASAEQLLVAKNKELL 95


>gi|307191744|gb|EFN75186.1| Ribosome-recycling factor, mitochondrial [Harpegnathos saltator]
          Length = 248

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 92/185 (49%), Gaps = 5/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +VID+  +  ++   I  LK + +   + R S   L+ + V        L ++A ++ 
Sbjct: 64  MEEVIDVNKLTSQLDKAIEGLKNNFVKYLSIRSSVGALEELVVRFEDKDYTLQELAQIS- 122

Query: 61  LEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
            +P+++V+++    + + ++   + ++ + LNP  +G  + +P+P+ T+E R  L K A 
Sbjct: 123 RKPKLIVLNISTFPQAIPNILNSLSKNQMNLNPQQDGTTVYVPIPKVTKEHRETLSKNAK 182

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
            +  K   +VR+IR   +  LK+     K   D+V  +E  I  ++   I   +   E K
Sbjct: 183 GFYVKCCDNVRDIRNKQIKSLKREESLAK---DLVFKIEGYIDALSQQYISKAEQLLETK 239

Query: 180 KKEIM 184
           +KE++
Sbjct: 240 QKELL 244


>gi|328850981|gb|EGG00140.1| hypothetical protein MELLADRAFT_39912 [Melampsora larici-populina
           98AG31]
          Length = 177

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 5/175 (2%)

Query: 14  MGDTISFLKKDMMTL--RTGRVSPSMLDLVKVEAYGS-HVPLNQVANVTVLEPRMLVVSV 70
           M   +S L+ ++ ++  R GR++P+ LD +KVE  G    P+  +A V VL+P  L V  
Sbjct: 1   MNSGVSKLRVEIKSIVNRVGRLTPAYLDGLKVEIEGGIRSPIEGLAQVIVLDPTKLSVVA 60

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQ-VLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           +D      +E+ +++S+L L P ++    + + +P+ T E R  L K A    E+++  +
Sbjct: 61  YDASHTKMIEQALYDSSLNLTPNLQPDGSIHLAIPKLTTESRQLLSKKAGQVCEQARSVI 120

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RN R+      +K       ++D   S    + +IT +  K +D   E K K ++
Sbjct: 121 RNSRQLAQKASRKDLDGNLITKDDFKSNNKVLDEITKAHTKLVDE-IENKSKRVL 174


>gi|170036921|ref|XP_001846309.1| ribosome recycling factor, mitochondrial [Culex quinquefasciatus]
 gi|167879937|gb|EDS43320.1| ribosome recycling factor, mitochondrial [Culex quinquefasciatus]
          Length = 259

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 90/185 (48%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + +V D+  ++  M   ++ +K D +   + R +   ++ +KV   G    L ++  +  
Sbjct: 74  LAEVFDVAALRTLMERNVATMKDDYIKNLSLRSATGAMETLKVTYEGKDYQLQELGQIVR 133

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +VV+ V   + + +V + I +S + LNP  +G  L +PVP+ T E R  L K A 
Sbjct: 134 KNPKTVVVNLVSFPQTIPAVLQAIQKSGMNLNPQQDGTTLFVPVPKVTREHREGLAKNAK 193

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
               K + ++++ +      +KK +K    SED+   ++  I  I +  IK  +   E K
Sbjct: 194 TLFIKCRDAIKDAQN---GQIKKLKKQTDISEDLNHQVQAQITAIANEYIKEAEKMMEIK 250

Query: 180 KKEIM 184
           + E++
Sbjct: 251 QAELL 255


>gi|207109446|ref|ZP_03243608.1| ribosome recycling factor [Helicobacter pylori HPKX_438_CA4C1]
          Length = 86

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 44/70 (62%)

Query: 46  YGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPE 105
           YG+   LNQV +V  L+   L +S W+K M+  +ER I E+N+G+NP  +G+ +++  P 
Sbjct: 1   YGTPTALNQVGSVMSLDATTLQISPWEKNMLKEIERSIQEANIGVNPNNDGETIKLFFPP 60

Query: 106 TTEERRLALV 115
            T E+RL  +
Sbjct: 61  MTTEQRLRFL 70


>gi|40317624|ref|NP_954646.1| ribosome-recycling factor, mitochondrial isoform 2 precursor [Homo
           sapiens]
 gi|56078380|gb|AAH53604.1| Mitochondrial ribosome recycling factor [Homo sapiens]
 gi|119607934|gb|EAW87528.1| mitochondrial ribosome recycling factor, isoform CRA_g [Homo
           sapiens]
          Length = 201

 Score = 60.5 bits (145), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 1/106 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 82  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTE 108
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P++ +
Sbjct: 142 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQSAK 187


>gi|332229923|ref|XP_003264136.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 2
           [Nomascus leucogenys]
          Length = 275

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 1/106 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 156 IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 215

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTE 108
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P++ +
Sbjct: 216 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQSAK 261


>gi|332832792|ref|XP_001135581.2| PREDICTED: ribosome-recycling factor, mitochondrial isoform 1 [Pan
           troglodytes]
          Length = 275

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 1/106 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 156 IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 215

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTE 108
           ++++V++    E  A+  + I ES + LNP VEG ++R+P+P++ +
Sbjct: 216 QLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQSAK 261


>gi|119195787|ref|XP_001248497.1| hypothetical protein CIMG_02268 [Coccidioides immitis RS]
          Length = 291

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 15/193 (7%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGSH--------VPLNQV 55
            D  ++ + + D +S LK+D+  LR G R++P +++ V+V    S         V L+++
Sbjct: 97  FDFSSLSNGIQDALSRLKEDVSKLRVGGRLNPELIENVRVTLKTSASSGKEKETVRLSEL 156

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHE-SNLGLNPIVEGQ---VLRIPVPETTEERR 111
           A V     RM+ + V ++E +  +   +    +L LNP  +      L +P+P  T E R
Sbjct: 157 AQVIPKGGRMVTILVGEEEFIKPITSALQAVPSLSLNPQPDPHNKLQLNLPIPPPTRESR 216

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKK-SRKSGKASEDMVASLENDIQKITDSTIK 170
              VK A A  EK+  SV+N R +    LK    K     +D+  +LE  ++K+ +   K
Sbjct: 217 DQAVKDAKAAMEKASASVKNARANMNKKLKALGNKKAVRPDDLRKALEQ-MEKLAEKGQK 275

Query: 171 NIDSFFEEKKKEI 183
           ++   FE  KK +
Sbjct: 276 DVKDAFESAKKAL 288


>gi|194247969|dbj|BAG55427.1| hypothetical protein [chlorophyte sp. MBIC11204]
          Length = 158

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 48/79 (60%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
            IDL   +  M  +I  L+  + +LR GR SP MLD +KV+ YG  + L  + +V+V + 
Sbjct: 80  AIDLGETQRAMESSIERLQGILGSLRAGRASPGMLDTLKVDVYGERMSLKSIGSVSVRDQ 139

Query: 64  RMLVVSVWDKEMVASVERG 82
           +MLVVS +D + + ++E+ 
Sbjct: 140 QMLVVSAFDPQTLPNIEKA 158


>gi|303321624|ref|XP_003070806.1| ribosomal recycling factor, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240110503|gb|EER28661.1| ribosomal recycling factor, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320040287|gb|EFW22220.1| ribosome recycling factor [Coccidioides posadasii str. Silveira]
          Length = 291

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 15/193 (7%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE---AYGSH-----VPLNQV 55
            D  ++ + + D +S LK+D+  LR G R++P +++ V+V    + GS      V L+++
Sbjct: 97  FDFSSLSNGIQDALSRLKEDVSKLRVGGRLNPELIENVRVTLKTSAGSGKEKETVRLSEL 156

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHE-SNLGLNPIVEGQ---VLRIPVPETTEERR 111
           A V     RM+ + V ++E +  +   +    +L LNP  +      L +P+P  T E R
Sbjct: 157 AQVIPKGGRMVTILVGEEEFIKPITSALQAVPSLSLNPQPDPHNKLQLNLPIPPPTRESR 216

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKK-SRKSGKASEDMVASLENDIQKITDSTIK 170
              VK A A  E++  SV+N R +    LK    K     +D+  +LE  ++K+ +   K
Sbjct: 217 DQAVKDAKAAMERASASVKNARANMNKKLKALGNKKAVRPDDLRKALEQ-MEKLAEKGQK 275

Query: 171 NIDSFFEEKKKEI 183
           ++   FE  KK +
Sbjct: 276 DVKDSFESAKKAL 288


>gi|325973353|ref|YP_004250417.1| ribosome recycling factor [Mycoplasma suis str. Illinois]
 gi|323651955|gb|ADX98037.1| ribosome recycling factor [Mycoplasma suis str. Illinois]
          Length = 195

 Score = 58.2 bits (139), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 9/160 (5%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D ++IK RM + +             R++P+    ++VE  G+ V L+++A V + + R+
Sbjct: 24  DFEHIKKRMNEKLE-------EFTISRLNPTHFYSLQVEYEGNLVSLSEIALVNLEKARL 76

Query: 66  LVVSVW--DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           L +  +   +++   +E+ I ++   L   ++   LR  +PE T+E R   +K      E
Sbjct: 77  LTIKPYLPSQKITHDIEKAIKKAKPNLTINIKDNELRCSIPEPTQEIREEKIKSGKQIVE 136

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQK 163
           ++KI++RN R+D   + K S +S          L+ +I K
Sbjct: 137 EAKIALRNKRKDLQKYFKNSVQSENQKHSHREQLDKEISK 176


>gi|328779227|ref|XP_623856.3| PREDICTED: ribosome-recycling factor, mitochondrial-like [Apis
           mellifera]
          Length = 205

 Score = 57.8 bits (138), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 4/123 (3%)

Query: 63  PRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           P M++++V    ++V S+   + +S + LNP  EG  + IP+P+ T+E R  L K+A  Y
Sbjct: 84  PNMIILNVSAFPQIVPSILEALSKSQMNLNPQQEGTTIYIPIPKITKEHREVLTKMAKQY 143

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
             K K  + +IR + +  LK    + K   D++   E+ I       +K  +   + K+K
Sbjct: 144 FNKCKDIISDIRNEYVKELKNYENAPK---DLIFKAEDYINVTQKEYVKKAEQLLKSKQK 200

Query: 182 EIM 184
           E++
Sbjct: 201 ELL 203


>gi|325989788|ref|YP_004249487.1| ribosome-recycling factor [Mycoplasma suis KI3806]
 gi|323574873|emb|CBZ40533.1| Ribosome-recycling factor [Mycoplasma suis]
          Length = 195

 Score = 57.8 bits (138), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 9/160 (5%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D ++IK RM + +             R++P+    ++VE  G+ V L+++A V + + R+
Sbjct: 24  DFEHIKKRMNEKLE-------EFAISRLNPTHFYSLQVEYEGNLVSLSEIALVNLEKARL 76

Query: 66  LVVSVW--DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           L +  +   +++   +E+ I ++   L   ++   LR  +PE T+E R   +K      E
Sbjct: 77  LTIKPYLPSQKITHDIEKSIKKAKPNLTINIKDNELRCSIPEPTQEIREEKIKSGKQIVE 136

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQK 163
           ++KI++RN R+D   + K S +S          L+ +I K
Sbjct: 137 EAKIALRNKRKDLQKYFKNSVQSENQKHSHREQLDKEISK 176


>gi|300121780|emb|CBK22354.2| unnamed protein product [Blastocystis hominis]
          Length = 142

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 7/147 (4%)

Query: 37  MLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG 96
           M+  +KVE  G    ++ +A V         +S  +   ++ V + +  S+L LNP ++ 
Sbjct: 1   MIGQLKVELDGKSAVMSSIAQVAANTQ----ISYLN---LSFVVKTLKSSDLNLNPQIDK 53

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
             +RI +P+TT+E R  ++K      E+ K  +R +R+  MD ++   K+   S+D ++S
Sbjct: 54  NSVRIQIPKTTKETRQKMIKQVALECEQQKSKLRAVRKRYMDKVRVIEKNVSISKDDISS 113

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++  I +ITD   K +    + K+KE+
Sbjct: 114 MKKKIDEITDRVSKEMAEMMKRKEKEL 140


>gi|317157882|ref|XP_003190900.1| ribosome recycling factor [Aspergillus oryzae RIB40]
          Length = 272

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 7/185 (3%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE-AYGSH--VPLNQVANVTVL 61
           DL  + D +   +  LK D+  LR G R++   +  ++V+ + G    V L ++A V   
Sbjct: 85  DLAQLHDGIAAAVCRLKDDLSKLRVGGRLNTDAIASLRVQLSKGGKETVKLGELAQVVPK 144

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVA 118
             RM+ +   +++ +  +   +  S+L L P  +      L IP+P  T+E R   V VA
Sbjct: 145 GGRMVTILATEEDHIKPITSAVVSSDLSLTPQPDAHNSLQLNIPIPPPTKESRDQTVSVA 204

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A  EK+  +VR+ R      L+  +K   A  D V   +  ++K+T+   + +   FE 
Sbjct: 205 KAAMEKATAAVRDSRGSVHKRLQDMQKKKIARPDDVRKAQEQMEKVTEKGQREVRDLFEA 264

Query: 179 KKKEI 183
            KK +
Sbjct: 265 AKKAM 269


>gi|321466374|gb|EFX77370.1| hypothetical protein DAPPUDRAFT_305846 [Daphnia pulex]
          Length = 288

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 87/168 (51%), Gaps = 3/168 (1%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           +++ + ++K  +   +  LK D +   + R +   ++ +K++  G    L ++A +    
Sbjct: 105 ELVKVSSLKQDLQKGLDQLKSDYVKHLSLRSASGSIENLKIDYEGETYTLQEIAQIGKKG 164

Query: 63  PRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
            ++LVV++     ++  V + I++S +GLNP  +G  + IP+P+ T E R  L K A   
Sbjct: 165 SQLLVVNLSGFPTLMRDVLKAINDSGMGLNPQQDGTKIFIPIPKVTREYRENLAKNAKTM 224

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTI 169
            +K K   R+I+   +  +KK  K  + S D+  S++  IQ +T+  +
Sbjct: 225 FQKFKDHSRDIQNRYIRDVKKKEK--EVSSDLSHSVQQQIQTMTEQYV 270


>gi|242022121|ref|XP_002431490.1| ribosome recycling factor, putative [Pediculus humanus corporis]
 gi|212516778|gb|EEB18752.1| ribosome recycling factor, putative [Pediculus humanus corporis]
          Length = 248

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 7/177 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N+ ++ + + D +   I   K D++   + R S   ++  K+   G+   +  +A +  
Sbjct: 62  LNEYLNFEKLIDDINRPIESFKDDLIQQVSLRSSIGAIENTKIVYDGNPYTIQDLAEINK 121

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+M V+      + + +V +   ES+L LN   EG  L +P+P+ T E R  L K A 
Sbjct: 122 KNPKMFVLDFSCFPDAIGTVVKTFQESHLNLNVQQEGTKLIVPIPKVTREHRELLAKKAK 181

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSG-----KASEDMVASLENDIQKITDSTIKN 171
            Y  K K S+R ++      L    K G     + +E +VA  +  I KI +  +KN
Sbjct: 182 MYFVKCKDSIREVQMKYTKKLNNVEKLGSEVKFRITEQLVALGDKHI-KIAEDMLKN 237


>gi|238508549|ref|XP_002385466.1| Hsp70 chaperone (HscA), putative [Aspergillus flavus NRRL3357]
 gi|220688985|gb|EED45337.1| Hsp70 chaperone (HscA), putative [Aspergillus flavus NRRL3357]
          Length = 886

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 7/183 (3%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE-AYGSH--VPLNQVANVTVL 61
           DL  + D +   +  LK D+  LR G R++   +  ++V+ + G    V L ++A V   
Sbjct: 699 DLAQLHDGIAAAVCRLKDDLSKLRVGGRLNTDAIASLRVQLSKGGKETVKLGELAQVVPK 758

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVA 118
             RM+ +   +++ +  +   +  S+L L P  +      L IP+P  T+E R   V VA
Sbjct: 759 GGRMVTILATEEDHIKPITSAVVSSDLSLTPQPDAHNSLQLNIPIPPPTKESRDQTVSVA 818

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A  EK+  +VR+ R      L+  +K   A  D V   +  ++K+T+   + +   FE 
Sbjct: 819 KAAMEKATAAVRDSRGSVHKRLQDMQKKKIARPDDVRKAQEQMEKVTEKGQREVRDLFEA 878

Query: 179 KKK 181
            KK
Sbjct: 879 AKK 881


>gi|114690063|ref|XP_001138129.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 209

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 1/106 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I   K +       R SP  LD + V      + LNQ+  ++V  P
Sbjct: 82  IINLEEVNEEMKSVIEAHKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQIRQISVKLP 141

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTE 108
           ++++V++    E   +  + I ES + LNP VEG ++R+P+P+ ++
Sbjct: 142 QLILVNMASFPECTVAAIKAIRESGMNLNPEVEGTLIRVPIPQISQ 187


>gi|315302963|ref|ZP_07873687.1| ribosome-recycling factor [Listeria ivanovii FSL F6-596]
 gi|313628668|gb|EFR97077.1| ribosome-recycling factor [Listeria ivanovii FSL F6-596]
          Length = 77

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 45/71 (63%)

Query: 7  LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
          L   K++M      L +   T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6  LSKSKEKMEKAEQALTRQFGTIRAGRANASLLDRLTVDYYGAPTPVNQMASISVPEARML 65

Query: 67 VVSVWDKEMVA 77
          +++ +DK ++ 
Sbjct: 66 LITPYDKTILG 76


>gi|258575539|ref|XP_002541951.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237902217|gb|EEP76618.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 249

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 18/193 (9%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEA-YGS----HVPLNQVANV 58
           +D  ++ + + D +S LK+D+  LR G R++P +++ V+V    GS     V LN++A V
Sbjct: 58  LDFSSLTNGIQDAVSRLKEDISKLRPGGRLNPELIENVRVTVKSGSTGKESVKLNELAQV 117

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHE-SNLGLNPIVEGQ---VLRIPVPETTEERRLAL 114
                R + + + +++    V   +    +L LNP  +      L +P+P  T E R  +
Sbjct: 118 IPKGGRTITILLGEEDYAKPVTSALQAMPSLSLNPQQDPHNKLQLNVPIPPPTRESRDQV 177

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKA----SEDMVASLENDIQKITDSTIK 170
           +K A A  EK+  +V+N R    +  KK + +G       +D+  +LE  ++KIT    K
Sbjct: 178 LKEAKAAMEKASTTVKNAR---ANLNKKFKAAGNKKVVRPDDLHKALE-QMEKITAKGQK 233

Query: 171 NIDSFFEEKKKEI 183
            +   FE  KK +
Sbjct: 234 EVKDAFEAAKKAL 246


>gi|149019534|ref|ZP_01834853.1| ribosome recycling factor [Streptococcus pneumoniae SP23-BS72]
 gi|147930909|gb|EDK81889.1| ribosome recycling factor [Streptococcus pneumoniae SP23-BS72]
          Length = 74

 Score = 55.1 bits (131), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 1  MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
          M  VI ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+
Sbjct: 1  MANVI-IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITI 59

Query: 61 LEPRMLVV 68
           E R+L+V
Sbjct: 60 PEARVLLV 67


>gi|299749683|ref|XP_001836265.2| hypothetical protein CC1G_06350 [Coprinopsis cinerea okayama7#130]
 gi|298408550|gb|EAU85637.2| hypothetical protein CC1G_06350 [Coprinopsis cinerea okayama7#130]
          Length = 254

 Score = 54.3 bits (129), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 92/177 (51%), Gaps = 20/177 (11%)

Query: 14  MGDTISFLKKDMMTLRT---GRVSPSMLDLVKVEAYGSH---VPLNQVANVTVLEPRMLV 67
           M + + + KK+     T   GR++P++L  V+V+  GS      L ++A V V E   L+
Sbjct: 84  MKNAVDWFKKECAGYETRASGRITPAILSPVRVK-LGSDPKDYRLEELATVGVREGSTLL 142

Query: 68  VSVWDKEMVASVERGIHESNL-GLNPIVE-GQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           ++++D+  +  +E  +H   + G+ P  +  + +++P+P+ T E RL+L   A   AE+ 
Sbjct: 143 ITLFDEHNMKHIESALHTCGIPGVVPHRQDNRTIKVPIPKPTVESRLSLYAAAKKKAEEI 202

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLE-NDIQKITDSTIKNIDSFFEEKKK 181
           ++ V   RR     LK+    GK  +    S+E  + QK+TD  I  +D   ++ +K
Sbjct: 203 RVQV---RRQHSTSLKR----GKFEKH---SIEIEEFQKLTDRYIGEVDKILKDLQK 249


>gi|309800200|ref|ZP_07694383.1| ribosome recycling factor [Streptococcus infantis SK1302]
 gi|308116171|gb|EFO53664.1| ribosome recycling factor [Streptococcus infantis SK1302]
          Length = 75

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 37/57 (64%)

Query: 11 KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
          K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+ V
Sbjct: 10 KERMTQSHHSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVFV 66


>gi|195167879|ref|XP_002024760.1| GL22438 [Drosophila persimilis]
 gi|194108165|gb|EDW30208.1| GL22438 [Drosophila persimilis]
          Length = 105

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 81  RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           R I +S + LNP  +G  L IP+P+ ++  R  L K A A   K + ++RN++    DH+
Sbjct: 2   RAIAKSGMNLNPQQDGTTLFIPIPKVSKVHRENLSKNAKALFVKYRDAIRNVQN---DHI 58

Query: 141 KKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K +K     +D   + +  +  I D  I   D     K+KE++
Sbjct: 59  RKLKKQPDVGQDDAFAAQTQVTAIGDKFIAEADKLLASKQKELL 102


>gi|254573108|ref|XP_002493663.1| Mitochondrial ribosome recycling factor [Pichia pastoris GS115]
 gi|238033462|emb|CAY71484.1| Mitochondrial ribosome recycling factor [Pichia pastoris GS115]
          Length = 247

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 16/186 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+ I+DR   T+   +K +  ++ G+ +P + D +KV       P   VA  T  + R L
Sbjct: 69  LKEIEDRFKLTLQEHQKKINEIKLGKSNPKIFDSLKVSIAKDLQPFPSVAQTTS-KGRNL 127

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVE---GQVLRIPVPETTEERRLALVKVAHAYAE 123
           +V+V+D  +V  V   I  S L LNP V+    Q+L++P+   T E +   +K      E
Sbjct: 128 LVTVFDPSLVKYVVSSILSSGLNLNPEVDPKNPQLLKVPLTAPTAETKKETLKALKNNLE 187

Query: 124 KSKISVRN------IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFE 177
             + S+ N      IR   +   K ++      ED +  L N+I+K+      +I   F+
Sbjct: 188 HYRHSITNKHSLASIRAHYLKEFKGNK------EDSIKKLVNEIEKVHKDYSNSIHEQFK 241

Query: 178 EKKKEI 183
           + +K +
Sbjct: 242 KVEKTL 247


>gi|227547148|ref|ZP_03977197.1| possible protein-synthesizing GTPase [Bifidobacterium longum
          subsp. infantis ATCC 55813]
 gi|227212367|gb|EEI80263.1| possible protein-synthesizing GTPase [Bifidobacterium longum
          subsp. infantis ATCC 55813]
          Length = 68

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 34/54 (62%)

Query: 13 RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
          RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L
Sbjct: 12 RMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTL 65


>gi|190347462|gb|EDK39732.2| hypothetical protein PGUG_03830 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 255

 Score = 52.4 bits (124), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 9/137 (6%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  + K +M + I    K     + GR SPS+ D + V+      P   VA  T ++ R
Sbjct: 71  IDFDDAKRKMNEVIEKFSKSANEAKLGRTSPSIFDHLSVDTEFGPQPFTSVAQ-TSIKGR 129

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVE---GQVLRIPVPETTEERRLALVKVAHAY 121
             +++V+D     S+   +  SNL +NP V+      L++P+P  T E +    K     
Sbjct: 130 NFLITVFDTANSQSIINAVLGSNLNMNPQVDPSNKSALKVPLPPLTVESKKESAKQLKGV 189

Query: 122 AEK-----SKISVRNIR 133
            EK      K+++ +IR
Sbjct: 190 YEKFKNGSGKLTLASIR 206


>gi|225711692|gb|ACO11692.1| Ribosome recycling factor, mitochondrial precursor [Caligus
           rogercresseyi]
          Length = 260

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 23/184 (12%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +LQ   D + D  +    + +T+R    S + LD + +   G   PL+++A ++  + + 
Sbjct: 85  ELQGSYDDLMDHFA----NNLTMR----STNSLDKLPINFEGDVYPLHELAQISKKDAKR 136

Query: 66  LVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           L++       +V+ V + I ESN+ L P  +G  L +P+P+ T E R  L K A A   K
Sbjct: 137 LIIDCSSFPGLVSPVSKAISESNMNLRPQADGDRLFVPIPKVTREYREQLSKGAKASFLK 196

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLE----NDIQKITDSTIKNIDSFFEEKK 180
           +K   R I+ + +           A++++  S E     D Q + +  I+++ + F  + 
Sbjct: 197 AKEGFRRIQNNYIS----------AAQNVAMSPECRVPKDKQHMVEEIIRSVANDFAHRA 246

Query: 181 KEIM 184
           +EI+
Sbjct: 247 EEIL 250


>gi|301126635|ref|XP_002909859.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101705|gb|EEY59757.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 109

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 99  LRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLE 158
           L I  P+ ++E R  L+K     AE+++  VR +R+D M+H KK + +   SED V   +
Sbjct: 24  LEISFPKMSKETRADLLKATKKQAEQARQHVRRVRQDAMNHAKKLKDA--VSEDDVEVQK 81

Query: 159 NDIQKITDSTIKNIDSFFEEKKKEI 183
             IQK TDS I  ID     K+K++
Sbjct: 82  ERIQKATDSAIAEIDKLLAAKEKDL 106


>gi|198419631|ref|XP_002119431.1| PREDICTED: similar to mitochondrial ribosome recycling factor
           [Ciona intestinalis]
          Length = 270

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 91/190 (47%), Gaps = 16/190 (8%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMT--LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +V+DL  +++ M   + FL+ D  T   + G    S+ + + +       PLN++  ++ 
Sbjct: 88  EVLDLLEVENEMKKCVLFLQ-DAYTKEFKVG-ADLSIFEQMTINIENDQYPLNEIGQISK 145

Query: 61  LEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
              RM+VV +    + +   E  I +SN+ LNP   G ++++ +P+ T E R  + K A 
Sbjct: 146 PTQRMIVVDMESFPQYIKEAEAVIRDSNMNLNPNTTGTLIKVAIPQVTAEYRQLVAKKAK 205

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS----F 175
                    +RNI+   M+      K  K  E +  +LE+ I++     +++  +     
Sbjct: 206 ERLNLCNEKLRNIK--AMN-----EKLAKNHEGLTENLEHGIKEQLSVYLEHYKTKAMEV 258

Query: 176 FEEKKKEIMH 185
           ++ K+KE++H
Sbjct: 259 YKAKEKELLH 268


>gi|320584172|gb|EFW98383.1| Mitochondrial ribosome recycling factor [Pichia angusta DL-1]
          Length = 223

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 8/180 (4%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+++  +    +   KK +  ++ G+  P + + +KV      VP   +A  T L+ + L
Sbjct: 48  LKDVDTQFQSVLDKYKKKITEIKLGKADPQIFNKLKVRVENGTVPFTDIAQTT-LKGKFL 106

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEG---QVLRIPVPETTEERRLALVKVAHAYAE 123
            ++V+D +    +   I  +NL LN   +    Q+LR+ +P TT++ +    K       
Sbjct: 107 TITVFDPKNSKRIISAILGTNLNLNAEEDPKNPQLLRVALPSTTKDLKEKQAKELKENFN 166

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
             K S  +IR   +  LKK R     S D +  L NDI+K   +  + + + ++E +K +
Sbjct: 167 IFKASSASIRAQVLKDLKKVR----GSADTLRKLLNDIEKTHKNYTEKLTNAYKEAEKSL 222


>gi|328723889|ref|XP_001942966.2| PREDICTED: ribosome-recycling factor, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 274

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 4/175 (2%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +K  M   ++ LK + +   + R S   LD + V   G    +  +A +    P+ ++++
Sbjct: 99  MKTEMEKAVAALKNNYIKNLSLRSSTGALDSLPVTFEGDEYVIQDLAQIVRKNPKTIILN 158

Query: 70  VWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +    + + +V   +  S + LNP  +   + IP+P+ T+E R  L K A A   K+K S
Sbjct: 159 MTSFPQAIPAVLESLKASGMNLNPQQDKTSIFIPIPKVTKEHRENLSKGAKALFIKTKDS 218

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++ ++   +  LK    +   + D+V +L++ I  + D  +       EEK+ E+
Sbjct: 219 IKELQNKNIKVLK---DNDALATDLVHTLQDQITALADKYVLEAQRIMEEKQSEL 270


>gi|328718680|ref|XP_001942916.2| PREDICTED: ribosome-recycling factor, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 176

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 4/175 (2%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +K  M   ++ LK + +   + R S   LD + V   G    +  +A +    P+ ++++
Sbjct: 1   MKTEMEKAVAALKNNYIKNLSLRSSTGALDSLPVTFEGDEYVIQDLAQIVRKNPKTIILN 60

Query: 70  VWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +    + + +V   +  S + LNP  +   + IP+P+ T+E R  L K A A   K+K S
Sbjct: 61  MTSFPQAIPAVLESLKASGMNLNPQQDKTSIFIPIPKVTKEHRENLSKGAKALFIKTKDS 120

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++ ++   +  LK    +   + D+V +L++ I  + D  +       EEK+ E+
Sbjct: 121 IKELQNKNIKVLK---DNDALATDLVHTLQDQITALADKYVLEAQRIMEEKQSEL 172


>gi|332027531|gb|EGI67608.1| Ribosome-recycling factor, mitochondrial [Acromyrmex echinatior]
          Length = 146

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 78/146 (53%), Gaps = 5/146 (3%)

Query: 40  LVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQV 98
           ++ V+  G    L ++A ++  +P+++V++V    + +  + + + ++ + LNP  +G  
Sbjct: 1   MLSVKFDGKDFTLQELAKIS-RKPKLIVLNVSTFPQAIPDILKSLTKNQMKLNPQQDGTT 59

Query: 99  LRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLE 158
           + +P+P+ T+E+R  L K A ++  K   +VR +R   +  +K+  K  K   D+V  +E
Sbjct: 60  IYVPIPKVTKEQREILSKNAKSFYVKCCDNVRQVRNKQIKAVKQKEKLAK---DLVFRIE 116

Query: 159 NDIQKITDSTIKNIDSFFEEKKKEIM 184
           + I  ++       +   E K+KE++
Sbjct: 117 SYIDILSHQYTNKAEQMLETKQKELL 142


>gi|67925885|ref|ZP_00519171.1| ribosome releasing factor [Crocosphaera watsonii WH 8501]
 gi|67852264|gb|EAM47737.1| ribosome releasing factor [Crocosphaera watsonii WH 8501]
          Length = 56

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 37/53 (69%)

Query: 7  LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
          L ++KD M  ++   ++   T+RTGR +P++LD V V+ YG+  PLNQ+AN++
Sbjct: 2  LDDLKDNMQKSVEATQRSFNTIRTGRANPAILDRVTVDYYGTETPLNQLANIS 54


>gi|307568226|pdb|3LF9|A Chain A, Crystal Structure Of Hiv Epitope-Scaffold
           4e10_d0_1is1a_001_c
          Length = 121

 Score = 51.2 bits (121), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           TEERR  LVK+    AE  +++VRNI RD  + L    K  + +   ++    +IQK+TD
Sbjct: 34  TEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDKEVNWFDISQALWEIQKLTD 93

Query: 167 STIKNIDSFFEEKKKEIMH 185
             +K ID     K+KE+M 
Sbjct: 94  VAVKKIDEVLAAKEKELME 112


>gi|255948524|ref|XP_002565029.1| Pc22g10210 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592046|emb|CAP98309.1| Pc22g10210 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 269

 Score = 51.2 bits (121), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 7/186 (3%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGSH---VPLNQVANVTV 60
            DL  + + +   ++ LK D+  LR G R + ++L+ ++V+        V L  +A V  
Sbjct: 81  FDLSQLHNGISTAVARLKDDLSKLRAGGRFNTAVLESLRVQLSKDSKDSVKLGDLAQVVP 140

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKV 117
              RM+ +   +++ +  +   I  SNL L P  +      L IP+P  T+E R   V+ 
Sbjct: 141 KGGRMVTLLAAEEDHLKPLTSAIVSSNLSLTPQPDPHNALQLNIPIPPPTKESRDKNVQA 200

Query: 118 AHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFE 177
           A    EK+   VR+ R      L+  +K   A  D V    + ++K+T+   K +   FE
Sbjct: 201 AKQAFEKAAGVVRDSRGAMHKRLQDMQKKKLARPDDVRKAHDQMEKVTEQGQKEVKDAFE 260

Query: 178 EKKKEI 183
             KK +
Sbjct: 261 GAKKTL 266


>gi|237831449|ref|XP_002365022.1| hypothetical protein TGME49_057980 [Toxoplasma gondii ME49]
 gi|211962686|gb|EEA97881.1| hypothetical protein TGME49_057980 [Toxoplasma gondii ME49]
 gi|221487127|gb|EEE25373.1| ribosome recycling factor, putative [Toxoplasma gondii GT1]
 gi|221506812|gb|EEE32429.1| ribosome recycling factor, putative [Toxoplasma gondii VEG]
          Length = 290

 Score = 51.2 bits (121), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 71/119 (59%), Gaps = 9/119 (7%)

Query: 74  EMVASVERGIHESNLGL-----NPIVEGQV----LRIPVPETTEERRLALVKVAHAYAEK 124
           +++A++E+ +  ++LGL     N   +G      L +  P  T+ERRL LV  A A AE+
Sbjct: 169 QLLAAIEKALSTASLGLSVRTRNADEKGTKRQMELLVDFPPLTQERRLQLVSEAKAEAEE 228

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            ++ +R +RRD ++ L+  +K+G   ED ++ L++ +Q++T+  I  IDS    K+K++
Sbjct: 229 GRVVLRRLRRDLVEELRGVKKAGGIGEDRISKLQDRVQQVTEKKIAEIDSALASKEKQL 287


>gi|50424817|ref|XP_460998.1| DEHA2F14630p [Debaryomyces hansenii CBS767]
 gi|60390377|sp|Q6BLC3|RRF1_DEBHA RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|49656667|emb|CAG89364.1| DEHA2F14630p [Debaryomyces hansenii]
          Length = 257

 Score = 50.8 bits (120), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 6/115 (5%)

Query: 2   NQV--IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           NQV  ID  +  ++    I    K     + G+ SP++ D + VE     V    VA  T
Sbjct: 64  NQVPEIDFDDATNKFKGVIERFSKQANEAKLGKTSPNIFDKLIVETANGEVGFTSVAQTT 123

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG---QVLRIPVPETTEERR 111
           V + R  +++V+D   V S+   +  S+L +NP ++    Q L++P+P  T E +
Sbjct: 124 V-KGRNFMITVFDPSNVKSIINAVLGSDLNMNPQIDPSNKQTLKVPLPPLTTESK 177


>gi|327304937|ref|XP_003237160.1| ribosome recycling factor [Trichophyton rubrum CBS 118892]
 gi|326460158|gb|EGD85611.1| ribosome recycling factor [Trichophyton rubrum CBS 118892]
          Length = 295

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 23/201 (11%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAY--GS------------- 48
            D  ++ D + D +S LK+D+  LR G RV+P  ++ ++V  +  GS             
Sbjct: 94  FDFSSLNDSIKDAVSRLKEDLAKLRGGGRVTPEAIENLRVSLHKPGSVDVGKGKKGASSS 153

Query: 49  ---HVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIP 102
               V L +VA+V     R + + V ++  V  V   I  S+L LNP  +      L +P
Sbjct: 154 SKETVKLGEVASVIPKGGRSVSILVGEEHDVKHVMSAIISSDLSLNPQTDPHNLLQLNVP 213

Query: 103 VPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
           +P  T+E R   VK A    E++   VRN R      LK         +D+  +++  ++
Sbjct: 214 IPPPTKESREQTVKDAKIAMERASNIVRNGRAALNKKLKGKELKKLRPDDVRKAIDQ-ME 272

Query: 163 KITDSTIKNIDSFFEEKKKEI 183
           KI++   K +   FE  KK +
Sbjct: 273 KISEKGQKEVKDVFEAAKKAL 293


>gi|326471947|gb|EGD95956.1| ribosome recycling factor [Trichophyton tonsurans CBS 112818]
          Length = 295

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 23/201 (11%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAY------------GSH-- 49
            D  ++ D + D ++ LK+D+  LR+G RV+P  ++ ++V  +            G+   
Sbjct: 94  FDFSSLNDSIKDAVTRLKEDLAKLRSGGRVTPEAIENLRVSLHKPGGADVGKGKKGASSS 153

Query: 50  ----VPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIP 102
               V L +VA+V     R + + V ++  V  V   I  S+L LNP  +      L +P
Sbjct: 154 SKETVKLGEVASVIPKGGRSVSILVGEEHDVKPVMSAITSSDLSLNPQTDPHNPLQLNVP 213

Query: 103 VPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
           +P  T+E R   V+ A    EK+   VRN R      LK         +D+  +++  ++
Sbjct: 214 IPPPTKESREQTVRDAKVAMEKASNIVRNGRAALNKKLKGKELKKLRPDDVRKAVDQ-ME 272

Query: 163 KITDSTIKNIDSFFEEKKKEI 183
           KI +   K +   FE  KK +
Sbjct: 273 KIAEKGQKEVKDVFEAAKKAL 293


>gi|260944354|ref|XP_002616475.1| hypothetical protein CLUG_03716 [Clavispora lusitaniae ATCC 42720]
 gi|238850124|gb|EEQ39588.1| hypothetical protein CLUG_03716 [Clavispora lusitaniae ATCC 42720]
          Length = 246

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 4/115 (3%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID+  +  R+   I    K     + G+ +P + D ++VE          VA  T L+ R
Sbjct: 58  IDMDEVTKRLQSVIDKFAKHANEAKLGKTNPQIFDHLQVETADGEAVFTSVAQ-TALKGR 116

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEG---QVLRIPVPETTEERRLALVK 116
             +++V+D      V   +  S+L +NPI +    Q+L++P+P  T E +   VK
Sbjct: 117 NFIITVFDPANTKHVVNAVLASDLNMNPIADPSNKQMLKVPLPPVTTESKKENVK 171


>gi|302506647|ref|XP_003015280.1| hypothetical protein ARB_06403 [Arthroderma benhamiae CBS 112371]
 gi|291178852|gb|EFE34640.1| hypothetical protein ARB_06403 [Arthroderma benhamiae CBS 112371]
          Length = 295

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 23/201 (11%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAY------------GSH-- 49
            D  ++ D + D ++ LK+D+  LR G RV+P  ++ ++V  +            G+   
Sbjct: 94  FDFSSLNDSIKDAVTRLKEDLAKLRGGGRVTPEAIENLRVSLHKPGGADVGKGKKGASSS 153

Query: 50  ----VPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIP 102
               V L +VA+V     R + + V ++  V  V   I  S+L LNP  +      L +P
Sbjct: 154 SKETVKLGEVASVIPKGGRSVSILVGEEHDVKPVMSAITSSDLSLNPQPDPHNPLQLNVP 213

Query: 103 VPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
           +P  T+E R   VK A    EK+   VRN R      LK         +D+  +++  ++
Sbjct: 214 IPPPTKESREQTVKDAKVAMEKASNIVRNGRAALNKKLKGKELKKLRPDDVRKAIDQ-ME 272

Query: 163 KITDSTIKNIDSFFEEKKKEI 183
           KI +   K +   FE  KK +
Sbjct: 273 KIAEKGQKEVKDVFEAAKKAL 293


>gi|302666357|ref|XP_003024779.1| hypothetical protein TRV_01061 [Trichophyton verrucosum HKI 0517]
 gi|291188849|gb|EFE44168.1| hypothetical protein TRV_01061 [Trichophyton verrucosum HKI 0517]
          Length = 295

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 23/201 (11%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAY------------GSH-- 49
            D  ++ D + D ++ LK+D+  LR G RV+P  ++ ++V  +            G+   
Sbjct: 94  FDFSSLNDSIKDAVTRLKEDLAKLRGGGRVTPEAIENLRVSLHKPGGADVGKGKKGASSS 153

Query: 50  ----VPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIP 102
               V L +VA+V     R + + V ++  V  V   I  S+L LNP  +      L +P
Sbjct: 154 SKETVKLGEVASVIPKGGRSVSILVGEEHDVKPVMSAITSSDLSLNPQPDPHNPLQLNVP 213

Query: 103 VPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
           +P  T+E R   VK A    EK+   VRN R      LK         +D+  +++  ++
Sbjct: 214 IPPPTKESREQTVKDAKVAMEKASNIVRNGRAALNKKLKGKELKKLRPDDVRKAIDQ-ME 272

Query: 163 KITDSTIKNIDSFFEEKKKEI 183
           KI +   K +   FE  KK +
Sbjct: 273 KIAEKGQKEVKDVFEAAKKAL 293


>gi|324522561|gb|ADY48080.1| Ribosome-recycling factor [Ascaris suum]
          Length = 267

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 47  GSHVPLNQVANVTVLEPRMLVVSVWDK-EMVASVERGIHESNLGLNPIVEGQVLRIPVPE 105
           G    +N++  VT+  P+M++++  D    + + +  + +SNL +NP  EG  L +PVP+
Sbjct: 128 GEEHKMNRLGRVTLKSPQMVMINFGDNPTAIKAAKLALQKSNLNVNPQQEGVTLYVPVPK 187

Query: 106 TTEERRLALVKVAHA 120
            T ERR  L   A A
Sbjct: 188 MTRERREYLASTAKA 202


>gi|170096781|ref|XP_001879610.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164645013|gb|EDR09261.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 227

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 13/148 (8%)

Query: 30  TGRVSPSMLDLVKVEAYGSH--VPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN 87
           +GRV+P++L  V+V+   +     L ++A V V +   L+++++D+  +  VE  +H   
Sbjct: 75  SGRVTPALLSPVRVKLPSAEKEFKLEELATVGVRDGTTLLITLFDEHTIKHVESALHTCK 134

Query: 88  L-GLNP-IVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRK 145
           + G+ P   + + ++IP+P+ T + R AL   A   AE+ ++ +R            S K
Sbjct: 135 IPGVVPHRYDDRTIKIPIPKPTVDARHALYAAAKRKAEEMRVQIRK-------QHSLSVK 187

Query: 146 SGKASEDMVASLENDIQKITDSTIKNID 173
            GK  +  V  LE + QK+TD  I  +D
Sbjct: 188 RGKFEKHSV-ELE-EFQKLTDRYIGEVD 213


>gi|315046034|ref|XP_003172392.1| hypothetical protein MGYG_04984 [Arthroderma gypseum CBS 118893]
 gi|311342778|gb|EFR01981.1| hypothetical protein MGYG_04984 [Arthroderma gypseum CBS 118893]
          Length = 295

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 23/201 (11%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAY---GSHVP--------- 51
            D  ++ D + D ++ LK+D+  LR G RV+P  ++ ++V  +   G+ V          
Sbjct: 94  FDFSSLHDSIKDAVTRLKEDLSKLRGGGRVTPEAIENLRVSLHKVGGAEVGKGKKGASSS 153

Query: 52  ------LNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIP 102
                 L ++A+V     R + + V ++  V  V   I  S+L LNP  +      L + 
Sbjct: 154 SKDTARLGEIASVIPKGGRSVSILVGEEHDVKPVMSAITASDLSLNPQADPHNPLQLNVA 213

Query: 103 VPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
           +P  T+E R   VK A A  EK+   VRN  R  ++   K +   KA  D V    + ++
Sbjct: 214 IPPPTKESREQTVKDAKAAMEKASNIVRN-GRAALNKKLKGKDLKKARPDDVRKAVDQME 272

Query: 163 KITDSTIKNIDSFFEEKKKEI 183
           KI +   K++   FE  KK +
Sbjct: 273 KIAEKGQKDVKDVFEAAKKAL 293


>gi|326477187|gb|EGE01197.1| ribosome recycling factor [Trichophyton equinum CBS 127.97]
          Length = 295

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 23/201 (11%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAY------------GSH-- 49
            D  ++ D + D ++ LK+D+  LR+G RV+P  ++ ++V  +            G+   
Sbjct: 94  FDFSSLNDSIKDAVTRLKEDLAKLRSGGRVTPEAIENLRVSLHKPGGADVGKGKKGASSS 153

Query: 50  ----VPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIP 102
               V L +VA+V     R + + V ++  V  V   I  S+L LNP  +      L +P
Sbjct: 154 SKETVKLGEVASVIPKGGRSVSILVGEEHDVKPVMSAITSSDLSLNPQTDPHNPLQLNVP 213

Query: 103 VPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
           +P  T+E R   V+ A    EK+   VRN R      LK         +D+  +++  ++
Sbjct: 214 IPPPTKESREQTVRDAKVAMEKASNIVRNGRAALNKKLKGKELKKLRPDDVRKAVDQ-ME 272

Query: 163 KITDSTIKNIDSFFEEKKKEI 183
           KI +   K +   FE  KK +
Sbjct: 273 KIAEKGQKEVKDVFEAVKKAL 293


>gi|159163384|pdb|1WIH|A Chain A, Solution Structure Of Rsgi Ruh-021, A Domain Ii Of
           Ribosome Recycling Factor From Mouse Cdna
          Length = 84

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 31  GRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLG 89
           G    S LD + V      V LNQ+  +++  P++++V++    E  A+  + I ES + 
Sbjct: 1   GSSGSSGLDHITVVTADGKVALNQIGQISMKSPQVILVNMASFPECTAAAIKAIRESGMN 60

Query: 90  LNPIVEGQVLRIPVPETTE 108
           LNP VEG ++R+P+P+ T 
Sbjct: 61  LNPEVEGTLIRVPIPKVTS 79


>gi|328354509|emb|CCA40906.1| Ribosome-recycling factor [Pichia pastoris CBS 7435]
          Length = 223

 Score = 48.5 bits (114), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 4/128 (3%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+ I+DR   T+   +K +  ++ G+ +P + D +KV       P   VA  T  + R L
Sbjct: 69  LKEIEDRFKLTLQEHQKKINEIKLGKSNPKIFDSLKVSIAKDLQPFPSVAQTTS-KGRNL 127

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVE---GQVLRIPVPETTEERRLALVKVAHAYAE 123
           +V+V+D  +V  V   I  S L LNP V+    Q+L++P+   T E +   +K      E
Sbjct: 128 LVTVFDPSLVKYVVSSILSSGLNLNPEVDPKNPQLLKVPLTAPTAETKKETLKALKNNLE 187

Query: 124 KSKISVRN 131
             + S+ N
Sbjct: 188 HYRHSITN 195


>gi|146416959|ref|XP_001484449.1| hypothetical protein PGUG_03830 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 255

 Score = 47.8 bits (112), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  + K +M + I    K     + GR SP + D + V+      P   VA  T ++ R
Sbjct: 71  IDFDDAKRKMNEVIEKFSKLANEAKLGRTSPLIFDHLSVDTEFGPQPFTSVAQ-TSIKGR 129

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVAHAY 121
             +++V+D     S+   +  SNL +NP V+      L++P+P  T E +    K     
Sbjct: 130 NFLITVFDTANSQSIINAVLGSNLNMNPQVDPSNKLALKVPLPPLTVESKKESAKQLKGV 189

Query: 122 AEK-----SKISVRNIR 133
            EK      K+++ +IR
Sbjct: 190 YEKFKNGSGKLTLASIR 206


>gi|156053600|ref|XP_001592726.1| predicted protein [Sclerotinia sclerotiorum 1980]
 gi|154703428|gb|EDO03167.1| predicted protein [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 288

 Score = 47.8 bits (112), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV----EAYGSHVPLNQVA 56
           N   D   ++  +  ++  LK D+  LRTG R +P +L+ ++V    +A  S   L  +A
Sbjct: 96  NDPFDFSTLQTGIDKSLEKLKNDLGKLRTGGRFNPEVLEGLRVKLGKDAKESFR-LGDLA 154

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHES-NLGLNPIVEGQ---VLRIPVPETTEERRL 112
            V     R +VV V +K+ +  +   I  S  L L P+ + Q    L IP+P  T+E R 
Sbjct: 155 QVLPKGGRSVVVLVGEKDHIKPILSTIQSSPTLSLQPVPDPQNPHALNIPIPPPTKESRD 214

Query: 113 ALVKVAHAYAEKSKISVRNIRRDGMDHLKK-----------SRKSGKASEDMVASLENDI 161
           A ++ A    E +   VRN R      L+            S+K+ K  E +V     ++
Sbjct: 215 AALQAASKAGELASNGVRNARGAMQKKLRAMEVKKTVRPDDSKKAHKEMEKVVEKGNGEV 274

Query: 162 QKITDSTIKNID 173
           +K+ ++  K ++
Sbjct: 275 KKLVEAARKGME 286


>gi|164661787|ref|XP_001732016.1| hypothetical protein MGL_1284 [Malassezia globosa CBS 7966]
 gi|159105917|gb|EDP44802.1| hypothetical protein MGL_1284 [Malassezia globosa CBS 7966]
          Length = 262

 Score = 47.8 bits (112), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 8/144 (5%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTL--RTGRVSPSMLDLVKVEAYGS--HVPLNQVANVTV 60
           +DL      M   ++   + + TL    GRV  ++LD V+V        +PL+  A V V
Sbjct: 76  LDLNGTSSEMESVVARCSEHVRTLVGSLGRVDAALLDDVRVSTGKGIKPIPLHNFATVGV 135

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIV---EGQVLRIPVPETTEERRLALVKV 117
            +  +LV++ ++ E +  +E+ I+     L P +   E  V+ + VP+ T E R  L++ 
Sbjct: 136 RD-NVLVITAYEPETLKHIEKAIYAVGKDLAPQIMHDEEGVMIVHVPKPTGETRKILLQK 194

Query: 118 AHAYAEKSKISVRNIRRDGMDHLK 141
                + +K  +RN+R+    H+K
Sbjct: 195 CIKECDHAKTMLRNVRQSAQKHMK 218


>gi|153820415|ref|ZP_01973082.1| ribosome recycling factor [Vibrio cholerae NCTC 8457]
 gi|126509043|gb|EAZ71637.1| ribosome recycling factor [Vibrio cholerae NCTC 8457]
          Length = 60

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 35/59 (59%)

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           + VRNIRRD  + LK   K  + SED     + +IQK+TD+ +K ID     K+KE+M 
Sbjct: 1   MCVRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDVLAAKEKELME 59


>gi|124801048|ref|XP_001349596.1| apicoplast ribosomal releasing factor precursor, putative
           [Plasmodium falciparum 3D7]
 gi|3845171|gb|AAC71867.1| apicoplast ribosomal releasing factor precursor, putative
           [Plasmodium falciparum 3D7]
          Length = 498

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 4/179 (2%)

Query: 3   QVIDLQNI-KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
            + DL  I  ++M     FLKK+        VS  M +  KV+       +  + ++   
Sbjct: 323 HIKDLHKICSEKMNKVYEFLKKESYRFNLNNVSNDMFENEKVKINERIYTVKHICHIKKK 382

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E  +  ++ +D   V  + +   +    L   V+ + L   +P  +E  +  +       
Sbjct: 383 E-NLFTITPYDPYFVNFLYQHFIKEFDELKFYVKDKSLYAIIPPISENLKNEIKMKIKRK 441

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            E SK+++R +R+  MD L+K +   K  +D+    +N IQ I D T KNI+  F + K
Sbjct: 442 IEDSKVTLRTVRKQMMDKLEKFK--NKIGKDIYFKQKNYIQSIHDQTKKNIEKLFADTK 498


>gi|259486711|tpe|CBF84788.1| TPA: ribosome recycling factor, putative (AFU_orthologue;
           AFUA_8G03940) [Aspergillus nidulans FGSC A4]
          Length = 255

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 11/187 (5%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE-AYGSH--VPLNQVANVTVL 61
           DL  ++  +   +S LK ++  LRTG R+ P  ++ ++V+ + G+     L  +A V   
Sbjct: 68  DLSQLELGIATAVSRLKDELTKLRTGGRLCPETIESLRVQLSKGTKETARLGDLAQVVPK 127

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVA 118
             RM+ V V ++  +  +   I  SNL L P  +      L IP+P  T+E R   V  A
Sbjct: 128 GGRMVAVLVSEESYMKPISSAILASNLSLTPQQDPHNALQLNIPIPPPTKESRDQTVLAA 187

Query: 119 HAYAEKSKISVRNIRRDGMDH--LKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
            A  E++  +VR  R  G+ H  L++  K   A  D     ++ ++K+T+   K +   F
Sbjct: 188 KAAMERAASNVRETR--GIVHKRLQEMIKKKIARPDDARKAQDKMEKLTEKGQKEVKDLF 245

Query: 177 EEKKKEI 183
           E  KK +
Sbjct: 246 EVAKKAM 252


>gi|255718059|ref|XP_002555310.1| KLTH0G06270p [Lachancea thermotolerans]
 gi|238936694|emb|CAR24873.1| KLTH0G06270p [Lachancea thermotolerans]
          Length = 239

 Score = 45.4 bits (106), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K +   T+   KK +  +R G  SPS+ D + V    S      VA  ++     L+V+V
Sbjct: 63  KTQFSVTLDLHKKKLSEIRAGSASPSIFDKLSVGKENSK--FTDVATTSMKGKNSLIVTV 120

Query: 71  WDKEMVASVERGIHESNLGLNP---IVEGQVLRIPV-PETTEERRLALVKVAHAYAE--- 123
           +D +   SV   I  + L LNP       Q L+I + P TTE R+    ++   + E   
Sbjct: 121 FDPKDTKSVVSSILAAGLNLNPEKIPNNDQQLKISLPPPTTETRKQTCKQLKEVFEEFKN 180

Query: 124 -KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLE 158
             +K S+ +IR D +  LK   K   + + ++  L+
Sbjct: 181 SANKNSLGHIRGDILKQLKNIDKKNDSVKKVIQDLD 216


>gi|121719597|ref|XP_001276497.1| ribosome recycling factor, putative [Aspergillus clavatus NRRL 1]
 gi|119404709|gb|EAW15071.1| ribosome recycling factor, putative [Aspergillus clavatus NRRL 1]
          Length = 251

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 7/185 (3%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLR-TGRVSPSMLDLVKVE-AYGSH--VPLNQVANVTVL 61
           DL +++  +   +S L+ D+  LR  GR +   L+ ++V  + GS   + L  +A V   
Sbjct: 64  DLSSLQAGISTVVSRLRDDLSKLRIGGRFNTESLENLRVCLSKGSKDTLRLGDLAQVVPK 123

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVA 118
             R + +   ++E +  V   I  SNL L P  +      L I +P  T+E R   V +A
Sbjct: 124 GGRTVTILASEEEHIKPVTSAIVSSNLSLTPQPDAHNALQLNILIPPPTKELRDQTVAIA 183

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A  +K+  ++R  R      L+  +K   A  D V   ++ ++K+T+   K +   F+ 
Sbjct: 184 KAAMDKAAGAIRESRSVAHKRLQDMQKKKIARPDDVRKAQDQMEKLTERGQKEVKELFDT 243

Query: 179 KKKEI 183
            +K +
Sbjct: 244 TRKAL 248


>gi|82593721|ref|XP_725122.1| ribosome releasing factor [Plasmodium yoelii yoelii str. 17XNL]
 gi|23480010|gb|EAA16687.1| ribosome releasing factor-related [Plasmodium yoelii yoelii]
          Length = 413

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 76/167 (45%), Gaps = 3/167 (1%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M      +KK+        VS +M +  +V+       +N + ++   E  + +++ +
Sbjct: 248 EKMNKIYDHIKKESYRFNLNNVSSAMFESERVKINEQIYTINHICHIKKKE-NLFIITPY 306

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D   V  +     +    L   ++ + + + +P  +E  +  +        E+SKI++RN
Sbjct: 307 DPYFVNFIYIHFTKEYNELKFYIKDKSVYVVIPPLSEHLKNEIKNKIKDKIEESKITLRN 366

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           +R+  M+ L+K +      +D+    +N IQ + D T KNI+  F E
Sbjct: 367 VRKKFMNKLEKIK--NYIGKDIYFKQKNHIQSLHDQTKKNIEKIFNE 411


>gi|325117497|emb|CBZ53049.1| conserved hypothetical protein [Neospora caninum Liverpool]
          Length = 344

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 69/119 (57%), Gaps = 9/119 (7%)

Query: 74  EMVASVERGIHESNLGLNPIVEGQ---------VLRIPVPETTEERRLALVKVAHAYAEK 124
           ++ A++E+ +  ++LGL+   + +          + +  P  T+ERRL LV  A A AE+
Sbjct: 223 QLFAAIEKALSTASLGLSVRTKNEDEKGAKRQREMLVDFPALTQERRLQLVNEARAEAEE 282

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            ++ +R +RR+ ++ L+  +K+G   ED ++ L++ +Q+ T+  I  ID+    K+K++
Sbjct: 283 GRVVLRRLRRELLEELRGVKKAGGIGEDRISKLQDRVQQATEKKIAEIDTTLSSKEKQL 341


>gi|327352864|gb|EGE81721.1| ribosome recycling factor [Ajellomyces dermatitidis ATCC 18188]
          Length = 304

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 11/140 (7%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLNQVA 56
                +++ +   +  LK D+  LR G R +P  ++ ++V     +  GS   V L ++A
Sbjct: 113 FGFSQLENDIAGAVQRLKDDISKLRAGGRFNPEAIETLRVAVSKGDGKGSKETVKLGELA 172

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLA 113
            V     RML + V ++E +  +   +  S+L LNP  +      L +P+P  T+E R  
Sbjct: 173 QVIPKGGRMLTILVGEEEYIKPITSSLLSSSLSLNPQPDPHNSLQLNVPIPPPTKESRDQ 232

Query: 114 LVKVAHAYAEKSKISVRNIR 133
            VK A A  +K+  +VRN R
Sbjct: 233 SVKDAKAAMDKASTAVRNAR 252


>gi|167463764|ref|ZP_02328853.1| ribosome recycling factor [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 62

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+++RNIRRD  + +KK  K+ + SED     ++DIQK TD  I  +D     K+KEIM
Sbjct: 2   AKVAIRNIRRDSNESIKKMEKT-EISEDESRRHQDDIQKSTDKYIAEVDKVLAAKEKEIM 60


>gi|296421645|ref|XP_002840375.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636590|emb|CAZ84566.1| unnamed protein product [Tuber melanosporum]
          Length = 258

 Score = 43.9 bits (102), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 11/137 (8%)

Query: 18  ISFLKKDMMTLRTG-RVSPSMLDLVKV---EAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           I  L+ D+  LR G R  P+ L+ ++V    + G+   L  +A+V + + R  VVSV+D 
Sbjct: 87  IDKLRTDIAKLRAGGRNDPATLENIQVVLDRSTGASASLRDIAHV-LPKGRSFVVSVYDA 145

Query: 74  EMVASVERGIHESNLGLNPIVEG---QVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
             V  V   I +++L + P+ +    Q++ +P+P  T+E R  + ++     E+    +R
Sbjct: 146 ANVKYVIAAIQKADLNVQPMPDPKNTQLINVPLPPPTKETRSEIARMVGKAGERVMNYLR 205

Query: 131 NIRRDG---MDHLKKSR 144
             R+D    +  LKK R
Sbjct: 206 LARQDSHKLIKGLKKER 222


>gi|205373431|ref|ZP_03226235.1| hypothetical protein Bcoam_09080 [Bacillus coahuilensis m4-4]
          Length = 62

 Score = 43.9 bits (102), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)

Query: 2  NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQ 54
          N VI+    K+RM   I+   +++ ++R GR + S+LD + VE YG+  P+NQ
Sbjct: 3  NSVINTG--KERMDKAIAAYSRELASIRAGRANASLLDGLSVEYYGAPTPINQ 53


>gi|68072191|ref|XP_678009.1| ribosome releasing factor [Plasmodium berghei strain ANKA]
 gi|56498332|emb|CAI00267.1| ribosome releasing factor, putative [Plasmodium berghei]
          Length = 178

 Score = 43.5 bits (101), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 3/167 (1%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M      +KK+        VS +M +  KV+       +N + ++   E  + +++ +
Sbjct: 13  EKMNKVYEHIKKESYRFNLNNVSSAMFENEKVKINERIYTINHICHIKKKE-NLFIITPY 71

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D   V  +     +    L   ++ + +   +P  +E  +  +        E+SKI++RN
Sbjct: 72  DPYFVNFIYLHFTKEYSELKFYIKDKSICAVIPPLSEHLKNEIKNKIKDKIEESKITLRN 131

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           +R+  M+ L+K +      +D+    +N IQ + D T K I+  F E
Sbjct: 132 VRKKFMNKLEKIK--NYIGKDIYFKQKNHIQSLHDQTKKKIEKIFNE 176


>gi|50287853|ref|XP_446356.1| hypothetical protein [Candida glabrata CBS 138]
 gi|60390409|sp|Q6FTT8|RRF1_CANGA RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|49525663|emb|CAG59280.1| unnamed protein product [Candida glabrata]
          Length = 233

 Score = 43.1 bits (100), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 11/166 (6%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N  I +  +  +   ++    K++   R G V+ ++ D + ++   +     ++A+ T+
Sbjct: 47  VNPSIYVDELVSKFDKSLELYSKELTDKRKGSVNANIFDNLSLK---NGALFKEMASTTL 103

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNP---IVEGQVLRIPVPETTEERRLALVKV 117
                L+V+V+D   V ++   I  S   LNP       Q L+IP+P  T E R  L K 
Sbjct: 104 KGKGSLLVTVFDPNEVKNIVSAILASGQNLNPERVPTNNQQLKIPLPPPTAESRQNLCKE 163

Query: 118 AHAYAEK-----SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLE 158
                EK     SK S+ +IR + M  LK  +K  ++ + ++ ++E
Sbjct: 164 LKTVFEKYKQSPSKNSLGHIRNEVMKKLKSLQKKDESVKKIIQNVE 209


>gi|268560952|ref|XP_002646329.1| Hypothetical protein CBG12038 [Caenorhabditis briggsae]
 gi|187029873|emb|CAP31083.1| hypothetical protein CBG_12038 [Caenorhabditis briggsae AF16]
          Length = 198

 Score = 42.7 bits (99), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 47  GSHVPLNQVANVTVLEPRMLVVSVWDK-EMVASVERGIHESNLGLNPIVEGQVLRIPVPE 105
           G   PL+ VA VT+  P +++++  D    + + +  I +S L + P  EG VL + VP 
Sbjct: 58  GKEKPLSLVARVTLKSPLIVMLNFQDNPSAIKAAKLAIQKSTLNVTPQQEGAVLYVNVPP 117

Query: 106 TTEERR 111
           T++ERR
Sbjct: 118 TSKERR 123


>gi|213407242|ref|XP_002174392.1| mitochondrial translation termination factor [Schizosaccharomyces
           japonicus yFS275]
 gi|212002439|gb|EEB08099.1| mitochondrial translation termination factor [Schizosaccharomyces
           japonicus yFS275]
          Length = 241

 Score = 42.4 bits (98), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 5/157 (3%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ I +++  T+  +  D       ++   M+   K E    H+ L  +A ++ +  ++L
Sbjct: 59  LQGIPEKLTSTLKVMATDSQQGNVNQLEHVMVSKPKQE---EHL-LKDIAAISRVSGKVL 114

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQV-LRIPVPETTEERRLALVKVAHAYAEKS 125
            +  +  + V  + + I  SNL + P+++  V +++ + ETT E   AL K      +++
Sbjct: 115 NIKPYSPQDVKYIMKAITSSNLRMQPVLKDSVTIQVRLQETTLETLKALAKQIKEQEDRT 174

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
           K+++R +R      L + + S   SED    +E D+Q
Sbjct: 175 KVAIRLVRTSFQKKLARRKLSKVWSEDECRKVEKDMQ 211


>gi|296806365|ref|XP_002843992.1| ribosomal recycling factor [Arthroderma otae CBS 113480]
 gi|238845294|gb|EEQ34956.1| ribosomal recycling factor [Arthroderma otae CBS 113480]
          Length = 250

 Score = 42.4 bits (98), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 21/147 (14%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGSH-------------- 49
            D   + D + D ++ LK+D+  LR G RV+P  ++ ++V  +                 
Sbjct: 98  FDFAPLHDSIKDAVTRLKEDLAKLRGGGRVTPEAIENIRVSLHKVGGSDGGKGKKAASSG 157

Query: 50  ---VPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPV 103
              V L +VA+V     R + + V ++  V +V   I  S+L LNP  +      L + +
Sbjct: 158 KETVRLGEVASVIPKGGRTVSILVGEEHDVKAVMSAITASDLSLNPQGDPHNPLQLNVAI 217

Query: 104 PETTEERRLALVKVAHAYAEKSKISVR 130
           P  T+E R   VK A A  EK+  + R
Sbjct: 218 PPPTKESREQTVKDAKAAMEKASNATR 244


>gi|212541408|ref|XP_002150859.1| ribosome recycling factor, putative [Penicillium marneffei ATCC
           18224]
 gi|210068158|gb|EEA22250.1| ribosome recycling factor, putative [Penicillium marneffei ATCC
           18224]
          Length = 293

 Score = 42.4 bits (98), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 93/186 (50%), Gaps = 9/186 (4%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG---RVSPSMLDLVKVE-AYGSH--VPLNQVANV 58
            D   ++  + D ++  K+D+  LR+G   R++P +++ ++V    GS+  V L++VA V
Sbjct: 103 FDFSQLQTGISDALTRFKEDLQKLRSGGGGRLNPEVIEQLRVHIVKGSNETVRLSEVAQV 162

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALV 115
                R + + + +++++  V   I  S+L L P  +      L +P+P  T+E R   V
Sbjct: 163 VPKGGRAVAIIIGEEDLIKPVNSAIISSSLSLTPQPDAHNPLQLNVPIPPPTKESRDQAV 222

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           K A    +K+  +VR+ R      L+  +K  +A  D +    + ++K+ +   K++   
Sbjct: 223 KAAKGAMDKAASAVRSARAAIHKKLQDMQKRKEARPDDIRKAHDQMEKLVEKAQKDVKDT 282

Query: 176 FEEKKK 181
           FE  +K
Sbjct: 283 FESARK 288


>gi|295659841|ref|XP_002790478.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226281655|gb|EEH37221.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 303

 Score = 42.0 bits (97), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 11/131 (8%)

Query: 14  MGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLNQVANVTVLEPRM 65
           + + +  LK D+  LR G R +P  ++ ++V     +  GS   V L ++A V     RM
Sbjct: 121 IAEAVRKLKDDISKLRAGGRFNPGTIESLRVAVTKGDGKGSKETVRLGELAQVIPKGGRM 180

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVAHAYA 122
           L + V + E V  +   +  S+L LNP  +      L +P+P  T+E R   VK A A  
Sbjct: 181 LTLLVGEDEYVKPIASALLSSDLSLNPQRDAHNSLQLNVPIPPPTKESREQSVKDAKAAM 240

Query: 123 EKSKISVRNIR 133
           E++  +VRN R
Sbjct: 241 ERASNAVRNAR 251


>gi|50543588|ref|XP_499960.1| YALI0A10813p [Yarrowia lipolytica]
 gi|60390378|sp|Q6CHA2|RRF1_YARLI RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|49645825|emb|CAG83889.1| YALI0A10813p [Yarrowia lipolytica]
          Length = 264

 Score = 42.0 bits (97), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 4/112 (3%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHV-PLNQVANVTVLE 62
           +I+    +D    +++        ++ G  SP +++ ++V+     V  +  +A+V +  
Sbjct: 72  MIEWNKFEDLSAKSVAAFAAKAKEIKAGNNSPDLINNIEVKISKDEVYQIKDIASVALKG 131

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG---QVLRIPVPETTEERR 111
            R L +SV+D      V   I  S+L +NP  +    Q+L IP+P  + E R
Sbjct: 132 GRTLSISVYDPSHTKQVTASILASDLNMNPQPQANSPQILNIPLPPPSAESR 183


>gi|207111159|ref|ZP_03245321.1| ribosome recycling factor [Helicobacter pylori HPKX_438_CA4C1]
          Length = 63

 Score = 41.6 bits (96), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 104 PETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASED 152
           P TTE+R+L + K A A  EK+K++VRN R+D  + +KK  K  + SED
Sbjct: 7   PMTTEQRKL-IAKDAKAMGEKAKVAVRNTRQDANNKVKKLEKDKEISED 54


>gi|149239126|ref|XP_001525439.1| hypothetical protein LELG_03367 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450932|gb|EDK45188.1| hypothetical protein LELG_03367 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 271

 Score = 41.2 bits (95), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 8/134 (5%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLD----LVKVEAYGSHVPLNQVANVT 59
            ID ++ ++R    +   +K    ++ GR++P + D     VK       VP   VA +T
Sbjct: 79  TIDFKDAEERFQHVLEKFEKAANEIKLGRLNPRVFDNLMVAVKDGNKSEEVPFTSVA-LT 137

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQV---LRIPVPETTEERRLALVK 116
            ++ R  +V+++D    A++   I  S L ++   +      LRIP+P  T+E +   +K
Sbjct: 138 SMKGRNFIVTMFDPLQSAAIINAIIGSGLNMSGTTDPNNKFNLRIPMPPVTQETKQNDLK 197

Query: 117 VAHAYAEKSKISVR 130
                 EK+K   R
Sbjct: 198 QLKELYEKTKNGAR 211


>gi|307568248|pdb|3LHP|S Chain S, Crystal Structure Of Hiv Epitope-Scaffold
           4e10_d0_1isea_004_n 4e10 Fv Complex
 gi|307568249|pdb|3LHP|T Chain T, Crystal Structure Of Hiv Epitope-Scaffold
           4e10_d0_1isea_004_n 4e10 Fv Complex
          Length = 123

 Score = 40.8 bits (94), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 8/72 (11%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASE----DMVASLENDIQ 162
           TEER    +K+    AE+++++VRN+ RD  D   K+   GK  E    D+  SL  D+Q
Sbjct: 44  TEERIKDWLKIVRGEAEQARVAVRNVGRDAND---KAAALGKDKEINWFDISQSLW-DVQ 99

Query: 163 KITDSTIKNIDS 174
           K+TD+ IK I++
Sbjct: 100 KLTDAAIKKIEA 111


>gi|256270599|gb|EEU05773.1| Rrf1p [Saccharomyces cerevisiae JAY291]
          Length = 230

 Score = 40.8 bits (94), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +   T+   K+ M  ++ G  +P + + +    + ++     +A  ++     L
Sbjct: 52  LKKAETQFKKTLEVQKQKMNEIKQGNFNPKVFNSL---VFKNNRKFTDIATTSLKGKNAL 108

Query: 67  VVSVWDKEMVASVERGIHESNLGLNP--IVEGQV-LRIPVPETTEERRLALVK----VAH 119
           +++V+D + V +V  G+  +NL L P  +    + L++ +P  T E RL + K    V  
Sbjct: 109 LITVFDPKDVKTVISGVLAANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFE 168

Query: 120 AYAEKS-KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            Y + S K S+  IR   +   K  +K     +D V   E D++K+    +  +   F++
Sbjct: 169 EYKQSSLKDSLGTIRGSILKEFKSFKK-----DDAVRKAERDLEKLHKDYVNKLHDQFQK 223

Query: 179 KKKEIM 184
            +K I+
Sbjct: 224 VEKSIL 229


>gi|6321827|ref|NP_011903.1| Rrf1p [Saccharomyces cerevisiae S288c]
 gi|731650|sp|P38771|RRF1_YEAST RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|488171|gb|AAB68906.1| Yhr038wp [Saccharomyces cerevisiae]
 gi|3327238|dbj|BAA31687.1| FIL1 [Saccharomyces cerevisiae]
 gi|285809942|tpg|DAA06729.1| TPA: Rrf1p [Saccharomyces cerevisiae S288c]
          Length = 230

 Score = 40.8 bits (94), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +   T+   K+ M  ++ G  +P + + +    + ++     +A  ++     L
Sbjct: 52  LKKAETQFKKTLEIQKQKMNEIKQGNFNPKVFNSL---VFKNNRKFTDIATTSLKGKNAL 108

Query: 67  VVSVWDKEMVASVERGIHESNLGLNP--IVEGQV-LRIPVPETTEERRLALVK----VAH 119
           +++V+D + V +V  G+  +NL L P  +    + L++ +P  T E RL + K    V  
Sbjct: 109 LITVFDPKDVKTVISGVLAANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFE 168

Query: 120 AYAEKS-KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            Y + S K S+  IR   +   K  +K     +D V   E D++K+    +  +   F++
Sbjct: 169 EYKQSSLKDSLGTIRGSILKEFKSFKK-----DDAVRKAERDLEKLHKDYVNKLHDQFQK 223

Query: 179 KKKEIM 184
            +K I+
Sbjct: 224 VEKSIV 229


>gi|323304735|gb|EGA58496.1| Rrf1p [Saccharomyces cerevisiae FostersB]
          Length = 182

 Score = 40.8 bits (94), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +   T+   K+ M  ++ G  +P + + +    + ++     +A  ++     L
Sbjct: 4   LKKAETQFKKTLEVQKQKMNEIKQGNFNPKVFNSL---VFKNNRKFTDIATTSLKGKNAL 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNP--IVEGQV-LRIPVPETTEERRLALVK----VAH 119
           +++V+D + V +V  G+  +NL L P  +    + L++ +P  T E RL + K    V  
Sbjct: 61  LITVFDPKDVKTVISGVLAANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFE 120

Query: 120 AYAEKS-KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            Y + S K S+  IR   +   K  +K     +D V   E D++K+    +  +   F++
Sbjct: 121 EYKQSSLKDSLGTIRGSILKEFKSFKK-----DDAVRKAERDLEKLHKDYVNKLHDQFQK 175

Query: 179 KKKEIM 184
            +K I+
Sbjct: 176 VEKSIV 181


>gi|23335168|ref|ZP_00120406.1| COG0233: Ribosome recycling factor [Bifidobacterium longum DJO10A]
          Length = 58

 Score = 40.4 bits (93), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%)

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRR   + + K+ K G+  ED    L  D+ K+T S    ID+  E K+KEIM 
Sbjct: 1   MRNIRRKTKETIDKAVKDGEMGEDEGDRLLKDLDKVTKSVTDEIDTLLETKQKEIME 57


>gi|151943982|gb|EDN62275.1| mitochondrial ribosome recycling factor [Saccharomyces cerevisiae
           YJM789]
 gi|190405822|gb|EDV09089.1| mitochondrial ribosome recycling factor [Saccharomyces cerevisiae
           RM11-1a]
          Length = 230

 Score = 40.4 bits (93), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +   T+   K+ M  ++ G  +P + + +    + ++     +A  ++     L
Sbjct: 52  LKKAETQFKKTLEVQKQKMNEIKQGNFNPKVFNSL---VFKNNRKFTDIATTSLKGKNAL 108

Query: 67  VVSVWDKEMVASVERGIHESNLGLNP--IVEGQV-LRIPVPETTEERRLALVK----VAH 119
           +++V+D + V +V  G+  +NL L P  +    + L++ +P  T E RL + K    V  
Sbjct: 109 LITVFDPKDVKTVISGVLAANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFE 168

Query: 120 AYAEKS-KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            Y + S K S+  IR   +   K  +K     +D V   E D++K+    +  +   F++
Sbjct: 169 EYKQSSLKDSLGTIRGSILKEFKSFKK-----DDAVRKAERDLEKLHKDYVNKLHDQFQK 223

Query: 179 KKKEIM 184
            +K I+
Sbjct: 224 VEKSIV 229


>gi|207344733|gb|EDZ71776.1| YHR038Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259147070|emb|CAY80324.1| Rrf1p [Saccharomyces cerevisiae EC1118]
          Length = 231

 Score = 40.4 bits (93), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +   T+   K+ M  ++ G  +P + + +    + ++     +A  ++     L
Sbjct: 53  LKKAETQFKKTLEVQKQKMNEIKQGNFNPKVFNSL---VFKNNRKFTDIATTSLKGKNAL 109

Query: 67  VVSVWDKEMVASVERGIHESNLGLNP--IVEGQV-LRIPVPETTEERRLALVK----VAH 119
           +++V+D + V +V  G+  +NL L P  +    + L++ +P  T E RL + K    V  
Sbjct: 110 LITVFDPKDVKTVISGVLAANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFE 169

Query: 120 AYAEKS-KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            Y + S K S+  IR   +   K  +K     +D V   E D++K+    +  +   F++
Sbjct: 170 EYKQSSLKDSLGTIRGSILKEFKSFKK-----DDAVRKAERDLEKLHKDYVNKLHDQFQK 224

Query: 179 KKKEIM 184
            +K I+
Sbjct: 225 VEKSIV 230


>gi|27461183|gb|AAL79355.1| ribosome recycling factor [Phytoplasma sp. DIV]
          Length = 94

 Score = 40.0 bits (92), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 44/83 (53%)

Query: 7  LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
          L +++ +M      + K+   +RTG  +P++LD + V  YG+   L  +A+++V E   L
Sbjct: 9  LASLETKMTQAQEVMLKNFCDIRTGTANPNILDKITVNYYGAPXFLKTLASISVSEGNQL 68

Query: 67 VVSVWDKEMVASVERGIHESNLG 89
           +  +D  ++ ++++      LG
Sbjct: 69 NIKPYDSXLIPNIKKVGXAPKLG 91


>gi|225679501|gb|EEH17785.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 303

 Score = 39.7 bits (91), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 11/131 (8%)

Query: 14  MGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLNQVANVTVLEPRM 65
           + + +  LK D+  LR G RV+P  ++ ++V     +  GS   V L ++  V     RM
Sbjct: 121 IAEAVRKLKDDISKLRAGGRVNPETIESLRVAVTKGDGKGSKETVRLGELVQVIPKGGRM 180

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVAHAYA 122
           L + V + E V  +   +  SNL LNP  +      L +P+P  T+E R   VK A A  
Sbjct: 181 LTLLVGEDEYVKPITSALLSSNLSLNPQTDAHNSLQLNVPIPPPTKESREQSVKEAKAAM 240

Query: 123 EKSKISVRNIR 133
           E++  +VRN R
Sbjct: 241 ERASNAVRNAR 251


>gi|226291233|gb|EEH46661.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 303

 Score = 39.7 bits (91), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 11/131 (8%)

Query: 14  MGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLNQVANVTVLEPRM 65
           + + +  LK D+  LR G RV+P  ++ ++V     +  GS   V L ++  V     RM
Sbjct: 121 IAEAVRKLKDDISKLRAGGRVNPETIESLRVAVTKGDGKGSKETVRLGELVQVIPKGGRM 180

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVAHAYA 122
           L + V + E V  +   +  SNL LNP  +      L +P+P  T+E R   VK A A  
Sbjct: 181 LTLLVGEDEYVKPITSALLSSNLSLNPQTDAHNSLQLNVPIPPPTKESREQSVKDAKAAM 240

Query: 123 EKSKISVRNIR 133
           E++  +VRN R
Sbjct: 241 ERASNAVRNAR 251


>gi|218672183|ref|ZP_03521852.1| ribosome recycling factor [Rhizobium etli GR56]
          Length = 41

 Score = 39.3 bits (90), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 28/41 (68%)

Query: 1  MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLV 41
          M++ ID++ +K RM   +S  K D+ +LRTGR S ++LD V
Sbjct: 1  MSEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPV 41


>gi|316969816|gb|EFV53856.1| putative ribosome recycling factor [Trichinella spiralis]
          Length = 267

 Score = 39.3 bits (90), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 3/137 (2%)

Query: 50  VPLNQVANVTVLEPRMLVVSVWDK-EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTE 108
           VPLN +A VT+  P + ++++    + V +V + I ES L +    +   L +P+P  ++
Sbjct: 130 VPLNHIAQVTLKNPHLAIINLSSTPQAVKAVMKAIAESGLDVGVQQQNAFLYVPLPRPSK 189

Query: 109 ERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST 168
            +R  L K A     +    +R I R     +K  +K     +++  SL   ++ +    
Sbjct: 190 AKREQLAKNAKILYNRCHDQLREIMR--YHEVKLRKKEHSLQKEIYNSLIFHLEDLVRIY 247

Query: 169 IKNIDSFFEEKKKEIMH 185
            +  +   + K++E+M 
Sbjct: 248 AQKAEKLMKAKQEELMQ 264


>gi|323348363|gb|EGA82611.1| Rrf1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 161

 Score = 38.9 bits (89), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 16/168 (9%)

Query: 25  MMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIH 84
           M  ++ G  +P + + +    + ++     +A  ++     L+++V+D + V +V  G+ 
Sbjct: 1   MNEIKQGNFNPKVFNXL---VFKNNRKFTDIATTSLKGKNALLITVFDPKDVKTVISGVL 57

Query: 85  ESNLGLNP--IVEGQV-LRIPVPETTEERRLALVK----VAHAYAEKS-KISVRNIRRDG 136
            +NL L P  +    + L++ +P  T E RL + K    V   Y + S K S+  IR   
Sbjct: 58  AANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFEEYKQSSLKDSLGTIRGSI 117

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +   K  +K     +D V   E D++K+    +  +   F++ +K I+
Sbjct: 118 LKEFKSFKK-----DDAVRKAERDLEKLHKDYVNKLHDQFQKVEKSIV 160


>gi|156844975|ref|XP_001645548.1| hypothetical protein Kpol_1004p67 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116212|gb|EDO17690.1| hypothetical protein Kpol_1004p67 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 238

 Score = 38.9 bits (89), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 17/178 (9%)

Query: 16  DTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEM 75
           +++    K +  ++ GR +P + D +K+    S      VA+ ++     L+++V+D + 
Sbjct: 68  ESLELHNKKLNEIKQGRANPKIFDGLKLHNGAS---FKDVAHTSLRGKNSLLITVYDPKD 124

Query: 76  VASVERGIHESNLGLNPIVE---GQVLRIPVPE-TTEERRLALVK----VAHAYAEKS-K 126
             +V   I  + L LNP  +    Q+L++ +P  TTE  R+ LVK    V  ++   S +
Sbjct: 125 AKNVISAIMGAGLNLNPEKDPNNSQLLKVLLPPPTTES-RMNLVKELKIVFESFKSSSMR 183

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            S+ ++R D +  +KK  K     +D V     D++K+     K +    ++ +K +M
Sbjct: 184 NSLASVRADILKEMKKLDK----KDDSVRKAMQDLEKLHKDYAKKLQDQLKQAEKTLM 237


>gi|145253418|ref|XP_001398222.1| ribosome recycling factor [Aspergillus niger CBS 513.88]
 gi|134083787|emb|CAK47121.1| unnamed protein product [Aspergillus niger]
          Length = 273

 Score = 38.9 bits (89), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 7/185 (3%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGSH---VPLNQVANVTVL 61
           D   + D +   +S L+ ++  +R G R +   ++ ++V+   S    + L  +A V   
Sbjct: 86  DFSQLHDGIAAALSRLRDELSKMRVGGRFNTVSIESLRVQLSKSSKQSIKLGDLAQVVPK 145

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVA 118
             RM+ +   D++ V  +   I  SNL L P  +      L + +P  T+E R   + +A
Sbjct: 146 GGRMVTILASDEDHVKPIRSSIVSSNLSLTPQADPHNSLQLNVTIPPPTKESRDQTIAMA 205

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A  EK+  +VR+ R      L+  +K   A  D V   +  ++K+ +   K +   FE 
Sbjct: 206 KAAMEKAAGAVRDSRSAVHKRLQDLQKKKIARPDDVRKAQEQMEKLAEKGQKEVKELFET 265

Query: 179 KKKEI 183
            +K +
Sbjct: 266 TRKAM 270


>gi|323308800|gb|EGA62037.1| Rrf1p [Saccharomyces cerevisiae FostersO]
 gi|323337268|gb|EGA78521.1| Rrf1p [Saccharomyces cerevisiae Vin13]
 gi|323354795|gb|EGA86629.1| Rrf1p [Saccharomyces cerevisiae VL3]
          Length = 161

 Score = 38.5 bits (88), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 16/168 (9%)

Query: 25  MMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIH 84
           M  ++ G  +P + + +    + ++     +A  ++     L+++V+D + V +V  G+ 
Sbjct: 1   MNEIKQGNFNPKVFNSL---VFKNNRKFTDIATTSLKGKNALLITVFDPKDVKTVISGVL 57

Query: 85  ESNLGLNP--IVEGQV-LRIPVPETTEERRLALVK----VAHAYAEKS-KISVRNIRRDG 136
            +NL L P  +    + L++ +P  T E RL + K    V   Y + S K S+  IR   
Sbjct: 58  AANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFEEYKQSSLKDSLGTIRGSI 117

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +   K  +K     +D V   E D++K+    +  +   F++ +K I+
Sbjct: 118 LKEFKSFKK-----DDAVRKAERDLEKLHKDYVNKLHDQFQKVEKSIV 160


>gi|225558281|gb|EEH06565.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 302

 Score = 38.5 bits (88), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 11/143 (7%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLN 53
           N       +++ +   +  LK D+  LR G R +P  ++ ++V     +  G+   V L 
Sbjct: 110 NDPFGFTQLENDIAVAVQRLKDDISKLRAGGRFNPEAIESLRVAVMKGDGKGTKETVKLG 169

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEER 110
           ++A V     RML + V D+  +  +   +  SNL LNP  +      L +P+P  T+E 
Sbjct: 170 ELAQVIPKAGRMLTILVGDQAYIKPITSALLSSNLSLNPQSDPHNSLQLNVPIPPPTKES 229

Query: 111 RLALVKVAHAYAEKSKISVRNIR 133
           R   VK A A  +K+  +VRN R
Sbjct: 230 RDQSVKDAKAAMDKASNAVRNAR 252


>gi|239611883|gb|EEQ88870.1| ribosome recycling factor [Ajellomyces dermatitidis ER-3]
          Length = 277

 Score = 38.1 bits (87), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 32/137 (23%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLNQVA 56
                +++ +   +  LK D+  LR G R +P  ++ ++V     +  GS   V L ++A
Sbjct: 113 FGFSQLENDIAGAVQRLKDDISKLRAGGRFNPEAIETLRVAVSKGDGKGSKETVKLGELA 172

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVK 116
            V     RML + V ++E                        L +P+P  T+E R   VK
Sbjct: 173 QVIPKGGRMLTILVGEEE------------------------LNVPIPPPTKESRDQSVK 208

Query: 117 VAHAYAEKSKISVRNIR 133
            A A  +K+  +VRN R
Sbjct: 209 DAKAAMDKASTAVRNAR 225


>gi|261201714|ref|XP_002628071.1| ribosome recycling factor [Ajellomyces dermatitidis SLH14081]
 gi|239590168|gb|EEQ72749.1| ribosome recycling factor [Ajellomyces dermatitidis SLH14081]
          Length = 277

 Score = 38.1 bits (87), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 32/137 (23%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLNQVA 56
                +++ +   +  LK D+  LR G R +P  ++ ++V     +  GS   V L ++A
Sbjct: 113 FGFSQLENDIAGAVQRLKDDISKLRAGGRFNPEAIETLRVAVSKGDGKGSKETVKLGELA 172

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVK 116
            V     RML + V ++E                        L +P+P  T+E R   VK
Sbjct: 173 QVIPKGGRMLTILVGEEE------------------------LNVPIPPPTKESRDQSVK 208

Query: 117 VAHAYAEKSKISVRNIR 133
            A A  +K+  +VRN R
Sbjct: 209 DAKAAMDKASTAVRNAR 225


>gi|298481915|ref|ZP_07000104.1| ABC transporter [Bacteroides sp. D22]
 gi|298271779|gb|EFI13351.1| ABC transporter [Bacteroides sp. D22]
          Length = 578

 Score = 37.7 bits (86), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 7/58 (12%)

Query: 113 ALVKVAHAYAEKSKISVRN-IRRDGMDHLKKSRKSGKA---SEDMVASLENDIQKITD 166
           ALV   +A+ E   IS+RN +R+D ++H+ KSR +G+    S DM+  +E D++ +TD
Sbjct: 105 ALVSRLYAHTE---ISLRNRLRQDLLEHILKSRWNGRETFHSGDMLNRMEEDVRTVTD 159


>gi|50305425|ref|XP_452672.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|60390379|sp|Q6CTR7|RRF1_KLULA RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|49641805|emb|CAH01523.1| KLLA0C10593p [Kluyveromyces lactis]
          Length = 241

 Score = 37.4 bits (85), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 14/177 (7%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
           T+   K+ +   + G  SP++ + ++V   G      ++A  ++     L+V+V+D +  
Sbjct: 70  TLELHKRKLAEQKVGTASPTIFNDLRVGKEGQK--FTELAATSLKGRNALIVTVFDPKDT 127

Query: 77  ASVERGIHESNLGLNP---IVEGQVLRIPVPETTEERRLA----LVKVAHAYAEKS-KIS 128
            ++   I  + L LNP       Q L++ +P  T E R A    L KV   Y   + K S
Sbjct: 128 KNIVSAIMAAGLNLNPERIPNNDQQLKVSLPPITTETRQAVCKDLKKVFEDYKHSALKES 187

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           + ++R + M  LK  +K      D V  +  D++KI       +    ++ +K +M+
Sbjct: 188 LGHVRGEIMKELKHLQKKN----DDVKKVIQDVEKIHKEYTIKLQEQLKQAEKSVMN 240


>gi|29345483|ref|NP_808986.1| putative ABC transporter ATP-binding protein [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|29337375|gb|AAO75180.1| putative ABC transporter, ATP-binding protein [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 476

 Score = 37.4 bits (85), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 7/58 (12%)

Query: 113 ALVKVAHAYAEKSKISVRN-IRRDGMDHLKKSRKSGKA---SEDMVASLENDIQKITD 166
           ALV   +A+ E   IS+RN +R+D ++H+ KSR +G+    S DM+  +E D++ +TD
Sbjct: 82  ALVSRLYAHTE---ISLRNRLRQDLLEHILKSRWNGRETFHSGDMLNRMEEDVRTVTD 136


>gi|281200592|gb|EFA74810.1| hypothetical protein PPL_11843 [Polysphondylium pallidum PN500]
          Length = 206

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVE 44
           DL  +K     T+ FL++    +R GR  P +LDL+ VE
Sbjct: 159 DLNTMKSSCDATVDFLRRGFGNIRCGRTGPELLDLITVE 197


>gi|295088202|emb|CBK69725.1| ABC-type multidrug transport system, ATPase and permease components
           [Bacteroides xylanisolvens XB1A]
          Length = 211

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 7/58 (12%)

Query: 113 ALVKVAHAYAEKSKISVRN-IRRDGMDHLKKSRKSGKA---SEDMVASLENDIQKITD 166
           ALV   +A+ E   IS+RN +R+D ++H+ KSR +G+    S DM+  +E D++ +TD
Sbjct: 82  ALVSRLYAHTE---ISLRNRLRQDLLEHILKSRWNGRETFHSGDMLNRMEEDVRTVTD 136


>gi|325119994|emb|CBZ55547.1| putative ribosome recycling factor domain-containing protein
           [Neospora caninum Liverpool]
          Length = 380

 Score = 37.0 bits (84), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/185 (20%), Positives = 83/185 (44%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           +   ++ + ++ M   +  + +D+  L   R      + + V A G    L+ +A V V 
Sbjct: 195 SDAFNVASYEEEMKAALDKMVQDVSALLVHRERAEHFERIPVSAGGEKRRLSDLAQVVVR 254

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ-VLRIPVPETTEERRLALVKVAHA 120
               + V V+ +  ++ V   +  ++       EG   +R+ +P+ T E R  L   A  
Sbjct: 255 GASTVHVHVFSEANLSKVMSALRAADPKWTLQQEGATAIRLQLPKVTPEMREELKTKARV 314

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV-ASLENDIQKITDSTIKNIDSFFEEK 179
           +   +K SVRN+R+    HL K +   ++ +D+    L+  +  + ++ +   D  F EK
Sbjct: 315 FLVTAKSSVRNLRQAARSHLHKLQFKTRSIDDVKRRELDASLTSLMEAYVGKCDKVFNEK 374

Query: 180 KKEIM 184
            ++++
Sbjct: 375 MQQLL 379


>gi|221481837|gb|EEE20207.1| hypothetical protein TGGT1_098720 [Toxoplasma gondii GT1]
          Length = 270

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 98  VLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV-AS 156
            +R+ +P+ T E R  L   A  +   +K +VRN+R+ G  HL K +   ++ +D+    
Sbjct: 181 AVRLQLPKVTSEMREELKTKARVFLVTAKSAVRNMRQAGRSHLHKLQFKSRSIDDVKRRE 240

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEIM 184
           L+  +  + ++ +   D  F EK ++ +
Sbjct: 241 LDASLTTLMETYVAKCDKVFNEKMQQFL 268


>gi|237843331|ref|XP_002370963.1| ribosome recycling factor domain-containing protein [Toxoplasma
           gondii ME49]
 gi|211968627|gb|EEB03823.1| ribosome recycling factor domain-containing protein [Toxoplasma
           gondii ME49]
 gi|221502335|gb|EEE28068.1| ribosome recycling factor, putative [Toxoplasma gondii VEG]
          Length = 266

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 1/88 (1%)

Query: 98  VLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV-AS 156
            +R+ +P+ T E R  L   A  +   +K +VRN+R+ G  HL K +   ++ +D+    
Sbjct: 177 AVRLQLPKVTSEMREELKTKARVFLVTAKSAVRNMRQAGRSHLHKLQFKSRSIDDVKRRE 236

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEIM 184
           L+  +  + ++ +   D  F EK ++ +
Sbjct: 237 LDASLTTLMETYVAKCDKVFNEKMQQFL 264


>gi|169836592|ref|ZP_02869780.1| Ribosome Recycling Factor (RRF) [candidate division TM7
          single-cell isolate TM7a]
          Length = 38

 Score = 37.0 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/31 (45%), Positives = 21/31 (67%)

Query: 51 PLNQVANVTVLEPRMLVVSVWDKEMVASVER 81
          PLNQV  V+  E R+LV+  WDK ++  +E+
Sbjct: 3  PLNQVGTVSAPEARLLVIDPWDKSLIPVIEK 33


>gi|116334924|ref|YP_802419.1| hypothetical protein CRP_022 [Candidatus Carsonella ruddii PV]
 gi|116235205|dbj|BAF35053.1| hypothetical protein [Candidatus Carsonella ruddii PV]
          Length = 176

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/135 (13%), Positives = 65/135 (48%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N + ++ + ++  K+    +    ++  + + +K++   S++ L ++ ++  ++ +  
Sbjct: 1   MSNYQIKIKNYLNLFKEKAFFINIKNLNIEIFNNLKIKYNNSYINLRELCSIKNIDKKKF 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +    D++++  + +  +  N G N + +   + + VP  + E R+  +K+     E   
Sbjct: 61  LFIFNDQKILLYLIKSKYFENFGFNILKKKTTIELLVPNISREFRINFLKIIKQEYEYFI 120

Query: 127 ISVRNIRRDGMDHLK 141
             + ++R+  + H+K
Sbjct: 121 EILESLRKKELLHIK 135


>gi|298489816|ref|YP_003719993.1| small GTP-binding protein ['Nostoc azollae' 0708]
 gi|298231734|gb|ADI62870.1| small GTP-binding protein ['Nostoc azollae' 0708]
          Length = 676

 Score = 36.2 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALV 115
           ++V  V  G+ E + G+ P++E  +   P PETT ERRL  +
Sbjct: 248 DLVVPVFFGVAEQDFGVRPLLEALLREAPEPETTMERRLKTI 289


>gi|254586291|ref|XP_002498713.1| ZYRO0G16830p [Zygosaccharomyces rouxii]
 gi|238941607|emb|CAR29780.1| ZYRO0G16830p [Zygosaccharomyces rouxii]
          Length = 243

 Score = 36.2 bits (82), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 9/129 (6%)

Query: 16  DTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEM 75
           +T+   KK +   + G  +P + D +K++  GS    ++ A+ +      L+V+V+D + 
Sbjct: 72  NTLELHKKKLNEFKQGVANPRIFDELKLQN-GSK--FSEAASTSTKGKNALLVTVYDPKD 128

Query: 76  VASVERGIHESNLGLNP---IVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              V   I  + L LNP       Q L+I +P  T E R  + K      E+ K S    
Sbjct: 129 TKHVISTIMAAGLNLNPERVPNNDQQLKISLPPMTTETRTRMCKDLKKVFEEYKNSS--- 185

Query: 133 RRDGMDHLK 141
            +D + H++
Sbjct: 186 SKDSLGHVR 194


>gi|86740826|ref|YP_481226.1| hypothetical protein Francci3_2125 [Frankia sp. CcI3]
 gi|86567688|gb|ABD11497.1| conserved hypothetical protein [Frankia sp. CcI3]
          Length = 470

 Score = 35.8 bits (81), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 30/63 (47%)

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V + WD+       RG  E + G  PI+EG ++R+ V     ERR   V + H+ A+   
Sbjct: 270 VATCWDRAHPRLTRRGGWEHHTGQLPIIEGTLIRLVVDRLPGERRPKPVWLWHSTADAGS 329

Query: 127 ISV 129
             V
Sbjct: 330 ADV 332


>gi|312220443|emb|CBY00384.1| hypothetical protein [Leptosphaeria maculans]
          Length = 403

 Score = 35.8 bits (81), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 87/187 (46%), Gaps = 24/187 (12%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGS------HVPLNQ 54
           ++  D+  ++  +   I  L  D+  LR+G +++P +++ +KV+  G+       V L  
Sbjct: 90  DEAYDVSGLETEILKAIEKLTHDLSLLRSGGKMNPEVVEALKVQ-LGTVSEGKESVRLGD 148

Query: 55  VANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ----VLRIPVPETTEER 110
           +A V V   R+L +   ++  +  +   I  S   L P+         +++P+P  T E 
Sbjct: 149 IAQV-VPRGRVLNIVCGEEGHIKPISSAIASSPHSLTPLAPEPSNPLTIQVPLPPPTGES 207

Query: 111 RLALVKVAHAYAEKSKISVRNIRRDGMDHLKKS-----------RKSGKASEDMVASLEN 159
           R A V+ +   AE++   ++  R++    L+K            +K+ K  ED+V     
Sbjct: 208 RRAAVEASIKAAERADKWIQTARQEHNKKLRKFELNKEVLPDDLQKAKKRMEDVVKKGHT 267

Query: 160 DIQKITD 166
           ++++I+D
Sbjct: 268 EVKRISD 274


>gi|70944426|ref|XP_742145.1| ribosome releasing factor [Plasmodium chabaudi chabaudi]
 gi|56520960|emb|CAH88742.1| ribosome releasing factor, putative [Plasmodium chabaudi chabaudi]
          Length = 141

 Score = 35.4 bits (80), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 5/128 (3%)

Query: 52  LNQVANVTVLEPRMLVVSVWDKEMVASV-ERGIHESNLGLNPIVEGQVLRIPVPETTEER 110
           +N + ++   E  + +++ +D   V  + +  I E N  L   ++ + +   +P  +E  
Sbjct: 16  INHICHIKKKE-NLFIITPYDPYFVNFIYQHFIKEYN-ELKFYIKDKSVYAVIPPLSEHL 73

Query: 111 RLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
           +  +        E+SKI++RN+R+  M  L+K +      +D+    +N IQ + D T K
Sbjct: 74  KNEIKNKIKDKIEESKITLRNVRKKFMTKLEKIK--NYIGKDIYFKQKNHIQSLHDQTKK 131

Query: 171 NIDSFFEE 178
           +I+  F E
Sbjct: 132 SIEKIFNE 139


>gi|116075501|ref|ZP_01472761.1| hypothetical protein RS9916_28114 [Synechococcus sp. RS9916]
 gi|116067698|gb|EAU73452.1| hypothetical protein RS9916_28114 [Synechococcus sp. RS9916]
          Length = 166

 Score = 35.4 bits (80), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 9/121 (7%)

Query: 66  LVVSVWDKEMVASVERGIHESNLGLN--PIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           L+ +V + + ++ +E+G  +  +G+   P+  G      + ET+   +  L +   +Y +
Sbjct: 38  LLENVPEYQDLSDMEKGFMKMGVGIASLPLAGGLAYFCYLHETSTLEKSVLQRSWKSYVD 97

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
                ++ ++    D  +   KSGKASE ++  L N I     ST K ID+F  E     
Sbjct: 98  ---TFIKGMK----DQSRSETKSGKASEKILEILFNKIAAFPPSTCKEIDAFANEPPPNP 150

Query: 184 M 184
           M
Sbjct: 151 M 151


>gi|218190713|gb|EEC73140.1| hypothetical protein OsI_07164 [Oryza sativa Indica Group]
          Length = 467

 Score = 35.4 bits (80), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 111 RLALVKVAHAYAEKSK--ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST 168
           RL L +    Y E     IS   ++ +G    K+ R S   S D+ ASL+ND+Q I D  
Sbjct: 163 RLYLFEAQGWYQETDSRSISCIEMKAEGQASRKRKRGSNSCSSDLAASLDNDVQVIIDGK 222

Query: 169 IKN 171
            ++
Sbjct: 223 FEH 225


>gi|115446099|ref|NP_001046829.1| Os02g0469900 [Oryza sativa Japonica Group]
 gi|47497414|dbj|BAD19471.1| glutathione S-transferase GST16-like protein [Oryza sativa Japonica
           Group]
 gi|47497529|dbj|BAD19581.1| glutathione S-transferase GST16-like protein [Oryza sativa Japonica
           Group]
 gi|113536360|dbj|BAF08743.1| Os02g0469900 [Oryza sativa Japonica Group]
 gi|215686854|dbj|BAG89704.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222622836|gb|EEE56968.1| hypothetical protein OsJ_06686 [Oryza sativa Japonica Group]
 gi|323388905|gb|ADX60257.1| ARID transcription factor [Oryza sativa Japonica Group]
          Length = 467

 Score = 35.4 bits (80), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 111 RLALVKVAHAYAEKSK--ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST 168
           RL L +    Y E     IS   ++ +G    K+ R S   S D+ ASL+ND+Q I D  
Sbjct: 163 RLYLFEAQGWYQETDSRSISCIEMKAEGQASRKRKRGSNSCSSDLAASLDNDVQVIIDGK 222

Query: 169 IKN 171
            ++
Sbjct: 223 FEH 225


>gi|326797899|ref|YP_004315718.1| glycoside hydrolase family 2 sugar binding protein
           [Sphingobacterium sp. 21]
 gi|326548663|gb|ADZ77048.1| glycoside hydrolase family 2 sugar binding protein
           [Sphingobacterium sp. 21]
          Length = 917

 Score = 35.0 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 8/93 (8%)

Query: 53  NQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRL 112
           N V     L  R L++   DK  V ++ER IH +  G   I +     +P     E RR+
Sbjct: 553 NWVTGKESLPYRALLIPKTDKMPVETLERLIHLAENGATLIFQSLPKDVPGAHDLERRRM 612

Query: 113 ALVKVAHAYAE--------KSKISVRNIRRDGM 137
            L +V     +        K KI V+ I RDG+
Sbjct: 613 KLAQVLENIKKMSRQPKVGKGKILVKEILRDGL 645


>gi|186685147|ref|YP_001868343.1| elongation factor G [Nostoc punctiforme PCC 73102]
 gi|186467599|gb|ACC83400.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
          Length = 682

 Score = 35.0 bits (79), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRL 112
           ++V  V  G+ E + G+ P++E  +   P PETT ERRL
Sbjct: 248 DLVVPVFFGVAEQDYGVRPLLEALLREAPEPETTAERRL 286


>gi|119607928|gb|EAW87522.1| mitochondrial ribosome recycling factor, isoform CRA_c [Homo
           sapiens]
          Length = 186

 Score = 35.0 bits (79), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 36/67 (53%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 82  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 141

Query: 64  RMLVVSV 70
           ++++V++
Sbjct: 142 QLILVNM 148


>gi|300724823|ref|YP_003714148.1| exonuclease V subunit alpha [Xenorhabdus nematophila ATCC 19061]
 gi|297631365|emb|CBJ92060.1| exonuclease V, alpha chain with recC and recD: 5' and 3' nuclease,
           ATPase, recombinase, helicase [Xenorhabdus nematophila
           ATCC 19061]
          Length = 628

 Score = 34.7 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)

Query: 22  KKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVAN-VTVLEPRMLVVSVWDKEMVASVE 80
           + D   LR GR +P  LD++ ++   S V L  +A+ +  L PR  V+ + DK+ +ASVE
Sbjct: 261 QPDSQKLRYGRDNPLSLDILIIDE-ASMVDLPMMAHLIDALPPRAKVIFLGDKDQLASVE 319

Query: 81  RG 82
            G
Sbjct: 320 AG 321


>gi|262340876|ref|YP_003283731.1| putative outer membrane protein [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272213|gb|ACY40121.1| putative outer membrane protein [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 827

 Score = 34.3 bits (77), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 28/41 (68%)

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQK 163
           E  ++ V+ IR++   ++KK +   K S+D++ +++NDIQ+
Sbjct: 116 EIHEVQVKGIRKEQFSNIKKLKSGDKISDDLIQTIKNDIQE 156


>gi|55958150|emb|CAI14712.1| mitochondrial ribosome recycling factor [Homo sapiens]
          Length = 124

 Score = 34.3 bits (77), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 36/67 (53%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 38  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 97

Query: 64  RMLVVSV 70
           ++++V++
Sbjct: 98  QLILVNM 104


>gi|291240807|ref|XP_002740309.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 927

 Score = 34.3 bits (77), Expect = 7.6,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 98  VLRIPVPETTEERRLA---LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV 154
           +L +P     +ER++    +VK+   + EK  ++VR   R G  HL +S    + S+DM+
Sbjct: 661 LLSVPRRICADERQIKHMDMVKIIARFQEKDAVTVRIYTRMGELHLSRSIHHVELSDDMM 720

Query: 155 ASLEND-IQKITDSTIKNIDSFFEE 178
             +E D  Q I  S+I  +  F  +
Sbjct: 721 EIMERDNKQIIIRSSISLVRGFIHD 745


>gi|154299907|ref|XP_001550371.1| predicted protein [Botryotinia fuckeliana B05.10]
 gi|150857124|gb|EDN32316.1| predicted protein [Botryotinia fuckeliana B05.10]
          Length = 119

 Score = 34.3 bits (77), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 14/105 (13%)

Query: 83  IHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDH 139
           I  S L L P  + Q    L IP+P  T+E R A ++ A    E +   VRN R      
Sbjct: 13  IQSSTLSLQPTPDPQNPLALNIPIPPPTKESRDAALQAASKAGEIASNGVRNARGAMQKK 72

Query: 140 LKK-----------SRKSGKASEDMVASLENDIQKITDSTIKNID 173
           L+            S+K+ K  E +V     +++KI ++  K ++
Sbjct: 73  LRAMEVKKTVRPDDSKKAHKEMEKVVEKGNGEVKKIVEAARKGME 117


>gi|119607931|gb|EAW87525.1| mitochondrial ribosome recycling factor, isoform CRA_e [Homo
           sapiens]
 gi|119607932|gb|EAW87526.1| mitochondrial ribosome recycling factor, isoform CRA_e [Homo
           sapiens]
 gi|158257050|dbj|BAF84498.1| unnamed protein product [Homo sapiens]
 gi|158259041|dbj|BAF85479.1| unnamed protein product [Homo sapiens]
          Length = 168

 Score = 34.3 bits (77), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 36/67 (53%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 82  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 141

Query: 64  RMLVVSV 70
           ++++V++
Sbjct: 142 QLILVNM 148


>gi|55958146|emb|CAI14708.1| mitochondrial ribosome recycling factor [Homo sapiens]
 gi|221042068|dbj|BAH12711.1| unnamed protein product [Homo sapiens]
 gi|221045920|dbj|BAH14637.1| unnamed protein product [Homo sapiens]
          Length = 158

 Score = 34.3 bits (77), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 36/67 (53%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 82  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 141

Query: 64  RMLVVSV 70
           ++++V++
Sbjct: 142 QLILVNM 148


>gi|295397144|ref|ZP_06807251.1| phage integrase family site-specific recombinase [Aerococcus
           viridans ATCC 11563]
 gi|294974612|gb|EFG50332.1| phage integrase family site-specific recombinase [Aerococcus
           viridans ATCC 11563]
          Length = 855

 Score = 34.3 bits (77), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
           ++L + VPETT E   +L K  + Y E  K+ + +   +G   L++  K GK  E ++  
Sbjct: 139 RLLLVHVPETTSE---SLNKYINRYIEHIKL-LSDTSSNGSFRLREIAKIGKIVEGLL-- 192

Query: 157 LENDIQKITDSTI 169
           L+NDI KIT S I
Sbjct: 193 LQNDISKITSSEI 205


>gi|55958145|emb|CAI14707.1| mitochondrial ribosome recycling factor [Homo sapiens]
          Length = 153

 Score = 34.3 bits (77), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 36/67 (53%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 82  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 141

Query: 64  RMLVVSV 70
           ++++V++
Sbjct: 142 QLILVNM 148


>gi|326433736|gb|EGD79306.1| hypothetical protein PTSG_09722 [Salpingoeca sp. ATCC 50818]
          Length = 76

 Score = 33.9 bits (76), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 4/77 (5%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           T E +  L K+A    EK K   RNIR   +  LKKS     A++D    +E  IQ+  D
Sbjct: 2   TTEYKSKLQKLAKDILEKYKHQARNIRNKYVAQLKKS----DATKDDKRHIETYIQQCMD 57

Query: 167 STIKNIDSFFEEKKKEI 183
             ++ +D+ +E K K +
Sbjct: 58  GHLRTMDAAYEAKHKAL 74


>gi|119607930|gb|EAW87524.1| mitochondrial ribosome recycling factor, isoform CRA_d [Homo
           sapiens]
          Length = 273

 Score = 33.9 bits (76), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 36/67 (53%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 156 IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 215

Query: 64  RMLVVSV 70
           ++++V++
Sbjct: 216 QLILVNM 222


>gi|119607933|gb|EAW87527.1| mitochondrial ribosome recycling factor, isoform CRA_f [Homo
           sapiens]
          Length = 176

 Score = 33.9 bits (76), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 17/67 (25%), Positives = 36/67 (53%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++  P
Sbjct: 82  IINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSP 141

Query: 64  RMLVVSV 70
           ++++V++
Sbjct: 142 QLILVNM 148


>gi|322695925|gb|EFY87725.1| ribosomal recycling factor precursor, putative [Metarhizium acridum
           CQMa 102]
          Length = 290

 Score = 33.9 bits (76), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 15/180 (8%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMT-LRTGRVSPSMLDLVKV---EAYG--SHVPLNQVANV 58
           +D  ++   +    ++ K  + T L  GR +PS L  + +    A G  S  PL ++A V
Sbjct: 102 LDFSSLVASLAPQDTYYKSALQTILHGGRFNPSALGGLPIAVKSASGEASTFPLGELAQV 161

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESN-LGLNPIVEGQVLRIPVPETTEERRLALVK- 116
                R + + V D+E +  +   +  S      P          + +   ER+  LV+ 
Sbjct: 162 VPRTNRTISLLVNDREYIKPIMSAVQSSREFNQQPQRSDDNDLELLLKVELERKEELVRR 221

Query: 117 ---VAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
                HA+ +K    VR  R      LK  +K G    D+V   E ++QK+ D+ +K ID
Sbjct: 222 IRETTHAWRDK----VRQARTRHDKVLKGWQKDGTVLRDVVRRAERELQKLQDAKMKEID 277


Searching..................................................done


Results from round 2




>gi|296132870|ref|YP_003640117.1| ribosome recycling factor [Thermincola sp. JR]
 gi|296031448|gb|ADG82216.1| ribosome recycling factor [Thermincola potens JR]
          Length = 185

 Score =  256 bits (656), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   +DRM   +  L+KD+ TLRTGR +P++L+ ++V+ YG   P+NQ+A V+  EPR+L
Sbjct: 6   INEAEDRMRKAVEALRKDLATLRTGRATPALLEKIQVDYYGVPTPINQMAKVSAPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  +E+ I +S+LGL P  +G V+R+ +P+ T+ERR  LVK+    AE  +
Sbjct: 66  VIQPWDKSVLGEIEKAIMKSDLGLTPNNDGTVIRLNIPQLTQERRAELVKICKKKAEDGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D LK+  KSG  SED     + +IQK+TD  IK +D   E K++EIM  
Sbjct: 126 VAIRNIRRDANDQLKEFEKSGDISEDDNRRGQEEIQKLTDKYIKEVDQLLEHKEQEIMEV 185


>gi|209964517|ref|YP_002297432.1| ribosome recycling factor frr [Rhodospirillum centenum SW]
 gi|226749936|sp|B6ISU8|RRF_RHOCS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|209957983|gb|ACI98619.1| ribosome recycling factor frr [Rhodospirillum centenum SW]
          Length = 185

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 90/181 (49%), Positives = 123/181 (67%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D+++ + RM   +  L+K+   LRTGR S ++LD V V+AYGS  PLNQVA V V EPR+
Sbjct: 5   DIKSFERRMDGAVETLRKEFGGLRTGRASTTLLDPVYVDAYGSSSPLNQVATVGVPEPRL 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V VWD+ +V +VE+ I E+ LGLNP  +GQ LR+P+PE  +ERR  L KVA  YAE++
Sbjct: 65  ITVQVWDRSLVKAVEKAIREAGLGLNPQSDGQTLRVPIPELNQERRQELAKVAAKYAEQA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++VRN+RRDGMD LKK  K G  SED   +  + +Q +TD+ IK ID     K+KEIM 
Sbjct: 125 RVAVRNVRRDGMDMLKKLLKDGDISEDEQKTWADKVQALTDAHIKKIDEALATKEKEIMQ 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|332701342|ref|ZP_08421430.1| Ribosome-recycling factor [Desulfovibrio africanus str. Walvis Bay]
 gi|332551491|gb|EGJ48535.1| Ribosome-recycling factor [Desulfovibrio africanus str. Walvis Bay]
          Length = 184

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 71/181 (39%), Positives = 113/181 (62%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +++ ++ RM   +  LK++   LRTGR S ++L+ + ++ YGS  P++QVA+V   + R 
Sbjct: 4   EIKELETRMQKVVENLKREFGRLRTGRASTTLLEGINIDYYGSSTPISQVASVATPDSRT 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + +  WD+     +E+ I  S+LGLNP+ +G+++RI +P  TEERR  LVK+   Y E+ 
Sbjct: 64  ITIQPWDRGSFGPIEKAIMTSDLGLNPVNDGKIIRISLPPLTEERRKDLVKLGKKYTEEG 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K++VRNIRRDG D LKK  K    +ED +   +++IQK+TD  +   D     K+KEIM 
Sbjct: 124 KVAVRNIRRDGNDTLKKLEKDKTITEDDLRRGQDEIQKLTDKYVAKCDEALAVKEKEIME 183

Query: 186 F 186
            
Sbjct: 184 I 184


>gi|254504672|ref|ZP_05116823.1| ribosome recycling factor [Labrenzia alexandrii DFL-11]
 gi|222440743|gb|EEE47422.1| ribosome recycling factor [Labrenzia alexandrii DFL-11]
          Length = 187

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 93/184 (50%), Positives = 132/184 (71%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + +DL ++K RM   +S LK D   LRTGR S SMLD + V+AYG  +PL+QV  V+V E
Sbjct: 4   EGVDLDDLKRRMQGALSSLKTDFSGLRTGRASASMLDPISVDAYGQSMPLSQVGTVSVPE 63

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           PRM+ + VWDK MVA+VE+ I ESNLGLNP+V+GQ+LR+P+PE  +ERR  L+KVAH YA
Sbjct: 64  PRMVAIQVWDKSMVAAVEKAIRESNLGLNPVVDGQLLRLPIPELNQERRQELIKVAHKYA 123

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E++K+++R++RRDGMD  KK+ K G+ S+D      +++QK+TD  I  +D+   +K+ E
Sbjct: 124 EQAKVAIRHVRRDGMDDAKKAEKDGEISQDDSRVASDEVQKLTDGMIGEVDAMLAKKEAE 183

Query: 183 IMHF 186
           I   
Sbjct: 184 ISQV 187


>gi|268590529|ref|ZP_06124750.1| ribosome recycling factor [Providencia rettgeri DSM 1131]
 gi|291314115|gb|EFE54568.1| ribosome recycling factor [Providencia rettgeri DSM 1131]
          Length = 185

 Score =  255 bits (652), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++   K  +  +RTGR SPS+LD + VE YGS  PL Q+ANVTV + R L 
Sbjct: 7   KDAQDRMEKSLEAFKSQISKVRTGRASPSLLDGITVEYYGSATPLRQLANVTVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +I
Sbjct: 67  ISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGDAEQGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++DIQK+TDS IK +D    +K+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKDKEISEDDERRSQDDIQKLTDSYIKKVDEALAQKEAELMEF 185


>gi|253687340|ref|YP_003016530.1| ribosome recycling factor [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259494550|sp|C6DAI6|RRF_PECCP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|251753918|gb|ACT11994.1| ribosome recycling factor [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 185

 Score =  255 bits (652), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD ++VE YGS  PL QVANV V + R L 
Sbjct: 7   KDAETRMDKCVEAFKNQISKIRTGRASPSILDGIQVEYYGSATPLRQVANVVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  ITVFDRTLGPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D LK   K    SED     ++D+QK+TD+ IK +D+   EK+ E+M F
Sbjct: 127 SVRNVRRDANDKLKALLKDKAISEDEERRAQDDVQKLTDNFIKKVDTALAEKEAELMEF 185


>gi|183597594|ref|ZP_02959087.1| hypothetical protein PROSTU_00876 [Providencia stuartii ATCC 25827]
 gi|188023090|gb|EDU61130.1| hypothetical protein PROSTU_00876 [Providencia stuartii ATCC 25827]
          Length = 185

 Score =  255 bits (652), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + V+ YG+  PL Q+ANVTV + R L 
Sbjct: 7   KDAQDRMEKSVEALKNQISKVRTGRASPSLLDGIMVDYYGAATPLRQLANVTVEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  ISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  D +K   K  + SED     ++DIQK+TD  IK +D    +K+ E+M F
Sbjct: 127 AVRNIRRDANDKIKALLKDKEISEDEERRSQDDIQKLTDGYIKKVDEALAQKEAELMEF 185


>gi|308185743|ref|YP_003929874.1| Ribosome recycling factor [Pantoea vagans C9-1]
 gi|308056253|gb|ADO08425.1| Ribosome recycling factor [Pantoea vagans C9-1]
          Length = 219

 Score =  254 bits (650), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 119/186 (63%), Gaps = 1/186 (0%)

Query: 2   NQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           N + D++ +   RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV
Sbjct: 34  NVINDIKKDADTRMEKCVEAFKTTISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTV 93

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L ++V+D+ +  +VE+ I +S+LGLNP   G  +R+P+P  TEERR  L+K+   
Sbjct: 94  EDSRTLKINVFDRSLSQAVEKAIMKSDLGLNPSSAGTDIRVPLPALTEERRKDLIKIVRG 153

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++SVRN+RRD  D +K   K  + SED     ++++QK+TD+ IK +D+   EK+
Sbjct: 154 EAEQGRVSVRNVRRDANDKIKALLKDKEISEDDERRAQDEVQKMTDAYIKKVDAALSEKE 213

Query: 181 KEIMHF 186
            E+M F
Sbjct: 214 TELMDF 219


>gi|270264817|ref|ZP_06193081.1| ribosome-recycling factor [Serratia odorifera 4Rx13]
 gi|270041115|gb|EFA14215.1| ribosome-recycling factor [Serratia odorifera 4Rx13]
          Length = 199

 Score =  254 bits (649), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM  ++   K  +  +RTGR SPS+LD + VE YGS  PL Q+ANVTV + R L 
Sbjct: 21  KDADSRMEKSVEAFKTQISKIRTGRASPSILDGIMVEYYGSATPLRQLANVTVEDSRTLA 80

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++++D+ + ++VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 81  INLFDRSLGSAVEKAIMSSDLGLNPSSAGSVIRVPLPPLTEERRKDLIKVVRNEAEQGRV 140

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+KE+M F
Sbjct: 141 AVRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKLLDAALADKEKELMEF 199


>gi|227326540|ref|ZP_03830564.1| ribosome recycling factor [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 185

 Score =  254 bits (649), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD ++VE YGS  PL QVANV V + R L 
Sbjct: 7   KDAETRMDKCVEAFKNQISKIRTGRASPSILDGIQVEYYGSATPLRQVANVVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +I
Sbjct: 67  ISVFDRSLGPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D LK   K    SED     ++D+QK+TD+ IK +D    EK+ E+M F
Sbjct: 127 SVRNVRRDANDKLKALLKDKAISEDEERRAQDDVQKLTDNFIKKVDVALAEKEAELMEF 185


>gi|50119974|ref|YP_049141.1| ribosome recycling factor [Pectobacterium atrosepticum SCRI1043]
 gi|60390249|sp|Q6D8E0|RRF_ERWCT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|49610500|emb|CAG73945.1| ribosome recycling factor [Pectobacterium atrosepticum SCRI1043]
          Length = 185

 Score =  253 bits (648), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YGS  PL Q+ANV V + R L 
Sbjct: 7   KDAETRMDKCVEAFKNQINRIRTGRASPSILDGIHVEYYGSATPLRQLANVVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +I
Sbjct: 67  ISVFDRSLSPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D  K   K    SED     ++D+QK+TD+ IK +D    EK+ E+M F
Sbjct: 127 SVRNVRRDANDKFKALLKDKAISEDEERRAQDDVQKLTDNFIKKVDVALAEKEAELMEF 185


>gi|261822596|ref|YP_003260702.1| ribosome recycling factor [Pectobacterium wasabiae WPP163]
 gi|261606609|gb|ACX89095.1| ribosome recycling factor [Pectobacterium wasabiae WPP163]
          Length = 185

 Score =  253 bits (648), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD ++VE YGS  PL Q+ANV V + R L 
Sbjct: 7   KDAETRMDKCVEAFKNQINRIRTGRASPSILDGIQVEYYGSATPLRQLANVVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +I
Sbjct: 67  ISVFDRSLGPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D  K   K    SED     ++D+QK+TD+ IK +D    EK+ E+M F
Sbjct: 127 SVRNVRRDANDKFKALLKDKAISEDEERRAQDDVQKLTDNFIKKVDVALAEKEAELMEF 185


>gi|170749846|ref|YP_001756106.1| ribosome recycling factor [Methylobacterium radiotolerans JCM 2831]
 gi|190360252|sp|B1LTQ4|RRF_METRJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|170656368|gb|ACB25423.1| ribosome recycling factor [Methylobacterium radiotolerans JCM 2831]
          Length = 187

 Score =  253 bits (648), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 93/182 (51%), Positives = 127/182 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL +IK RM   ++ L KD+ +LRTGR +PS+LD ++V+AYGS +P+ QVA V+V EPR
Sbjct: 6   FDLNDIKRRMQGAVASLSKDLGSLRTGRATPSLLDPIQVDAYGSMMPMAQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L +SVWD+ MV +VE+ I ES+LGLNP  EGQ +R+ +PE  E+RR  +VKVAH Y E+
Sbjct: 66  LLSISVWDRSMVTAVEKAIRESDLGLNPQTEGQTIRLRIPEMNEQRRKEMVKVAHKYTEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+DHLKK  K    SED       D+QK TD  I  ID     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDHLKKLLKDSAISEDDEKRQATDVQKATDQYIAEIDGVLASKEKEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|218888003|ref|YP_002437324.1| ribosome recycling factor [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|226703259|sp|B8DSA1|RRF_DESVM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|66766332|dbj|BAD99030.1| ribosome recycling factor [Desulfovibrio vulgaris]
 gi|218758957|gb|ACL09856.1| ribosome recycling factor [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 186

 Score =  253 bits (648), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 78/186 (41%), Positives = 118/186 (63%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L + ++RM   +  L ++   LRTGR S S++D +KV+ YG+  P++Q+A+V+V
Sbjct: 1   MDMDSILLDAEERMEKALGSLDREFAKLRTGRASTSLVDNIKVDYYGTPTPISQLASVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L +  WD+     VE+ I +S+LGLNP+ +G+++RI +P  TEERR  LVKVA  
Sbjct: 61  PDSRTLTIQPWDRSAFQLVEKAIMKSDLGLNPVNDGKIIRISIPPLTEERRKDLVKVARK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E++K++VRN+RRD  D LKK  K  + SED V    +D+QK+TD  +   D     K+
Sbjct: 121 YTEEAKVAVRNVRRDANDALKKLEKGKEISEDDVRKSTDDVQKLTDRFVAKSDEKCTAKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMEL 186


>gi|227114690|ref|ZP_03828346.1| ribosome recycling factor [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 185

 Score =  253 bits (648), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD ++VE YGS  PL Q+AN+ V + R L 
Sbjct: 7   KDAETRMDKCVEAFKNQINRIRTGRASPSILDGIQVEYYGSATPLRQLANIVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +I
Sbjct: 67  ISVFDRSLGPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D  K   K    SED     ++D+QK+TD+ IK +D    EK+ E+M F
Sbjct: 127 SVRNVRRDANDKFKALLKDKAISEDEERRAQDDVQKLTDNFIKKVDVALAEKEAELMEF 185


>gi|317046985|ref|YP_004114633.1| ribosome recycling factor [Pantoea sp. At-9b]
 gi|316948602|gb|ADU68077.1| ribosome recycling factor [Pantoea sp. At-9b]
          Length = 216

 Score =  253 bits (647), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 38  KDAETRMDKCVEAFKNTISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 97

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ ++
Sbjct: 98  INVFDRSLGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLIKIVRGEAEQGRV 157

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K  + SED     +++IQK+TD  IKN+D+   EK+KE+M F
Sbjct: 158 SVRNVRRDANDKIKALLKDKEISEDDERRAQDEIQKMTDVRIKNVDAALAEKEKELMEF 216


>gi|212710394|ref|ZP_03318522.1| hypothetical protein PROVALCAL_01454 [Providencia alcalifaciens DSM
           30120]
 gi|212686976|gb|EEB46504.1| hypothetical protein PROVALCAL_01454 [Providencia alcalifaciens DSM
           30120]
          Length = 185

 Score =  253 bits (647), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + VE YGS  PL Q+ANVTV + R L 
Sbjct: 7   KDAQDRMEKSLESLKSQISKVRTGRASPSLLDGITVEYYGSATPLRQLANVTVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +I
Sbjct: 67  ISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRKDLIKVVRGDAEQGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     ++DIQK+TD  IK +D    +K+ E+M F
Sbjct: 127 AIRNVRRDANDKVKALLKDKEISEDDERRSQDDIQKLTDHFIKKVDEALAQKEAELMEF 185


>gi|253988128|ref|YP_003039484.1| ribosome recycling factor [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779578|emb|CAQ82739.1| ribosome recycling factor (ribosome-releasing factor) (rrf)
           [Photorhabdus asymbiotica]
          Length = 185

 Score =  253 bits (647), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + VE YG+  PL Q+ANVT  + R L 
Sbjct: 7   KDAQDRMEKSVEALKNQISKVRTGRASPSLLDGITVEYYGAPTPLRQIANVTAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  ++E+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  ITVFDRSMTPAIEKAIMSSDLGLNPSSAGTIIRVPLPPLTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD  D +K   K  + SED     +++IQK+TD+ IK +D    +K++E+M F
Sbjct: 127 SVRNIRRDANDKIKALLKDKEISEDDERRAQDEIQKLTDNFIKKVDEALAKKEEELMEF 185


>gi|307942145|ref|ZP_07657496.1| ribosome recycling factor [Roseibium sp. TrichSKD4]
 gi|307774431|gb|EFO33641.1| ribosome recycling factor [Roseibium sp. TrichSKD4]
          Length = 187

 Score =  253 bits (647), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 91/184 (49%), Positives = 132/184 (71%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + +DL ++  RM   +S LK +   LRTGR S SMLD + V+AYG  +PLNQV  V V E
Sbjct: 4   EGVDLDDLSRRMQGALSVLKTEFSGLRTGRASASMLDPISVDAYGQSMPLNQVGTVNVPE 63

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           PRM+ + VWDK MV++VE+ I ESNLGLNP+V+GQ+LR+P+PE  +ERR  L+KVAH YA
Sbjct: 64  PRMVAIQVWDKGMVSAVEKAIRESNLGLNPVVDGQLLRLPIPELNQERRQELIKVAHKYA 123

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E++K+++R++RRDGMD  KK+ K G  S+D +    +++QK+TD+ I  +D+   +K++E
Sbjct: 124 EQAKVAIRHVRRDGMDTAKKAEKDGDISQDDLHVASDEVQKLTDAKIAEVDTMLAKKEQE 183

Query: 183 IMHF 186
           I   
Sbjct: 184 ISQV 187


>gi|108804238|ref|YP_644175.1| ribosome recycling factor [Rubrobacter xylanophilus DSM 9941]
 gi|123177371|sp|Q1AW65|RRF_RUBXD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|108765481|gb|ABG04363.1| ribosome recycling factor [Rubrobacter xylanophilus DSM 9941]
          Length = 186

 Score =  253 bits (647), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 127/186 (68%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ VIDL + + RM   +  ++    T+RTGR +P++LD ++VEAYG+ +P+  VA++  
Sbjct: 1   MSDVIDLSDAERRMKGALEAVRHQFATIRTGRANPALLDRIEVEAYGTRMPIKSVASIGA 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L ++ +D  ++ ++ER I +S+LGLNP  +G+++R+P+PE TEERR  L+++   
Sbjct: 61  PEPRLLTITPYDPNLLKTIERAIRDSDLGLNPQNDGKIIRLPIPELTEERRRELIRLVRH 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++SVRN+RRD M  +++ R+ G+ SED     E ++QK+TD+ IK ID    EK+
Sbjct: 121 MAEEGRVSVRNVRRDEMHDIQRLRREGEISEDDERRAEAELQKLTDAYIKRIDEALAEKE 180

Query: 181 KEIMHF 186
            E+M  
Sbjct: 181 AELMEV 186


>gi|242240394|ref|YP_002988575.1| ribosome recycling factor [Dickeya dadantii Ech703]
 gi|242132451|gb|ACS86753.1| ribosome recycling factor [Dickeya dadantii Ech703]
          Length = 185

 Score =  253 bits (646), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YGS  PL Q+AN+ V + R L 
Sbjct: 7   KDAETRMDKCVEAFKSQIGKIRTGRASPSLLDGIHVEYYGSATPLRQLANIVVEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ M  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VTVFDRTMGPAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKVVRGDAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D LK   K    SED     +++IQK+TDS IK +D+   +K+KE+M F
Sbjct: 127 SVRNVRRDANDKLKVLLKDKTISEDEERRAQDEIQKLTDSFIKKVDAALADKEKELMDF 185


>gi|229918658|ref|YP_002887304.1| ribosome recycling factor [Exiguobacterium sp. AT1b]
 gi|229470087|gb|ACQ71859.1| ribosome recycling factor [Exiguobacterium sp. AT1b]
          Length = 186

 Score =  253 bits (646), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 85/180 (47%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M    S LK+D  TLRTGR S S+LD V+V+ YG   PLNQVAN+   E R+L
Sbjct: 7   LKTAEEKMEKAHSSLKRDFGTLRTGRASASILDPVQVDYYGVPTPLNQVANINTPEARLL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK MV+ VE+ I +++LGL+P  +G V+R+ +P  TEERR  LVK+   YAE++K
Sbjct: 67  LIQPWDKSMVSEVEKAIQKADLGLSPSSDGTVIRLAIPALTEERRKELVKITKKYAEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  ++LKK  K G+ +ED +    +D+Q +TDS IK ID     K+KEIM  
Sbjct: 127 VAVRNVRRDANENLKKLEKDGELTEDDLRGYADDVQTLTDSYIKKIDESAAIKEKEIMEV 186


>gi|251790742|ref|YP_003005463.1| ribosome recycling factor [Dickeya zeae Ech1591]
 gi|247539363|gb|ACT07984.1| ribosome recycling factor [Dickeya zeae Ech1591]
          Length = 185

 Score =  253 bits (646), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YGS  PL Q+AN+ V + R L 
Sbjct: 7   KDAETRMDKCVEAFKNQISKVRTGRASPSLLDGIHVEYYGSSTPLRQLANIVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VTVFDRTLGPAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D LK   K    SED     ++DIQK+TD  IK ID+   EK+KE+M F
Sbjct: 127 SVRNVRRDANDKLKAQLKDKTISEDEERRAQDDIQKLTDGFIKKIDAALAEKEKELMDF 185


>gi|226313032|ref|YP_002772926.1| ribosome recycling factor [Brevibacillus brevis NBRC 100599]
 gi|254809495|sp|C0ZF63|RRF_BREBN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226095980|dbj|BAH44422.1| ribosome recycling factor [Brevibacillus brevis NBRC 100599]
          Length = 185

 Score =  253 bits (646), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++DRM   I+ LK+D+ +LR GR +P+MLD V V+ YG+  P++Q+AN++V EPRML
Sbjct: 6   LNDMEDRMNKAINALKRDLSSLRAGRANPAMLDRVTVDYYGTPTPISQLANISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  +  ++R + +S+LG++P  +G ++R+ +P  TEERR  LVK+A    E++K
Sbjct: 66  TIQPWDKTALKEIDRALQQSDLGISPSNDGVIIRLIIPPLTEERRKELVKLAGKGGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D +KK  K+   SED     +  IQK TD  I  +D   ++K+K+I+  
Sbjct: 126 VAIRNIRRDANDEIKKLEKAATISEDDSRRHQETIQKTTDKFIAEVDKIVKDKEKDILEV 185


>gi|332976811|gb|EGK13639.1| ribosome recycling factor [Desmospora sp. 8437]
          Length = 185

 Score =  252 bits (645), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 84/179 (46%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM   I  LK+++ ++R GR +PS+LD V VE YGS +PLNQ+AN++  EPR+LV
Sbjct: 7   EDANQRMEKAIQALKRELASIRAGRATPSLLDKVTVECYGSEMPLNQLANISTPEPRLLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WDK  +  VER I +S+LGL P  +G ++RI +P  TEERR  LVKV     E++K+
Sbjct: 67  VQPWDKSTLGDVERAILKSDLGLTPNNDGNLIRITIPALTEERRGELVKVVKKTGEEAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  D +KK  K G+ SED     +++IQK+TD  I+  D   E K+KEIM  
Sbjct: 127 AIRNIRRDANDEMKKLEKKGELSEDEARRGQDEIQKLTDRFIQETDKVVETKEKEIMEV 185


>gi|261344733|ref|ZP_05972377.1| ribosome recycling factor [Providencia rustigianii DSM 4541]
 gi|282567175|gb|EFB72710.1| ribosome recycling factor [Providencia rustigianii DSM 4541]
          Length = 185

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + VE YGS  PL Q+ANVTV + R L 
Sbjct: 7   KDAQDRMEKSLEALKSQISKIRTGRASPSLLDGIVVEYYGSATPLRQLANVTVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE+ +I
Sbjct: 67  ISVFDRSMSPAIEKAIMASDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRGEAEQGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     ++DIQK+TDS IK +D    +K+ E+M F
Sbjct: 127 AIRNVRRDANDKVKALLKDKEISEDDERRSQDDIQKLTDSFIKKVDEALAQKEAELMEF 185


>gi|219669723|ref|YP_002460158.1| ribosome recycling factor [Desulfitobacterium hafniense DCB-2]
 gi|254809508|sp|B8FRG2|RRF_DESHD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219539983|gb|ACL21722.1| ribosome recycling factor [Desulfitobacterium hafniense DCB-2]
          Length = 185

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 83/180 (46%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +DRM   +  LK++  T+R GR +P+MLD + VE YG+  P+NQ+AN++V EPRML
Sbjct: 6   LKEAEDRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  +  +E+ I +S+LGLNP  +G V+R+ +P+ T ERR  +VK     AE S+
Sbjct: 66  TIQPWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKKAEDSR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K   ASED V   ++D+QK+TD  +K ID     K+KEIM  
Sbjct: 126 VAVRNIRRDSNDELKKLEKDHTASEDEVKRAQDDVQKMTDKFVKEIDRIMGTKEKEIMEV 185


>gi|253573556|ref|ZP_04850899.1| ribosome recycling factor [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251847084|gb|EES75089.1| ribosome recycling factor [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 184

 Score =  252 bits (645), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 78/186 (41%), Positives = 118/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M Q I  ++ ++RM   I  L++D+ TLR GR +PS+LD ++V+ YGS  P+NQ+AN+  
Sbjct: 1   MPQTIK-KHAEERMEKAIQALRRDLSTLRAGRATPSLLDRIQVDYYGSPTPINQLANINT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L++  WDK  ++ +ER I +S+LGL P  +G  +R+ +P  TEERR+ LVK+   
Sbjct: 60  PDSRTLLIQPWDKSSLSEIERAIQKSDLGLTPANDGSSIRLTIPALTEERRIELVKMTKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + E++K+++RNIRRD  D +KK  K+   SED     + DIQK TD  I  +D     K+
Sbjct: 120 FGEEAKVAIRNIRRDANDDIKKLEKT-DISEDESRRHQEDIQKTTDKFIAEVDKVLAAKE 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEV 184


>gi|290473660|ref|YP_003466532.1| ribosome releasing factor [Xenorhabdus bovienii SS-2004]
 gi|289172965|emb|CBJ79736.1| ribosome releasing factor [Xenorhabdus bovienii SS-2004]
          Length = 205

 Score =  252 bits (644), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + V+ YGS  PL Q+A+V   + R L 
Sbjct: 27  KDAQDRMEKSVEALKNQISKIRTGRASPSLLDGISVDYYGSATPLRQIASVVAEDARTLA 86

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  ++E+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 87  ITVFDRSMTPAIEKAIMASDLGLNPSSAGTIIRVPLPALTEERRKDLIKVVRGDAEQGRV 146

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD  D +K   K  + SED     +++IQK+TDS IK ID     K+ E+M F
Sbjct: 147 SVRNIRRDANDKVKALLKDKEISEDEERRSQDEIQKLTDSFIKKIDEALASKETELMDF 205


>gi|170738972|ref|YP_001767627.1| ribosome recycling factor [Methylobacterium sp. 4-46]
 gi|190360253|sp|B0UPZ4|RRF_METS4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|168193246|gb|ACA15193.1| ribosome recycling factor [Methylobacterium sp. 4-46]
          Length = 187

 Score =  252 bits (644), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 90/182 (49%), Positives = 131/182 (71%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL +IK RM   ++ LK D+ +LRTGR SP++LD ++VEAYG+ +P+ QVA ++V EPR
Sbjct: 6   FDLADIKRRMQGAVNSLKHDLGSLRTGRASPTLLDPIQVEAYGAAMPMAQVATISVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V+VWD+ MV++VE+ I ES+LGLNP+ EGQ +R+ +PE  E+RR  +VKVAH YAE+
Sbjct: 66  LLSVAVWDRGMVSAVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYAEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K G  S+D      + +QK+TD  I  +D     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDLLKKLEKDGAISQDDEKRQADQVQKVTDQHIAEVDQTLAAKEKEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|297584070|ref|YP_003699850.1| ribosome recycling factor [Bacillus selenitireducens MLS10]
 gi|297142527|gb|ADH99284.1| ribosome recycling factor [Bacillus selenitireducens MLS10]
          Length = 185

 Score =  252 bits (644), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+N ++RM  ++    +++ ++R GR +PS+LD V+VE YG   PLNQ+A ++V E R+L
Sbjct: 6   LKNAEERMNKSLESFGRELGSVRAGRANPSILDRVQVEYYGMMTPLNQLATISVPEGRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +DK  +  +E+ I +++LGL+P  +G ++RI +P  TEERR  L+KV   YAE +K
Sbjct: 66  VVQPFDKSSLPDIEKAIQKADLGLSPSNDGNIIRISIPALTEERRKELIKVVGRYAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K G+ +ED +   ++D+QK+TD  IK ID   + K+ +I   
Sbjct: 126 VAVRNVRRDANDELKKLEKDGEMTEDELRRGQDDVQKLTDDYIKKIDERVKAKENDIKEV 185


>gi|317484674|ref|ZP_07943575.1| ribosome recycling factor [Bilophila wadsworthia 3_1_6]
 gi|316924030|gb|EFV45215.1| ribosome recycling factor [Bilophila wadsworthia 3_1_6]
          Length = 186

 Score =  252 bits (644), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 115/186 (61%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++   L + +DRM   +  L +D   LRTGR S  ++D +KV+ YG+  P++Q+A+V +
Sbjct: 1   MDKESVLLDSEDRMDKALGALDRDFSRLRTGRASTGLVDNIKVDYYGTPTPISQLASVAI 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + +  WD+   A VE+ I +S+LGL P+ +G+++RI +P  TE+RR  L K+A  
Sbjct: 61  PDSRTITIQPWDRGAFAGVEKAILKSDLGLTPVNDGKIIRISIPPLTEDRRKELGKLARK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++K++VRN+RRD  D LKK  K    SED +    +D+QK+TD  +  +D     K+
Sbjct: 121 SGEEAKVAVRNVRRDANDQLKKLEKDKAISEDELKKATDDVQKLTDRYVAKVDEKCAAKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMDL 186


>gi|225181371|ref|ZP_03734815.1| ribosome recycling factor [Dethiobacter alkaliphilus AHT 1]
 gi|225167952|gb|EEG76759.1| ribosome recycling factor [Dethiobacter alkaliphilus AHT 1]
          Length = 185

 Score =  252 bits (644), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 84/179 (46%), Positives = 123/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + ++RM   +S LK+D+ TLR GR +PS+LD + V+ YGS +P+NQ+ANV+  EPR+LV
Sbjct: 7   SDAQERMEKAVSALKRDLATLRAGRATPSLLDKIVVDYYGSSMPINQLANVSTPEPRLLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  VA VER I +S+LGL P+ +G ++R+ +P+ TEERR  LVKV+   AE  ++
Sbjct: 67  IQPWDKNAVAEVERAILKSDLGLTPVSDGSIIRLAIPQLTEERRKELVKVSKKKAEDGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  + LK+  K  + +ED +   ++DIQK+TD  I   DS  + K+KEIM  
Sbjct: 127 SIRNIRRDANEDLKRLEKDNEITEDELHKAQDDIQKLTDKFIAEADSVLDAKEKEIMEV 185


>gi|27379969|ref|NP_771498.1| ribosome recycling factor [Bradyrhizobium japonicum USDA 110]
 gi|34924950|sp|Q89KP6|RRF_BRAJA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|27353122|dbj|BAC50123.1| ribosome recycling factor [Bradyrhizobium japonicum USDA 110]
          Length = 188

 Score =  252 bits (644), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 98/182 (53%), Positives = 128/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL  +K RM   +  LK ++  LRTGR S SMLD V+VEAYGSH+PLNQ+A V+V EPR
Sbjct: 7   FDLNEVKRRMQGAVQSLKHELGGLRTGRASASMLDPVQVEAYGSHMPLNQLATVSVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ++ V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  EERR  LVKVAH YAE 
Sbjct: 67  LISVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEA 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++ R++RRDG+D LKK  K+ + SED      +++QK+TD TI  ID     K+KEI+
Sbjct: 127 AKVAARHVRRDGLDVLKKLEKNHEMSEDDQKRHADEVQKVTDGTIAEIDQLLAAKEKEIL 186

Query: 185 HF 186
             
Sbjct: 187 TV 188


>gi|163795639|ref|ZP_02189605.1| Ribosome recycling factor [alpha proteobacterium BAL199]
 gi|159179238|gb|EDP63771.1| Ribosome recycling factor [alpha proteobacterium BAL199]
          Length = 185

 Score =  251 bits (643), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 92/182 (50%), Positives = 129/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +DL +I+ RM   +  L+ +   LRTGR S S+L+ + VEAYGS +PLNQVA ++V EPR
Sbjct: 4   LDLDDIERRMDGAVVALRAEFSGLRTGRASASLLEPIHVEAYGSRMPLNQVATISVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V VWD+ M  +VE+ I ES+LGLNP  +GQ++R+P+P+ +EERR  LVKVA  YAE 
Sbjct: 64  MISVQVWDRAMSKAVEKAIRESDLGLNPQSDGQLIRVPLPDLSEERRTELVKVASKYAES 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMDHLKK+ K G  S+D     E++IQ+ TD  +K ID     K+K+IM
Sbjct: 124 ARVAVRNVRRDGMDHLKKAEKDGDVSQDERRLYEDEIQEQTDKHVKAIDEALASKEKDIM 183

Query: 185 HF 186
             
Sbjct: 184 QV 185


>gi|150396353|ref|YP_001326820.1| ribosome recycling factor [Sinorhizobium medicae WSM419]
 gi|166231511|sp|A6U8K5|RRF_SINMW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|150027868|gb|ABR59985.1| ribosome recycling factor [Sinorhizobium medicae WSM419]
          Length = 186

 Score =  251 bits (643), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 110/186 (59%), Positives = 137/186 (73%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ +DL+ +K RM   IS  K D+ +LRTGR S ++LD V VEAYGS +PLNQVAN+TV
Sbjct: 1   MSEGVDLKELKRRMDGAISAFKHDIASLRTGRASANVLDPVTVEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEARMLSVSVWDKSMVGAVERAIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK++VR++RRDGMD LKK+ K G+  +D   +    +QK+TD  I  ID    +K+
Sbjct: 121 YAEKSKVAVRHVRRDGMDDLKKAEKDGEIGQDESRAQSERVQKMTDDVISEIDRLLADKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|52785632|ref|YP_091461.1| ribosome recycling factor [Bacillus licheniformis ATCC 14580]
 gi|163119440|ref|YP_079046.2| ribosome recycling factor [Bacillus licheniformis ATCC 14580]
 gi|319645965|ref|ZP_08000195.1| ribosome-recycling factor [Bacillus sp. BT1B_CT2]
 gi|60390243|sp|Q65JJ6|RRF_BACLD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|52348134|gb|AAU40768.1| Frr [Bacillus licheniformis ATCC 14580]
 gi|145902947|gb|AAU23408.2| ribosome recycling factor [Bacillus licheniformis ATCC 14580]
 gi|317391715|gb|EFV72512.1| ribosome-recycling factor [Bacillus sp. BT1B_CT2]
          Length = 185

 Score =  251 bits (643), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K+RM   IS  ++++ T+R GR +PS+LD V VE YG+  PLNQ+A++TV E RML
Sbjct: 6   MNETKERMQKAISAYQRELATVRAGRANPSLLDKVAVEYYGAQTPLNQIASITVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  L K+   Y+E +K
Sbjct: 66  VITPYDKTALGDIEKAIQKADLGVTPSNDGNIIRITIPPLTEERRKELAKLVKKYSEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+G+ +ED + S   D+QK+TD  +  ID   ++K+KEIM  
Sbjct: 126 VAVRNIRRDANDDLKKLEKNGEMTEDELRSSTEDVQKLTDEYVSKIDEITKDKEKEIMEV 185


>gi|15614987|ref|NP_243290.1| ribosome recycling factor [Bacillus halodurans C-125]
 gi|14195173|sp|Q9KA66|RRF_BACHD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|10175044|dbj|BAB06143.1| ribosome recycling factor [Bacillus halodurans C-125]
          Length = 185

 Score =  251 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 80/180 (44%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + RM      L +++  LR GR +P+MLD + VE YG+  PLNQ+A ++V E R+L
Sbjct: 6   LNDAEQRMTKATEALGRELAKLRAGRANPAMLDRITVEYYGAETPLNQLATISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  ++ +ER I +S+LGL P  +G V+RI +P  TEERR  L K+    AE++K
Sbjct: 66  VIQPFDKSSISDIERAIQKSDLGLTPSNDGTVIRITIPPLTEERRRDLTKLVKKSAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK +K G+ +ED +  +  D+QK+TD  I+ ID   E K+KEIM  
Sbjct: 126 VAVRNIRRDANDDLKKRQKDGELTEDDLRRVTEDVQKLTDKYIEQIDQKAEAKEKEIMEV 185


>gi|239826646|ref|YP_002949270.1| ribosome recycling factor [Geobacillus sp. WCH70]
 gi|259494544|sp|C5D9B8|RRF_GEOSW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|239806939|gb|ACS24004.1| ribosome recycling factor [Geobacillus sp. WCH70]
          Length = 185

 Score =  251 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K++M   +    +++ T+R GR +PS+L+ V V+ YG   P+ Q+A+++V E R+L
Sbjct: 6   INTAKEKMDKAVQAFTRELATIRAGRANPSLLEKVTVDYYGMPTPIIQLASISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E+ I  S+LGL P  +G V+RI +P  TEERR  LVK+   Y+E +K
Sbjct: 66  VIQPYDKSVIKDIEKAILSSDLGLTPSNDGSVIRITIPPLTEERRRELVKLVKKYSEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+G+ +ED +    +D+QK+TD  I  ID+  +EK+KE+M  
Sbjct: 126 VAVRNIRRDANDELKKLEKNGEITEDELRGYTDDVQKLTDDHIAKIDAITKEKEKEVMEV 185


>gi|220921531|ref|YP_002496832.1| ribosome recycling factor [Methylobacterium nodulans ORS 2060]
 gi|254809520|sp|B8INK3|RRF_METNO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219946137|gb|ACL56529.1| ribosome recycling factor [Methylobacterium nodulans ORS 2060]
          Length = 187

 Score =  251 bits (642), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 89/182 (48%), Positives = 132/182 (72%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL ++K RM   ++ LK D+ +LRTGR SP++LD +++EAYG+ +P+ QVA ++V EPR
Sbjct: 6   FDLADLKRRMQGAVNALKHDLGSLRTGRASPTLLDPIQIEAYGAVMPMAQVATISVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V+VWD+ MV++VE+ I ES+LGLNP+ EGQ +R+ +PE +E+RR  +VKVAH YAE+
Sbjct: 66  LLSVAVWDRGMVSAVEKAIRESDLGLNPMTEGQTIRLRIPEMSEQRRKEMVKVAHKYAEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K G  S+D      + +QKITD  I  +D     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDLLKKLEKDGAISQDDEKRQADQVQKITDQHIAEVDQTLAAKEKEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|271499498|ref|YP_003332523.1| ribosome recycling factor [Dickeya dadantii Ech586]
 gi|270343053|gb|ACZ75818.1| ribosome recycling factor [Dickeya dadantii Ech586]
          Length = 185

 Score =  251 bits (642), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SP++LD + VE YGS  PL Q+AN+ V + R L 
Sbjct: 7   KDAETRMDKCVEAFKNQISKVRTGRASPTLLDGIHVEYYGSATPLRQLANIVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VTVFDRTLGPAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D LK   K    SED     ++D+QK+TD  IK ID+   EK+KE+M F
Sbjct: 127 SVRNVRRDANDKLKAQLKDKTISEDEERRAQDDVQKLTDGFIKKIDAALAEKEKELMDF 185


>gi|212639532|ref|YP_002316052.1| ribosome recycling factor [Anoxybacillus flavithermus WK1]
 gi|212561012|gb|ACJ34067.1| Ribosome recycling factor [Anoxybacillus flavithermus WK1]
          Length = 183

 Score =  251 bits (642), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N K++M   +    +++ T+R GR +P++L+ + V+ YG   P+ Q+A + V E R+L
Sbjct: 4   LTNAKEKMDKAVQAFSRELATIRAGRANPALLEKITVDYYGMPTPIIQLAGIQVPEARLL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E+ I  S+LGL P  +G V+RI +P  TEERR  LVK+   YAE++K
Sbjct: 64  VIQPYDKSVLKEIEKAILASDLGLTPSNDGSVIRISIPPLTEERRRELVKLVKKYAEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+G+ +ED +     DIQK+TD  I  ID+  +EK+KE+M  
Sbjct: 124 VAVRNIRRDANDELKKLEKNGEITEDELRGYTEDIQKLTDDHIAKIDAITKEKEKEVMEV 183


>gi|15965251|ref|NP_385604.1| ribosome recycling factor [Sinorhizobium meliloti 1021]
 gi|307309274|ref|ZP_07588942.1| ribosome recycling factor [Sinorhizobium meliloti BL225C]
 gi|307317016|ref|ZP_07596457.1| ribosome recycling factor [Sinorhizobium meliloti AK83]
 gi|22001945|sp|Q92Q52|RRF_RHIME RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|15074431|emb|CAC46077.1| Probable ribosome recycling factor (ribosome releasing factor)
           [Sinorhizobium meliloti 1021]
 gi|306897104|gb|EFN27849.1| ribosome recycling factor [Sinorhizobium meliloti AK83]
 gi|306900275|gb|EFN30892.1| ribosome recycling factor [Sinorhizobium meliloti BL225C]
          Length = 186

 Score =  251 bits (642), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 110/186 (59%), Positives = 137/186 (73%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ +DL+ +K RM   I+  K D+ +LRTGR S ++LD V VEAYGS +PLNQVAN+TV
Sbjct: 1   MSEGVDLKELKRRMDGAIAAFKHDIASLRTGRASANVLDPVTVEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK++VR++RRDGMD LKK+ K G+  +D   +    +QK+TD  I  ID    EK+
Sbjct: 121 YAEKSKVAVRHVRRDGMDDLKKAEKDGEIGQDESRAQSERVQKMTDDVISEIDRLLAEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|90419595|ref|ZP_01227505.1| ribosome recycling factor [Aurantimonas manganoxydans SI85-9A1]
 gi|90336532|gb|EAS50273.1| ribosome recycling factor [Aurantimonas manganoxydans SI85-9A1]
          Length = 185

 Score =  251 bits (641), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 103/182 (56%), Positives = 129/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +DL  +K RM   I+ LK D+  LRTGR SPS+LD + V+AYGS +PLNQVANV+V EPR
Sbjct: 4   MDLNELKRRMDGAITSLKSDLTGLRTGRASPSLLDPIYVDAYGSKMPLNQVANVSVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V+VWDK+MV  VER I ESNLGLNPI +G  LRIP+PE  E+RR  LVKVAH YAE 
Sbjct: 64  MVTVTVWDKQMVGKVERAIRESNLGLNPITDGATLRIPLPELNEQRRKELVKVAHQYAEG 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDGM+ LKK  K G   +D      + +QK+TD TI  IDS    K+ EIM
Sbjct: 124 AKVAVRHVRRDGMETLKKLEKDGDIGQDESRQQSDRVQKMTDETISEIDSALAVKEAEIM 183

Query: 185 HF 186
             
Sbjct: 184 QV 185


>gi|120603155|ref|YP_967555.1| ribosome recycling factor [Desulfovibrio vulgaris DP4]
 gi|166230784|sp|A1VFB2|RRF_DESVV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120563384|gb|ABM29128.1| ribosome recycling factor [Desulfovibrio vulgaris DP4]
          Length = 186

 Score =  251 bits (641), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 121/186 (65%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L + ++RM   I+ L+++   LRTGR S S++D +KV+ YG+  P++QVA+V V
Sbjct: 1   MDMESILLDAEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + +  WD+   + +E+ I +S+LGLNP+ +G+++RI +P  TEERR  L K+A  
Sbjct: 61  PDSRCITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE++K++VRN+RRD  + LKK  K+ + SED +   + D+QK+TD  +   D     K+
Sbjct: 121 YAEEAKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQEDVQKLTDRFVAKTDEKAGAKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMDI 186


>gi|78356175|ref|YP_387624.1| ribosome recycling factor [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123552884|sp|Q313G7|RRF_DESDG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78218580|gb|ABB37929.1| ribosome recycling factor [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 184

 Score =  251 bits (641), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM   ++ L ++   LRTGR S S++D +KV+ YG+  P+NQ+A+V V + R +
Sbjct: 5   LLETEERMEKAVAALDREFGRLRTGRASTSLVDSIKVDYYGTPTPINQLASVAVPDSRTI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+   A VE+ I +S+LGL PI +G+++RI +P  TEERR  LVKVA  Y E +K
Sbjct: 65  TIQPWDRGAFALVEKAIMQSDLGLTPINDGKIIRISMPPLTEERRKELVKVAKKYTEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + +KK  K    +ED +   ++++QK+TD+ +   +    +K+KEIM  
Sbjct: 125 VAVRNIRRDANEQIKKMEKDKAITEDDMKRGQDEVQKLTDAFVAKSEKVLAKKEKEIMEV 184


>gi|85716993|ref|ZP_01047956.1| ribosome recycling factor [Nitrobacter sp. Nb-311A]
 gi|85696195|gb|EAQ34090.1| ribosome recycling factor [Nitrobacter sp. Nb-311A]
          Length = 187

 Score =  251 bits (641), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 99/182 (54%), Positives = 128/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+ ++K RM      LK ++  LRTGR S SMLD V+V+AYGSH+PLNQVA ++V EPR
Sbjct: 6   FDIGDLKRRMQGATQSLKHELGGLRTGRASASMLDPVQVDAYGSHMPLNQVATISVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDG+D LKK  K+ + SED    L N++QK TD  I  ID     K+KEI+
Sbjct: 126 AKVAVRHVRRDGLDTLKKLEKTHEISEDDEKRLANEVQKATDGVISEIDQLLAGKEKEIL 185

Query: 185 HF 186
             
Sbjct: 186 TV 187


>gi|75676047|ref|YP_318468.1| ribosome recycling factor [Nitrobacter winogradskyi Nb-255]
 gi|123613278|sp|Q3SRH5|RRF_NITWN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|74420917|gb|ABA05116.1| ribosome recycling factor [Nitrobacter winogradskyi Nb-255]
          Length = 187

 Score =  251 bits (641), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 101/182 (55%), Positives = 129/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+ ++K RM      LK ++  LRTGR S SMLD V+V+AYGSH+PLNQVA ++V EPR
Sbjct: 6   FDIGDLKRRMQGATQSLKHELGGLRTGRASSSMLDPVQVDAYGSHMPLNQVATISVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDG+D LKK  K+ + SED    L ND+QK TDS I  ID     K+KEI+
Sbjct: 126 AKVAVRHVRRDGLDTLKKLEKNHEISEDDEKRLANDVQKATDSVISEIDQLLAGKEKEIL 185

Query: 185 HF 186
             
Sbjct: 186 TV 187


>gi|288553032|ref|YP_003424967.1| ribosome recycling factor [Bacillus pseudofirmus OF4]
 gi|288544192|gb|ADC48075.1| ribosome recycling factor [Bacillus pseudofirmus OF4]
          Length = 185

 Score =  251 bits (641), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 80/180 (44%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q+ K+RM   I  L +++  LR GR +P++LD V VE YG+  PLNQ+A +TV E R+L
Sbjct: 6   MQDAKERMTKAIESLNRELAKLRAGRANPAILDRVTVEYYGAETPLNQLATITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +  +ER I +++LGL P  +G V+RI +P  TEERR  LVK+    AE+ K
Sbjct: 66  MIQPFDKTSMNDIERAIQKADLGLTPSNDGTVIRIAIPPLTEERRRELVKLVKKSAEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK +K G+ +ED +    +D+QK+TD  I +ID+  ++K+KEIM  
Sbjct: 126 VAVRNVRRDANDDLKKLQKDGEMTEDELRRYTDDVQKLTDKHISDIDAVADKKEKEIMEV 185


>gi|302342180|ref|YP_003806709.1| ribosome recycling factor [Desulfarculus baarsii DSM 2075]
 gi|301638793|gb|ADK84115.1| ribosome recycling factor [Desulfarculus baarsii DSM 2075]
          Length = 185

 Score =  251 bits (641), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              K+RM   I  LK+D   +RTGR +P++LD V+ + YG   PLNQ+A ++V E R++V
Sbjct: 7   NEAKERMHKAIEALKRDFSRVRTGRATPTILDGVRADYYGQPTPLNQMAGISVPEARLIV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD +    +E+ I  S+LGL P  +G+V+RI  P  T+ERR  L K+    AE++K+
Sbjct: 67  IQPWDPKSCELIEKAILASDLGLTPQSDGKVVRINFPPLTQERRKDLAKLVRKMAEEAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VR  RRD  + LK+ +K G+ SED     + +IQK TD  IK +D    EK+KEIM F
Sbjct: 127 AVRAARRDANEMLKEFKKEGEISEDDAFRGQEEIQKTTDDFIKKVDETLAEKEKEIMEF 185


>gi|89895289|ref|YP_518776.1| hypothetical protein DSY2543 [Desulfitobacterium hafniense Y51]
 gi|122482357|sp|Q24UG0|RRF_DESHY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|89334737|dbj|BAE84332.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 185

 Score =  250 bits (640), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 82/180 (45%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +DRM   +  LK++  T+R GR +P+MLD + VE YG+  P+NQ+AN++V EPRML
Sbjct: 6   LKEAEDRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  +  +E+ I +S+LGLNP  +G V+R+ +P+ T ERR  +VK     AE S+
Sbjct: 66  TIQPWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKKAEDSR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K   ASED V   ++D+QK+TD  +K I+     K+KEIM  
Sbjct: 126 VAVRNIRRDSNDELKKLEKDHTASEDEVKRAQDDVQKMTDKFVKEIERIMGTKEKEIMEV 185


>gi|42782915|ref|NP_980162.1| ribosome recycling factor [Bacillus cereus ATCC 10987]
 gi|206978510|ref|ZP_03239367.1| ribosome recycling factor [Bacillus cereus H3081.97]
 gi|217961244|ref|YP_002339812.1| ribosome recycling factor [Bacillus cereus AH187]
 gi|229140465|ref|ZP_04269020.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST26]
 gi|229197934|ref|ZP_04324650.1| Ribosome-recycling factor [Bacillus cereus m1293]
 gi|60390260|sp|Q732P5|RRF_BACC1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703254|sp|B7HLF7|RRF_BACC7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|42738842|gb|AAS42770.1| ribosome recycling factor [Bacillus cereus ATCC 10987]
 gi|206743279|gb|EDZ54729.1| ribosome recycling factor [Bacillus cereus H3081.97]
 gi|217063331|gb|ACJ77581.1| ribosome recycling factor [Bacillus cereus AH187]
 gi|228585652|gb|EEK43754.1| Ribosome-recycling factor [Bacillus cereus m1293]
 gi|228643026|gb|EEK99302.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST26]
 gi|324327721|gb|ADY22981.1| ribosome recycling factor [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 185

 Score =  250 bits (640), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR + S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSANEKMEKAVAAYSRELATVRAGRANASVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+KEIM  
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV 185


>gi|46579283|ref|YP_010091.1| ribosome recycling factor [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|60390259|sp|Q72DQ9|RRF_DESVH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|46448697|gb|AAS95350.1| ribosome recycling factor [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233111|gb|ADP85965.1| ribosome recycling factor [Desulfovibrio vulgaris RCH1]
          Length = 186

 Score =  250 bits (640), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 121/186 (65%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L + ++RM   I+ L+++   LRTGR S S++D +KV+ YG+  P++QVA+V V
Sbjct: 1   MDMDSILLDAEERMEKAIAALEREFSRLRTGRASASLVDGIKVDYYGTPTPISQVASVAV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + +  WD+   + +E+ I +S+LGLNP+ +G+++RI +P  TEERR  L K+A  
Sbjct: 61  PDSRCITIQPWDRNAFSLIEKAILKSDLGLNPVNDGKIIRINIPPLTEERRKDLGKMARK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE++K++VRN+RRD  + LKK  K+ + SED +   + D+QK+TD  +   D     K+
Sbjct: 121 YAEEAKVAVRNVRRDANEQLKKLEKNKELSEDDLRKAQEDVQKLTDRFVAKTDEKAGAKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMDI 186


>gi|220903796|ref|YP_002479108.1| ribosome recycling factor [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868095|gb|ACL48430.1| ribosome recycling factor [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 186

 Score =  250 bits (640), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRM   ++ L +D   LRTGR + +++D +K + YG+  P++Q+A++ V + R L
Sbjct: 7   LLDAEDRMEKALAALDRDFAKLRTGRATTALVDGIKADYYGTPTPISQMASIAVPDSRTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  +A +E+ I +S+LGL P+ +G+++RI +P  TEERR  L KVA  Y+E+ K
Sbjct: 67  TIQPWDKGGIALIEKAILKSDLGLTPVNDGKLIRIVMPPLTEERRKELSKVARKYSEEGK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K    +ED      +D+QK+TD  +  +D     K+KEIM  
Sbjct: 127 VAVRNVRRDANDSLKKLEKEKTITEDEQKRATDDVQKLTDKYVAEVDKRCAAKEKEIMEI 186


>gi|218288327|ref|ZP_03492626.1| ribosome recycling factor [Alicyclobacillus acidocaldarius LAA1]
 gi|218241686|gb|EED08859.1| ribosome recycling factor [Alicyclobacillus acidocaldarius LAA1]
          Length = 187

 Score =  250 bits (640), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 82/180 (45%), Positives = 126/180 (70%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +QN+++RM   I  L+++  T+R GR +PSMLD V VE YG+ +P+NQVA+VT  EPR+L
Sbjct: 8   IQNLQERMDKAIQNLRREFATVRAGRAAPSMLDHVMVEYYGAQMPVNQVASVTSPEPRLL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S WDK M++ +E+ I +S+LGLNP  +G V+R+ +P  TE+RR  LVK     AE+++
Sbjct: 68  VISPWDKSMLSEIEKAIQKSDLGLNPANDGNVIRLTIPALTEQRRQELVKQVRKMAEEAR 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRDG + +KK  K+G  SED V  L + +Q++TD  I  +D   E+K+K++   
Sbjct: 128 VAIRNIRRDGNEEIKKLEKAGDISEDDVRRLMDRVQQLTDKAIAQVDRLLEDKEKDVTQV 187


>gi|56419787|ref|YP_147105.1| ribosome recycling factor [Geobacillus kaustophilus HTA426]
 gi|297530573|ref|YP_003671848.1| ribosome recycling factor [Geobacillus sp. C56-T3]
 gi|319766267|ref|YP_004131768.1| ribosome recycling factor [Geobacillus sp. Y412MC52]
 gi|60390228|sp|Q5L0J9|RRF_GEOKA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56379629|dbj|BAD75537.1| ribosome recycling factor [Geobacillus kaustophilus HTA426]
 gi|297253825|gb|ADI27271.1| ribosome recycling factor [Geobacillus sp. C56-T3]
 gi|317111133|gb|ADU93625.1| ribosome recycling factor [Geobacillus sp. Y412MC52]
          Length = 185

 Score =  250 bits (639), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  K++M   +    +++ ++R GR +  +L+ V V+ YG   P+NQ+A+++V E R+L
Sbjct: 6   IQQAKEKMDKAVQAFTRELASIRAGRANAGLLEKVTVDYYGVPTPINQLASISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I  S+LGL P  +G V+R+ +P  TEERR  L K+   Y+E +K
Sbjct: 66  VIQPYDKSAIKEMEKAILASDLGLTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+G+ +ED + S  +++QK+TD  I  ID+  +EK+KE+M  
Sbjct: 126 VAVRNIRRDANDELKKLEKNGEITEDELRSYTDEVQKLTDDHIAKIDAITKEKEKEVMEV 185


>gi|88812380|ref|ZP_01127630.1| Ribosome recycling factor [Nitrococcus mobilis Nb-231]
 gi|88790387|gb|EAR21504.1| Ribosome recycling factor [Nitrococcus mobilis Nb-231]
          Length = 185

 Score =  250 bits (639), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 81/186 (43%), Positives = 116/186 (62%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M + I+ ++   RMG +I  L  +   +RTGR   S+LD + V  YG+ +PLNQVA+VTV
Sbjct: 1   MTEDIN-KDAAARMGKSIEALNHEFHKIRTGRAHTSLLDHITVTYYGAKMPLNQVASVTV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +PR L V+ W+K M+  VE+ I ES+LGL P   G V+RIP+P  TEERR  L++V   
Sbjct: 60  SDPRTLSVTPWEKGMIPVVEKAILESDLGLTPNTAGGVIRIPLPPLTEERRRELIRVVKH 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+++I++RN+RRD    LK   K  + +ED     E+DIQK+TD  I  +DS    K+
Sbjct: 120 ETEQARIAIRNVRRDANSALKARLKDKEITEDDEKRAEDDIQKLTDKHISEVDSLLVAKE 179

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 180 KELMEV 185


>gi|294500908|ref|YP_003564608.1| ribosome recycling factor [Bacillus megaterium QM B1551]
 gi|295706254|ref|YP_003599329.1| ribosome recycling factor [Bacillus megaterium DSM 319]
 gi|294350845|gb|ADE71174.1| ribosome recycling factor [Bacillus megaterium QM B1551]
 gi|294803913|gb|ADF40979.1| ribosome recycling factor [Bacillus megaterium DSM 319]
          Length = 185

 Score =  250 bits (639), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 80/180 (44%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQN K+RM   I    +++ ++R GR S S+LD V VE YG+  P+NQ+A V+V E RML
Sbjct: 6   LQNAKERMEKAIQSFSRELASIRAGRASASLLDRVTVEYYGAPTPINQLAQVSVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  VE+ I +S+LGL P  +G ++R+ +P  TEERR  LVK+   YAE++K
Sbjct: 66  VIQPYDKSQIGEVEKAILKSDLGLTPTSDGTIIRLSIPALTEERRRELVKMVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D  KK  K G+ +ED +    +DIQK+TD  I  +D   ++K++EIM  
Sbjct: 126 VAVRNVRRDANDDFKKLEKKGEITEDDLRGYSDDIQKLTDDHIVKVDKVAKDKEEEIMAV 185


>gi|251797408|ref|YP_003012139.1| ribosome recycling factor [Paenibacillus sp. JDR-2]
 gi|247545034|gb|ACT02053.1| ribosome recycling factor [Paenibacillus sp. JDR-2]
          Length = 184

 Score =  250 bits (639), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 80/186 (43%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M Q I  ++ ++RM   I  LK+D+ TLR GR +P++LD V+VE YG+  P+ Q+AN+ V
Sbjct: 1   MPQAIK-KSAEERMEKAIGALKRDLATLRAGRATPALLDRVQVEYYGAPTPVAQLANINV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L +  WDK  +A++E+ I +S+LGL P  +G  +RI +P  TEERR  LVK    
Sbjct: 60  PDSRTLFIQPWDKSSIAAIEKAIMKSDLGLTPSNDGSAIRITLPPLTEERRSELVKTTKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + E++K+++RNIRRD  D +KK  K+   SED     + DIQK TD  I  +D     K+
Sbjct: 120 FGEEAKVAIRNIRRDANDDIKKLEKT-TISEDESRRHQEDIQKATDRFIAEVDKVLVAKE 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEV 184


>gi|154248356|ref|YP_001419314.1| ribosome recycling factor [Xanthobacter autotrophicus Py2]
 gi|238686805|sp|A7INR3|RRF_XANP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|154162441|gb|ABS69657.1| ribosome recycling factor [Xanthobacter autotrophicus Py2]
          Length = 187

 Score =  250 bits (639), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 96/182 (52%), Positives = 129/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+ ++K RM   +  L+ ++  LRTGR S S+LD + +EAYG+ +PLNQVA V+V E R
Sbjct: 6   FDMSDLKRRMQGAVGVLRDELGGLRTGRASASLLDPITIEAYGARMPLNQVATVSVPEAR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWD+ MV++VE+ I +SNLGLNP  EGQVLR+ +PE  +ERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDRGMVSAVEKAIRDSNLGLNPNTEGQVLRLRIPELNQERRQELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDGMDHLKK  K G+ S D +  L  D+QK TD TI  ID    +K+KEI+
Sbjct: 126 AKVAVRHVRRDGMDHLKKVEKDGEMSSDDLDRLSKDVQKATDETIAEIDQTLAQKEKEIL 185

Query: 185 HF 186
             
Sbjct: 186 SV 187


>gi|298529658|ref|ZP_07017061.1| ribosome recycling factor [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511094|gb|EFI34997.1| ribosome recycling factor [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 184

 Score =  250 bits (639), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 125/186 (67%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+QV+D  + +++M   I+ L KD+  LRTGR S  ++D + VE YG+  PLNQ+A++++
Sbjct: 1   MDQVLD--DCREKMDKAIASLDKDLAKLRTGRASVGLVDGITVEYYGTMTPLNQLASISI 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + +  WD+ + + +E+ I +S+LGLNP+ +G+++RI +P  TEERR  LVK+A  
Sbjct: 59  PDSRTIAIQPWDRNVFSGIEKAIMKSDLGLNPVSDGKIIRINIPPLTEERRKDLVKMAKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y+E +K+++RN+RR+  D LKK +     +ED +     ++QKITDS +  +D    +K+
Sbjct: 119 YSEDAKVALRNVRREANDTLKKMKNDKDLTEDEMHKGHEEVQKITDSYVSKVDRILADKE 178

Query: 181 KEIMHF 186
           KEIM F
Sbjct: 179 KEIMEF 184


>gi|303247584|ref|ZP_07333855.1| ribosome recycling factor [Desulfovibrio fructosovorans JJ]
 gi|302491064|gb|EFL50958.1| ribosome recycling factor [Desulfovibrio fructosovorans JJ]
          Length = 184

 Score =  250 bits (639), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +DRM   ++ L K+   LRTGR + S+LD ++V+ YG+  PL+Q+A+V+  + R +
Sbjct: 5   LKDAEDRMQKALASLDKEFARLRTGRATTSLLDGIRVDYYGTPTPLDQMASVSTPDSRTI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ WD++    VE+ I +S+LGL P+ +G+++RI +P  TE+RR  L KVA  YAE++K
Sbjct: 65  TIAPWDRKAFHDVEKAILKSDLGLTPVNDGKIIRISIPPLTEDRRKDLAKVAKKYAEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D LKK +     SED     + D+QK+TD+ I   D    +K+KEIM  
Sbjct: 125 VAIRNIRRDANDALKKKKNDKAISEDDQHKGQEDVQKLTDAYIAKADDALAKKEKEIMEI 184


>gi|261419452|ref|YP_003253134.1| ribosome recycling factor [Geobacillus sp. Y412MC61]
 gi|261375909|gb|ACX78652.1| ribosome recycling factor [Geobacillus sp. Y412MC61]
          Length = 186

 Score =  250 bits (639), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  K++M   +    +++ ++R GR +  +L+ V V+ YG   P+NQ+A+++V E R+L
Sbjct: 7   IQQAKEKMDKAVQAFTRELASIRAGRANAGLLEKVTVDYYGVPTPINQLASISVPEARLL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I  S+LGL P  +G V+R+ +P  TEERR  L K+   Y+E +K
Sbjct: 67  VIQPYDKSAIKEMEKAILASDLGLTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+G+ +ED + S  +++QK+TD  I  ID+  +EK+KE+M  
Sbjct: 127 VAVRNIRRDANDELKKLEKNGEITEDELRSYTDEVQKLTDDHIAKIDAITKEKEKEVMEV 186


>gi|316933924|ref|YP_004108906.1| ribosome recycling factor [Rhodopseudomonas palustris DX-1]
 gi|315601638|gb|ADU44173.1| ribosome recycling factor [Rhodopseudomonas palustris DX-1]
          Length = 186

 Score =  250 bits (639), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 97/186 (52%), Positives = 132/186 (70%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+  +K RM      LK ++  LRTGR S SML+ V+V+AYGSH+PLNQVA V+V
Sbjct: 1   MSDKFDINELKRRMQGAAQSLKHELGGLRTGRASASMLEPVQVDAYGSHMPLNQVATVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR++ V VWDK MV +VE+GI +SNLGL+P  EGQV+R+ +PE  EERR  LVKVAH 
Sbjct: 61  PEPRLISVQVWDKSMVKAVEKGIVDSNLGLSPATEGQVIRLRIPELNEERRKELVKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++VR++RRDG+D +KK  K+ + SED    L+ ++QK TD+TI  ID     K+
Sbjct: 121 YAEAARVAVRHVRRDGLDTIKKLEKAHEISEDDQKRLDTEVQKATDATIGEIDQLLANKE 180

Query: 181 KEIMHF 186
           KEI+  
Sbjct: 181 KEILTV 186


>gi|258511403|ref|YP_003184837.1| ribosome recycling factor [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478129|gb|ACV58448.1| ribosome recycling factor [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 187

 Score =  250 bits (639), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 82/180 (45%), Positives = 126/180 (70%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +QN+++RM   I  L+++  T+R GR +PSMLD V VE YG+ +P+NQVA+VT  EPR+L
Sbjct: 8   IQNLQERMDKAIQNLRREFATVRAGRAAPSMLDHVMVEYYGAQMPVNQVASVTSPEPRLL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S WDK M++ +E+ I +S+LGLNP  +G V+R+ +P  TE+RR  LVK     AE+++
Sbjct: 68  VISPWDKSMLSEIEKAIQKSDLGLNPANDGNVIRLTIPALTEQRRQELVKQVRKMAEEAR 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRDG + +KK  K+G  SED V  L + +Q++TD  I  +D   E+K+K++   
Sbjct: 128 VAIRNIRRDGNEEIKKLEKAGDLSEDDVRRLMDRVQQLTDKAIAQVDRLLEDKEKDVTQV 187


>gi|121533727|ref|ZP_01665554.1| ribosome recycling factor [Thermosinus carboxydivorans Nor1]
 gi|121307718|gb|EAX48633.1| ribosome recycling factor [Thermosinus carboxydivorans Nor1]
          Length = 186

 Score =  250 bits (639), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 76/176 (43%), Positives = 119/176 (67%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M   +  L+K+  +LR GR +PS+LD V V+ YG   P+NQVAN++V EPR++V+  
Sbjct: 11  EEKMKKALEVLRKEFASLRAGRATPSLLDKVTVDYYGMPSPINQVANISVPEPRLIVIQP 70

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K M+A +E+ I +S+LGL P  +G V+R+ +P+ T++RR  LVKV H  AE++++++R
Sbjct: 71  WEKSMLAPIEKAILKSDLGLTPTNDGNVIRLSIPQLTQQRRSELVKVVHKKAEEARVAIR 130

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRD  D +KK  K  + SED     + D+QK+TD  IK +D     K+KEIM  
Sbjct: 131 NLRRDANDAIKKLEKEKQVSEDEAKKAQEDMQKLTDKYIKEVDQVMAAKEKEIMEV 186


>gi|304404282|ref|ZP_07385944.1| ribosome recycling factor [Paenibacillus curdlanolyticus YK9]
 gi|304347260|gb|EFM13092.1| ribosome recycling factor [Paenibacillus curdlanolyticus YK9]
          Length = 184

 Score =  249 bits (638), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 118/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M Q I  ++ ++RM   I  LK+D+ TLR GR +P++LD ++VE YG+  P+NQ+AN+  
Sbjct: 1   MPQAIK-KDAEERMEKAIGALKRDLATLRAGRATPALLDRIQVEYYGAMTPVNQLANINT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L++  WDK  +A++E+ I +S+LGL P  +G  +R+ +P  TEERR  LVK+   
Sbjct: 60  PDSRTLLLQPWDKSSLAAIEKAIMKSDLGLTPSNDGSTIRLSIPALTEERRSELVKLTKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + E++KI+VRNIRRD  D +KK  K    SED     ++DIQK TD  +  +D     K+
Sbjct: 120 FGEEAKIAVRNIRRDANDDIKKLEKDA-ISEDESRRHQDDIQKTTDRFVGEVDKVLAAKE 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEV 184


>gi|297717876|gb|ADI50081.1| ribosome recycling factor [Candidatus Odyssella thessalonicensis
           L13]
          Length = 185

 Score =  249 bits (638), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 91/180 (50%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +     RM   I  L ++   LRTGR S ++LD +KV+AYGS  P+NQV N+ V E RML
Sbjct: 6   ITEAARRMDGAIEVLNREFSGLRTGRASVNLLDAIKVDAYGSPTPINQVGNINVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWD  M+ +VE+ I ++ LGLNP V+GQ++RIP+P   EERR  L KVA  YAE++K
Sbjct: 66  TVQVWDNSMIKAVEKAIRDAGLGLNPAVDGQLIRIPLPPLNEERRQELTKVAAKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ISVRN+RRD M+ LKKS K G+ SED    L +++QK+TD+ IK ID     K+K+IM  
Sbjct: 126 ISVRNVRRDIMESLKKSEKDGEISEDEHRRLSDEVQKVTDAHIKKIDEILASKQKDIMQV 185


>gi|222085860|ref|YP_002544391.1| ribosome recycling factor [Agrobacterium radiobacter K84]
 gi|254809484|sp|B9JEX3|RRF_AGRRK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|221723308|gb|ACM26464.1| ribosome recycling factor [Agrobacterium radiobacter K84]
          Length = 186

 Score =  249 bits (638), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 110/186 (59%), Positives = 140/186 (75%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++  DL+ +K RM   I+  K D+ +LRTGR S ++LD V +EAYGS +PLNQVAN+TV
Sbjct: 1   MSEGTDLKELKRRMDGAIAAFKSDIASLRTGRASANILDPVTIEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +VERGI ESNLGLNPI++GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLSVSVWDKSMVGAVERGIRESNLGLNPIIDGQNLRIPLPELNEERRRSLVKVAHE 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEK+K+++R++RRDGMD LKK+ K G   +D   SL   +QK+TD TI +ID    +K+
Sbjct: 121 YAEKAKVAIRHVRRDGMDGLKKAEKDGDIGQDEGRSLSERVQKMTDETISDIDRLLVDKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|73541567|ref|YP_296087.1| ribosome recycling factor [Ralstonia eutropha JMP134]
 gi|123624825|sp|Q470E0|RRF_RALEJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|72118980|gb|AAZ61243.1| ribosome recycling factor [Ralstonia eutropha JMP134]
          Length = 186

 Score =  249 bits (638), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+ + + R + 
Sbjct: 8   KSVEQKMQKSIEAFKADLAKVRTGRAHVGLLDHVQVDYYGSMVPISQVANIGLGDARTIT 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I + +LGLNP   G+V+R+P+P  TEERR  L KV    AE +KI
Sbjct: 68  VQPWEKKMVGAVEKAIRDCDLGLNPATMGEVIRVPMPPLTEERRKELTKVVKGEAEGAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  +  KK  K    SED     ++D+QK+TD  +  ID    EK+KEIM  
Sbjct: 128 AVRNLRRDANEQFKKLVKDKAISEDDERRGQDDVQKLTDKYVAEIDKMVAEKEKEIMTV 186


>gi|22297803|ref|NP_681050.1| ribosome recycling factor [Thermosynechococcus elongatus BP-1]
 gi|34222747|sp|Q8DM64|RRF_THEEB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|22293980|dbj|BAC07812.1| ribosome releasing factor [Thermosynechococcus elongatus BP-1]
          Length = 182

 Score =  249 bits (638), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++++RM  ++   + D  ++RTGR + ++LD V V+ YG+  PL  +ANV+  +   +
Sbjct: 3   LADVEERMQKSVEATQHDFNSIRTGRANAALLDRVMVDYYGTETPLRSLANVSTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  +AS+E+ I  S+LGL P  +G  +R+ +P  T ERR  LVK A   AE  K
Sbjct: 63  LIQPYDRSTLASIEKAIQLSDLGLTPNNDGSSVRLNIPPLTTERRKELVKTAAKIAEGGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +DH+KK+ K+G+ +ED V  L+  +QK+TD  I  ID+   EK+K+IM  
Sbjct: 123 VAIRNIRRDAIDHIKKAGKAGELTEDEVKDLQEKVQKLTDKYIGKIDALLAEKEKDIMTV 182


>gi|89054949|ref|YP_510400.1| ribosome recycling factor [Jannaschia sp. CCS1]
 gi|88864498|gb|ABD55375.1| ribosome recycling factor [Jannaschia sp. CCS1]
          Length = 243

 Score =  249 bits (638), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 85/185 (45%), Positives = 123/185 (66%), Gaps = 4/185 (2%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++D  +++ RM   I+ L+ +  +LRTGR S SML+ V V+AYG+  P+NQV  V V 
Sbjct: 63  DFMLDTDDLERRMEGAIASLRTEFASLRTGRASASMLEPVMVDAYGAMTPINQVGTVNVP 122

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPRM+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y
Sbjct: 123 EPRMVTVNVWDKGLVNKVEKAIRESGLGINPQMNGTIIMLPIPELNEERRRELTKVAGTY 182

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE ++++VRN+RRDGMD +KK+      SED     E  +Q++TD+ IK +D   E K++
Sbjct: 183 AENARVAVRNVRRDGMDQIKKA----DTSEDDAKFWEGAVQELTDTFIKRVDDQLETKQE 238

Query: 182 EIMHF 186
           EIM  
Sbjct: 239 EIMQV 243


>gi|94496939|ref|ZP_01303513.1| ribosome recycling factor [Sphingomonas sp. SKA58]
 gi|94423615|gb|EAT08642.1| ribosome recycling factor [Sphingomonas sp. SKA58]
          Length = 185

 Score =  249 bits (638), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 94/180 (52%), Positives = 125/180 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  +++ RM   +  LK D+  LRTGR +  +LD V VE YG+H+PLNQVA V+  EPR
Sbjct: 4   YDKADLERRMAGAVESLKGDLTGLRTGRANVQLLDPVTVEVYGAHMPLNQVATVSAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V VWDK  V   ++ I  + LGLNPIV+GQ LR+P+P+ TEERR  L K+A  YAE 
Sbjct: 64  MLSVQVWDKSNVGPCDKAIRSAGLGLNPIVDGQTLRLPIPDLTEERRKELAKLASKYAEG 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMD+LK   K G+ SED    LE ++QK+TDSTI +IDS    K+KEI+
Sbjct: 124 ARVAVRNVRRDGMDNLKADEKKGEISEDERKRLETEVQKLTDSTIADIDSVTSAKEKEIL 183


>gi|30021912|ref|NP_833543.1| ribosome recycling factor [Bacillus cereus ATCC 14579]
 gi|47569102|ref|ZP_00239791.1| ribosome recycling factor [Bacillus cereus G9241]
 gi|206972656|ref|ZP_03233597.1| ribosome recycling factor [Bacillus cereus AH1134]
 gi|218234587|ref|YP_002368625.1| ribosome recycling factor [Bacillus cereus B4264]
 gi|228922578|ref|ZP_04085878.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228954100|ref|ZP_04116129.1| Ribosome-recycling factor [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228960040|ref|ZP_04121704.1| Ribosome-recycling factor [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228986967|ref|ZP_04147093.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229047510|ref|ZP_04193100.1| Ribosome-recycling factor [Bacillus cereus AH676]
 gi|229071322|ref|ZP_04204545.1| Ribosome-recycling factor [Bacillus cereus F65185]
 gi|229081079|ref|ZP_04213589.1| Ribosome-recycling factor [Bacillus cereus Rock4-2]
 gi|229111295|ref|ZP_04240848.1| Ribosome-recycling factor [Bacillus cereus Rock1-15]
 gi|229129100|ref|ZP_04258073.1| Ribosome-recycling factor [Bacillus cereus BDRD-Cer4]
 gi|229146395|ref|ZP_04274766.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST24]
 gi|229152023|ref|ZP_04280218.1| Ribosome-recycling factor [Bacillus cereus m1550]
 gi|229157400|ref|ZP_04285478.1| Ribosome-recycling factor [Bacillus cereus ATCC 4342]
 gi|229180100|ref|ZP_04307444.1| Ribosome-recycling factor [Bacillus cereus 172560W]
 gi|229191993|ref|ZP_04318963.1| Ribosome-recycling factor [Bacillus cereus ATCC 10876]
 gi|296504319|ref|YP_003666019.1| ribosome recycling factor [Bacillus thuringiensis BMB171]
 gi|33301535|sp|Q812X4|RRF_BACCR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703253|sp|B7HDU7|RRF_BACC4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29897468|gb|AAP10744.1| Ribosome Recycling Factor (RRF) [Bacillus cereus ATCC 14579]
 gi|47554264|gb|EAL12626.1| ribosome recycling factor [Bacillus cereus G9241]
 gi|206732413|gb|EDZ49594.1| ribosome recycling factor [Bacillus cereus AH1134]
 gi|218162544|gb|ACK62536.1| ribosome recycling factor [Bacillus cereus B4264]
 gi|228591544|gb|EEK49393.1| Ribosome-recycling factor [Bacillus cereus ATCC 10876]
 gi|228603309|gb|EEK60786.1| Ribosome-recycling factor [Bacillus cereus 172560W]
 gi|228626127|gb|EEK82876.1| Ribosome-recycling factor [Bacillus cereus ATCC 4342]
 gi|228631372|gb|EEK88006.1| Ribosome-recycling factor [Bacillus cereus m1550]
 gi|228637028|gb|EEK93487.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST24]
 gi|228654337|gb|EEL10202.1| Ribosome-recycling factor [Bacillus cereus BDRD-Cer4]
 gi|228672071|gb|EEL27362.1| Ribosome-recycling factor [Bacillus cereus Rock1-15]
 gi|228702123|gb|EEL54599.1| Ribosome-recycling factor [Bacillus cereus Rock4-2]
 gi|228711776|gb|EEL63728.1| Ribosome-recycling factor [Bacillus cereus F65185]
 gi|228723757|gb|EEL75112.1| Ribosome-recycling factor [Bacillus cereus AH676]
 gi|228772745|gb|EEM21185.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228799556|gb|EEM46509.1| Ribosome-recycling factor [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228805666|gb|EEM52256.1| Ribosome-recycling factor [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228837007|gb|EEM82348.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296325371|gb|ADH08299.1| ribosome recycling factor [Bacillus thuringiensis BMB171]
          Length = 185

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR + S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRANASVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+KEIM  
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV 185


>gi|49478397|ref|YP_037885.1| ribosome recycling factor [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52141664|ref|YP_085165.1| ribosome recycling factor [Bacillus cereus E33L]
 gi|118479046|ref|YP_896197.1| ribosome recycling factor [Bacillus thuringiensis str. Al Hakam]
 gi|165872626|ref|ZP_02217257.1| ribosome recycling factor [Bacillus anthracis str. A0488]
 gi|167635820|ref|ZP_02394129.1| ribosome recycling factor [Bacillus anthracis str. A0442]
 gi|167639854|ref|ZP_02398123.1| ribosome recycling factor [Bacillus anthracis str. A0193]
 gi|170687902|ref|ZP_02879116.1| ribosome recycling factor [Bacillus anthracis str. A0465]
 gi|177652096|ref|ZP_02934642.1| ribosome recycling factor [Bacillus anthracis str. A0174]
 gi|190568475|ref|ZP_03021382.1| ribosome recycling factor [Bacillus anthracis Tsiankovskii-I]
 gi|196036913|ref|ZP_03104297.1| ribosome recycling factor [Bacillus cereus W]
 gi|196042138|ref|ZP_03109421.1| ribosome recycling factor [Bacillus cereus NVH0597-99]
 gi|196044581|ref|ZP_03111816.1| ribosome recycling factor [Bacillus cereus 03BB108]
 gi|218904952|ref|YP_002452786.1| ribosome recycling factor [Bacillus cereus AH820]
 gi|225865805|ref|YP_002751183.1| ribosome recycling factor [Bacillus cereus 03BB102]
 gi|227813268|ref|YP_002813277.1| ribosome recycling factor [Bacillus anthracis str. CDC 684]
 gi|228916461|ref|ZP_04080027.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228928872|ref|ZP_04091904.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935138|ref|ZP_04097965.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228947543|ref|ZP_04109833.1| Ribosome-recycling factor [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123337|ref|ZP_04252541.1| Ribosome-recycling factor [Bacillus cereus 95/8201]
 gi|229162760|ref|ZP_04290717.1| Ribosome-recycling factor [Bacillus cereus R309803]
 gi|229186063|ref|ZP_04313233.1| Ribosome-recycling factor [Bacillus cereus BGSC 6E1]
 gi|254683469|ref|ZP_05147329.1| ribosome recycling factor [Bacillus anthracis str. CNEVA-9066]
 gi|254721990|ref|ZP_05183779.1| ribosome recycling factor [Bacillus anthracis str. A1055]
 gi|254735862|ref|ZP_05193568.1| ribosome recycling factor [Bacillus anthracis str. Western North
           America USA6153]
 gi|254739612|ref|ZP_05197306.1| ribosome recycling factor [Bacillus anthracis str. Kruger B]
 gi|254756015|ref|ZP_05208046.1| ribosome recycling factor [Bacillus anthracis str. Vollum]
 gi|254759324|ref|ZP_05211349.1| ribosome recycling factor [Bacillus anthracis str. Australia 94]
 gi|301055314|ref|YP_003793525.1| ribosome releasing factor [Bacillus anthracis CI]
 gi|60390240|sp|Q636K2|RRF_BACCZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390255|sp|Q6HEZ1|RRF_BACHK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230411|sp|A0RHJ7|RRF_BACAH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703251|sp|B7JJA2|RRF_BACC0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809490|sp|C3L7A3|RRF_BACAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809491|sp|C1EP48|RRF_BACC3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|49329953|gb|AAT60599.1| ribosome recycling factor [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|51975133|gb|AAU16683.1| ribosome recycling factor [Bacillus cereus E33L]
 gi|118418271|gb|ABK86690.1| ribosome recycling factor [Bacillus thuringiensis str. Al Hakam]
 gi|164711658|gb|EDR17204.1| ribosome recycling factor [Bacillus anthracis str. A0488]
 gi|167512255|gb|EDR87632.1| ribosome recycling factor [Bacillus anthracis str. A0193]
 gi|167528777|gb|EDR91535.1| ribosome recycling factor [Bacillus anthracis str. A0442]
 gi|170668218|gb|EDT18967.1| ribosome recycling factor [Bacillus anthracis str. A0465]
 gi|172082465|gb|EDT67530.1| ribosome recycling factor [Bacillus anthracis str. A0174]
 gi|190560479|gb|EDV14457.1| ribosome recycling factor [Bacillus anthracis Tsiankovskii-I]
 gi|195990468|gb|EDX54452.1| ribosome recycling factor [Bacillus cereus W]
 gi|196024616|gb|EDX63288.1| ribosome recycling factor [Bacillus cereus 03BB108]
 gi|196026990|gb|EDX65614.1| ribosome recycling factor [Bacillus cereus NVH0597-99]
 gi|218535243|gb|ACK87641.1| ribosome recycling factor [Bacillus cereus AH820]
 gi|225788805|gb|ACO29022.1| ribosome recycling factor [Bacillus cereus 03BB102]
 gi|227004475|gb|ACP14218.1| ribosome recycling factor [Bacillus anthracis str. CDC 684]
 gi|228597482|gb|EEK55132.1| Ribosome-recycling factor [Bacillus cereus BGSC 6E1]
 gi|228620642|gb|EEK77511.1| Ribosome-recycling factor [Bacillus cereus R309803]
 gi|228660113|gb|EEL15749.1| Ribosome-recycling factor [Bacillus cereus 95/8201]
 gi|228812063|gb|EEM58394.1| Ribosome-recycling factor [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228824503|gb|EEM70308.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830679|gb|EEM76284.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228843040|gb|EEM88122.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|300377483|gb|ADK06387.1| ribosome releasing factor [Bacillus cereus biovar anthracis str.
           CI]
          Length = 185

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+KEIM  
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV 185


>gi|317129173|ref|YP_004095455.1| ribosome recycling factor [Bacillus cellulosilyticus DSM 2522]
 gi|315474121|gb|ADU30724.1| ribosome recycling factor [Bacillus cellulosilyticus DSM 2522]
          Length = 185

 Score =  249 bits (638), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +M  ++   +K++ T+R GR +PS+LD V+VE YG   PLNQ+A++ V E RML
Sbjct: 6   LKQAEVKMSKSVEAFRKELATIRAGRANPSLLDKVQVEYYGMMTPLNQLASIAVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK  +  +ER I +++LGL+P  +G ++RI +P  TEERR  LVK+   Y+E++K
Sbjct: 66  TIQPFDKSSLQDIERAIQKADLGLSPTNDGNIIRIAIPALTEERRKELVKLVGRYSEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K G+ +ED +   ++++QK+TD  IK+ID   + K++EIM  
Sbjct: 126 VAVRNIRRDANDELKKLEKDGELTEDDLRWNQDEVQKLTDGVIKDIDEIAKSKEQEIMEV 185


>gi|283835234|ref|ZP_06354975.1| ribosome recycling factor [Citrobacter youngae ATCC 29220]
 gi|291068945|gb|EFE07054.1| ribosome recycling factor [Citrobacter youngae ATCC 29220]
          Length = 185

 Score =  249 bits (637), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMDKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE +++
Sbjct: 67  INVFDRSMGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEGARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++++QK+TD+ IK +D+   EK+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKDKEISEDDDRRSQDEVQKLTDAAIKKVDAALAEKETELMQF 185


>gi|39935984|ref|NP_948260.1| ribosome recycling factor [Rhodopseudomonas palustris CGA009]
 gi|192291637|ref|YP_001992242.1| ribosome recycling factor [Rhodopseudomonas palustris TIE-1]
 gi|47116997|sp|P61309|RRF_RHOPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229564263|sp|B3Q7K1|RRF_RHOPT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39649838|emb|CAE28360.1| ribosome releasing factor [Rhodopseudomonas palustris CGA009]
 gi|192285386|gb|ACF01767.1| ribosome recycling factor [Rhodopseudomonas palustris TIE-1]
          Length = 186

 Score =  249 bits (637), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 96/186 (51%), Positives = 131/186 (70%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+  +K RM      LK ++  LRTGR S SML+ V+V+AYGSH+PLNQVA V+V
Sbjct: 1   MSDKFDVNELKRRMQGAAQSLKHELGGLRTGRASASMLEPVQVDAYGSHMPLNQVATVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR++ V VWDK MV +VE+GI +SNLGL+P  EGQV+R+ +PE  EERR  LVKVAH 
Sbjct: 61  PEPRLISVQVWDKSMVKAVEKGIVDSNLGLSPATEGQVIRLRIPELNEERRKELVKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++VR++RRDG+D +KK  K+ + SED    L+ ++QK TD+ I  ID     K+
Sbjct: 121 YAEAARVAVRHVRRDGLDTIKKLEKAHEISEDDQKRLDQEVQKATDAAIAEIDQLLANKE 180

Query: 181 KEIMHF 186
           KEI+  
Sbjct: 181 KEILTV 186


>gi|311068174|ref|YP_003973097.1| ribosome recycling factor [Bacillus atrophaeus 1942]
 gi|310868691|gb|ADP32166.1| ribosome recycling factor [Bacillus atrophaeus 1942]
          Length = 185

 Score =  249 bits (637), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+RM   ++  ++++ T+R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTETKERMEKAVAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  LVK+   YAE++K
Sbjct: 66  VITPYDKTAIGDIEKAILKADLGVTPTSDGNIIRIAIPALTEERRKELVKLVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM  
Sbjct: 126 VAVRNVRRDANDDLKKLEKNGDITEDELRTSNEDVQKLTDEYVSKIDSVTKDKEKEIMEV 185


>gi|75764985|ref|ZP_00744310.1| Ribosome Recycling Factor (RRF) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218898977|ref|YP_002447388.1| ribosome recycling factor [Bacillus cereus G9842]
 gi|228902327|ref|ZP_04066484.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 4222]
 gi|228909648|ref|ZP_04073471.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 200]
 gi|228940912|ref|ZP_04103471.1| Ribosome-recycling factor [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973841|ref|ZP_04134417.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980430|ref|ZP_04140740.1| Ribosome-recycling factor [Bacillus thuringiensis Bt407]
 gi|229031454|ref|ZP_04187454.1| Ribosome-recycling factor [Bacillus cereus AH1271]
 gi|229098293|ref|ZP_04229240.1| Ribosome-recycling factor [Bacillus cereus Rock3-29]
 gi|229104386|ref|ZP_04235055.1| Ribosome-recycling factor [Bacillus cereus Rock3-28]
 gi|229117310|ref|ZP_04246688.1| Ribosome-recycling factor [Bacillus cereus Rock1-3]
 gi|226703252|sp|B7IUI3|RRF_BACC2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|74487527|gb|EAO51418.1| Ribosome Recycling Factor (RRF) [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218541328|gb|ACK93722.1| ribosome recycling factor [Bacillus cereus G9842]
 gi|228666210|gb|EEL21674.1| Ribosome-recycling factor [Bacillus cereus Rock1-3]
 gi|228679084|gb|EEL33292.1| Ribosome-recycling factor [Bacillus cereus Rock3-28]
 gi|228685191|gb|EEL39122.1| Ribosome-recycling factor [Bacillus cereus Rock3-29]
 gi|228729743|gb|EEL80723.1| Ribosome-recycling factor [Bacillus cereus AH1271]
 gi|228779250|gb|EEM27507.1| Ribosome-recycling factor [Bacillus thuringiensis Bt407]
 gi|228785866|gb|EEM33869.1| Ribosome-recycling factor [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818748|gb|EEM64814.1| Ribosome-recycling factor [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228849937|gb|EEM94768.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 200]
 gi|228857296|gb|EEN01799.1| Ribosome-recycling factor [Bacillus thuringiensis IBL 4222]
 gi|326941592|gb|AEA17488.1| ribosome recycling factor [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 185

 Score =  249 bits (637), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRASSSVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+KEIM  
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV 185


>gi|307129823|ref|YP_003881839.1| ribosome recycling factor [Dickeya dadantii 3937]
 gi|306527352|gb|ADM97282.1| ribosome recycling factor [Dickeya dadantii 3937]
          Length = 185

 Score =  249 bits (637), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YGS  PL Q+AN+ V + R L 
Sbjct: 7   KDAETRMDKCVEAFKNQISKVRTGRASPSLLDGIHVEYYGSATPLRQLANIVVEDTRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+KV    AE+S++
Sbjct: 67  VTVFDRTLGPAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKVVRGEAEQSRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D LK   K    SED     ++D+QK+TDS IK ID+   EK+KE+M F
Sbjct: 127 AVRNVRRDANDKLKAQLKEKTISEDDERRSQDDVQKLTDSFIKKIDAVLAEKEKELMDF 185


>gi|229019019|ref|ZP_04175860.1| Ribosome-recycling factor [Bacillus cereus AH1273]
 gi|229025264|ref|ZP_04181684.1| Ribosome-recycling factor [Bacillus cereus AH1272]
 gi|228736017|gb|EEL86592.1| Ribosome-recycling factor [Bacillus cereus AH1272]
 gi|228742259|gb|EEL92418.1| Ribosome-recycling factor [Bacillus cereus AH1273]
          Length = 185

 Score =  249 bits (637), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRASSSVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRDG D LKK  K+G  +ED +     DIQK TD  I  +D   + K+KEIM  
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGDITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV 185


>gi|298291819|ref|YP_003693758.1| ribosome recycling factor [Starkeya novella DSM 506]
 gi|296928330|gb|ADH89139.1| ribosome recycling factor [Starkeya novella DSM 506]
          Length = 187

 Score =  249 bits (637), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 99/182 (54%), Positives = 135/182 (74%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID+ ++K RM   I+ LK+++  LRTGR S S+L+ ++V+AYGSH+PLNQVA+V V EPR
Sbjct: 6   IDIADLKRRMQGAIAVLKQELSGLRTGRASASLLEPIQVDAYGSHMPLNQVASVNVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWD+ MVA+VE+ I ESNLGLNP  EGQVLR+ +PE T++RR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDRGMVAAVEKAIRESNLGLNPQTEGQVLRVRIPELTQDRRQELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++SVR++RRDG+D LKK+ K G+ S D +  L + +QK TD +I  ID     K+KEI+
Sbjct: 126 ARVSVRHVRRDGLDALKKAEKDGEMSSDDLDRLADQVQKATDQSITEIDQTLSTKEKEIL 185

Query: 185 HF 186
             
Sbjct: 186 AV 187


>gi|319940997|ref|ZP_08015334.1| ribosome-recycling factor [Sutterella wadsworthensis 3_1_45B]
 gi|319805570|gb|EFW02365.1| ribosome-recycling factor [Sutterella wadsworthensis 3_1_45B]
          Length = 186

 Score =  249 bits (637), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +MG T+  L+ D   +RTGR S  +LD ++V+ YG   PLNQVA V V +   L
Sbjct: 7   IQQTQHKMGVTVEKLRDDFTRIRTGRASTGLLDKIRVDYYGCPTPLNQVAQVGVGDAHTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  W+K MV   E+ I +S+LGLNP   G  +R+P+P  TEERR  L KV   + E++K
Sbjct: 67  TVQPWEKNMVKVCEKAIRDSDLGLNPATSGDTIRVPLPPLTEERRRELTKVVKGFGEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD    L++  K  + SED     E +IQK+TD  +  ID    EK KEIM  
Sbjct: 127 VAVRNLRRDANTQLERLEKDKEISEDDQRRYETEIQKLTDRFVAEIDKVIAEKDKEIMTV 186


>gi|237729478|ref|ZP_04559959.1| ribosome releasing factor [Citrobacter sp. 30_2]
 gi|226909207|gb|EEH95125.1| ribosome releasing factor [Citrobacter sp. 30_2]
          Length = 185

 Score =  249 bits (636), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMDKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE +++
Sbjct: 67  INVFDRSMGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEGARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   EK+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKEKEISEDDDRRSQDDVQKLTDAAIKKVDAALAEKEAELMQF 185


>gi|149183486|ref|ZP_01861915.1| ribosome recycling factor [Bacillus sp. SG-1]
 gi|148848798|gb|EDL63019.1| ribosome recycling factor [Bacillus sp. SG-1]
          Length = 185

 Score =  249 bits (636), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N K+RM   I    +++ ++R GR + S+LD + V+ YG+  P+NQ+A ++V E RML
Sbjct: 6   MSNTKERMTKAIQTFTRELASIRAGRANASLLDKITVDYYGAPTPVNQLAGISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +S+LG+ P  +G +LRI +P+ TEERR  LVK+    +E +K
Sbjct: 66  VIQPYDKSALGDIEKAIMKSDLGITPSSDGNILRIVIPQLTEERRKDLVKLVKKESEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D  KK  K+G  +ED +    +D+QK+TD  I  IDS  ++K+KEI+  
Sbjct: 126 VAIRNIRRDANDEFKKLEKNGDITEDDLRGYSDDVQKLTDDHINQIDSIAKDKEKEILEV 185


>gi|114704873|ref|ZP_01437781.1| ribosome releasing factor [Fulvimarina pelagi HTCC2506]
 gi|114539658|gb|EAU42778.1| ribosome releasing factor [Fulvimarina pelagi HTCC2506]
          Length = 185

 Score =  249 bits (636), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 93/182 (51%), Positives = 125/182 (68%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  ++K RM   I   K D+  LRTGR SP++LD V V+AYG+ +P+NQVAN++V EPR
Sbjct: 4   FDFDDLKRRMDGAIQSFKGDLAGLRTGRASPNLLDPVMVDAYGTQMPVNQVANISVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ++ V+VWDK+MV  VER I ESNLGLNP+ +G  LRIP+PE  E+RR  LVKVA  YAE+
Sbjct: 64  LVSVTVWDKQMVGKVERAIRESNLGLNPVTDGTTLRIPLPELNEQRRKELVKVAQQYAEQ 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDGMD LKK  K G   +D    +   +QK+TD  +  ID     K++EIM
Sbjct: 124 AKVAVRHVRRDGMDSLKKMEKDGDIGQDDNRQMSERVQKMTDDAVSEIDRTLATKEQEIM 183

Query: 185 HF 186
             
Sbjct: 184 QV 185


>gi|113868031|ref|YP_726520.1| ribosome recycling factor [Ralstonia eutropha H16]
 gi|123329181|sp|Q0KA19|RRF_RALEH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|113526807|emb|CAJ93152.1| Ribosome Recycling Factor (RRF) [Ralstonia eutropha H16]
          Length = 186

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVA V + + R + 
Sbjct: 8   KSVEQKMQKSIEAFKADLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVAAVGLADARTIT 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I + +LGLNP   G+V+R+P+P  TEERR  L KV    AE +K+
Sbjct: 68  VQPWEKKMVGAVEKAIRDCDLGLNPATMGEVIRVPMPALTEERRKELTKVVKGEAEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  +  KK  K    SED     ++++QK+TD  +  ID    EK+KEIM  
Sbjct: 128 AVRNLRRDANEQFKKLVKDKTISEDDERRGQDEVQKLTDKYVAEIDKMVAEKEKEIMTV 186


>gi|229092864|ref|ZP_04223998.1| Ribosome-recycling factor [Bacillus cereus Rock3-42]
 gi|228690486|gb|EEL44269.1| Ribosome-recycling factor [Bacillus cereus Rock3-42]
          Length = 185

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+KEIM  
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV 185


>gi|30263828|ref|NP_846205.1| ribosome recycling factor [Bacillus anthracis str. Ames]
 gi|47529252|ref|YP_020601.1| ribosome recycling factor [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186674|ref|YP_029926.1| ribosome recycling factor [Bacillus anthracis str. Sterne]
 gi|65321151|ref|ZP_00394110.1| COG0233: Ribosome recycling factor [Bacillus anthracis str. A2012]
 gi|170706904|ref|ZP_02897362.1| ribosome recycling factor [Bacillus anthracis str. A0389]
 gi|229604313|ref|YP_002868062.1| ribosome recycling factor [Bacillus anthracis str. A0248]
 gi|33301536|sp|Q81WL1|RRF_BACAN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809489|sp|C3P5M6|RRF_BACAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|30258472|gb|AAP27691.1| ribosome recycling factor [Bacillus anthracis str. Ames]
 gi|47504400|gb|AAT33076.1| ribosome recycling factor [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180601|gb|AAT55977.1| ribosome recycling factor [Bacillus anthracis str. Sterne]
 gi|170128322|gb|EDS97191.1| ribosome recycling factor [Bacillus anthracis str. A0389]
 gi|229268721|gb|ACQ50358.1| ribosome recycling factor [Bacillus anthracis str. A0248]
          Length = 185

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKFSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K+KEIM  
Sbjct: 126 VAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV 185


>gi|118590008|ref|ZP_01547412.1| ribosome releasing factor [Stappia aggregata IAM 12614]
 gi|118437505|gb|EAV44142.1| ribosome releasing factor [Stappia aggregata IAM 12614]
          Length = 187

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 96/184 (52%), Positives = 133/184 (72%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + +DL ++K RM   +S LK +   LRTGR S SM+D + VEAYG  +P+NQVA V+V E
Sbjct: 4   EGVDLDDLKRRMQGALSVLKTEFAGLRTGRASSSMMDPITVEAYGQSMPINQVATVSVPE 63

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           PRML V VWDK MV++VE+ I ESNLGLNP+V+G +LR+P+PE  +ERR  L+KVAH YA
Sbjct: 64  PRMLAVQVWDKSMVSAVEKAIRESNLGLNPVVDGMLLRLPIPELNQERRQELIKVAHKYA 123

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E++K+S+R++RRDGMD  KK+ K G  S+D      +++QK+TD  I  +DS  E+K++E
Sbjct: 124 EQAKVSIRHVRRDGMDAAKKAEKDGDISQDDSRVASDEVQKLTDQMIAEVDSMLEKKEQE 183

Query: 183 IMHF 186
           I   
Sbjct: 184 ISQV 187


>gi|94310380|ref|YP_583590.1| ribosome recycling factor [Cupriavidus metallidurans CH34]
 gi|166231214|sp|Q1LNF5|RRF_RALME RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|93354232|gb|ABF08321.1| ribosome recycling factor [Cupriavidus metallidurans CH34]
          Length = 186

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVA V++ + R + 
Sbjct: 8   KSVEQKMQKSIEAFKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVAAVSLADARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I + +LGLNP   G V+R+P+P  TEERR  L KV    AE +K+
Sbjct: 68  VQPWEKKMVQAVEKAIRDGDLGLNPATMGDVIRVPMPPLTEERRRELTKVVKGEAEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  +  KK  K    SED     ++++QK+TD  +  ID    EK+KEIM  
Sbjct: 128 AVRNLRRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDKFVAEIDKLVAEKEKEIMTV 186


>gi|303325662|ref|ZP_07356105.1| ribosome recycling factor [Desulfovibrio sp. 3_1_syn3]
 gi|302863578|gb|EFL86509.1| ribosome recycling factor [Desulfovibrio sp. 3_1_syn3]
          Length = 186

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRM   ++ L +D   LRTGR S +++D +K + YG+  P++Q+A+V V + R L
Sbjct: 7   LLDAEDRMEKALAALDRDFAKLRTGRASTALVDGIKADYYGTPTPVSQMASVAVPDSRTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  +A+VE+ I +S+LGL P+ +G+++RI +P  TEERR  LVKVA  Y+E++K
Sbjct: 67  TIQPWDKGGIAAVEKAILKSDLGLTPVNDGKIIRIVIPPLTEERRKDLVKVARKYSEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K  + +ED +    +D+QK+TD  + ++D     K+KEIM  
Sbjct: 127 VAVRNVRRDANDGLKKLEKDKEITEDELKKAVDDVQKLTDKFVGDVDKKCAGKEKEIMDI 186


>gi|295399842|ref|ZP_06809823.1| ribosome recycling factor [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111646|ref|YP_003989962.1| ribosome recycling factor [Geobacillus sp. Y4.1MC1]
 gi|294978245|gb|EFG53842.1| ribosome recycling factor [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216747|gb|ADP75351.1| ribosome recycling factor [Geobacillus sp. Y4.1MC1]
          Length = 185

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K++M   +    +++ T+R GR +PS+L+ + V+ YG+  P+ Q+A+++  E R+L
Sbjct: 6   INTAKEKMDKAVQAFTRELATIRAGRANPSLLEKITVDYYGAPTPIIQLASISAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E+ I  S+LGL P  +G V+RI +P  TEERR  LVK+   Y+E +K
Sbjct: 66  VIQPYDKSVIKDIEKAILSSDLGLTPSNDGSVIRIAIPPLTEERRRELVKLVKKYSEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+G+ +ED +    +DIQK+TD+ I  ID+  +EK+KE+M  
Sbjct: 126 VAVRNIRRDANDELKKLEKNGEITEDELRGYIDDIQKLTDNHIAKIDTITKEKEKEVMEV 185


>gi|238754804|ref|ZP_04616155.1| Ribosome-recycling factor [Yersinia ruckeri ATCC 29473]
 gi|238706964|gb|EEP99330.1| Ribosome-recycling factor [Yersinia ruckeri ATCC 29473]
          Length = 185

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RMG  +   +  +  +RTGR SPS+LD ++V+ YGS  PL Q+ANV V + R L 
Sbjct: 7   KDAEVRMGKCVDAFQNHISKIRTGRASPSILDGIQVDYYGSATPLRQLANVVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KVA   AE+ ++
Sbjct: 67  ITVFDRSLNAAVEKAIMSSDLGLNPSSAGSVIRVPLPPLTEERRKDLIKVARGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K    SED     ++D+QK+TDS IK ID+   EK+ E+M+F
Sbjct: 127 SVRNVRRDTNDKVKALLKDKAISEDDDRRCQDDVQKMTDSYIKKIDTALAEKEAELMNF 185


>gi|323137307|ref|ZP_08072385.1| ribosome recycling factor [Methylocystis sp. ATCC 49242]
 gi|322397294|gb|EFX99817.1| ribosome recycling factor [Methylocystis sp. ATCC 49242]
          Length = 186

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 96/186 (51%), Positives = 126/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +  DL ++K RM   I+ LK +   LRTGR S S+L+ V V+AYG H PLNQVA ++V
Sbjct: 1   MTEKFDLADLKRRMQGAIATLKHEFGGLRTGRASASLLEPVHVDAYGQHSPLNQVATISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML V VWDK +V +V++ I E+NLGL P VEGQ+LRI +PE  E+RR  LVKVAH 
Sbjct: 61  PEPRMLSVQVWDKALVIAVDKAIREANLGLQPTVEGQMLRIRMPELNEQRRKELVKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++VR++RRDG+D LKK  K     ED     E ++QK TD  +K ID+    K+
Sbjct: 121 YAEDARVAVRHVRRDGLDILKKLLKDHAIPEDDEKRHETEVQKATDEAVKEIDAALAAKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|163760886|ref|ZP_02167965.1| ribosome recycling factor [Hoeflea phototrophica DFL-43]
 gi|162281930|gb|EDQ32222.1| ribosome recycling factor [Hoeflea phototrophica DFL-43]
          Length = 186

 Score =  249 bits (636), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 107/186 (57%), Positives = 136/186 (73%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D + +K RM   I+  K D+ +LRTGR S ++LD V VEAYGS VPLNQVANVTV
Sbjct: 1   MSDAADSKELKRRMDGAINAFKSDIASLRTGRASANVLDPVMVEAYGSKVPLNQVANVTV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK+MV +V+RGI E+NLGLNPIV+GQ LRIP+PE  EERR +LVKV+H 
Sbjct: 61  PEPRMLGVSVWDKQMVGAVDRGIREANLGLNPIVDGQNLRIPLPELNEERRKSLVKVSHT 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE +++++RN+RRDGMD LKK+ K G  S+D      + +QK+TD  I  ID    +K+
Sbjct: 121 YAENARVAIRNVRRDGMDTLKKAEKDGDISQDDSRRESDQVQKMTDEMISEIDRLLVDKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|323697430|ref|ZP_08109342.1| ribosome recycling factor [Desulfovibrio sp. ND132]
 gi|323457362|gb|EGB13227.1| ribosome recycling factor [Desulfovibrio desulfuricans ND132]
          Length = 184

 Score =  248 bits (635), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K RM   I+ L KD   LRTGR + +++D + V+ YG+  P++Q+++V+V + + +
Sbjct: 5   LDDGKKRMSGAITALDKDFSKLRTGRATTALVDSILVDYYGTPTPISQLSSVSVPDSKTI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK    SVE+ I  S+LGLNP+ +G+++RI +P  TEERR  LVKVA  Y E +K
Sbjct: 65  TIQPWDKGAFGSVEKAIQTSDLGLNPVNDGKIIRISIPPLTEERRKELVKVAKKYTEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RRD  D LKK  K  + SED     E D+QK+TD  +K  D     K+KEI+  
Sbjct: 125 IAIRNVRRDMNDALKKMEKDKEISEDDQRRSEADVQKMTDDYVKKADEVMAAKEKEILEI 184


>gi|317051930|ref|YP_004113046.1| ribosome recycling factor [Desulfurispirillum indicum S5]
 gi|316947014|gb|ADU66490.1| ribosome recycling factor [Desulfurispirillum indicum S5]
          Length = 185

 Score =  248 bits (635), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
             +K++M   +   +KD  TLRTGR S ++LD VKV+ YG+  PL Q  +VT+ +   + 
Sbjct: 7   SEVKEKMQKAVEATRKDFSTLRTGRASTALLDNVKVDYYGTPTPLKQAGSVTIPDATTIS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  W+  M+ ++E+ I  +NLG+ P  +GQ++RI +P  TE+RR  L +    +AE  +I
Sbjct: 67  IQPWEPHMLPAIEKAIVAANLGVTPSNDGQMIRISIPPLTEDRRKELTRQVKKFAEDGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRR G D +K   K    +ED     + ++QKITD  +K ID   E K+KE+M  
Sbjct: 127 AVRNIRRFGNDSVKALEKDKLITEDEAKRAQEEVQKITDGFVKTIDEMAEAKEKELMTV 185


>gi|220934336|ref|YP_002513235.1| ribosome recycling factor [Thioalkalivibrio sp. HL-EbGR7]
 gi|254809540|sp|B8GQ53|RRF_THISH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219995646|gb|ACL72248.1| ribosome recycling factor [Thioalkalivibrio sp. HL-EbGR7]
          Length = 185

 Score =  248 bits (635), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 84/179 (46%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ K RMG +I  L+ ++  +RTGR   S+LD V VE YGS VP++QVANV V + R L 
Sbjct: 7   KDAKARMGKSIESLRNELAKIRTGRAHTSLLDHVMVEYYGSDVPISQVANVNVEDARTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K MV+ VE+ I  S+LGLNP   G V+R+P+P  TEERR  LVKV    AE +++
Sbjct: 67  VTPWEKTMVSKVEKAIMTSDLGLNPSSMGTVIRVPMPALTEERRRDLVKVVRGEAENARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  + LK   K  + SED     +++IQK+TDS I+ +D    EK+KE+M  
Sbjct: 127 AIRNIRRDANNALKALVKGKEISEDDERRAQDEIQKLTDSHIEEVDKVLAEKEKELMEV 185


>gi|23010622|ref|ZP_00051247.1| COG0233: Ribosome recycling factor [Magnetospirillum
           magnetotacticum MS-1]
          Length = 187

 Score =  248 bits (635), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 95/182 (52%), Positives = 129/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL +IK RM   +S L KD+ +LRTGR +PS+LD ++VEAYG+ +P+ QVA V+V EPR
Sbjct: 6   FDLGDIKRRMQGAVSSLSKDLGSLRTGRATPSLLDPIQVEAYGASMPMAQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L +SVWD+ MV +VE+ I ES+LGLNP+ EGQ +R+ +PE  E+RR  +VKVAH YAE+
Sbjct: 66  LLSISVWDRSMVTNVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYAEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K G  SED       D+QK TD  I  ID     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDILKKLEKDGAISEDDEKRQAGDVQKATDDAIAEIDGVLASKEKEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|37524676|ref|NP_928020.1| ribosome releasing factor [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|39932036|sp|Q7N8P4|RRF_PHOLL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|36784101|emb|CAE12970.1| ribosome releasing factor [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 185

 Score =  248 bits (635), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + VE YG+  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSVEALKNQISKVRTGRASPSLLDGIIVEYYGAPTPLRQLANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  ++E+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV  + AE+ ++
Sbjct: 67  ITVFDRTMTPAIEKAIMASDLGLNPSSAGTTIRVPLPPLTEERRKDLIKVVRSEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD  D +K   K  + SED     ++DIQK+TD+ IK +D    +K++E+M F
Sbjct: 127 SVRNIRRDANDKIKALLKDKEISEDDERRAQDDIQKLTDNFIKKVDEALTKKEEELMEF 185


>gi|78045140|ref|YP_360604.1| ribosome recycling factor [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123575922|sp|Q3AB80|RRF_CARHZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|77997255|gb|ABB16154.1| ribosome recycling factor [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 185

 Score =  248 bits (635), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +D M   I  LKK+  T+R GR +P++L+ V VE YG+ +P+NQ+A ++  EPR+L
Sbjct: 6   LKEAQDHMQKAIEVLKKEFATMRVGRATPALLEKVVVEYYGTQMPVNQLATISAPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  + ++E+ I +S+LG+ P  +G V+R+ +P  T+ERR  LVKVA   AE+++
Sbjct: 66  VIQPWDKGALGAIEKAILKSDLGITPTNDGSVIRLAIPPLTQERRQELVKVARKKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D +K   K    SED     ++++QK+TD  IK +D   + K+ EI+  
Sbjct: 126 VAIRNIRRDANDRIKDLEKDKVISEDEGKRGQDEVQKLTDKFIKTVDELLKAKEDEILSI 185


>gi|228998600|ref|ZP_04158187.1| Ribosome-recycling factor [Bacillus mycoides Rock3-17]
 gi|229006100|ref|ZP_04163788.1| Ribosome-recycling factor [Bacillus mycoides Rock1-4]
 gi|228755176|gb|EEM04533.1| Ribosome-recycling factor [Bacillus mycoides Rock1-4]
 gi|228761068|gb|EEM10027.1| Ribosome-recycling factor [Bacillus mycoides Rock3-17]
          Length = 185

 Score =  248 bits (635), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++M   ++   +++ ++R GR S S LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKAANEKMEKAVAAYSRELASVRAGRASASALDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVK    YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRDLVKTVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED +     DIQK TD  I  +D   + K+KEIM  
Sbjct: 126 VAVRNVRRDANDDLKKLEKAGDITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV 185


>gi|322382357|ref|ZP_08056264.1| ribosome recycling factor-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153710|gb|EFX46085.1| ribosome recycling factor-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 180

 Score =  248 bits (635), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/178 (43%), Positives = 119/178 (66%), Gaps = 1/178 (0%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N +DRM   ++ L+K++++LR GR +P++LD V+VE YG+  PLNQ+AN+ V +PR L++
Sbjct: 4   NAEDRMQKAVAALQKELVSLRAGRATPALLDRVQVEYYGAMTPLNQLANINVPDPRTLLI 63

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WDK  + ++E+ I +S LGL P  +G ++R+ +P  TEERRL LVK+   Y E +K++
Sbjct: 64  QPWDKSSLGAIEKAILKSELGLTPTSDGTMIRLTIPPLTEERRLELVKMTKKYGEDAKVA 123

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRRD  + +KK  K+ + SED     ++DIQK TD  I  +D     K+KEIM  
Sbjct: 124 IRNIRRDSNESIKKMEKT-EISEDESRRHQDDIQKSTDKYIAEVDKVLAAKEKEIMEV 180


>gi|317153887|ref|YP_004121935.1| ribosome recycling factor [Desulfovibrio aespoeensis Aspo-2]
 gi|316944138|gb|ADU63189.1| ribosome recycling factor [Desulfovibrio aespoeensis Aspo-2]
          Length = 184

 Score =  248 bits (635), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K RM   IS L+KD   LRTGR + +++D + V+ YG+  P+NQ+++V+V + + +
Sbjct: 5   LNDGKKRMAGAISALEKDFSKLRTGRATTALVDTIVVDYYGTPTPINQLSSVSVPDAKSI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+    +VE+ I  S+LGLNP+ +G+++RI +P  TEERR  LVKVA  Y E+ K
Sbjct: 65  TIQPWDRGAFGAVEKAIQTSDLGLNPVNDGKIIRISIPPLTEERRKELVKVAKKYTEECK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RRD  D LKK  K    SED +   E D+QK+TD  +K  +     K+KEI+  
Sbjct: 125 IAIRNVRRDLNDSLKKLEKDKAISEDELKKGEADVQKLTDDFVKQSEGVLVAKEKEILEI 184


>gi|146341066|ref|YP_001206114.1| ribosome recycling factor [Bradyrhizobium sp. ORS278]
 gi|190360236|sp|A4YVG3|RRF_BRASO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146193872|emb|CAL77889.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Bradyrhizobium sp. ORS278]
          Length = 187

 Score =  248 bits (635), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 96/182 (52%), Positives = 128/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL  +K RM      LK ++  LRTGR S SM++ V+VEAYGSH+PLNQ+A V+V EPR
Sbjct: 6   FDLNELKRRMQGATQALKHELGGLRTGRASASMVEPVQVEAYGSHMPLNQLATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWD+ MV +VE+ I +SNLGL+P  EGQV+R+ +PE  +ERR  LVKVAH YAE+
Sbjct: 66  LLSVQVWDRSMVKAVEKAIVDSNLGLSPATEGQVIRLRIPELNQERRKELVKVAHKYAEQ 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K+ + SED    L  D+QK TDS I  ID     K+KEI+
Sbjct: 126 ARVAVRHVRRDGLDTLKKLEKNHEMSEDDQERLAGDVQKATDSVISEIDQLLAAKEKEIL 185

Query: 185 HF 186
             
Sbjct: 186 TV 187


>gi|254448744|ref|ZP_05062201.1| ribosome recycling factor [gamma proteobacterium HTCC5015]
 gi|198261585|gb|EDY85873.1| ribosome recycling factor [gamma proteobacterium HTCC5015]
          Length = 185

 Score =  248 bits (635), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L+ D+  +RTGR  PS+L+ ++VE YG+  P+ QVAN+TV + R LV
Sbjct: 7   KDAESRMKKSLESLQGDLTRIRTGRAHPSLLEHIQVEYYGAKTPIKQVANITVEDARTLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K+MV ++E+ I ES+LGLNP   G V+RIP+P  TEERR   VK+     E+ K+
Sbjct: 67  VTPWEKDMVQTIEKAIMESDLGLNPTSAGTVMRIPLPPLTEERRKEFVKLVRQEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD     K   K  + SED     E  IQK+TD  +  +D     K++E+M  
Sbjct: 127 AIRNIRRDANGDFKDLLKEKEISEDEQRRAEEVIQKLTDKYVAEVDGLLAAKEQELMEV 185


>gi|228992552|ref|ZP_04152479.1| Ribosome-recycling factor [Bacillus pseudomycoides DSM 12442]
 gi|228767186|gb|EEM15822.1| Ribosome-recycling factor [Bacillus pseudomycoides DSM 12442]
          Length = 185

 Score =  248 bits (634), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++M   ++   +++ ++R GR S S LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKATNEKMEKAVAAYSRELASVRAGRASASALDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVK    YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRDLVKTVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED +     DIQK TD  I  +D   + K+KEIM  
Sbjct: 126 VAVRNVRRDANDDLKKLEKAGDITEDDLRGYTEDIQKETDKYIAKVDEITKNKEKEIMEV 185


>gi|116620031|ref|YP_822187.1| ribosome recycling factor [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223193|gb|ABJ81902.1| ribosome recycling factor [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 201

 Score =  248 bits (634), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            N+K RM   +S L+ +M ++RTGR + S+LD ++V+ YG+  PLNQVAN+ V EP ++ 
Sbjct: 22  ANLKTRMEKAVSDLQHEMASIRTGRATLSLLDHIRVDYYGTPTPLNQVANLHVPEPNLIT 81

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD   + ++E+ I  S+LGLNP  +G+V+R+P+P  TEERR  LVK  HA AE  ++
Sbjct: 82  IQPWDVSQIGTIEKSIRTSDLGLNPANDGKVIRLPIPPLTEERRKELVKKLHAAAEHHRV 141

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRDG + +KK  K  K +ED      ++IQK+TD  +  +D+  + K+KEIM  
Sbjct: 142 AVRNIRRDGNEAVKKLSKDKKITEDDDKKAHDEIQKLTDLYMGKVDTAAKTKEKEIMEI 200


>gi|194289789|ref|YP_002005696.1| ribosome recycling factor [Cupriavidus taiwanensis LMG 19424]
 gi|238692748|sp|B3R2B4|RRF_CUPTR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|193223624|emb|CAQ69631.1| ribosome releasing factor [Cupriavidus taiwanensis LMG 19424]
          Length = 186

 Score =  248 bits (634), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVA + + + R + 
Sbjct: 8   KSAEQKMQKSIEAFKADLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVAAIGLADARTIT 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV++VE+ I + +LGLNP   G+V+R+P+P  TEERR  L KV    AE +K+
Sbjct: 68  VQPWEKKMVSAVEKAIRDCDLGLNPATMGEVIRVPMPALTEERRKELTKVVKGEAEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  +  KK  K    SED     ++++QK+TD  +  ID    EK+KEIM  
Sbjct: 128 AVRNLRRDANEQFKKLVKDKTISEDEERRGQDEVQKLTDKYVAEIDRMVAEKEKEIMTV 186


>gi|86357537|ref|YP_469429.1| ribosome recycling factor [Rhizobium etli CFN 42]
 gi|190891610|ref|YP_001978152.1| ribosome recycling factor protein [Rhizobium etli CIAT 652]
 gi|123512098|sp|Q2K8Y4|RRF_RHIEC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238692538|sp|B3PYP5|RRF_RHIE6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|86281639|gb|ABC90702.1| ribosome recycling factor protein [Rhizobium etli CFN 42]
 gi|190696889|gb|ACE90974.1| ribosome recycling factor protein [Rhizobium etli CIAT 652]
 gi|327189225|gb|EGE56404.1| ribosome recycling factor [Rhizobium etli CNPAF512]
          Length = 186

 Score =  248 bits (634), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 112/186 (60%), Positives = 140/186 (75%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ID++ +K RM   +S  K D+ +LRTGR S ++LD V +EAYGS VPLNQVAN+TV
Sbjct: 1   MSEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRVPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV++VERGI ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLTVSVWDKSMVSAVERGIRESNLGLNPIVDGQSLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK+++R++RRDGMD LKK+ K G   +D   +    +QK+TD TI  ID    EK+
Sbjct: 121 YAEKSKVAIRHVRRDGMDGLKKAEKDGVIGQDESRAQSERVQKMTDETISEIDRLLGEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|284008517|emb|CBA75037.1| ribosome recycling factor [Arsenophonus nasoniae]
          Length = 185

 Score =  248 bits (634), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR SPS+LD + VE YG+  PL Q+AN+T  + R L 
Sbjct: 7   KDAQERMEKSVEALKSQISKVRTGRASPSLLDGIVVEYYGAATPLRQLANITAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +  +VE+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  ITVFDRTLTPAVEKAIMASDLGLNPSSAGTIIRVPLPPLTEERRKDLIKVVRNDAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN RRD  D +K   K  + SED     +++IQK+TD+ IK +D   E+K+KE+M F
Sbjct: 127 SVRNARRDANDKIKALLKDKEISEDDERRAQDEIQKLTDNFIKKVDEALEQKEKELMEF 185


>gi|284051585|ref|ZP_06381795.1| ribosome recycling factor [Arthrospira platensis str. Paraca]
 gi|291566938|dbj|BAI89210.1| ribosome recycling factor [Arthrospira platensis NIES-39]
          Length = 182

 Score =  248 bits (634), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++++ M   +    +   T+RTGR + S+LD + VE YGS  PL  +A+++  +   +
Sbjct: 3   LADVENLMKKALESTGRSFNTIRTGRANASLLDRITVEYYGSPTPLKSLASISTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  + ++E+ I  S++GL P  +G V+R+ +P  TE RR   VK+A  YAE+ +
Sbjct: 63  TIQPFDRNSLNNIEKAISMSDVGLTPNNDGSVVRLNIPPLTEARRQEFVKLAGKYAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN+RRD +D ++K  KSG  SED    L++ IQK+TD     +D   E K+K+IM  
Sbjct: 123 VSVRNVRRDAIDSVRKQEKSGDISEDESRDLQDQIQKLTDKYTAKVDELLEAKEKDIMTV 182


>gi|254780776|ref|YP_003065189.1| ribosome recycling factor [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|170785427|gb|ACB37708.1| ribosome recycling factor [Candidatus Liberibacter asiaticus]
 gi|254040453|gb|ACT57249.1| ribosome recycling factor [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 186

 Score =  248 bits (633), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 186/186 (100%), Positives = 186/186 (100%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV
Sbjct: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA
Sbjct: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK
Sbjct: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180

Query: 181 KEIMHF 186
           KEIMHF
Sbjct: 181 KEIMHF 186


>gi|154686069|ref|YP_001421230.1| ribosome recycling factor [Bacillus amyloliquefaciens FZB42]
 gi|166230410|sp|A7Z4S3|RRF_BACA2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|154351920|gb|ABS73999.1| Frr [Bacillus amyloliquefaciens FZB42]
          Length = 185

 Score =  248 bits (633), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+RM   ++   +++ ++R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTQTKERMEKAVAAYSRELASVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  LVKV   YAE++K
Sbjct: 66  VVTPYDKTAIGDIEKAILKADLGVTPTSDGTIIRIAIPALTEERRKELVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM  
Sbjct: 126 VAVRNVRRDSNDDLKKLEKNGDITEDELRASSEDVQKLTDEYVSKIDSVTKDKEKEIMEV 185


>gi|163941562|ref|YP_001646446.1| ribosome recycling factor [Bacillus weihenstephanensis KBAB4]
 gi|229013007|ref|ZP_04170172.1| Ribosome-recycling factor [Bacillus mycoides DSM 2048]
 gi|229061427|ref|ZP_04198772.1| Ribosome-recycling factor [Bacillus cereus AH603]
 gi|229134631|ref|ZP_04263441.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST196]
 gi|229168563|ref|ZP_04296286.1| Ribosome-recycling factor [Bacillus cereus AH621]
 gi|229174490|ref|ZP_04302022.1| Ribosome-recycling factor [Bacillus cereus MM3]
 gi|229564221|sp|A9VT62|RRF_BACWK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|163863759|gb|ABY44818.1| ribosome recycling factor [Bacillus weihenstephanensis KBAB4]
 gi|228609050|gb|EEK66340.1| Ribosome-recycling factor [Bacillus cereus MM3]
 gi|228614969|gb|EEK72071.1| Ribosome-recycling factor [Bacillus cereus AH621]
 gi|228648892|gb|EEL04917.1| Ribosome-recycling factor [Bacillus cereus BDRD-ST196]
 gi|228717850|gb|EEL69498.1| Ribosome-recycling factor [Bacillus cereus AH603]
 gi|228748261|gb|EEL98121.1| Ribosome-recycling factor [Bacillus mycoides DSM 2048]
          Length = 185

 Score =  248 bits (633), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSSNEKMEKAVAAYSRELATVRAGRASSSVLDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED +     DIQK TD  I  +D   + K+KEIM  
Sbjct: 126 VAVRNVRRDSNDDLKKLEKAGDITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV 185


>gi|15799854|ref|NP_285866.1| ribosome recycling factor [Escherichia coli O157:H7 EDL933]
 gi|15829428|ref|NP_308201.1| ribosome recycling factor [Escherichia coli O157:H7 str. Sakai]
 gi|16128165|ref|NP_414714.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
           MG1655]
 gi|24111607|ref|NP_706117.1| ribosome recycling factor [Shigella flexneri 2a str. 301]
 gi|26246119|ref|NP_752158.1| ribosome recycling factor [Escherichia coli CFT073]
 gi|30061729|ref|NP_835900.1| ribosome recycling factor [Shigella flexneri 2a str. 2457T]
 gi|74310792|ref|YP_309211.1| ribosome recycling factor [Shigella sonnei Ss046]
 gi|82542771|ref|YP_406718.1| ribosome recycling factor [Shigella boydii Sb227]
 gi|82775562|ref|YP_401909.1| ribosome recycling factor [Shigella dysenteriae Sd197]
 gi|89107052|ref|AP_000832.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
           W3110]
 gi|91209242|ref|YP_539228.1| ribosome recycling factor [Escherichia coli UTI89]
 gi|110640391|ref|YP_668119.1| ribosome recycling factor [Escherichia coli 536]
 gi|110804224|ref|YP_687744.1| ribosome recycling factor [Shigella flexneri 5 str. 8401]
 gi|157155211|ref|YP_001461341.1| ribosome recycling factor [Escherichia coli E24377A]
 gi|157159637|ref|YP_001456955.1| ribosome recycling factor [Escherichia coli HS]
 gi|168751391|ref|ZP_02776413.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4113]
 gi|168755785|ref|ZP_02780792.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4401]
 gi|168764321|ref|ZP_02789328.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4501]
 gi|168770354|ref|ZP_02795361.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4486]
 gi|168777009|ref|ZP_02802016.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4196]
 gi|168782064|ref|ZP_02807071.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4076]
 gi|168789281|ref|ZP_02814288.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC869]
 gi|170021475|ref|YP_001726429.1| ribosome recycling factor [Escherichia coli ATCC 8739]
 gi|170079808|ref|YP_001729128.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170683322|ref|YP_001742300.1| ribosome recycling factor [Escherichia coli SMS-3-5]
 gi|187731916|ref|YP_001878974.1| ribosome recycling factor [Shigella boydii CDC 3083-94]
 gi|188496088|ref|ZP_03003358.1| ribosome releasing factor [Escherichia coli 53638]
 gi|191166361|ref|ZP_03028193.1| ribosome releasing factor [Escherichia coli B7A]
 gi|191172803|ref|ZP_03034340.1| ribosome releasing factor [Escherichia coli F11]
 gi|193063223|ref|ZP_03044314.1| ribosome releasing factor [Escherichia coli E22]
 gi|193067565|ref|ZP_03048532.1| ribosome releasing factor [Escherichia coli E110019]
 gi|194428316|ref|ZP_03060858.1| ribosome releasing factor [Escherichia coli B171]
 gi|194433418|ref|ZP_03065697.1| ribosome releasing factor [Shigella dysenteriae 1012]
 gi|194439153|ref|ZP_03071235.1| ribosome releasing factor [Escherichia coli 101-1]
 gi|195938146|ref|ZP_03083528.1| ribosome recycling factor [Escherichia coli O157:H7 str. EC4024]
 gi|208809164|ref|ZP_03251501.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4206]
 gi|208812775|ref|ZP_03254104.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4045]
 gi|208819126|ref|ZP_03259446.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4042]
 gi|209398036|ref|YP_002268780.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4115]
 gi|209917362|ref|YP_002291446.1| ribosome recycling factor [Escherichia coli SE11]
 gi|215485333|ref|YP_002327764.1| ribosome recycling factor [Escherichia coli O127:H6 str. E2348/69]
 gi|217325138|ref|ZP_03441222.1| ribosome releasing factor [Escherichia coli O157:H7 str. TW14588]
 gi|218547627|ref|YP_002381418.1| ribosome recycling factor [Escherichia fergusonii ATCC 35469]
 gi|218552752|ref|YP_002385665.1| ribosome recycling factor [Escherichia coli IAI1]
 gi|218557113|ref|YP_002390026.1| ribosome recycling factor [Escherichia coli S88]
 gi|218688047|ref|YP_002396259.1| ribosome recycling factor [Escherichia coli ED1a]
 gi|218693637|ref|YP_002401304.1| ribosome recycling factor [Escherichia coli 55989]
 gi|218698592|ref|YP_002406221.1| ribosome recycling factor [Escherichia coli IAI39]
 gi|218703426|ref|YP_002410945.1| ribosome recycling factor [Escherichia coli UMN026]
 gi|227884915|ref|ZP_04002720.1| ribosome recycling factor [Escherichia coli 83972]
 gi|237704331|ref|ZP_04534812.1| ribosome-recycling factor [Escherichia sp. 3_2_53FAA]
 gi|238899570|ref|YP_002925366.1| ribosome recycling factor [Escherichia coli BW2952]
 gi|253774801|ref|YP_003037632.1| ribosome recycling factor [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254037591|ref|ZP_04871668.1| ribosome-recycling factor [Escherichia sp. 1_1_43]
 gi|254160291|ref|YP_003043399.1| ribosome recycling factor [Escherichia coli B str. REL606]
 gi|254791305|ref|YP_003076142.1| ribosome recycling factor [Escherichia coli O157:H7 str. TW14359]
 gi|256021604|ref|ZP_05435469.1| ribosome recycling factor [Shigella sp. D9]
 gi|256025484|ref|ZP_05439349.1| ribosome recycling factor [Escherichia sp. 4_1_40B]
 gi|260842404|ref|YP_003220182.1| ribosome recycling factor [Escherichia coli O103:H2 str. 12009]
 gi|260853382|ref|YP_003227273.1| ribosome recycling factor [Escherichia coli O26:H11 str. 11368]
 gi|260866321|ref|YP_003232723.1| ribosome recycling factor [Escherichia coli O111:H- str. 11128]
 gi|261226926|ref|ZP_05941207.1| ribosome recycling factor [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255330|ref|ZP_05947863.1| ribosome recycling factor [Escherichia coli O157:H7 str. FRIK966]
 gi|291280994|ref|YP_003497812.1| Ribosome recycling factor [Escherichia coli O55:H7 str. CB9615]
 gi|293403241|ref|ZP_06647338.1| frr [Escherichia coli FVEC1412]
 gi|293408264|ref|ZP_06652104.1| ribosome recycling factor [Escherichia coli B354]
 gi|293418057|ref|ZP_06660679.1| ribosome recycling factor [Escherichia coli B185]
 gi|293476829|ref|ZP_06665237.1| ribosome recycling factor [Escherichia coli B088]
 gi|297521925|ref|ZP_06940311.1| ribosome recycling factor [Escherichia coli OP50]
 gi|298378777|ref|ZP_06988661.1| ribosome-recycling factor [Escherichia coli FVEC1302]
 gi|300816212|ref|ZP_07096435.1| ribosome recycling factor [Escherichia coli MS 107-1]
 gi|300824105|ref|ZP_07104225.1| ribosome recycling factor [Escherichia coli MS 119-7]
 gi|300900790|ref|ZP_07118934.1| ribosome recycling factor [Escherichia coli MS 198-1]
 gi|300901991|ref|ZP_07120018.1| ribosome recycling factor [Escherichia coli MS 84-1]
 gi|300920146|ref|ZP_07136597.1| ribosome recycling factor [Escherichia coli MS 115-1]
 gi|300923036|ref|ZP_07139103.1| ribosome recycling factor [Escherichia coli MS 182-1]
 gi|300932126|ref|ZP_07147411.1| ribosome recycling factor [Escherichia coli MS 187-1]
 gi|300938579|ref|ZP_07153312.1| ribosome recycling factor [Escherichia coli MS 21-1]
 gi|300949796|ref|ZP_07163770.1| ribosome recycling factor [Escherichia coli MS 116-1]
 gi|300956055|ref|ZP_07168380.1| ribosome recycling factor [Escherichia coli MS 175-1]
 gi|300984932|ref|ZP_07177197.1| ribosome recycling factor [Escherichia coli MS 200-1]
 gi|300993607|ref|ZP_07180463.1| ribosome recycling factor [Escherichia coli MS 45-1]
 gi|301025948|ref|ZP_07189432.1| ribosome recycling factor [Escherichia coli MS 69-1]
 gi|301028665|ref|ZP_07191886.1| ribosome recycling factor [Escherichia coli MS 196-1]
 gi|301049915|ref|ZP_07196840.1| ribosome recycling factor [Escherichia coli MS 185-1]
 gi|301305308|ref|ZP_07211404.1| ribosome recycling factor [Escherichia coli MS 124-1]
 gi|301330030|ref|ZP_07222714.1| ribosome recycling factor [Escherichia coli MS 78-1]
 gi|301646495|ref|ZP_07246370.1| ribosome recycling factor [Escherichia coli MS 146-1]
 gi|306815228|ref|ZP_07449377.1| ribosome recycling factor [Escherichia coli NC101]
 gi|307136772|ref|ZP_07496128.1| ribosome recycling factor [Escherichia coli H736]
 gi|307311381|ref|ZP_07591023.1| ribosome recycling factor [Escherichia coli W]
 gi|309796349|ref|ZP_07690758.1| ribosome recycling factor [Escherichia coli MS 145-7]
 gi|312966308|ref|ZP_07780534.1| ribosome recycling factor [Escherichia coli 2362-75]
 gi|312970272|ref|ZP_07784454.1| ribosome recycling factor [Escherichia coli 1827-70]
 gi|331640626|ref|ZP_08341774.1| ribosome recycling factor [Escherichia coli H736]
 gi|331645315|ref|ZP_08346426.1| ribosome recycling factor [Escherichia coli M605]
 gi|331651077|ref|ZP_08352105.1| ribosome recycling factor [Escherichia coli M718]
 gi|331661243|ref|ZP_08362175.1| ribosome recycling factor [Escherichia coli TA206]
 gi|331661546|ref|ZP_08362470.1| ribosome recycling factor [Escherichia coli TA143]
 gi|331666413|ref|ZP_08367294.1| ribosome recycling factor [Escherichia coli TA271]
 gi|331671678|ref|ZP_08372476.1| ribosome recycling factor [Escherichia coli TA280]
 gi|331680751|ref|ZP_08381410.1| ribosome recycling factor [Escherichia coli H591]
 gi|331681557|ref|ZP_08382194.1| ribosome recycling factor [Escherichia coli H299]
 gi|332282846|ref|ZP_08395259.1| ribosome-recycling factor [Shigella sp. D9]
 gi|67472290|sp|P0A805|RRF_ECOLI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|67472291|sp|P0A806|RRF_ECOL6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|67472292|sp|P0A807|RRF_ECO57 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|67472293|sp|P0A808|RRF_SHIFL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122424957|sp|Q1RG17|RRF_ECOUT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123147265|sp|Q0T837|RRF_SHIF8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123148410|sp|Q0TLG1|RRF_ECOL5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123560535|sp|Q325W8|RRF_SHIBS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123563477|sp|Q32JT7|RRF_SHIDS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123618027|sp|Q3Z5I6|RRF_SHISS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166991554|sp|A7ZHR2|RRF_ECO24 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166991555|sp|A7ZWB8|RRF_ECOHS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044054|sp|B1IQG9|RRF_ECOLC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703260|sp|B7MBF3|RRF_ECO45 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703261|sp|B7NID4|RRF_ECO7I RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703262|sp|B7M1X4|RRF_ECO8A RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703263|sp|B7N839|RRF_ECOLU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703264|sp|B1LGX4|RRF_ECOSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703265|sp|B7LWB1|RRF_ESCF3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749928|sp|B5Z0F1|RRF_ECO5E RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749929|sp|B6HZE6|RRF_ECOSE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229564224|sp|B1XD41|RRF_ECODH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689500|sp|B2U315|RRF_SHIB3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809510|sp|B7UIL7|RRF_ECO27 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809511|sp|B7LGN3|RRF_ECO55 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809512|sp|B7MP32|RRF_ECO81 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|259494540|sp|C4ZRR4|RRF_ECOBW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|13399451|pdb|1EK8|A Chain A, Crystal Structure Of The Ribosome Recycling Factor (Rrf)
           From Escherichia Coli
 gi|71042411|pdb|1ZN0|A Chain A, Coordinates Of Rrf And Ef-G Fitted Into Cryo-Em Map Of The
           50s Subunit Bound With Both Ef-G (Gdpnp) And Rrf
 gi|71042414|pdb|1ZN1|A Chain A, Coordinates Of Rrf Fitted Into Cryo-Em Map Of The 70s
           Post- Termination Complex
 gi|169404635|pdb|2RDO|8 Chain 8, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound
 gi|12512897|gb|AAG54474.1|AE005193_4 ribosome releasing factor [Escherichia coli O157:H7 str. EDL933]
 gi|26106516|gb|AAN78702.1|AE016755_202 Ribosome recycling factor [Escherichia coli CFT073]
 gi|147771|gb|AAA24607.1| ribosome releasing factor (gtg start codon) [Escherichia coli]
 gi|806329|dbj|BAA02599.1| ribosome releasing factor (FRR) [Escherichia coli]
 gi|1552749|gb|AAB08601.1| ribosome release factor [Escherichia coli]
 gi|1786368|gb|AAC73283.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13359630|dbj|BAB33597.1| ribosome releasing factor [Escherichia coli O157:H7 str. Sakai]
 gi|21239027|dbj|BAB96748.1| ribosome recycling factor [Escherichia coli str. K12 substr. W3110]
 gi|24050375|gb|AAN41824.1| ribosome releasing factor [Shigella flexneri 2a str. 301]
 gi|30039971|gb|AAP15705.1| ribosome releasing factor [Shigella flexneri 2a str. 2457T]
 gi|73854269|gb|AAZ86976.1| ribosome releasing factor [Shigella sonnei Ss046]
 gi|81239710|gb|ABB60420.1| ribosome releasing factor [Shigella dysenteriae Sd197]
 gi|81244182|gb|ABB64890.1| ribosome releasing factor [Shigella boydii Sb227]
 gi|91070816|gb|ABE05697.1| ribosome recycling factor [Escherichia coli UTI89]
 gi|110341983|gb|ABG68220.1| ribosome recycling factor [Escherichia coli 536]
 gi|110613772|gb|ABF02439.1| ribosome releasing factor [Shigella flexneri 5 str. 8401]
 gi|157065317|gb|ABV04572.1| ribosome releasing factor [Escherichia coli HS]
 gi|157077241|gb|ABV16949.1| ribosome recycling factor [Escherichia coli E24377A]
 gi|169756403|gb|ACA79102.1| ribosome recycling factor [Escherichia coli ATCC 8739]
 gi|169887643|gb|ACB01350.1| ribosome recycling factor [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170521040|gb|ACB19218.1| ribosome releasing factor [Escherichia coli SMS-3-5]
 gi|187428908|gb|ACD08182.1| ribosome releasing factor [Shigella boydii CDC 3083-94]
 gi|187767671|gb|EDU31515.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4196]
 gi|188014582|gb|EDU52704.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4113]
 gi|188491287|gb|EDU66390.1| ribosome releasing factor [Escherichia coli 53638]
 gi|189000476|gb|EDU69462.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4076]
 gi|189357057|gb|EDU75476.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4401]
 gi|189360728|gb|EDU79147.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4486]
 gi|189365640|gb|EDU84056.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4501]
 gi|189371119|gb|EDU89535.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC869]
 gi|190903612|gb|EDV63329.1| ribosome releasing factor [Escherichia coli B7A]
 gi|190906953|gb|EDV66555.1| ribosome releasing factor [Escherichia coli F11]
 gi|192931131|gb|EDV83734.1| ribosome releasing factor [Escherichia coli E22]
 gi|192958977|gb|EDV89413.1| ribosome releasing factor [Escherichia coli E110019]
 gi|194413691|gb|EDX29971.1| ribosome releasing factor [Escherichia coli B171]
 gi|194418346|gb|EDX34436.1| ribosome releasing factor [Shigella dysenteriae 1012]
 gi|194421972|gb|EDX37977.1| ribosome releasing factor [Escherichia coli 101-1]
 gi|208728965|gb|EDZ78566.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4206]
 gi|208734052|gb|EDZ82739.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4045]
 gi|208739249|gb|EDZ86931.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4042]
 gi|209159436|gb|ACI36869.1| ribosome releasing factor [Escherichia coli O157:H7 str. EC4115]
 gi|209745824|gb|ACI71219.1| ribosome releasing factor [Escherichia coli]
 gi|209745826|gb|ACI71220.1| ribosome releasing factor [Escherichia coli]
 gi|209745828|gb|ACI71221.1| ribosome releasing factor [Escherichia coli]
 gi|209745830|gb|ACI71222.1| ribosome releasing factor [Escherichia coli]
 gi|209745832|gb|ACI71223.1| ribosome releasing factor [Escherichia coli]
 gi|209910621|dbj|BAG75695.1| ribosome releasing factor [Escherichia coli SE11]
 gi|215263405|emb|CAS07725.1| ribosome recycling factor [Escherichia coli O127:H6 str. E2348/69]
 gi|217321359|gb|EEC29783.1| ribosome releasing factor [Escherichia coli O157:H7 str. TW14588]
 gi|218350369|emb|CAU96052.1| ribosome recycling factor [Escherichia coli 55989]
 gi|218355168|emb|CAQ87775.1| ribosome recycling factor [Escherichia fergusonii ATCC 35469]
 gi|218359520|emb|CAQ97058.1| ribosome recycling factor [Escherichia coli IAI1]
 gi|218363882|emb|CAR01547.1| ribosome recycling factor [Escherichia coli S88]
 gi|218368578|emb|CAR16315.1| ribosome recycling factor [Escherichia coli IAI39]
 gi|218425611|emb|CAR06397.1| ribosome recycling factor [Escherichia coli ED1a]
 gi|218430523|emb|CAR11389.1| ribosome recycling factor [Escherichia coli UMN026]
 gi|222032002|emb|CAP74741.1| ribosome recycling factor [Escherichia coli LF82]
 gi|226840697|gb|EEH72699.1| ribosome-recycling factor [Escherichia sp. 1_1_43]
 gi|226902243|gb|EEH88502.1| ribosome-recycling factor [Escherichia sp. 3_2_53FAA]
 gi|227838053|gb|EEJ48519.1| ribosome recycling factor [Escherichia coli 83972]
 gi|238863488|gb|ACR65486.1| ribosome recycling factor [Escherichia coli BW2952]
 gi|242376003|emb|CAQ30686.1| ribosome recycling factor [Escherichia coli BL21(DE3)]
 gi|253325845|gb|ACT30447.1| ribosome recycling factor [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253972192|gb|ACT37863.1| ribosome releasing factor [Escherichia coli B str. REL606]
 gi|253976401|gb|ACT42071.1| ribosome releasing factor [Escherichia coli BL21(DE3)]
 gi|254590705|gb|ACT70066.1| ribosome recycling factor [Escherichia coli O157:H7 str. TW14359]
 gi|257752031|dbj|BAI23533.1| ribosome recycling factor [Escherichia coli O26:H11 str. 11368]
 gi|257757551|dbj|BAI29048.1| ribosome recycling factor [Escherichia coli O103:H2 str. 12009]
 gi|257762677|dbj|BAI34172.1| ribosome recycling factor [Escherichia coli O111:H- str. 11128]
 gi|260450624|gb|ACX41046.1| ribosome recycling factor [Escherichia coli DH1]
 gi|281177397|dbj|BAI53727.1| ribosome releasing factor [Escherichia coli SE15]
 gi|281599527|gb|ADA72511.1| Ribosome recycling factor [Shigella flexneri 2002017]
 gi|284919947|emb|CBG33002.1| ribosome recycling factor [Escherichia coli 042]
 gi|290760867|gb|ADD54828.1| Ribosome recycling factor [Escherichia coli O55:H7 str. CB9615]
 gi|291321282|gb|EFE60724.1| ribosome recycling factor [Escherichia coli B088]
 gi|291430156|gb|EFF03170.1| frr [Escherichia coli FVEC1412]
 gi|291430775|gb|EFF03773.1| ribosome recycling factor [Escherichia coli B185]
 gi|291472515|gb|EFF14997.1| ribosome recycling factor [Escherichia coli B354]
 gi|294492515|gb|ADE91271.1| ribosome recycling factor [Escherichia coli IHE3034]
 gi|298281111|gb|EFI22612.1| ribosome-recycling factor [Escherichia coli FVEC1302]
 gi|299878297|gb|EFI86508.1| ribosome recycling factor [Escherichia coli MS 196-1]
 gi|300298344|gb|EFJ54729.1| ribosome recycling factor [Escherichia coli MS 185-1]
 gi|300306582|gb|EFJ61102.1| ribosome recycling factor [Escherichia coli MS 200-1]
 gi|300317085|gb|EFJ66869.1| ribosome recycling factor [Escherichia coli MS 175-1]
 gi|300355739|gb|EFJ71609.1| ribosome recycling factor [Escherichia coli MS 198-1]
 gi|300395747|gb|EFJ79285.1| ribosome recycling factor [Escherichia coli MS 69-1]
 gi|300405877|gb|EFJ89415.1| ribosome recycling factor [Escherichia coli MS 84-1]
 gi|300406530|gb|EFJ90068.1| ribosome recycling factor [Escherichia coli MS 45-1]
 gi|300412843|gb|EFJ96153.1| ribosome recycling factor [Escherichia coli MS 115-1]
 gi|300420663|gb|EFK03974.1| ribosome recycling factor [Escherichia coli MS 182-1]
 gi|300450828|gb|EFK14448.1| ribosome recycling factor [Escherichia coli MS 116-1]
 gi|300456461|gb|EFK19954.1| ribosome recycling factor [Escherichia coli MS 21-1]
 gi|300460102|gb|EFK23595.1| ribosome recycling factor [Escherichia coli MS 187-1]
 gi|300523382|gb|EFK44451.1| ribosome recycling factor [Escherichia coli MS 119-7]
 gi|300531419|gb|EFK52481.1| ribosome recycling factor [Escherichia coli MS 107-1]
 gi|300839413|gb|EFK67173.1| ribosome recycling factor [Escherichia coli MS 124-1]
 gi|300843941|gb|EFK71701.1| ribosome recycling factor [Escherichia coli MS 78-1]
 gi|301075281|gb|EFK90087.1| ribosome recycling factor [Escherichia coli MS 146-1]
 gi|305850890|gb|EFM51345.1| ribosome recycling factor [Escherichia coli NC101]
 gi|306908360|gb|EFN38858.1| ribosome recycling factor [Escherichia coli W]
 gi|307552022|gb|ADN44797.1| ribosome recycling factor [Escherichia coli ABU 83972]
 gi|307629748|gb|ADN74052.1| ribosome recycling factor [Escherichia coli UM146]
 gi|308120053|gb|EFO57315.1| ribosome recycling factor [Escherichia coli MS 145-7]
 gi|309700380|emb|CBI99668.1| ribosome recycling factor [Escherichia coli ETEC H10407]
 gi|310337770|gb|EFQ02881.1| ribosome recycling factor [Escherichia coli 1827-70]
 gi|312289551|gb|EFR17445.1| ribosome recycling factor [Escherichia coli 2362-75]
 gi|312944780|gb|ADR25607.1| ribosome recycling factor [Escherichia coli O83:H1 str. NRG 857C]
 gi|313646768|gb|EFS11227.1| ribosome recycling factor [Shigella flexneri 2a str. 2457T]
 gi|315059390|gb|ADT73717.1| ribosome recycling factor [Escherichia coli W]
 gi|315134862|dbj|BAJ42021.1| ribosome recycling factor [Escherichia coli DH1]
 gi|315254974|gb|EFU34942.1| ribosome recycling factor [Escherichia coli MS 85-1]
 gi|315285261|gb|EFU44706.1| ribosome recycling factor [Escherichia coli MS 110-3]
 gi|315294576|gb|EFU53923.1| ribosome recycling factor [Escherichia coli MS 153-1]
 gi|315300676|gb|EFU59903.1| ribosome recycling factor [Escherichia coli MS 16-3]
 gi|315616344|gb|EFU96962.1| ribosome recycling factor [Escherichia coli 3431]
 gi|320173347|gb|EFW48550.1| Ribosome recycling factor [Shigella dysenteriae CDC 74-1112]
 gi|320179914|gb|EFW54858.1| Ribosome recycling factor [Shigella boydii ATCC 9905]
 gi|320186593|gb|EFW61318.1| Ribosome recycling factor [Shigella flexneri CDC 796-83]
 gi|320190302|gb|EFW64952.1| Ribosome recycling factor [Escherichia coli O157:H7 str. EC1212]
 gi|320196952|gb|EFW71573.1| Ribosome recycling factor [Escherichia coli WV_060327]
 gi|320200303|gb|EFW74889.1| Ribosome recycling factor [Escherichia coli EC4100B]
 gi|320639978|gb|EFX09563.1| ribosome recycling factor [Escherichia coli O157:H7 str. G5101]
 gi|320644748|gb|EFX13792.1| ribosome recycling factor [Escherichia coli O157:H- str. 493-89]
 gi|320652904|gb|EFX21142.1| ribosome recycling factor [Escherichia coli O157:H- str. H 2687]
 gi|320658292|gb|EFX26021.1| ribosome recycling factor [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320663602|gb|EFX30886.1| ribosome recycling factor [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668915|gb|EFX35710.1| ribosome recycling factor [Escherichia coli O157:H7 str. LSU-61]
 gi|323157991|gb|EFZ44093.1| ribosome recycling factor [Escherichia coli EPECa14]
 gi|323160209|gb|EFZ46168.1| ribosome recycling factor [Escherichia coli E128010]
 gi|323165873|gb|EFZ51655.1| ribosome recycling factor [Shigella sonnei 53G]
 gi|323170963|gb|EFZ56612.1| ribosome recycling factor [Escherichia coli LT-68]
 gi|323176486|gb|EFZ62078.1| ribosome recycling factor [Escherichia coli 1180]
 gi|323181679|gb|EFZ67093.1| ribosome recycling factor [Escherichia coli 1357]
 gi|323190428|gb|EFZ75703.1| ribosome recycling factor [Escherichia coli RN587/1]
 gi|323380051|gb|ADX52319.1| ribosome recycling factor [Escherichia coli KO11]
 gi|323935012|gb|EGB31385.1| ribosome recycling protein [Escherichia coli E1520]
 gi|323939952|gb|EGB36150.1| ribosome recycling protein [Escherichia coli E482]
 gi|323945647|gb|EGB41696.1| ribosome recycling protein [Escherichia coli H120]
 gi|323950829|gb|EGB46706.1| ribosome recycling protein [Escherichia coli H252]
 gi|323955133|gb|EGB50908.1| ribosome recycling protein [Escherichia coli H263]
 gi|323959933|gb|EGB55580.1| ribosome recycling protein [Escherichia coli H489]
 gi|323964935|gb|EGB60401.1| ribosome recycling protein [Escherichia coli M863]
 gi|323970651|gb|EGB65907.1| ribosome recycling protein [Escherichia coli TA007]
 gi|323975660|gb|EGB70756.1| ribosome recycling protein [Escherichia coli TW10509]
 gi|324008234|gb|EGB77453.1| ribosome recycling factor [Escherichia coli MS 57-2]
 gi|324014110|gb|EGB83329.1| ribosome recycling factor [Escherichia coli MS 60-1]
 gi|324017821|gb|EGB87040.1| ribosome recycling factor [Escherichia coli MS 117-3]
 gi|324112417|gb|EGC06394.1| ribosome recycling protein [Escherichia fergusonii B253]
 gi|324118292|gb|EGC12187.1| ribosome recycling protein [Escherichia coli E1167]
 gi|325496104|gb|EGC93963.1| ribosome recycling factor [Escherichia fergusonii ECD227]
 gi|326339773|gb|EGD63581.1| Ribosome recycling factor [Escherichia coli O157:H7 str. 1044]
 gi|326345108|gb|EGD68851.1| Ribosome recycling factor [Escherichia coli O157:H7 str. 1125]
 gi|327255151|gb|EGE66754.1| ribosome recycling factor [Escherichia coli STEC_7v]
 gi|330910022|gb|EGH38532.1| ribosome recycling factor [Escherichia coli AA86]
 gi|331040372|gb|EGI12579.1| ribosome recycling factor [Escherichia coli H736]
 gi|331046072|gb|EGI18191.1| ribosome recycling factor [Escherichia coli M605]
 gi|331051531|gb|EGI23580.1| ribosome recycling factor [Escherichia coli M718]
 gi|331052285|gb|EGI24324.1| ribosome recycling factor [Escherichia coli TA206]
 gi|331061461|gb|EGI33424.1| ribosome recycling factor [Escherichia coli TA143]
 gi|331066624|gb|EGI38501.1| ribosome recycling factor [Escherichia coli TA271]
 gi|331071523|gb|EGI42880.1| ribosome recycling factor [Escherichia coli TA280]
 gi|331072214|gb|EGI43550.1| ribosome recycling factor [Escherichia coli H591]
 gi|331081778|gb|EGI52939.1| ribosome recycling factor [Escherichia coli H299]
 gi|332095214|gb|EGJ00243.1| ribosome recycling factor [Shigella boydii 5216-82]
 gi|332098804|gb|EGJ03764.1| ribosome recycling factor [Shigella boydii 3594-74]
 gi|332105198|gb|EGJ08544.1| ribosome-recycling factor [Shigella sp. D9]
 gi|332341505|gb|AEE54839.1| ribosome recycling factor [Escherichia coli UMNK88]
 gi|332762066|gb|EGJ92337.1| ribosome recycling factor [Shigella flexneri 2747-71]
 gi|332762175|gb|EGJ92444.1| ribosome recycling factor [Shigella flexneri 4343-70]
 gi|332765019|gb|EGJ95247.1| ribosome recycling factor [Shigella flexneri K-671]
 gi|332768674|gb|EGJ98854.1| ribosome recycling factor [Shigella flexneri 2930-71]
 gi|333009268|gb|EGK28724.1| ribosome recycling factor [Shigella flexneri K-218]
 gi|333010666|gb|EGK30099.1| ribosome recycling factor [Shigella flexneri VA-6]
 gi|333011010|gb|EGK30429.1| ribosome recycling factor [Shigella flexneri K-272]
 gi|333021805|gb|EGK41054.1| ribosome recycling factor [Shigella flexneri K-227]
 gi|333022235|gb|EGK41474.1| ribosome recycling factor [Shigella flexneri K-304]
          Length = 185

 Score =  248 bits (633), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE++++
Sbjct: 67  INVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++D+QK+TD+ IK I++   +K+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF 185


>gi|218679110|ref|ZP_03527007.1| ribosome recycling factor [Rhizobium etli CIAT 894]
          Length = 186

 Score =  248 bits (633), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 110/186 (59%), Positives = 139/186 (74%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ID++ +K RM   +S  K D+ +LRTGR S ++LD V +EAYGS +PLNQVAN+TV
Sbjct: 1   MSEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +V+RGI ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLSVSVWDKSMVGAVDRGIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK+++R++RRDGMD LKK+ K G   +D   +    +QK+TD TI  ID    EK+
Sbjct: 121 YAEKSKVAIRHVRRDGMDGLKKAEKDGVIGQDEGRAQSERVQKMTDETISEIDRLLAEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|226327052|ref|ZP_03802570.1| hypothetical protein PROPEN_00913 [Proteus penneri ATCC 35198]
 gi|225204270|gb|EEG86624.1| hypothetical protein PROPEN_00913 [Proteus penneri ATCC 35198]
          Length = 202

 Score =  248 bits (633), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 80/180 (44%), Positives = 116/180 (64%), Gaps = 1/180 (0%)

Query: 8   QNIKDRMGDTISFLKK-DMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ ++RM  ++  LKK  +  +RTGR SPS+LD + VE YG+  PLNQVANV   + R L
Sbjct: 23  KDAQERMDKSVEALKKSQINKVRTGRASPSLLDGIVVEYYGAPTPLNQVANVVAEDGRTL 82

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++V+D+ +  +VE+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ +
Sbjct: 83  AITVFDRTLAPAVEKAIMASDLGLNPSSAGAIIRVPLPPLTEERRKDLIKVVRGDAEQGR 142

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D +K   K  + SED     ++DIQK+TD  IK ID     K+ E+M F
Sbjct: 143 VSIRNIRRDANDKVKALLKDKEISEDDERRSQDDIQKLTDMFIKKIDDALALKEAELMEF 202


>gi|16078715|ref|NP_389534.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221309530|ref|ZP_03591377.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221313854|ref|ZP_03595659.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221318777|ref|ZP_03600071.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323049|ref|ZP_03604343.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|321315419|ref|YP_004207706.1| ribosome recycling factor [Bacillus subtilis BSn5]
 gi|3122762|sp|P81101|RRF_BACSU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor; AltName: Full=Vegetative
           protein 12B; Short=VEG12B
 gi|2634024|emb|CAB13525.1| ribosome recycling factor [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291484207|dbj|BAI85282.1| ribosome recycling factor [Bacillus subtilis subsp. natto BEST195]
 gi|320021693|gb|ADV96679.1| ribosome recycling factor [Bacillus subtilis BSn5]
          Length = 185

 Score =  248 bits (633), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M   I+  ++++ T+R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTQTKEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK  +  +E+ I +++LGL P  +G ++RI +P  TEERR  LVKV   YAE++K
Sbjct: 66  VITPYDKTAIGDIEKAILKADLGLTPTSDGNMIRIAIPALTEERRKELVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM  
Sbjct: 126 VAVRNVRRDANDDLKKLEKNGDITEDELRASTEDVQKLTDEYVSKIDSVTKDKEKEIMEV 185


>gi|239832046|ref|ZP_04680375.1| ribosome recycling factor [Ochrobactrum intermedium LMG 3301]
 gi|239824313|gb|EEQ95881.1| ribosome recycling factor [Ochrobactrum intermedium LMG 3301]
          Length = 186

 Score =  248 bits (633), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 97/186 (52%), Positives = 126/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   I+ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN+TV
Sbjct: 1   MSDAFDINDLKRRMEGAINSLKHDLGGLRTGRASASLLEPIVIEAYGSTMPINQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGTTLRIPLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDTLKKLEKDSLISQDDSRVLSEKVQKLTDETIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|89098609|ref|ZP_01171491.1| ribosome recycling factor [Bacillus sp. NRRL B-14911]
 gi|89086571|gb|EAR65690.1| ribosome recycling factor [Bacillus sp. NRRL B-14911]
          Length = 185

 Score =  248 bits (633), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N K+RM   I    +++ ++R GR S S+LD + V+ YG+  P+NQ+A ++V E R+L
Sbjct: 6   ISNSKERMTKAIQAYSRELASIRAGRASASLLDRITVDYYGAPTPVNQLAGISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E+ I +S+LGLNP  +G +LR+ +P  TEERR  LVKV    +E +K
Sbjct: 66  VIQPYDKSILGEIEKAIIKSDLGLNPTNDGNLLRLAIPALTEERRKELVKVVKKESEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D LKK  K+G+ +ED +    +DIQK+TD  I  +DS  ++K+KEI+  
Sbjct: 126 VAIRNIRRDANDDLKKLEKNGEITEDDLRGYSDDIQKMTDEHITKVDSITKDKEKEILEV 185


>gi|262166334|ref|ZP_06034071.1| ribosome recycling factor [Vibrio mimicus VM223]
 gi|262170774|ref|ZP_06038452.1| ribosome recycling factor [Vibrio mimicus MB-451]
 gi|261891850|gb|EEY37836.1| ribosome recycling factor [Vibrio mimicus MB-451]
 gi|262026050|gb|EEY44718.1| ribosome recycling factor [Vibrio mimicus VM223]
          Length = 185

 Score =  248 bits (633), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+++   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRDLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + DIQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKGLLKDKEISEDDERRAQEDIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|299067462|emb|CBJ38661.1| Ribosome recycling factor (Ribosome-releasing factor) [Ralstonia
           solanacearum CMR15]
          Length = 186

 Score =  247 bits (632), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVANV + + R + 
Sbjct: 8   KSAEQKMQKSIDAFKADLAKVRTGRAHAGLLDHVQVDYYGSMVPISQVANVGLSDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV++VE+ I +++LGLNP   G+V+R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKKMVSAVEKAIRDADLGLNPATMGEVIRVPMPPLTEERRKELTKVVKSEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  +  KK  K    SED     ++++QK+TD  +  +D    EK KEIM  
Sbjct: 128 AVRNVRRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDRFVAEVDKLVAEKDKEIMTV 186


>gi|260596592|ref|YP_003209163.1| ribosome recycling factor [Cronobacter turicensis z3032]
 gi|260215769|emb|CBA28183.1| Ribosome-recycling factor [Cronobacter turicensis z3032]
          Length = 185

 Score =  247 bits (632), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+ANVTV + R L 
Sbjct: 7   KDAEVRMDKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLANVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE++++
Sbjct: 67  INVFDRSMSPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLIKVVRGEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  +  ED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 127 AIRNVRRDANDKVKALLKDKEIGEDEDRRSQDDVQKMTDAAIKKVDAALADKEAELMQF 185


>gi|209549185|ref|YP_002281102.1| ribosome recycling factor [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226749935|sp|B5ZN86|RRF_RHILW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|209534941|gb|ACI54876.1| ribosome recycling factor [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 186

 Score =  247 bits (632), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 111/186 (59%), Positives = 139/186 (74%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M + ID++ +K RM   +S  K D+ +LRTGR S ++LD V +EAYGS +PLNQVAN+TV
Sbjct: 1   MTEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV++VERGI ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLSVSVWDKSMVSAVERGIRESNLGLNPIVDGQSLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK+++R++RRDGMD LKK+ K G   +D   +    +QK+TD TI  ID    EK+
Sbjct: 121 YAEKSKVAIRHVRRDGMDGLKKAEKDGVIGQDEGRAQSERVQKMTDETISEIDRLLGEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|116792732|gb|ABK26473.1| unknown [Picea sitchensis]
          Length = 279

 Score =  247 bits (632), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++  +RM  T+  +K +  ++RTGR SP+ LD V+VE YGS V L  +A V+V +   L+
Sbjct: 101 EDAIERMEKTLETIKTNFNSIRTGRASPAFLDRVEVEYYGSPVNLKSLAQVSVPDGGTLL 160

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  + S+E+ I +SNLGL P  +G V+R+ +P+ T ERR  L+KV    AE+ KI
Sbjct: 161 VQPYDKSSLKSIEKAISKSNLGLTPSNDGNVIRLSIPQLTSERRKELLKVVAKIAEEGKI 220

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +   +K  K  K SED V  L  D+QK+TD  IK +DS +++K+KE+M  
Sbjct: 221 AIRNIRRDAIKAYEKLEKEKKLSEDNVKDLSGDLQKVTDEFIKKVDSLYKQKEKELMTV 279


>gi|295696146|ref|YP_003589384.1| ribosome recycling factor [Bacillus tusciae DSM 2912]
 gi|295411748|gb|ADG06240.1| ribosome recycling factor [Bacillus tusciae DSM 2912]
          Length = 184

 Score =  247 bits (632), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  ++RM  ++  LKK+  ++R GR +P +LD V VE YG+ +P++Q+A++T  EPR+L
Sbjct: 5   MKQAEERMNKSLQALKKEFASVRAGRATPGLLDKVTVEYYGTSMPIHQLASITAPEPRLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  +A +E+ I +S+LGL P  +GQV+R+ +P+ T+ERR  L ++    AE+S+
Sbjct: 65  VIQPWDKGALAEIEKAILKSDLGLTPTNDGQVIRLAIPQLTQERRQELARMVRKLAEESR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+  D ++KS K G  SED    L+  IQ +TD  I+ ID     K+KEI   
Sbjct: 125 VAIRNIRREANDEIRKSEKDGSVSEDEGRRLQERIQGLTDRFIEEIDRLLAAKEKEITEV 184


>gi|262276524|ref|ZP_06054333.1| ribosome recycling factor [Grimontia hollisae CIP 101886]
 gi|262220332|gb|EEY71648.1| ribosome recycling factor [Grimontia hollisae CIP 101886]
          Length = 185

 Score =  247 bits (632), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + K+RM  ++  LK  +  +RTGR  P++LD + V+ YG+  PL Q+A++   + R L 
Sbjct: 7   ADAKERMQKSVEALKNTLSKIRTGRAHPALLDGLSVDYYGASTPLKQLASIVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKSITQAVEKAIMTSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     ++DIQK+TD+ +K ID+  E K+KE+M  
Sbjct: 127 AVRNIRRDANSELKALLKEKEISEDEERRGQDDIQKLTDAAVKEIDTILEAKEKELMEV 185


>gi|258620999|ref|ZP_05716033.1| Ribosome-recycling factor [Vibrio mimicus VM573]
 gi|258586387|gb|EEW11102.1| Ribosome-recycling factor [Vibrio mimicus VM573]
          Length = 185

 Score =  247 bits (632), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+++   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRDLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K    SED     + DIQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKGLLKDKDISEDDERRAQEDIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|116251980|ref|YP_767818.1| ribosome recycling factor [Rhizobium leguminosarum bv. viciae 3841]
 gi|241204507|ref|YP_002975603.1| ribosome recycling factor [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|166231215|sp|Q1MH51|RRF_RHIL3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|115256628|emb|CAK07716.1| putative ribosome recycling factor (ribosome releasing factor)
           [Rhizobium leguminosarum bv. viciae 3841]
 gi|240858397|gb|ACS56064.1| ribosome recycling factor [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 186

 Score =  247 bits (632), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 112/186 (60%), Positives = 140/186 (75%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ID++ +K RM   IS  K D+ +LRTGR S ++LD V VEAYGS +PLNQVAN+TV
Sbjct: 1   MSEGIDIKELKRRMDGAISVFKGDIASLRTGRASANILDPVTVEAYGSRMPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV++VERGI ESNLGLNPI++GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLSVSVWDKSMVSAVERGIRESNLGLNPIIDGQNLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK+++R++RRDGMD LKK+ K G   +D   +    +QK+TD TI  ID    EK+
Sbjct: 121 YAEKSKVAIRHVRRDGMDGLKKAEKDGVIGQDESRAQSERVQKMTDETISEIDRLLGEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|114569933|ref|YP_756613.1| ribosome recycling factor [Maricaulis maris MCS10]
 gi|122316100|sp|Q0APW2|RRF_MARMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114340395|gb|ABI65675.1| ribosome recycling factor [Maricaulis maris MCS10]
          Length = 186

 Score =  247 bits (632), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 89/186 (47%), Positives = 127/186 (68%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D  ++K RM   I  L+K+   LRTGR S  +L+ +KV+AYG+  P+NQ+ N++V
Sbjct: 1   MSDEYDENDLKRRMDGAIESLRKEFAGLRTGRASAGLLEPIKVDAYGTPTPINQLGNISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+ + VWDK MVA+V++ I  S +GLNP++EGQ+LRIP+P   EERR  + K+A  
Sbjct: 61  PEPRMITLQVWDKNMVAAVDKAIRNSGIGLNPVMEGQLLRIPIPPLNEERRAEIAKLAGN 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++VRN+RRDGMD LKK  K G  SED   +   D+QK+T+  IK ID   + K+
Sbjct: 121 YAEHARVAVRNVRRDGMDALKKMEKDGDLSEDEQKAFSEDVQKLTNEAIKRIDENLKSKQ 180

Query: 181 KEIMHF 186
           +EIM  
Sbjct: 181 EEIMQV 186


>gi|188581299|ref|YP_001924744.1| ribosome recycling factor [Methylobacterium populi BJ001]
 gi|238692901|sp|B1ZLC8|RRF_METPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|179344797|gb|ACB80209.1| ribosome recycling factor [Methylobacterium populi BJ001]
          Length = 187

 Score =  247 bits (632), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 93/182 (51%), Positives = 128/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL +IK RM   +S L KD+ +LRTGR +PS+LD ++VEAYG+ +P+ QVA V+V EPR
Sbjct: 6   FDLGDIKRRMQGAVSSLSKDLGSLRTGRATPSLLDPIQVEAYGASMPMAQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L +SVWD+ MV +VE+ I ES+LGLNP+ EGQ +R+ +PE  E+RR  +VKVAH Y E+
Sbjct: 66  LLSISVWDRSMVTNVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYTEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K G  SED       ++QK TD  I  ID     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDILKKLEKDGAISEDDEKRQAGEVQKATDDAIAEIDGVLASKEKEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|256830146|ref|YP_003158874.1| ribosome recycling factor [Desulfomicrobium baculatum DSM 4028]
 gi|256579322|gb|ACU90458.1| ribosome recycling factor [Desulfomicrobium baculatum DSM 4028]
          Length = 184

 Score =  247 bits (632), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 121/179 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+  +RM  +I  L+KD   LRTGR S +++D ++VE YG+  PLNQVA+V++ + R + 
Sbjct: 6   QDCTNRMQKSIDSLEKDFSKLRTGRASTALVDSIRVEYYGTPTPLNQVASVSIPDSRTIS 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S WD+    S+E+ I +S+LGL PI +G+ +RI +P  TEERR  LVK+A  Y E++K+
Sbjct: 66  ISPWDRNAFNSIEKAIMKSDLGLTPINDGRAIRINIPVLTEERRKDLVKMAKKYTEEAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D LKK   + + SED +   ++++QK TD+ +K  D+   EK+KEIM  
Sbjct: 126 AIRNVRRDVNDALKKMHTAKEISEDDLHKAQDEVQKTTDNFVKKADAVLAEKEKEIMEI 184


>gi|23502037|ref|NP_698164.1| ribosome recycling factor [Brucella suis 1330]
 gi|62290072|ref|YP_221865.1| ribosome recycling factor [Brucella abortus bv. 1 str. 9-941]
 gi|82699998|ref|YP_414572.1| ribosome recycling factor [Brucella melitensis biovar Abortus 2308]
 gi|148560306|ref|YP_001259077.1| ribosome recycling factor [Brucella ovis ATCC 25840]
 gi|161619110|ref|YP_001592997.1| ribosome recycling factor [Brucella canis ATCC 23365]
 gi|163843423|ref|YP_001627827.1| ribosome recycling factor [Brucella suis ATCC 23445]
 gi|189024311|ref|YP_001935079.1| ribosome recycling factor [Brucella abortus S19]
 gi|237815578|ref|ZP_04594575.1| ribosome recycling factor [Brucella abortus str. 2308 A]
 gi|254689382|ref|ZP_05152636.1| ribosome recycling factor [Brucella abortus bv. 6 str. 870]
 gi|254693866|ref|ZP_05155694.1| ribosome recycling factor [Brucella abortus bv. 3 str. Tulya]
 gi|254697517|ref|ZP_05159345.1| ribosome recycling factor [Brucella abortus bv. 2 str. 86/8/59]
 gi|254701900|ref|ZP_05163728.1| ribosome recycling factor [Brucella suis bv. 5 str. 513]
 gi|254704445|ref|ZP_05166273.1| ribosome recycling factor [Brucella suis bv. 3 str. 686]
 gi|254706659|ref|ZP_05168487.1| ribosome recycling factor [Brucella pinnipedialis M163/99/10]
 gi|254710233|ref|ZP_05172044.1| ribosome recycling factor [Brucella pinnipedialis B2/94]
 gi|254714229|ref|ZP_05176040.1| ribosome recycling factor [Brucella ceti M644/93/1]
 gi|254717665|ref|ZP_05179476.1| ribosome recycling factor [Brucella ceti M13/05/1]
 gi|254719221|ref|ZP_05181032.1| ribosome recycling factor [Brucella sp. 83/13]
 gi|254730412|ref|ZP_05188990.1| ribosome recycling factor [Brucella abortus bv. 4 str. 292]
 gi|256031727|ref|ZP_05445341.1| ribosome recycling factor [Brucella pinnipedialis M292/94/1]
 gi|256061240|ref|ZP_05451391.1| ribosome recycling factor [Brucella neotomae 5K33]
 gi|256159893|ref|ZP_05457615.1| ribosome recycling factor [Brucella ceti M490/95/1]
 gi|256255127|ref|ZP_05460663.1| ribosome recycling factor [Brucella ceti B1/94]
 gi|256257628|ref|ZP_05463164.1| ribosome recycling factor [Brucella abortus bv. 9 str. C68]
 gi|256369584|ref|YP_003107094.1| ribosome releasing factor [Brucella microti CCM 4915]
 gi|260546622|ref|ZP_05822361.1| ribosome recycling factor [Brucella abortus NCTC 8038]
 gi|260566308|ref|ZP_05836778.1| ribosome recycling factor [Brucella suis bv. 4 str. 40]
 gi|260754900|ref|ZP_05867248.1| ribosome recycling factor [Brucella abortus bv. 6 str. 870]
 gi|260758117|ref|ZP_05870465.1| ribosome recycling factor [Brucella abortus bv. 4 str. 292]
 gi|260761943|ref|ZP_05874286.1| ribosome recycling factor [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883912|ref|ZP_05895526.1| ribosome recycling factor [Brucella abortus bv. 9 str. C68]
 gi|261214152|ref|ZP_05928433.1| ribosome recycling factor [Brucella abortus bv. 3 str. Tulya]
 gi|261219506|ref|ZP_05933787.1| ribosome recycling factor [Brucella ceti M13/05/1]
 gi|261222325|ref|ZP_05936606.1| ribosome recycling factor [Brucella ceti B1/94]
 gi|261314119|ref|ZP_05953316.1| ribosome recycling factor [Brucella pinnipedialis M163/99/10]
 gi|261317792|ref|ZP_05956989.1| ribosome recycling factor [Brucella pinnipedialis B2/94]
 gi|261322001|ref|ZP_05961198.1| ribosome recycling factor [Brucella ceti M644/93/1]
 gi|261325248|ref|ZP_05964445.1| ribosome recycling factor [Brucella neotomae 5K33]
 gi|261752464|ref|ZP_05996173.1| ribosome recycling factor [Brucella suis bv. 5 str. 513]
 gi|261755123|ref|ZP_05998832.1| ribosome recycling factor [Brucella suis bv. 3 str. 686]
 gi|265984216|ref|ZP_06096951.1| ribosome recycling factor [Brucella sp. 83/13]
 gi|265988823|ref|ZP_06101380.1| ribosome recycling factor [Brucella pinnipedialis M292/94/1]
 gi|265998289|ref|ZP_06110846.1| ribosome recycling factor [Brucella ceti M490/95/1]
 gi|294852498|ref|ZP_06793171.1| ribosome recycling factor [Brucella sp. NVSL 07-0026]
 gi|297248470|ref|ZP_06932188.1| ribosome recycling factor [Brucella abortus bv. 5 str. B3196]
 gi|306837970|ref|ZP_07470828.1| ribosome recycling factor [Brucella sp. NF 2653]
 gi|306841882|ref|ZP_07474562.1| ribosome recycling factor [Brucella sp. BO2]
 gi|34924970|sp|Q8G0D8|RRF_BRUSU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|75496735|sp|Q57CY0|RRF_BRUAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123547502|sp|Q2YRP7|RRF_BRUA2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230414|sp|A5VQT0|RRF_BRUO2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044046|sp|A9M5H1|RRF_BRUC2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044047|sp|B0CGV6|RRF_BRUSI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689377|sp|B2S608|RRF_BRUA1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|23347991|gb|AAN30079.1| ribosome recycling factor [Brucella suis 1330]
 gi|62196204|gb|AAX74504.1| Frr, ribosome recycling factor [Brucella abortus bv. 1 str. 9-941]
 gi|82616099|emb|CAJ11137.1| Ribosome recycling factor [Brucella melitensis biovar Abortus 2308]
 gi|148371563|gb|ABQ61542.1| ribosome recycling factor [Brucella ovis ATCC 25840]
 gi|161335921|gb|ABX62226.1| ribosome recycling factor [Brucella canis ATCC 23365]
 gi|163674146|gb|ABY38257.1| ribosome recycling factor [Brucella suis ATCC 23445]
 gi|189019883|gb|ACD72605.1| Ribosome recycling factor [Brucella abortus S19]
 gi|237788876|gb|EEP63087.1| ribosome recycling factor [Brucella abortus str. 2308 A]
 gi|255999746|gb|ACU48145.1| ribosome releasing factor [Brucella microti CCM 4915]
 gi|260095672|gb|EEW79549.1| ribosome recycling factor [Brucella abortus NCTC 8038]
 gi|260155826|gb|EEW90906.1| ribosome recycling factor [Brucella suis bv. 4 str. 40]
 gi|260668435|gb|EEX55375.1| ribosome recycling factor [Brucella abortus bv. 4 str. 292]
 gi|260672375|gb|EEX59196.1| ribosome recycling factor [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675008|gb|EEX61829.1| ribosome recycling factor [Brucella abortus bv. 6 str. 870]
 gi|260873440|gb|EEX80509.1| ribosome recycling factor [Brucella abortus bv. 9 str. C68]
 gi|260915759|gb|EEX82620.1| ribosome recycling factor [Brucella abortus bv. 3 str. Tulya]
 gi|260920909|gb|EEX87562.1| ribosome recycling factor [Brucella ceti B1/94]
 gi|260924595|gb|EEX91163.1| ribosome recycling factor [Brucella ceti M13/05/1]
 gi|261294691|gb|EEX98187.1| ribosome recycling factor [Brucella ceti M644/93/1]
 gi|261297015|gb|EEY00512.1| ribosome recycling factor [Brucella pinnipedialis B2/94]
 gi|261301228|gb|EEY04725.1| ribosome recycling factor [Brucella neotomae 5K33]
 gi|261303145|gb|EEY06642.1| ribosome recycling factor [Brucella pinnipedialis M163/99/10]
 gi|261742217|gb|EEY30143.1| ribosome recycling factor [Brucella suis bv. 5 str. 513]
 gi|261744876|gb|EEY32802.1| ribosome recycling factor [Brucella suis bv. 3 str. 686]
 gi|262552757|gb|EEZ08747.1| ribosome recycling factor [Brucella ceti M490/95/1]
 gi|264661020|gb|EEZ31281.1| ribosome recycling factor [Brucella pinnipedialis M292/94/1]
 gi|264662808|gb|EEZ33069.1| ribosome recycling factor [Brucella sp. 83/13]
 gi|294821087|gb|EFG38086.1| ribosome recycling factor [Brucella sp. NVSL 07-0026]
 gi|297175639|gb|EFH34986.1| ribosome recycling factor [Brucella abortus bv. 5 str. B3196]
 gi|306288012|gb|EFM59414.1| ribosome recycling factor [Brucella sp. BO2]
 gi|306406894|gb|EFM63115.1| ribosome recycling factor [Brucella sp. NF 2653]
          Length = 186

 Score =  247 bits (632), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 95/186 (51%), Positives = 126/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   ++ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN++V
Sbjct: 1   MSDAFDINDLKRRMEGAVNALKHDLGGLRTGRASASLLEPITIEAYGSTMPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGMTLRIPLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDQLKKLEKDSVISQDESRVLSEKVQKLTDDTIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|311280859|ref|YP_003943090.1| ribosome recycling factor [Enterobacter cloacae SCF1]
 gi|308750054|gb|ADO49806.1| ribosome recycling factor [Enterobacter cloacae SCF1]
          Length = 185

 Score =  247 bits (632), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE++++
Sbjct: 67  INVFDRSMSPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKEKEISEDDDRRSQDDVQKMTDAAIKKVDAALADKEAELMQF 185


>gi|254469349|ref|ZP_05082754.1| ribosome recycling factor [Pseudovibrio sp. JE062]
 gi|211961184|gb|EEA96379.1| ribosome recycling factor [Pseudovibrio sp. JE062]
          Length = 185

 Score =  247 bits (632), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 98/186 (52%), Positives = 134/186 (72%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ +D  ++  RM   I+ LK +   LRTGR S SMLD + V+AYG+ +P+NQVA V+V
Sbjct: 1   MSE-LDYDDLDRRMNGAITALKHEFAGLRTGRASASMLDTISVDAYGAPMPINQVATVSV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML V VWDK MVA+ E+ I ES+LGLNP+V+GQ+LR+P+PE  EERR  LVKVAH 
Sbjct: 60  PEPRMLSVQVWDKSMVAATEKAIRESSLGLNPVVDGQILRLPIPELNEERRQELVKVAHK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE++KI+ R++RRDGMD +KK  K+G+ SED   S  + +QK+TD  I  +DS   +K+
Sbjct: 120 YAEQAKIAARHVRRDGMDTIKKLEKAGEMSEDDARSASDMVQKMTDDIIGEVDSVLAKKE 179

Query: 181 KEIMHF 186
           +EI   
Sbjct: 180 QEIKQV 185


>gi|153009362|ref|YP_001370577.1| ribosome recycling factor [Ochrobactrum anthropi ATCC 49188]
 gi|166230810|sp|A6X0J4|RRF_OCHA4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151561250|gb|ABS14748.1| ribosome recycling factor [Ochrobactrum anthropi ATCC 49188]
          Length = 186

 Score =  247 bits (632), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 97/186 (52%), Positives = 126/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   I+ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN+TV
Sbjct: 1   MSDAFDINDLKRRMEGAINSLKHDLNGLRTGRASASLLEPIVIEAYGSTMPINQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGTTLRIPLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDTLKKLEKDSLISQDDGRVLSEKVQKLTDETIAEMDKVVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|158423320|ref|YP_001524612.1| ribosome recycling factor [Azorhizobium caulinodans ORS 571]
 gi|172047942|sp|A8I468|RRF_AZOC5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|158330209|dbj|BAF87694.1| ribosome recycling factor [Azorhizobium caulinodans ORS 571]
          Length = 186

 Score =  247 bits (632), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 95/186 (51%), Positives = 127/186 (68%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M    D+ +IK RM   ++ LK+++  LRTGR S S+L+ + V+AYG+++PL QVA V+V
Sbjct: 1   MTTAFDIADIKRRMAGAVTSLKQELGGLRTGRASASLLEPITVDAYGANMPLAQVATVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L V VWD+ MV +VE+ I +SNLGLNP  EGQ LRI +PE  EERR  LVKVAH 
Sbjct: 61  PEPRLLSVQVWDRGMVNAVEKAIRDSNLGLNPNTEGQTLRIRIPELNEERRKELVKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++VR++RRDGMD LKK  K    S D +  L  D+QK TD TI  +D     K+
Sbjct: 121 YAEAARVAVRHVRRDGMDLLKKLEKDSAISSDDMERLSKDVQKATDETISEVDQTLAHKE 180

Query: 181 KEIMHF 186
           KEI+  
Sbjct: 181 KEILSV 186


>gi|152976190|ref|YP_001375707.1| ribosome recycling factor [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189044044|sp|A7GRF4|RRF_BACCN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|152024942|gb|ABS22712.1| ribosome recycling factor [Bacillus cytotoxicus NVH 391-98]
          Length = 185

 Score =  247 bits (632), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++  ++M   ++   +++ T+R GR S S+LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   IKSSTEKMEKAVAAYSRELATVRAGRASASILDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVKV   YAE +K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRELVKVVKKYAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D   + K++EIM  
Sbjct: 126 VAIRNVRRDGNDELKKLEKAGEMTEDDLRGYTEDIQKETDKYIAKVDEIAKNKEQEIMEV 185


>gi|16759209|ref|NP_454826.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16763609|ref|NP_459224.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29140759|ref|NP_804101.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62178789|ref|YP_215206.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161504662|ref|YP_001571774.1| ribosome recycling factor [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|161612590|ref|YP_001586555.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|167553369|ref|ZP_02347118.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167990104|ref|ZP_02571204.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168230526|ref|ZP_02655584.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168234997|ref|ZP_02660055.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168244985|ref|ZP_02669917.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168263914|ref|ZP_02685887.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168464218|ref|ZP_02698121.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168823247|ref|ZP_02835247.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194445385|ref|YP_002039459.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450690|ref|YP_002044209.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194470770|ref|ZP_03076754.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194737420|ref|YP_002113242.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197251811|ref|YP_002145224.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197261812|ref|ZP_03161886.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|198242060|ref|YP_002214180.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200388182|ref|ZP_03214794.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204927412|ref|ZP_03218614.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205351556|ref|YP_002225357.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207855737|ref|YP_002242388.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213163136|ref|ZP_03348846.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213416682|ref|ZP_03349826.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
 gi|213425945|ref|ZP_03358695.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213580802|ref|ZP_03362628.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213646665|ref|ZP_03376718.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|224582067|ref|YP_002635865.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238911285|ref|ZP_04655122.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|289825712|ref|ZP_06544880.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|54039297|sp|P66739|RRF_SALTI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|54042005|sp|P66738|RRF_SALTY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|75484798|sp|Q57T36|RRF_SALCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044071|sp|A9MPI9|RRF_SALAR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044072|sp|A9N0S0|RRF_SALPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749937|sp|B5F8T3|RRF_SALA4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749938|sp|B5FJ19|RRF_SALDC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749939|sp|B5R3I5|RRF_SALEP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749940|sp|B5RHF7|RRF_SALG2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689764|sp|B4TYD2|RRF_SALSV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238690679|sp|B4TK47|RRF_SALHS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238693523|sp|B4SV01|RRF_SALNS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809528|sp|C0Q6J5|RRF_SALPC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|25299716|pir||AE0529 ribosome recycling factor [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16418724|gb|AAL19183.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16501500|emb|CAD08677.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136383|gb|AAO67950.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62126422|gb|AAX64125.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|160866009|gb|ABX22632.1| hypothetical protein SARI_02783 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
 gi|161361954|gb|ABX65722.1| hypothetical protein SPAB_00281 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404048|gb|ACF64270.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408994|gb|ACF69213.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457134|gb|EDX45973.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194712922|gb|ACF92143.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195632657|gb|EDX51111.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197215514|gb|ACH52911.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197240067|gb|EDY22687.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197291879|gb|EDY31229.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197936576|gb|ACH73909.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199605280|gb|EDZ03825.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204324077|gb|EDZ09272.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205271337|emb|CAR36130.1| Ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205322189|gb|EDZ10028.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205331572|gb|EDZ18336.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205335095|gb|EDZ21859.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205336212|gb|EDZ22976.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205340485|gb|EDZ27249.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347503|gb|EDZ34134.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206707540|emb|CAR31814.1| Ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224466594|gb|ACN44424.1| ribosome releasing factor [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245451|emb|CBG23241.1| RRF [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267991909|gb|ACY86794.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301156846|emb|CBW16322.1| Ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911189|dbj|BAJ35163.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320084473|emb|CBY94266.1| Ribosome-recycling factor RRF; Ribosome-releasing factor
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321222197|gb|EFX47269.1| Ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322616043|gb|EFY12960.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620826|gb|EFY17686.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322623823|gb|EFY20660.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627271|gb|EFY24062.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322630578|gb|EFY27342.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322638204|gb|EFY34905.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640689|gb|EFY37340.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645527|gb|EFY42054.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648179|gb|EFY44646.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322657130|gb|EFY53413.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657500|gb|EFY53772.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663820|gb|EFY60020.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322666653|gb|EFY62831.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322672189|gb|EFY68301.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676500|gb|EFY72571.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322679408|gb|EFY75453.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686265|gb|EFY82249.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|322713243|gb|EFZ04814.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323128539|gb|ADX15969.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323193445|gb|EFZ78653.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323197533|gb|EFZ82668.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323201198|gb|EFZ86267.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323209593|gb|EFZ94526.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212155|gb|EFZ96979.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216460|gb|EGA01186.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323223350|gb|EGA07685.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225911|gb|EGA10131.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323228548|gb|EGA12677.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323236839|gb|EGA20915.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239661|gb|EGA23708.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242292|gb|EGA26321.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323249954|gb|EGA33850.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252384|gb|EGA36235.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323255667|gb|EGA39420.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262896|gb|EGA46446.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323265382|gb|EGA48878.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323271831|gb|EGA55249.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326621923|gb|EGE28268.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326626582|gb|EGE32925.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
 gi|332987171|gb|AEF06154.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 185

 Score =  247 bits (631), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE++++
Sbjct: 67  INVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K    SED     + ++QK+TD+ IK +D+   +K+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDAALADKEAELMQF 185


>gi|308068689|ref|YP_003870294.1| ribosome recycling factor (ribosome releasing factor)
           [Paenibacillus polymyxa E681]
 gi|305857968|gb|ADM69756.1| Ribosome recycling factor (Ribosome releasing factor)
           [Paenibacillus polymyxa E681]
          Length = 184

 Score =  247 bits (631), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 113/179 (63%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM   I  L++D+ +LR GR +P++LD V+VE YG+  P+NQ+ANV   + R L+
Sbjct: 7   KSAEERMQKAIQALQRDLASLRAGRATPALLDRVQVEYYGAMTPVNQLANVNTPDSRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +A +ER I +S+LGL P  +G  +R+ +P  TEERR  LVK+     E++KI
Sbjct: 67  IQPWDKSSLADIERAIQKSDLGLTPSNDGNTIRLSIPALTEERRTDLVKLTKKNGEEAKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  D +KK  KS   SED     + DIQK TD  I  +D     K+KEIM  
Sbjct: 127 AIRNIRRDANDDIKKLEKS-DISEDESRKHQEDIQKTTDKFIAEVDKVLAAKEKEIMEV 184


>gi|260775282|ref|ZP_05884179.1| ribosome recycling factor [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608463|gb|EEX34628.1| ribosome recycling factor [Vibrio coralliilyticus ATCC BAA-450]
          Length = 185

 Score =  247 bits (631), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   QDAQERMEKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAIMTSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQKITD+ +K +D     K+KE+M  
Sbjct: 127 AIRNIRRDANGELKALLKDKEISEDEDRKGQDEIQKITDAAVKQVDEVLAAKEKELMEV 185


>gi|115524563|ref|YP_781474.1| ribosome recycling factor [Rhodopseudomonas palustris BisA53]
 gi|122296187|sp|Q07NJ0|RRF_RHOP5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|115518510|gb|ABJ06494.1| ribosome recycling factor [Rhodopseudomonas palustris BisA53]
          Length = 187

 Score =  247 bits (631), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 92/182 (50%), Positives = 130/182 (71%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+  +K RM      L+ ++  LRTGR S SML+ V+V+AYG+H+PL QVA ++V EPR
Sbjct: 6   FDISELKRRMQGATHALQHELGGLRTGRASSSMLEPVQVDAYGTHMPLIQVATISVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK M+ +VE+ I +SNLGL+P  EGQV+R+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMIKAVEKAIVDSNLGLSPSTEGQVIRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K+ + SED    L +D+QK+TD+TI+ +D     K+KEI+
Sbjct: 126 ARVAVRHVRRDGLDTLKKLEKNHEISEDDQERLAHDVQKVTDATIQEVDQLLAAKEKEIL 185

Query: 185 HF 186
             
Sbjct: 186 TV 187


>gi|296330867|ref|ZP_06873342.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674385|ref|YP_003866057.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151872|gb|EFG92746.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412629|gb|ADM37748.1| ribosome recycling factor [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 185

 Score =  247 bits (631), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M   I+  ++++ T+R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTQTKEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  LVKV   YAE +K
Sbjct: 66  VVTPYDKSAIGDIEKAILKADLGITPTSDGNMIRIAIPALTEERRKELVKVVKKYAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM  
Sbjct: 126 VAVRNVRRDANDDLKKLEKNGDITEDELRASTEDVQKLTDEYVSKIDSVTKDKEKEIMEV 185


>gi|229086377|ref|ZP_04218553.1| Ribosome-recycling factor [Bacillus cereus Rock3-44]
 gi|228696893|gb|EEL49702.1| Ribosome-recycling factor [Bacillus cereus Rock3-44]
          Length = 185

 Score =  247 bits (631), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  ++M   ++   +++ ++R GR S S LD V+V+ YG+  P+ Q+AN+TV E R+L
Sbjct: 6   LKSANEKMEKAVAAYSRELASVRAGRASASALDKVQVDYYGAPTPVVQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  LVK    YAE++K
Sbjct: 66  VIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRKDLVKTVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+ + +ED +     DIQK TD  I  +D   + K+KEIM  
Sbjct: 126 VAVRNVRRDANDDLKKLEKASEITEDDLRGYAEDIQKETDKYIAKVDEIAKNKEKEIMEV 185


>gi|146310374|ref|YP_001175448.1| ribosome recycling factor [Enterobacter sp. 638]
 gi|166991556|sp|A4W6R7|RRF_ENT38 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145317250|gb|ABP59397.1| ribosome recycling factor [Enterobacter sp. 638]
          Length = 185

 Score =  247 bits (631), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMEKCVEAFKNQISKVRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDTRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE +++
Sbjct: 67  INVFDRSLGPAVEKAIMASDLGLNPSSAGTDIRVPLPALTEERRKELIKVVRGEAEGARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKLDAALADKEAELMQF 185


>gi|308173615|ref|YP_003920320.1| ribosome recycling factor [Bacillus amyloliquefaciens DSM 7]
 gi|307606479|emb|CBI42850.1| ribosome recycling factor [Bacillus amyloliquefaciens DSM 7]
 gi|328911756|gb|AEB63352.1| ribosome recycling factor [Bacillus amyloliquefaciens LL3]
          Length = 185

 Score =  247 bits (631), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+RM   ++   +++ ++R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTQTKERMEKAVAAYSRELASVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  LVKV   YAE++K
Sbjct: 66  VVTPYDKTAIGDIEKAILKADLGVTPTSDGTIIRIAIPALTEERRKELVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM  
Sbjct: 126 VAVRNVRRDSNDELKKLEKNGDITEDELRASSEDVQKLTDEFVSKIDSVTKDKEKEIMEV 185


>gi|197286128|ref|YP_002152000.1| ribosome recycling factor [Proteus mirabilis HI4320]
 gi|227357247|ref|ZP_03841604.1| ribosome recycling factor [Proteus mirabilis ATCC 29906]
 gi|238690100|sp|B4F2D0|RRF_PROMH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|194683615|emb|CAR44513.1| ribosome recycling factor [Proteus mirabilis HI4320]
 gi|227162510|gb|EEI47499.1| ribosome recycling factor [Proteus mirabilis ATCC 29906]
          Length = 185

 Score =  247 bits (631), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR SP++LD + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKSQINKVRTGRASPNLLDGIVVEYYGAPTPLNQVANVVAEDGRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +  +VE+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  ITVFDRTLAPAVEKAIMASDLGLNPSSAGAIIRVPLPPLTEERRKDLIKVVRGDAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  D +K   K  + SED     +++IQK+TD  IK ID     K+ E+M F
Sbjct: 127 SIRNIRRDANDKIKALLKDKEISEDDERRSQDEIQKLTDMFIKKIDEALTLKEAELMEF 185


>gi|225627627|ref|ZP_03785664.1| ribosome recycling factor [Brucella ceti str. Cudo]
 gi|260168860|ref|ZP_05755671.1| ribosome recycling factor [Brucella sp. F5/99]
 gi|261758348|ref|ZP_06002057.1| ribosome recycling factor [Brucella sp. F5/99]
 gi|225617632|gb|EEH14677.1| ribosome recycling factor [Brucella ceti str. Cudo]
 gi|261738332|gb|EEY26328.1| ribosome recycling factor [Brucella sp. F5/99]
          Length = 186

 Score =  247 bits (631), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 95/186 (51%), Positives = 126/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   ++ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN++V
Sbjct: 1   MSDAFDINDLKRRMEGAVNALKHDLGGLRTGRASASLLEPITIEAYGSTMPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGMTLRIPLPELNEQRRKELVKIAHR 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDQLKKLEKDSVISQDESRVLSEKVQKLTDDTIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|156935313|ref|YP_001439229.1| hypothetical protein ESA_03170 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533567|gb|ABU78393.1| hypothetical protein ESA_03170 [Cronobacter sakazakii ATCC BAA-894]
          Length = 173

 Score =  247 bits (631), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 73/173 (42%), Positives = 111/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+ANVTV + R L ++V+D+
Sbjct: 1   MDKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLANVTVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE++++++RN+R
Sbjct: 61  SMGPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLIKVVRGEAEQARVAIRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  +  ED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 121 RDANDKVKALLKDKEIGEDEDRRSQDDVQKLTDAAIKKVDAALADKEAELMQF 173


>gi|54297625|ref|YP_123994.1| ribosome recycling factor [Legionella pneumophila str. Paris]
 gi|60390234|sp|Q5X4K0|RRF_LEGPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|53751410|emb|CAH12828.1| Ribosome recycling factor [Legionella pneumophila str. Paris]
          Length = 185

 Score =  247 bits (631), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  TI  L  DM  +RTGR + S+LD V V+ YGS  PL+QVAN+T  + R ++
Sbjct: 7   QDSEKRMKKTIEALHSDMSKIRTGRANASLLDHVMVDYYGSPTPLSQVANITTSDSRTIL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K MVA++E+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV     E+ ++
Sbjct: 67  VTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  + LK+  K    SED        IQK+TD  I  +D+   EK+K++M  
Sbjct: 127 SIRNIRRDANNQLKELVKEKAISEDDERRAAEAIQKLTDRYISEVDAVLAEKEKDLMEI 185


>gi|310641584|ref|YP_003946342.1| ribosome-recycling factor [Paenibacillus polymyxa SC2]
 gi|309246534|gb|ADO56101.1| Ribosome-recycling factor [Paenibacillus polymyxa SC2]
          Length = 184

 Score =  246 bits (630), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 113/179 (63%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM   I  L++D+ +LR GR +P++LD V+VE YG+  P+NQ+AN+   + R L+
Sbjct: 7   KSAEERMQKAIQALQRDLSSLRAGRATPALLDRVQVEYYGAMTPVNQLANINTPDSRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +A +ER I +S+LGL P  +G  +R+ +P  TEERR  LVK+     E++KI
Sbjct: 67  IQPWDKSSLADIERAIQKSDLGLTPSNDGNTIRLSIPALTEERRTDLVKLTKKSGEEAKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  D +KK  KS   SED     + DIQK TD  I  +D     K+KEIM  
Sbjct: 127 AIRNIRRDANDDIKKMEKS-DISEDESRKHQEDIQKTTDKFIAEVDKVLAAKEKEIMEV 184


>gi|71278867|ref|YP_268298.1| ribosome recycling factor [Colwellia psychrerythraea 34H]
 gi|123633168|sp|Q485G7|RRF_COLP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|71144607|gb|AAZ25080.1| ribosome recycling factor [Colwellia psychrerythraea 34H]
          Length = 185

 Score =  246 bits (630), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 82/186 (44%), Positives = 118/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           ++++I  ++ +DRMG +I  LK  +  +RTGR   S+LD + VE YG   PLNQV NV+V
Sbjct: 2   IDEII--EDAQDRMGKSIEALKTSLTKIRTGRAHASLLDNIVVEYYGMDTPLNQVGNVSV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L ++V+DK M+++VE+ I +S+LGLNP   G ++RIP+P  TEERR  LVKV   
Sbjct: 60  PDARNLSITVFDKSMISAVEKAIMKSDLGLNPQSNGTLIRIPLPPLTEERRKDLVKVVRG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K+++RNIRRD     K   K  + SED     E+ IQKITD  +K +D    +K+
Sbjct: 120 EAEGGKVAIRNIRRDANSDFKSLLKEKEISEDDHHQAEDSIQKITDVFVKQVDEVLVKKE 179

Query: 181 KEIMHF 186
            E+M  
Sbjct: 180 AELMEI 185


>gi|209526796|ref|ZP_03275317.1| ribosome recycling factor [Arthrospira maxima CS-328]
 gi|209492757|gb|EDZ93091.1| ribosome recycling factor [Arthrospira maxima CS-328]
          Length = 187

 Score =  246 bits (630), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 67/187 (35%), Positives = 114/187 (60%), Gaps = 1/187 (0%)

Query: 1   MNQV-IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M++V + L ++++ M   +    +   T+RTGR + S+LD + VE YGS  PL  +A+++
Sbjct: 1   MSEVLVKLADVENLMKKALESTGRSFNTIRTGRANASLLDRITVEYYGSPTPLKSLASIS 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             +   + +  +D+  + ++E+ I  S++GL P  +G V+R+ +P  TE RR   VK+A 
Sbjct: 61  TPDASTITIQPFDRNSLNNIEKAISMSDVGLTPNNDGSVVRLNIPPLTEARRQEFVKLAG 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
            YAE+ ++SVRNIRRD +D ++K  K+G  SED    +++ IQK+TD     +D   E K
Sbjct: 121 KYAEEGRVSVRNIRRDAIDSVRKQEKNGDISEDESRDIQDKIQKLTDKYTAKVDELLEAK 180

Query: 180 KKEIMHF 186
           +K+IM  
Sbjct: 181 EKDIMTV 187


>gi|182677297|ref|YP_001831443.1| ribosome recycling factor [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|238691217|sp|B2ID97|RRF_BEII9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|182633180|gb|ACB93954.1| ribosome recycling factor [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 186

 Score =  246 bits (630), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 90/186 (48%), Positives = 124/186 (66%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   I+ LK ++  LRTGR + S+L+ V V+AYG  +PLNQVA ++V
Sbjct: 1   MSAEFDISDLKRRMQGAIATLKHELGGLRTGRATASLLEPVHVDAYGQSLPLNQVATISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML V VWDK MV  V++ I +SNLGL+P VEGQ+LRI +PE  E+RR  + KVAH 
Sbjct: 61  AEARMLSVQVWDKGMVGPVDKAIRDSNLGLSPTVEGQILRIRIPELNEQRRKEMAKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE++K++VR++RRDG+D LKK  K     ED       +IQK+TD  +  +D     K+
Sbjct: 121 YAEEAKVAVRHVRRDGIDTLKKLLKDKAIGEDDEKRHAAEIQKVTDQFVGEVDQALAAKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|52841939|ref|YP_095738.1| ribosome recycling factor [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54294594|ref|YP_127009.1| ribosome recycling factor [Legionella pneumophila str. Lens]
 gi|148359246|ref|YP_001250453.1| ribosome recycling factor [Legionella pneumophila str. Corby]
 gi|296107291|ref|YP_003618991.1| Ribosome recycling factor [Legionella pneumophila 2300/99 Alcoy]
 gi|60390233|sp|Q5WVZ0|RRF_LEGPL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390237|sp|Q5ZUT1|RRF_LEGPH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230796|sp|A5ICK7|RRF_LEGPC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|52629050|gb|AAU27791.1| ribosome recycling factor [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|53754426|emb|CAH15910.1| Ribosome recycling factor [Legionella pneumophila str. Lens]
 gi|148281019|gb|ABQ55107.1| ribosome recycling factor [Legionella pneumophila str. Corby]
 gi|295649192|gb|ADG25039.1| Ribosome recycling factor [Legionella pneumophila 2300/99 Alcoy]
 gi|307610406|emb|CBW99976.1| ribosome recycling factor [Legionella pneumophila 130b]
          Length = 185

 Score =  246 bits (630), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  TI  L  DM  +RTGR + S+LD V V+ YGS  PL+QVAN+T  + R ++
Sbjct: 7   QDSEKRMKKTIEALHTDMSKIRTGRANASLLDHVMVDYYGSPTPLSQVANITTSDSRTIL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K MVA++E+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV     E+ ++
Sbjct: 67  VTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  + LK+  K    SED        IQK+TD  I  +D+   EK+K++M  
Sbjct: 127 SIRNIRRDANNQLKELVKEKAISEDDERRAAEAIQKLTDRYISEVDAVLAEKEKDLMEI 185


>gi|222148859|ref|YP_002549816.1| ribosome recycling factor [Agrobacterium vitis S4]
 gi|254809485|sp|B9JX30|RRF_AGRVS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|221735845|gb|ACM36808.1| ribosome recycling factor [Agrobacterium vitis S4]
          Length = 186

 Score =  246 bits (630), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 111/186 (59%), Positives = 136/186 (73%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   IDL +IK RM   I+  K D+ +LRTGR S ++LD V VEAYGS V LN VAN+TV
Sbjct: 1   MTAGIDLNDIKRRMDGAINAFKSDLASLRTGRASANILDPVMVEAYGSRVALNTVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VS+WDK MV +V+R I ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLGVSIWDKSMVGAVDRAIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHG 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE SK+++R++RRDGMD LKK+ K G+  +D   SL   +QK+TD TI +ID    EK+
Sbjct: 121 YAENSKVAIRHVRRDGMDSLKKAEKDGEIGKDDARSLSEKLQKMTDDTISDIDRLLAEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|114797846|ref|YP_760475.1| ribosome recycling factor [Hyphomonas neptunium ATCC 15444]
 gi|123028025|sp|Q0C1B8|RRF_HYPNA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114738020|gb|ABI76145.1| ribosome recycling factor [Hyphomonas neptunium ATCC 15444]
          Length = 184

 Score =  246 bits (630), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 87/179 (48%), Positives = 126/179 (70%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+I+ RM   ++ L  +   LRTGR S ++LD ++V AYG   PL+QVA+VTV + RML 
Sbjct: 6   QDIERRMEGALASLASEFAGLRTGRASVNLLDSIQVPAYGGVTPLSQVASVTVSDTRMLS 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+VWDK +V + +R I +S LGLNP+++GQ LRIP+P   EERR+ L K+A  YAE +++
Sbjct: 66  VNVWDKTVVGAADRAIRDSGLGLNPVMDGQTLRIPIPPLNEERRVELTKIAGKYAEAARV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRDGMD LKK+ K G+ SED   +L  ++QK+TD+ +K +D   + K+ EIM  
Sbjct: 126 AVRNVRRDGMDDLKKAEKDGEISEDRHRALTEEVQKLTDAFVKRVDEALKAKEAEIMQV 184


>gi|257792211|ref|YP_003182817.1| ribosome recycling factor [Eggerthella lenta DSM 2243]
 gi|317490131|ref|ZP_07948620.1| ribosome recycling factor [Eggerthella sp. 1_3_56FAA]
 gi|325833584|ref|ZP_08166033.1| ribosome recycling factor [Eggerthella sp. HGA1]
 gi|257476108|gb|ACV56428.1| ribosome recycling factor [Eggerthella lenta DSM 2243]
 gi|316910836|gb|EFV32456.1| ribosome recycling factor [Eggerthella sp. 1_3_56FAA]
 gi|325485508|gb|EGC87977.1| ribosome recycling factor [Eggerthella sp. HGA1]
          Length = 185

 Score =  246 bits (630), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 64/178 (35%), Positives = 106/178 (59%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             ++RM   +  L     ++RTGR +  +LD ++V+ YG   P+NQ+A V   +  MLV+
Sbjct: 8   QAEERMEKALGSLGDAFASVRTGRANAMVLDRIRVDYYGVPTPVNQMAGVKTPDAHMLVI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WDK ++ ++E  I +S+LG+ P  +G V+R+P P  TEERR  LVK    YAE+++++
Sbjct: 68  EPWDKGVLGAIEHAILQSDLGVTPSNDGSVIRLPFPALTEERRRELVKQCKGYAEEARVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRN RRD    ++++ K     ED     + ++QK+TD  I  +D  F++K+ E+M  
Sbjct: 128 VRNARRDANSAIERAVKEDSLPEDDERRGQAEVQKLTDKYIAEVDEAFKKKEAEVMEI 185


>gi|92117244|ref|YP_576973.1| ribosome recycling factor [Nitrobacter hamburgensis X14]
 gi|91800138|gb|ABE62513.1| ribosome recycling factor [Nitrobacter hamburgensis X14]
          Length = 194

 Score =  246 bits (630), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 98/182 (53%), Positives = 127/182 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+  +K RM   I  LK ++  LRTGR + SML+ V+VEAYGSH+PLNQVA ++V E R
Sbjct: 13  FDINELKRRMQGAIQSLKHELGGLRTGRAAASMLEPVQVEAYGSHMPLNQVATISVPESR 72

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  EERR  LVKVAH YAE 
Sbjct: 73  LLSVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEA 132

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDG+D +KK  K+ + SED    L ND+QK TD  I  ID     K+KEI+
Sbjct: 133 AKVAVRHVRRDGLDTIKKLEKNHEISEDDEKRLANDVQKATDGVISEIDELLAGKEKEIL 192

Query: 185 HF 186
             
Sbjct: 193 TV 194


>gi|307729334|ref|YP_003906558.1| ribosome recycling factor [Burkholderia sp. CCGE1003]
 gi|307583869|gb|ADN57267.1| ribosome recycling factor [Burkholderia sp. CCGE1003]
          Length = 186

 Score =  246 bits (630), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGAEQKMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV  VE+ I ES+LGLNP  +G V+R+P+P  TEERR  L KV  + AE +K+
Sbjct: 68  VQPWEKKMVPVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDRFVAEIDKLVATKEAEIMTV 186


>gi|323497979|ref|ZP_08102988.1| ribosome recycling factor [Vibrio sinaloensis DSM 21326]
 gi|323317024|gb|EGA70026.1| ribosome recycling factor [Vibrio sinaloensis DSM 21326]
          Length = 185

 Score =  246 bits (630), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K+RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   QDAKERMDKSVEALKNNLSKVRTGRAHPSLLSGINVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +K +D     K+KE+M  
Sbjct: 127 AIRNIRRDANGELKALLKDKEISEDEDRKGQDEIQKLTDAAVKQVDEVLAAKEKELMEV 185


>gi|292489224|ref|YP_003532111.1| ribosome recycling factor [Erwinia amylovora CFBP1430]
 gi|291554658|emb|CBA22349.1| Ribosome recycling factor [Erwinia amylovora CFBP1430]
 gi|312173385|emb|CBX81639.1| Ribosome recycling factor [Erwinia amylovora ATCC BAA-2158]
          Length = 195

 Score =  246 bits (630), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + V+ YGS  PL Q+A+VTV + R L 
Sbjct: 17  KDAETRMEKCVEAFKNHISKIRTGRASPSILDGIMVDYYGSPTPLRQLASVTVEDSRTLK 76

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 77  INVFDRSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRV 136

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D LK   K  + SED     + D+QK+TD  IK +D+   +K+ E+M F
Sbjct: 137 SVRNVRRDANDKLKALLKDKEISEDDDRRAQEDVQKMTDIFIKKVDASLADKETELMDF 195


>gi|206578649|ref|YP_002240340.1| ribosome recycling factor [Klebsiella pneumoniae 342]
 gi|238893168|ref|YP_002917902.1| ribosome recycling factor [Klebsiella pneumoniae NTUH-K2044]
 gi|262044757|ref|ZP_06017804.1| ribosome recycling factor [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288937046|ref|YP_003441105.1| ribosome recycling factor [Klebsiella variicola At-22]
 gi|290512467|ref|ZP_06551833.1| ribosome recycling factor [Klebsiella sp. 1_1_55]
 gi|330001650|ref|ZP_08304076.1| ribosome recycling factor [Klebsiella sp. MS 92-3]
 gi|226749933|sp|B5Y1J9|RRF_KLEP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|206567707|gb|ACI09483.1| ribosome recycling factor [Klebsiella pneumoniae 342]
 gi|238545484|dbj|BAH61835.1| ribosome releasing factor [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259037907|gb|EEW39131.1| ribosome recycling factor [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288891755|gb|ADC60073.1| ribosome recycling factor [Klebsiella variicola At-22]
 gi|289774808|gb|EFD82810.1| ribosome recycling factor [Klebsiella sp. 1_1_55]
 gi|328537592|gb|EGF63812.1| ribosome recycling factor [Klebsiella sp. MS 92-3]
          Length = 185

 Score =  246 bits (630), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEIRMEKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE++++
Sbjct: 67  INVFDRSMSAAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKEKEISEDDDRRSQDDVQKMTDAAIKKVDAALADKEAELMQF 185


>gi|89092092|ref|ZP_01165047.1| ribosome recycling factor [Oceanospirillum sp. MED92]
 gi|89083827|gb|EAR63044.1| ribosome recycling factor [Oceanospirillum sp. MED92]
          Length = 185

 Score =  246 bits (630), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 74/186 (39%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   Q+  +RM  ++  L  +   +RTGR  PS+L+ ++V  YGS VPL+QVAN++V
Sbjct: 2   LNEIT--QDATERMQKSVEALVNNFKKIRTGRAHPSILEGIQVSYYGSDVPLSQVANISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L +  W+K MV  +E+ I  S+LGLNP   G+ +R+P+P  TEE R   +K A A
Sbjct: 60  EDGRTLSIVPWEKPMVPVIEKAIMTSDLGLNPATAGENIRVPMPPLTEETRKGYIKQARA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE +++++RNIRRD    LK   K  + +ED     E+ +QKITD  +  +DS  E+K+
Sbjct: 120 EAENARVAIRNIRRDANGDLKDLLKEKEITEDDQRRGEDQVQKITDKHVAEVDSLLEQKE 179

Query: 181 KEIMHF 186
           K++M  
Sbjct: 180 KDLMEI 185


>gi|148255867|ref|YP_001240452.1| ribosome recycling factor [Bradyrhizobium sp. BTAi1]
 gi|190360235|sp|A5EK52|RRF_BRASB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146408040|gb|ABQ36546.1| ribosome recycling factor [Bradyrhizobium sp. BTAi1]
          Length = 187

 Score =  246 bits (630), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 96/182 (52%), Positives = 127/182 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL  +K RM      LK ++  LRTGR S SM++ V+VEAYGSH+PLNQ+A V+V EPR
Sbjct: 6   FDLNELKRRMQGATQALKHELGGLRTGRASASMVEPVQVEAYGSHMPLNQLATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWD+ MV +VE+ I +SNLGL+P  EGQV+R+ +PE  +ERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDRTMVKAVEKAIVDSNLGLSPATEGQVIRLRIPELNQERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D +KK  K+ + SED    L  DIQK TDS I  ID     K+KEI+
Sbjct: 126 ARVAVRHVRRDGLDTVKKLEKNHEISEDDQERLATDIQKATDSVISEIDQLLAAKEKEIL 185

Query: 185 HF 186
             
Sbjct: 186 TV 187


>gi|306844023|ref|ZP_07476618.1| ribosome recycling factor [Brucella sp. BO1]
 gi|306275778|gb|EFM57502.1| ribosome recycling factor [Brucella sp. BO1]
          Length = 186

 Score =  246 bits (630), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 94/186 (50%), Positives = 126/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   ++ LK D+  LRTGR S S+L+ + +EAYGS +P+NQ+AN++V
Sbjct: 1   MSDAFDINDLKRRMEGAVNALKHDLGGLRTGRASASLLEPITIEAYGSTMPINQIANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGMTLRIPLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDQLKKLEKDSVISQDESRVLSEKVQKLTDDTIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|242278734|ref|YP_002990863.1| ribosome recycling factor [Desulfovibrio salexigens DSM 2638]
 gi|242121628|gb|ACS79324.1| ribosome recycling factor [Desulfovibrio salexigens DSM 2638]
          Length = 185

 Score =  246 bits (630), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N+V  L + K RM   ++ L+ D   LRTGR + S++D + V+ YG+  P+NQ+A+V++
Sbjct: 2   INEV--LADGKKRMEGALTALENDFAKLRTGRAATSLVDNISVDYYGTPTPINQLASVSI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + +  WDK     +++ + +S+LGLNP+ +G+VLRI +P  TEERR  LVK+A  
Sbjct: 60  PDSRTISIQPWDKGAFPLIDKALQQSDLGLNPVNDGKVLRIAIPPLTEERRKELVKIAKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E SKI++RN+RRD  D LKK  K    SED     ++D+QKITD  +K  D    EK+
Sbjct: 120 YTEDSKIAIRNVRRDMNDTLKKLEKDKDISEDEQRKAQDDVQKITDGYVKKCDVACGEKE 179

Query: 181 KEIMHF 186
           KEI+  
Sbjct: 180 KEILEI 185


>gi|157147397|ref|YP_001454716.1| hypothetical protein CKO_03195 [Citrobacter koseri ATCC BAA-895]
 gi|157084602|gb|ABV14280.1| hypothetical protein CKO_03195 [Citrobacter koseri ATCC BAA-895]
          Length = 173

 Score =  246 bits (630), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 73/173 (42%), Positives = 111/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D+
Sbjct: 1   MEKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+R
Sbjct: 61  SMSPAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SED     ++++QK+TD+ IK +D+   EK+ E+M F
Sbjct: 121 RDANDKVKALLKDKEISEDDDRRSQDEVQKLTDAAIKKVDAALTEKEAELMQF 173


>gi|262404591|ref|ZP_06081146.1| ribosome recycling factor [Vibrio sp. RC586]
 gi|262349623|gb|EEY98761.1| ribosome recycling factor [Vibrio sp. RC586]
          Length = 185

 Score =  246 bits (630), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+++   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRDLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + DIQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKGLLKDKEISEDDERRAQEDIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|300715399|ref|YP_003740202.1| ribosome recycling factor [Erwinia billingiae Eb661]
 gi|299061235|emb|CAX58344.1| Ribosome recycling factor [Erwinia billingiae Eb661]
          Length = 185

 Score =  246 bits (630), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + V+ YGS  PL Q+A+VTV + R L 
Sbjct: 7   KDAETRMEKCVEAFKNHISKIRTGRASPSILDGIMVDYYGSSTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  INVFDRSISAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K  + SED     ++DIQK+TD  IK ID+   EK+ E+M F
Sbjct: 127 SVRNVRRDANDKVKALLKDKEISEDDEHRSQDDIQKMTDVFIKKIDTALAEKEAELMDF 185


>gi|315648104|ref|ZP_07901205.1| ribosome recycling factor [Paenibacillus vortex V453]
 gi|315276750|gb|EFU40093.1| ribosome recycling factor [Paenibacillus vortex V453]
          Length = 184

 Score =  246 bits (630), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N ++RM   I  LK+D+ TLR GR +P++LD + VE YG+  PLNQ+AN++  + R L+
Sbjct: 7   KNAEERMEKAILSLKRDLATLRAGRAAPALLDRITVEYYGAPTPLNQLANISTPDSRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +A +E+ I +S++GL P  +G  +R+ VP  TEERR  LVK+   + E++K+
Sbjct: 67  IQPWDKSSLADIEKAIMKSDIGLTPANDGNQIRLVVPALTEERRTELVKMTKKFGEEAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  D +KK  K+   SED     + DIQK TD  I  +D     K+KEIM  
Sbjct: 127 AIRNIRRDANDDIKKLEKT-DISEDESRRHQEDIQKATDKFIAEVDKVLVAKEKEIMEV 184


>gi|15888703|ref|NP_354384.1| ribosome recycling factor [Agrobacterium tumefaciens str. C58]
 gi|22001938|sp|Q8UFM0|RRF_AGRT5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|15156443|gb|AAK87169.1| ribosome recycling factor [Agrobacterium tumefaciens str. C58]
          Length = 185

 Score =  246 bits (629), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 106/182 (58%), Positives = 134/182 (73%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL +IK RM   I+  K D+ +LRTGR S ++LD V ++AYGS VPLNQVAN+TV EPR
Sbjct: 4   IDLNDIKRRMDGAINAFKSDIASLRTGRASANILDPVTIDAYGSRVPLNQVANITVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V++WDK MV +V+R I ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH Y+EK
Sbjct: 64  MLGVNIWDKSMVNAVDRAIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHEYSEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+++R++RRDGMD LKK+ K G   +D        +QK+TD TI  ID    EK+KEIM
Sbjct: 124 AKVAIRHVRRDGMDGLKKAEKDGDIGQDESRGQSEKVQKMTDDTISEIDRLLAEKEKEIM 183

Query: 185 HF 186
             
Sbjct: 184 QV 185


>gi|86606512|ref|YP_475275.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
 gi|86555054|gb|ABD00012.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
          Length = 182

 Score =  246 bits (629), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 114/179 (63%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++L  I++ M   +   ++   T+RTGR + S+LD V+VE YG   PL  +A++T  +  
Sbjct: 1   MELAEIEELMSKAVQATQRSFNTVRTGRANASLLDRVQVEYYGVPTPLKALASITTPDAS 60

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L++  +D   +A++ER I  S+LGL P  +G+V+R+ +P  TEERR  L K     AE+
Sbjct: 61  TLLIQPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLNIPPLTEERRKELSKQVAKLAEE 120

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            ++S+RNIRRD +D ++K  K+G+ SED   SL+ +IQK+TD  IK ID    EK+KE+
Sbjct: 121 GRVSIRNIRRDAIDSVRKREKNGEISEDESKSLQEEIQKLTDRYIKKIDDLLAEKEKEL 179


>gi|283783956|ref|YP_003363821.1| ribosome recycling factor [Citrobacter rodentium ICC168]
 gi|282947410|emb|CBG86955.1| ribosome recycling factor [Citrobacter rodentium ICC168]
          Length = 185

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLPQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE++++
Sbjct: 67  INVFDRSLSAAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++DIQK+TD+ IK +++   +K+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKEKEISEDDDRRSQDDIQKLTDAAIKKVEAALADKEAELMQF 185


>gi|240850307|ref|YP_002971700.1| ribosome recycling factor [Bartonella grahamii as4aup]
 gi|240267430|gb|ACS51018.1| ribosome recycling factor [Bartonella grahamii as4aup]
          Length = 186

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 98/186 (52%), Positives = 130/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    + ++K RM   I+  K ++  LRTGR S S+L+ + VE+YGS V +NQVAN++V
Sbjct: 1   MNVTSIMDDLKRRMDGAITAFKHELGGLRTGRASASLLEPLTVESYGSVVHINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PEPRMLSVSVWDKTMVGAVERAIRDSGLGLNPITDGTNLRIPLPELNEERRKELVKIAHH 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+++++ R++RRDGMD+LKK  K G+  +D   SL   +QK+TD TI +ID     K+
Sbjct: 121 YAEQARVATRHVRRDGMDNLKKLEKDGEIGQDEAHSLSEKVQKLTDETIADIDKILAVKE 180

Query: 181 KEIMHF 186
            EIMH 
Sbjct: 181 SEIMHV 186


>gi|261253725|ref|ZP_05946298.1| ribosome recycling factor [Vibrio orientalis CIP 102891]
 gi|260937116|gb|EEX93105.1| ribosome recycling factor [Vibrio orientalis CIP 102891]
          Length = 185

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   QDAQERMEKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +K +D     K+KE+M  
Sbjct: 127 AIRNIRRDANGELKALLKDKEISEDEDRKGQDEIQKLTDAAVKQVDEVLAAKEKELMEV 185


>gi|329296134|ref|ZP_08253470.1| ribosome recycling factor [Plautia stali symbiont]
          Length = 185

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAETRMDKCVEAFKNTISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  INVFDRSMGPAVEKAIIASDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K  + SED     +++IQK+TD  IK++D+   EK+KE+M F
Sbjct: 127 SVRNVRRDANDKIKALLKDKEISEDDERRSQDEIQKMTDVRIKHVDAALAEKEKELMEF 185


>gi|83311594|ref|YP_421858.1| ribosome recycling factor [Magnetospirillum magneticum AMB-1]
 gi|123541757|sp|Q2W4C6|RRF_MAGMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|82946435|dbj|BAE51299.1| Ribosome recycling factor [Magnetospirillum magneticum AMB-1]
          Length = 190

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 93/179 (51%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++I  RM   +  LKK+   LR+GR S ++LD V VEAYG  +PL+Q   V V EPRML 
Sbjct: 12  KDITRRMDSAVEVLKKEFSGLRSGRASINLLDPVVVEAYGQTMPLSQCGTVGVPEPRMLT 71

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK  V +VE+ I  + LGLNP  +GQ++R+P+P   EERR  L KVA  Y+E+++I
Sbjct: 72  VQVWDKSQVKAVEKAIANAGLGLNPQADGQMIRVPIPPLNEERRKELQKVAGKYSEQARI 131

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRDGMD LKK  K G  SED +   E +IQ ITD TIK ID     K+KEIM  
Sbjct: 132 SVRNVRRDGMDTLKKMEKDGHISEDEIKKHEKEIQAITDETIKKIDEALGHKEKEIMQV 190


>gi|269960594|ref|ZP_06174966.1| Ribosome-recycling factor [Vibrio harveyi 1DA3]
 gi|269834671|gb|EEZ88758.1| Ribosome-recycling factor [Vibrio harveyi 1DA3]
          Length = 185

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE +++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     +++IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANSDLKGLLKDKEISEDEDRKAQDEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|304396647|ref|ZP_07378528.1| ribosome recycling factor [Pantoea sp. aB]
 gi|304356156|gb|EFM20522.1| ribosome recycling factor [Pantoea sp. aB]
          Length = 185

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDADTRMEKCVEAFKTTISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +  +VE+ I +S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ ++
Sbjct: 67  INVFDRSLSPAVEKAIMKSDLGLNPSSAGTDIRVPLPALTEERRKDLIKIVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K  + SED     ++++QK+TD+ IK +D+   EK+ E+M F
Sbjct: 127 SVRNVRRDANDKIKALLKDKEISEDDERRAQDEVQKMTDAYIKKVDAALSEKESELMDF 185


>gi|303228555|ref|ZP_07315383.1| ribosome recycling factor [Veillonella atypica ACS-134-V-Col7a]
 gi|303232131|ref|ZP_07318834.1| ribosome recycling factor [Veillonella atypica ACS-049-V-Sch6]
 gi|302513237|gb|EFL55276.1| ribosome recycling factor [Veillonella atypica ACS-049-V-Sch6]
 gi|302516802|gb|EFL58716.1| ribosome recycling factor [Veillonella atypica ACS-134-V-Col7a]
          Length = 186

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 81/180 (45%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  ++RM  +I  LK +  ++RTGR S ++LD V V+ YGS  P+NQVAN++V EPRM+
Sbjct: 7   MQQQEERMNKSIESLKHEFASIRTGRASTALLDKVMVDYYGSPTPINQVANISVPEPRMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ WDK M+ ++E+ I +S+LGLNP  +G  +R+ +P+ TEERR  +VKV H  AE +K
Sbjct: 67  LIAPWDKSMIGAIEKAILQSDLGLNPGNDGTAIRLTIPQLTEERRKEIVKVVHKKAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+   +ED      + IQK+TD  IK ID     K+K+++  
Sbjct: 127 VAVRNIRRDANDALKKEEKAKTITEDDAKDGLDQIQKLTDKKIKQIDELKAVKEKDVLEV 186


>gi|153831282|ref|ZP_01983949.1| ribosome recycling factor [Vibrio cholerae 623-39]
 gi|148873240|gb|EDL71375.1| ribosome recycling factor [Vibrio cholerae 623-39]
          Length = 185

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRXLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + +IQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|22127009|ref|NP_670432.1| ribosome recycling factor [Yersinia pestis KIM 10]
 gi|45442572|ref|NP_994111.1| ribosome recycling factor [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597315|ref|YP_071506.1| ribosome recycling factor [Yersinia pseudotuberculosis IP 32953]
 gi|108806520|ref|YP_650436.1| ribosome recycling factor [Yersinia pestis Antiqua]
 gi|108813113|ref|YP_648880.1| ribosome recycling factor [Yersinia pestis Nepal516]
 gi|145598947|ref|YP_001163023.1| ribosome recycling factor [Yersinia pestis Pestoides F]
 gi|149366952|ref|ZP_01888985.1| ribosome recycling factor [Yersinia pestis CA88-4125]
 gi|153949227|ref|YP_001400000.1| ribosome recycling factor [Yersinia pseudotuberculosis IP 31758]
 gi|162420181|ref|YP_001607769.1| ribosome recycling factor [Yersinia pestis Angola]
 gi|165927071|ref|ZP_02222903.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939820|ref|ZP_02228360.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166011931|ref|ZP_02232829.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211643|ref|ZP_02237678.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399872|ref|ZP_02305390.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419665|ref|ZP_02311418.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425236|ref|ZP_02316989.1| ribosome recycling factor [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167470429|ref|ZP_02335133.1| ribosome recycling factor [Yersinia pestis FV-1]
 gi|170023318|ref|YP_001719823.1| ribosome recycling factor [Yersinia pseudotuberculosis YPIII]
 gi|186896420|ref|YP_001873532.1| ribosome recycling factor [Yersinia pseudotuberculosis PB1/+]
 gi|218928215|ref|YP_002346090.1| ribosome recycling factor [Yersinia pestis CO92]
 gi|229837754|ref|ZP_04457914.1| ribosome recycling factor [Yersinia pestis Pestoides A]
 gi|229840976|ref|ZP_04461135.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843077|ref|ZP_04463227.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903556|ref|ZP_04518669.1| ribosome recycling factor [Yersinia pestis Nepal516]
 gi|270487337|ref|ZP_06204411.1| ribosome recycling factor [Yersinia pestis KIM D27]
 gi|294503064|ref|YP_003567126.1| ribosome releasing factor [Yersinia pestis Z176003]
 gi|22001943|sp|Q8ZH63|RRF_YERPE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390683|sp|Q667J2|RRF_YERPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123073218|sp|Q1CFF0|RRF_YERPN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123372696|sp|Q1CAN1|RRF_YERPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231530|sp|A4TL88|RRF_YERPP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166991561|sp|A7FFH2|RRF_YERP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238687287|sp|A9R393|RRF_YERPG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238688487|sp|B1JQG3|RRF_YERPY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238691338|sp|B2JZ31|RRF_YERPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21960056|gb|AAM86683.1|AE013914_3 ribosome releasing factor [Yersinia pestis KIM 10]
 gi|45437437|gb|AAS62988.1| ribosome recycling factor [Yersinia pestis biovar Microtus str.
           91001]
 gi|51590597|emb|CAH22238.1| ribosome recycling factor [Yersinia pseudotuberculosis IP 32953]
 gi|108776761|gb|ABG19280.1| ribosome recycling factor [Yersinia pestis Nepal516]
 gi|108778433|gb|ABG12491.1| ribosome recycling factor [Yersinia pestis Antiqua]
 gi|115346826|emb|CAL19712.1| ribosome recycling factor [Yersinia pestis CO92]
 gi|145210643|gb|ABP40050.1| ribosome recycling factor [Yersinia pestis Pestoides F]
 gi|149290566|gb|EDM40642.1| ribosome recycling factor [Yersinia pestis CA88-4125]
 gi|152960722|gb|ABS48183.1| ribosome recycling factor [Yersinia pseudotuberculosis IP 31758]
 gi|162352996|gb|ABX86944.1| ribosome recycling factor [Yersinia pestis Angola]
 gi|165912223|gb|EDR30860.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920967|gb|EDR38191.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989197|gb|EDR41498.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207414|gb|EDR51894.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962406|gb|EDR58427.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167050580|gb|EDR61988.1| ribosome recycling factor [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055636|gb|EDR65420.1| ribosome recycling factor [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169749852|gb|ACA67370.1| ribosome recycling factor [Yersinia pseudotuberculosis YPIII]
 gi|186699446|gb|ACC90075.1| ribosome recycling factor [Yersinia pseudotuberculosis PB1/+]
 gi|229679326|gb|EEO75429.1| ribosome recycling factor [Yersinia pestis Nepal516]
 gi|229689953|gb|EEO82012.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697342|gb|EEO87389.1| ribosome recycling factor [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704131|gb|EEO91143.1| ribosome recycling factor [Yersinia pestis Pestoides A]
 gi|262361101|gb|ACY57822.1| ribosome releasing factor [Yersinia pestis D106004]
 gi|262365342|gb|ACY61899.1| ribosome releasing factor [Yersinia pestis D182038]
 gi|270335841|gb|EFA46618.1| ribosome recycling factor [Yersinia pestis KIM D27]
 gi|294353523|gb|ADE63864.1| ribosome releasing factor [Yersinia pestis Z176003]
 gi|320014181|gb|ADV97752.1| ribosome recycling factor [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 185

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L 
Sbjct: 7   KDAEVRMEKCLEAFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  LTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+    K+ E+M F
Sbjct: 127 SIRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKKVDAALAVKEAELMDF 185


>gi|86610317|ref|YP_479079.1| ribosome recycling factor [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123500677|sp|Q2JHW2|RRF_SYNJB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|86558859|gb|ABD03816.1| ribosome recycling factor [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 182

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 116/179 (64%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++L  I++ M   +   ++   T+RTGR + S+LD ++VE YG   PL  +A++T  +  
Sbjct: 1   MELAEIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSS 60

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L++  +D   +A++ER I  S+LGL P  +G+V+R+ +P  TEERR  L K     AE+
Sbjct: 61  TLLIQPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEE 120

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            ++S+RNIRRDG+D ++K  K+G+ SED   SL++DIQK+TD  IK ID    EK+KE+
Sbjct: 121 GRVSIRNIRRDGIDSVRKREKNGELSEDESKSLQDDIQKLTDRYIKKIDELLAEKEKEL 179


>gi|330830752|ref|YP_004393704.1| ribosome-recycling factor [Aeromonas veronii B565]
 gi|328805888|gb|AEB51087.1| Ribosome-recycling factor [Aeromonas veronii B565]
          Length = 185

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + KDRMG ++  LK  M  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L 
Sbjct: 7   NDAKDRMGKSVEALKTQMSKIRTGRAHPSLLDGIQVEYYGAATPLKQLANVVAEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++D+ M+ +VE+ I  S+LGLNP   GQ LR+P+P  TEERR  L K+  A AE +++
Sbjct: 67  ISIFDRSMIQAVEKAILTSDLGLNPSSNGQTLRVPLPPLTEERRRDLTKIVRAEAENARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     + +IQK+TDS IK +D     K+KE+M  
Sbjct: 127 AVRNIRRDANADLKALLKDKEISEDDDRRAQEEIQKLTDSYIKLVDEALAVKEKELMEI 185


>gi|145300058|ref|YP_001142899.1| ribosome recycling factor [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166230408|sp|A4SQH9|RRF_AERS4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|142852830|gb|ABO91151.1| ribosome recycling factor [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 185

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + KDRM  ++  LK  M  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L 
Sbjct: 7   NDAKDRMAKSVESLKTQMSKIRTGRAHPSLLDGIQVEYYGAATPLKQLANVVAEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++D+ M+ +VE+ I  S+LGLNP   GQ LR+P+P  TEERR  L K+  A AE +++
Sbjct: 67  ISIFDRSMIQAVEKAILTSDLGLNPSSNGQTLRVPLPPLTEERRRDLTKIVRAEAEGARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     + +IQK+TDS IK +D     K+KE+M  
Sbjct: 127 AVRNIRRDANADLKALLKDKEISEDDDRRAQEEIQKLTDSFIKLVDDALAAKEKELMEI 185


>gi|186476093|ref|YP_001857563.1| ribosome recycling factor [Burkholderia phymatum STM815]
 gi|238691306|sp|B2JIC3|RRF_BURP8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|184192552|gb|ACC70517.1| ribosome recycling factor [Burkholderia phymatum STM815]
          Length = 186

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++   K D+  +RTGR    +LD ++V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGAEQKMQRSLDAFKNDLSKIRTGRAHTGLLDHIQVDYYGSPVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MVA VE+ I ES+LGLNP   G V+R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKKMVAVVEKAIRESDLGLNPASHGDVIRVPMPPLTEERRKELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVQTKEGEIMTV 186


>gi|296446143|ref|ZP_06888091.1| ribosome recycling factor [Methylosinus trichosporium OB3b]
 gi|296256337|gb|EFH03416.1| ribosome recycling factor [Methylosinus trichosporium OB3b]
          Length = 186

 Score =  246 bits (628), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 92/186 (49%), Positives = 129/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+Q  DL  +K RM   ++ LK ++  LRTGR S  +L+ + VEAYG   PLNQVA ++V
Sbjct: 1   MSQTFDLPELKRRMQGAMATLKHELGGLRTGRASAGLLEPIHVEAYGQSTPLNQVATISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L V VWDK +V++V++ I +SNLGL P +EGQVLRI  PE  E+RR  LVKVAH 
Sbjct: 61  PEPRLLSVQVWDKGLVSAVDKAIRDSNLGLMPTIEGQVLRIRTPELNEQRRKELVKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE++++SVR++RRDG+D LKK +K     ED     E ++QK TD  +++ID+   +K+
Sbjct: 121 YAEEARVSVRHVRRDGIDILKKLQKDHALPEDDAKRHETEVQKATDEAVRDIDAALAQKE 180

Query: 181 KEIMHF 186
           KEI+  
Sbjct: 181 KEILQV 186


>gi|194015089|ref|ZP_03053706.1| ribosome recycling factor [Bacillus pumilus ATCC 7061]
 gi|194014115|gb|EDW23680.1| ribosome recycling factor [Bacillus pumilus ATCC 7061]
          Length = 185

 Score =  246 bits (628), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M   +    +++ T+R GR + S+LD V V+ YG+  PLNQ+A++TV E RML
Sbjct: 6   LNQTKEKMEKAVQAYGRELATVRAGRANASLLDKVTVDYYGAQTPLNQIASITVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+ I +S+LG+ P  +G V+RI +P  TEERR  LVKV   Y+E++K
Sbjct: 66  IITPYDKTAIGDIEKSIQKSDLGITPTSDGNVIRIAIPALTEERRKELVKVVRKYSEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G+ +ED + S   D+QK+TD  +  ID   ++K+KEIM  
Sbjct: 126 VAVRNVRRDANDELKKLEKNGEITEDELRSSTEDVQKLTDEYVAKIDDVTKDKEKEIMEV 185


>gi|254294076|ref|YP_003060099.1| ribosome recycling factor [Hirschia baltica ATCC 49814]
 gi|254042607|gb|ACT59402.1| ribosome recycling factor [Hirschia baltica ATCC 49814]
          Length = 184

 Score =  246 bits (628), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 89/182 (48%), Positives = 132/182 (72%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID+++++ RM   ++ LK +   LRTGR S ++LD V V+AYG+  PL QVA+++V EPR
Sbjct: 3   IDMKDLERRMEGAVASLKTEFSGLRTGRASVNLLDTVMVQAYGASTPLAQVASISVPEPR 62

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V+VWDK +V + ++ I E+ LGLNP+++GQ LRIP+P   EERR  L K+A  YAE 
Sbjct: 63  MLAVNVWDKTVVGAADKAIREAGLGLNPVMDGQNLRIPIPPLNEERRAELAKLAGKYAES 122

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD LKK  K G+ S+D   SLE+D+QK+TD  I ++D+  + K++EIM
Sbjct: 123 ARVAIRNVRRDGMDILKKMEKDGEISKDEQKSLEDDVQKLTDKIISSVDASVKSKEEEIM 182

Query: 185 HF 186
             
Sbjct: 183 QV 184


>gi|163868104|ref|YP_001609308.1| ribosome recycling factor [Bartonella tribocorum CIP 105476]
 gi|189044045|sp|A9ISK9|RRF_BART1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|161017755|emb|CAK01313.1| Ribosome recycling factor [Bartonella tribocorum CIP 105476]
          Length = 186

 Score =  246 bits (628), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 98/186 (52%), Positives = 129/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    + ++K RM   I   K ++  LRTGR S S+L+ + VE+YGS V +NQVAN++V
Sbjct: 1   MNVASIMDDLKRRMDGAIVAFKHELGGLRTGRASASLLEPLTVESYGSVVHINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PEPRMLFVSVWDKTMVGAVERAIRDSGLGLNPITDGTNLRIPLPELNEERRKELVKIAHH 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+++++ R++RRDGMD+LKK  K G+  +D   SL   +QK+TD TI +ID     K+
Sbjct: 121 YAEQARVATRHVRRDGMDNLKKLEKDGEIGQDEAHSLSEKVQKLTDETIADIDKILAVKE 180

Query: 181 KEIMHF 186
            EIMH 
Sbjct: 181 SEIMHV 186


>gi|311030097|ref|ZP_07708187.1| ribosome recycling factor [Bacillus sp. m3-13]
          Length = 185

 Score =  246 bits (628), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   KDRM   +    +++ T+R GR S ++LD V V+ YG+  P+NQ+A++ V E R+L
Sbjct: 6   ITQTKDRMEKAVQAYSRELATIRAGRASAALLDKVTVDYYGAPTPVNQLASLNVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +DK  +  +E+ I +++LGLNP  +G V+RI +P  TEERR  LVK     +E++K
Sbjct: 66  VVQPYDKTSLGDIEKAIIKADLGLNPSNDGTVIRISIPALTEERRKELVKQIKKISEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +RNIRRDG D LKK  K+G+ +ED +    +DIQK TD+ I  +D+  +EK+KEIM  
Sbjct: 126 VGIRNIRRDGNDDLKKLEKNGEITEDELRGYTDDIQKQTDAFIAKVDTVTKEKEKEIMEV 185


>gi|300724792|ref|YP_003714117.1| ribosome releasing factor [Xenorhabdus nematophila ATCC 19061]
 gi|297631334|emb|CBJ92029.1| ribosome releasing factor [Xenorhabdus nematophila ATCC 19061]
          Length = 185

 Score =  246 bits (628), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR SPS+LD + VE YGS  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSVEALKNQISKVRTGRASPSLLDGISVEYYGSATPLRQIANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M A+VE+ I  S+LGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  ITVFDRSMTAAVEKAIMASDLGLNPASAGTIIRVPLPPLTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  D +K   K  + SED     +++IQK+TDS IK +D     K+ E+M F
Sbjct: 127 SIRNIRRDANDKVKALLKEKEISEDEERRSQDEIQKLTDSFIKKVDEALANKETELMDF 185


>gi|170768435|ref|ZP_02902888.1| ribosome releasing factor [Escherichia albertii TW07627]
 gi|170122539|gb|EDS91470.1| ribosome releasing factor [Escherichia albertii TW07627]
          Length = 185

 Score =  246 bits (628), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE++++
Sbjct: 67  INVFDRSMSAAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++D+QK+TD+ IK I++   +K+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKEKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF 185


>gi|86749942|ref|YP_486438.1| ribosome recycling factor [Rhodopseudomonas palustris HaA2]
 gi|123292529|sp|Q2IW83|RRF_RHOP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|86572970|gb|ABD07527.1| ribosome recycling factor [Rhodopseudomonas palustris HaA2]
          Length = 187

 Score =  246 bits (628), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 93/185 (50%), Positives = 131/185 (70%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           ++  D+ ++K RM      L+ ++  LRTGR + SML+ V+V+AYG+H+PLNQ+A VTV 
Sbjct: 3   SEKFDINDLKRRMQGASQALQHELGGLRTGRAAASMLEPVQVDAYGTHMPLNQLATVTVP 62

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPR+L V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  ++RR  LVKVAH Y
Sbjct: 63  EPRLLSVQVWDKSMVRAVEKAIVDSNLGLSPATEGQVLRLRIPELNQDRRKELVKVAHKY 122

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE ++++VR++RRDG+D +KK  KS + SED    L+ ++QK TDS I  ID     K+K
Sbjct: 123 AEAARVAVRHVRRDGLDTIKKLEKSHEISEDDQKRLDQEVQKATDSAISEIDQLLASKEK 182

Query: 182 EIMHF 186
           EI+  
Sbjct: 183 EILTV 187


>gi|77919514|ref|YP_357329.1| ribosome recycling factor [Pelobacter carbinolicus DSM 2380]
 gi|123573931|sp|Q3A398|RRF_PELCD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|77545597|gb|ABA89159.1| ribosome recycling factor [Pelobacter carbinolicus DSM 2380]
          Length = 185

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +  M   +  LKKDM  +RTGR S S+LD V V+ YG+  PLNQV  + V EPR++
Sbjct: 6   IKKARSGMDKAVESLKKDMTKVRTGRASTSLLDDVMVDYYGTPTPLNQVGTLAVPEPRLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K+++A +ER I +++LGLNP  +G ++R+ +P  TEERR  + KV     E +K
Sbjct: 66  TIQPWEKKLLADIERAIFKADLGLNPTSDGNLIRLVIPPMTEERRKEMGKVVRKMGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VR+ RRD  D +KK  K+ + SED +   E +IQ +TDS +  ID    +K+KEIM  
Sbjct: 126 VGVRSARRDANDGMKKLEKNKEISEDDLKRGEKEIQDVTDSYVAKIDDLVSQKEKEIMEI 185


>gi|15642255|ref|NP_231888.1| ribosome recycling factor [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|147673161|ref|YP_001217772.1| ribosome recycling factor [Vibrio cholerae O395]
 gi|153803002|ref|ZP_01957588.1| ribosome recycling factor [Vibrio cholerae MZO-3]
 gi|153827697|ref|ZP_01980364.1| ribosome recycling factor [Vibrio cholerae MZO-2]
 gi|227082381|ref|YP_002810932.1| ribosome recycling factor [Vibrio cholerae M66-2]
 gi|229507669|ref|ZP_04397174.1| ribosome recycling factor [Vibrio cholerae BX 330286]
 gi|229512136|ref|ZP_04401615.1| ribosome recycling factor [Vibrio cholerae B33]
 gi|229519271|ref|ZP_04408714.1| ribosome recycling factor [Vibrio cholerae RC9]
 gi|229522203|ref|ZP_04411620.1| ribosome recycling factor [Vibrio cholerae TM 11079-80]
 gi|229524260|ref|ZP_04413665.1| ribosome recycling factor [Vibrio cholerae bv. albensis VL426]
 gi|229528740|ref|ZP_04418130.1| ribosome recycling factor [Vibrio cholerae 12129(1)]
 gi|229607173|ref|YP_002877821.1| ribosome recycling factor [Vibrio cholerae MJ-1236]
 gi|254286071|ref|ZP_04961032.1| ribosome recycling factor [Vibrio cholerae AM-19226]
 gi|254849387|ref|ZP_05238737.1| ribosome recycling factor [Vibrio cholerae MO10]
 gi|255747047|ref|ZP_05420992.1| ribosome recycling factor [Vibrio cholera CIRS 101]
 gi|262161409|ref|ZP_06030519.1| ribosome recycling factor [Vibrio cholerae INDRE 91/1]
 gi|297580900|ref|ZP_06942825.1| ribosome recycling factor [Vibrio cholerae RC385]
 gi|298500368|ref|ZP_07010173.1| ribosome recycling factor [Vibrio cholerae MAK 757]
 gi|22001952|sp|Q9KPV5|RRF_VIBCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|172047609|sp|A5F618|RRF_VIBC3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809542|sp|C3LQ29|RRF_VIBCM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|9656818|gb|AAF95401.1| ribosome recycling factor [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|124121445|gb|EAY40188.1| ribosome recycling factor [Vibrio cholerae MZO-3]
 gi|146315044|gb|ABQ19583.1| ribosome recycling factor [Vibrio cholerae O395]
 gi|149737829|gb|EDM52734.1| ribosome recycling factor [Vibrio cholerae MZO-2]
 gi|150423981|gb|EDN15921.1| ribosome recycling factor [Vibrio cholerae AM-19226]
 gi|227010269|gb|ACP06481.1| ribosome recycling factor [Vibrio cholerae M66-2]
 gi|227014153|gb|ACP10363.1| ribosome recycling factor [Vibrio cholerae O395]
 gi|229332514|gb|EEN98000.1| ribosome recycling factor [Vibrio cholerae 12129(1)]
 gi|229337841|gb|EEO02858.1| ribosome recycling factor [Vibrio cholerae bv. albensis VL426]
 gi|229341128|gb|EEO06133.1| ribosome recycling factor [Vibrio cholerae TM 11079-80]
 gi|229343960|gb|EEO08935.1| ribosome recycling factor [Vibrio cholerae RC9]
 gi|229352101|gb|EEO17042.1| ribosome recycling factor [Vibrio cholerae B33]
 gi|229355174|gb|EEO20095.1| ribosome recycling factor [Vibrio cholerae BX 330286]
 gi|229369828|gb|ACQ60251.1| ribosome recycling factor [Vibrio cholerae MJ-1236]
 gi|254845092|gb|EET23506.1| ribosome recycling factor [Vibrio cholerae MO10]
 gi|255735449|gb|EET90849.1| ribosome recycling factor [Vibrio cholera CIRS 101]
 gi|262028720|gb|EEY47374.1| ribosome recycling factor [Vibrio cholerae INDRE 91/1]
 gi|297534726|gb|EFH73562.1| ribosome recycling factor [Vibrio cholerae RC385]
 gi|297541061|gb|EFH77115.1| ribosome recycling factor [Vibrio cholerae MAK 757]
 gi|327484773|gb|AEA79180.1| Ribosome recycling factor [Vibrio cholerae LMA3894-4]
          Length = 185

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRELTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + +IQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|261211375|ref|ZP_05925663.1| ribosome recycling factor [Vibrio sp. RC341]
 gi|260839330|gb|EEX65956.1| ribosome recycling factor [Vibrio sp. RC341]
          Length = 185

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQ+ANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQIANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+++   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRDLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + DIQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKGLLKDKEISEDDERRAQEDIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|227821900|ref|YP_002825870.1| ribosome recycling factor [Sinorhizobium fredii NGR234]
 gi|254809525|sp|C3MBQ5|RRF_RHISN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|227340899|gb|ACP25117.1| ribosome recycling factor [Sinorhizobium fredii NGR234]
          Length = 186

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 107/186 (57%), Positives = 136/186 (73%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ++L+ +K RM   I+  K D+ +LRTGR S ++LD V VEAYGS +PLNQVAN+ V
Sbjct: 1   MSEGVELKELKRRMDGAIAAFKHDIASLRTGRASANVLDPVTVEAYGSRMPLNQVANIMV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +V+R I ESNLGLNPI++GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLSVSVWDKTMVGAVDRAIRESNLGLNPIIDGQNLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSK++VR++RRDGMD LKK+ K G   +D   +    +QK+TD  I  ID    EK+
Sbjct: 121 YAEKSKVAVRHVRRDGMDGLKKAEKDGDIGQDESRAQSERVQKMTDEVISEIDRLLAEKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMQV 186


>gi|157692331|ref|YP_001486793.1| ribosome recycling factor [Bacillus pumilus SAFR-032]
 gi|166991553|sp|A8FDB6|RRF_BACP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157681089|gb|ABV62233.1| peptide chain release factor RF4 [Bacillus pumilus SAFR-032]
          Length = 185

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M   +    +++ T+R GR + S+LD V V+ YG+  PLNQ+A++TV E RML
Sbjct: 6   LNQTKEKMEKAVQAYGRELATVRAGRANASLLDKVTVDYYGAQTPLNQIASITVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+ I +S+LG+ P  +G V+RI +P  TEERR  LVKV   Y+E++K
Sbjct: 66  IITPYDKTAIGDIEKSIQKSDLGITPTSDGNVIRIAIPALTEERRKELVKVVRKYSEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G+ +ED + S   D+QK+TD  +  ID   ++K+KEIM  
Sbjct: 126 VAVRNVRRDANDELKKLEKNGEITEDELRSSTEDVQKLTDEYVAKIDDVMKDKEKEIMEV 185


>gi|83592924|ref|YP_426676.1| ribosome recycling factor [Rhodospirillum rubrum ATCC 11170]
 gi|83575838|gb|ABC22389.1| ribosome recycling factor [Rhodospirillum rubrum ATCC 11170]
          Length = 191

 Score =  246 bits (628), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 84/179 (46%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            +++ RM   +  L+KD   LRTGR S S+LD V VEAYG  +PL QVA V+V EPRM+ 
Sbjct: 13  ADLRHRMDTAVEVLRKDFAGLRTGRASTSLLDSVMVEAYGQAMPLAQVATVSVPEPRMIS 72

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWD+ M  +V++ I ++ LGLNP  +GQ++R+P+P   EERR  L KVA  YAE++++
Sbjct: 73  VQVWDRGMAKAVDKAIRDAGLGLNPASDGQLIRVPIPPLNEERRTELTKVAGKYAEQTRV 132

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRDGMD LKK  K    S+D       ++Q +TD TI+ +D     K++EIM  
Sbjct: 133 AVRNVRRDGMDQLKKMEKDSAISQDEHKKFGAEVQALTDETIRRLDEALAHKEQEIMQV 191


>gi|323526485|ref|YP_004228638.1| ribosome recycling factor [Burkholderia sp. CCGE1001]
 gi|323383487|gb|ADX55578.1| ribosome recycling factor [Burkholderia sp. CCGE1001]
          Length = 186

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGAEQKMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV  VE+ I ES+LGLNP  +G V+R+P+P  TEERR  L KV  + AE +K+
Sbjct: 68  VQPWEKKMVQVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVATKEAEIMTV 186


>gi|117622457|ref|YP_851370.1| ribosome recycling factor [Escherichia coli APEC O1]
 gi|309787154|ref|ZP_07681766.1| ribosome recycling factor [Shigella dysenteriae 1617]
 gi|115511581|gb|ABI99655.1| ribosome releasing factor [Escherichia coli APEC O1]
 gi|308924732|gb|EFP70227.1| ribosome recycling factor [Shigella dysenteriae 1617]
 gi|332097962|gb|EGJ02935.1| ribosome recycling factor [Shigella dysenteriae 155-74]
          Length = 173

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 73/173 (42%), Positives = 111/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D+
Sbjct: 1   MDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+R
Sbjct: 61  SMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SED     ++D+QK+TD+ IK I++   +K+ E+M F
Sbjct: 121 RDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF 173


>gi|308048672|ref|YP_003912238.1| ribosome recycling factor [Ferrimonas balearica DSM 9799]
 gi|307630862|gb|ADN75164.1| ribosome recycling factor [Ferrimonas balearica DSM 9799]
          Length = 185

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ KDRM  ++   +  M  +RTGR  PS+LD + V  YG   PL QV NVT  + R L 
Sbjct: 7   KDAKDRMVKSVEATQTQMSKVRTGRAHPSLLDSIMVSYYGVDTPLKQVGNVTTEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+DK M+ +VE+ I  S+LGLNP   G ++RIP+P  TEERR  LVKV  A AE  ++
Sbjct: 67  VTVFDKSMIQAVEKAIMASDLGLNPNSAGTMIRIPLPPLTEERRRDLVKVVRAEAEHGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    +K   K  + SED     E+DIQK+TD  +K ID+   +K+KE+M  
Sbjct: 127 AVRNIRRDANSDIKALEKEKEISEDDARRGEDDIQKLTDQYVKQIDAILADKEKELMEV 185


>gi|292898542|ref|YP_003537911.1| ribosome recycling factor [Erwinia amylovora ATCC 49946]
 gi|291198390|emb|CBJ45497.1| ribosome recycling factor [Erwinia amylovora ATCC 49946]
          Length = 185

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + V+ YGS  PL Q+A+VTV + R L 
Sbjct: 7   KDAETRMEKCVEAFKNHISKIRTGRASPSILDGIMVDYYGSPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  INVFDRSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D LK   K  + SED     + D+QK+TD  IK +D+   +K+ E+M F
Sbjct: 127 SVRNVRRDANDKLKALLKDKEISEDDDRRAQEDVQKMTDIFIKKVDASLADKETELMDF 185


>gi|90423939|ref|YP_532309.1| ribosome recycling factor [Rhodopseudomonas palustris BisB18]
 gi|122476317|sp|Q215E6|RRF_RHOPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|90105953|gb|ABD87990.1| ribosome recycling factor [Rhodopseudomonas palustris BisB18]
          Length = 187

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 95/182 (52%), Positives = 129/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+  +K RM      LK ++  LRTGR + SML+ V+VEAYGSH+PLNQ+A V+V EPR
Sbjct: 6   FDINELKRRMQGATQSLKHELGGLRTGRAAASMLEPVQVEAYGSHMPLNQLATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWD+ MV +VE+ I +SNLGL+P  EGQVLR+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDRSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K+ + SED    L +++QK TD+TI  +D     K+KEI+
Sbjct: 126 TRVAVRHVRRDGLDTLKKLEKNSEISEDDQERLAHEVQKATDATILEVDQLLAAKEKEIL 185

Query: 185 HF 186
             
Sbjct: 186 TV 187


>gi|138894772|ref|YP_001125225.1| ribosome recycling factor [Geobacillus thermodenitrificans NG80-2]
 gi|196247605|ref|ZP_03146307.1| ribosome recycling factor [Geobacillus sp. G11MC16]
 gi|166230789|sp|A4IMC6|RRF_GEOTN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|134266285|gb|ABO66480.1| Ribosome recycling factor [Geobacillus thermodenitrificans NG80-2]
 gi|196212389|gb|EDY07146.1| ribosome recycling factor [Geobacillus sp. G11MC16]
          Length = 185

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  K++M   +    +++ T+R GR +  +L+ V V+ YG   P+NQ+A ++V E RML
Sbjct: 6   IQQAKEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E+ I  S+LG+ P  +G V+R+ +P  TEERR  L K+   Y+E++K
Sbjct: 66  VIQPYDKSVIKEMEKAILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+ + +ED + S  +++QK+TDS I  ID+  +EK+KE+M  
Sbjct: 126 VAVRNIRRDANDELKKLEKNSEITEDELRSYTDEVQKLTDSHIAKIDAITKEKEKEVMEV 185


>gi|49474293|ref|YP_032335.1| ribosome recycling factor [Bartonella quintana str. Toulouse]
 gi|60390253|sp|Q6FZN3|RRF_BARQU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|49239797|emb|CAF26187.1| Ribosome recycling factor [Bartonella quintana str. Toulouse]
          Length = 186

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 100/186 (53%), Positives = 131/186 (70%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN +  + ++K RM   IS  + ++  LRTGR S S+L+ + VEAYGS V +NQVAN++V
Sbjct: 1   MNVLSIMDDLKRRMDGAISAFQHELGGLRTGRASASLLEPLTVEAYGSVVHINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PEPRMLSVSVWDKTMVGAVERAIRDSGLGLNPITDGMNLRIPLPELNEERRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+++++ R++RRDGMD+LKK  K G+ S+D    L   +QK+TD TI NID     K+
Sbjct: 121 YAEQARVATRHVRRDGMDNLKKLEKEGEISQDEAHGLSEKVQKLTDETIANIDKILAVKE 180

Query: 181 KEIMHF 186
            EIMH 
Sbjct: 181 SEIMHV 186


>gi|17546126|ref|NP_519528.1| ribosome recycling factor [Ralstonia solanacearum GMI1000]
 gi|22001940|sp|Q8XZI8|RRF_RALSO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|17428422|emb|CAD15109.1| probable ribosome recycling factor (ribosome-releasing factor)
           (rrf) protein [Ralstonia solanacearum GMI1000]
          Length = 186

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+ + + R + 
Sbjct: 8   KSAEQKMQKSIDAFKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVANLGLADARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV++VER I +++LGLNP   G+V+R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKKMVSAVERAIRDADLGLNPATMGEVIRVPMPPLTEERRKELTKVVKSEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  +  KK  K    SED     ++++QK+TD  +  +D    EK KEIM  
Sbjct: 128 AVRNVRRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDRFVAEVDKLVAEKDKEIMTV 186


>gi|296101340|ref|YP_003611486.1| ribosome releasing factor [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055799|gb|ADF60537.1| ribosome releasing factor [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 185

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMEKCVEAFKTQISKIRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDTRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  INVFDRSMGPAVEKAIMASDLGLNPSSAGADIRVPLPPLTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K  + SED     ++DIQK+TD+ IK ID+   +K+ E+M F
Sbjct: 127 SVRNVRRDANDKVKALLKEKEISEDDDRRSQDDIQKMTDAAIKKIDAALADKEAELMQF 185


>gi|291616348|ref|YP_003519090.1| Frr [Pantoea ananatis LMG 20103]
 gi|291151378|gb|ADD75962.1| Frr [Pantoea ananatis LMG 20103]
          Length = 185

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDADTRMDKCVEAFKTTISKVRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ ++
Sbjct: 67  INVFDRSLGPAVEKAIMASDLGLNPNSAGSDIRVPLPALTEERRKDLIKIVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K  + SED     +++IQK+TD+ IK +D+   EK+ E+M F
Sbjct: 127 SVRNVRRDANDKIKALLKDKEISEDDERRSQDEIQKMTDAHIKKVDAALAEKEAELMDF 185


>gi|312883811|ref|ZP_07743530.1| ribosome recycling factor [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368560|gb|EFP96093.1| ribosome recycling factor [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 185

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   QDAQERMEKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +K +D     K+KE+M  
Sbjct: 127 AIRNIRRDANGDLKALLKEKEISEDEDRKGQDEIQKLTDAAVKQVDEVLAAKEKELMEV 185


>gi|326794438|ref|YP_004312258.1| ribosome-recycling factor [Marinomonas mediterranea MMB-1]
 gi|326545202|gb|ADZ90422.1| Ribosome-recycling factor [Marinomonas mediterranea MMB-1]
          Length = 185

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 71/186 (38%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++  L++ ++RM   ++ ++     +RTGR  PS+LD +KV  YGS  PL+QVAN+TV
Sbjct: 2   INEI--LKDAEERMSKAVNSVEVSFNKIRTGRAHPSLLDPIKVNYYGSPTPLSQVANITV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L +S W+  +V  +E+ I +S+LGLNP   G ++RIP+P  TEE R    K A +
Sbjct: 60  EDARTLGISPWEGNLVPEIEKAIMKSDLGLNPSTTGNLIRIPMPALTEETRGNYAKQARS 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  +I++RNIRRD   +LK   K  + SED     ++ +QK+TD  +  ++     K+
Sbjct: 120 EAENGRIAIRNIRRDANGNLKDLTKEKEISEDEERRGQDQVQKLTDKYVAKVEERLAAKE 179

Query: 181 KEIMHF 186
           K++M  
Sbjct: 180 KDLMAI 185


>gi|332532243|ref|ZP_08408124.1| ribosome recycling factor [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038341|gb|EGI74786.1| ribosome recycling factor [Pseudoalteromonas haloplanktis ANT/505]
          Length = 185

 Score =  245 bits (627), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  +++ L   +  +RTGR  P++LD + V  YG+  PLNQVANVT+ + R L 
Sbjct: 7   KDAQARMQKSVTALGSQLSKIRTGRAHPAILDGIMVSYYGAPTPLNQVANVTIEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           + V+DK +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+K+     E  ++
Sbjct: 67  IGVFDKSLAQAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKIVRGEVEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K  + SED     ++ IQK+TD  IK +D+    K+ E+M  
Sbjct: 127 AIRNIRRDANGDVKGLLKDKEISEDEARQSDDAIQKLTDKFIKEMDTLLAAKEAELMEI 185


>gi|258627353|ref|ZP_05722137.1| Ribosome-recycling factor [Vibrio mimicus VM603]
 gi|258580391|gb|EEW05356.1| Ribosome-recycling factor [Vibrio mimicus VM603]
          Length = 173

 Score =  245 bits (626), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/173 (42%), Positives = 108/173 (62%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L ++V+D+
Sbjct: 1   MEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVVAEDARTLAITVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
           ++   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  +++VRNIR
Sbjct: 61  DLTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  + LK   K  + SED     + DIQK+TD+ +K ID     K+KE+M  
Sbjct: 121 RDANNDLKGLLKDKEISEDDERRAQEDIQKLTDAAVKKIDDVLAAKEKELMEV 173


>gi|293394705|ref|ZP_06638997.1| ribosome recycling factor [Serratia odorifera DSM 4582]
 gi|291422831|gb|EFE96068.1| ribosome recycling factor [Serratia odorifera DSM 4582]
          Length = 173

 Score =  245 bits (626), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/173 (42%), Positives = 113/173 (65%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   K  +  +RTGR SPS+LD + VE YG+  PL Q+A++TV + R L ++V+D+
Sbjct: 1   MEKSVEAFKNQISKIRTGRASPSILDGIMVEYYGAATPLRQLASITVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            +  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++SVRN+R
Sbjct: 61  SLSPAVEKAIMSSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+KE+M F
Sbjct: 121 RDANDKIKALLKDKEISEDEERRAQDDVQKMTDAYIKLVDAALADKEKELMEF 173


>gi|260913177|ref|ZP_05919659.1| ribosome recycling factor [Pasteurella dagmatis ATCC 43325]
 gi|260632764|gb|EEX50933.1| ribosome recycling factor [Pasteurella dagmatis ATCC 43325]
          Length = 185

 Score =  245 bits (626), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++   K  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L 
Sbjct: 7   KDTQARMEKSLETFKNHIAKVRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ KI
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEAEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     +++IQKITD  +K +D    +K+KE+M F
Sbjct: 127 AVRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDLYVKKVDEVLADKEKELMDF 185


>gi|307293418|ref|ZP_07573264.1| ribosome recycling factor [Sphingobium chlorophenolicum L-1]
 gi|306881484|gb|EFN12700.1| ribosome recycling factor [Sphingobium chlorophenolicum L-1]
          Length = 185

 Score =  245 bits (626), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 93/180 (51%), Positives = 124/180 (68%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  +++ RM   +  LK D+  LRTGR +  +LD V VE YG+H+PLNQVA V+  EPR
Sbjct: 4   YDKADLERRMHGAVESLKGDLAGLRTGRANIQLLDPVTVEVYGAHMPLNQVATVSAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V VWDK  V   ++ I  + LGLNPIV+GQ LR+P+P+ TEERR  L K+A  YAE 
Sbjct: 64  MLSVQVWDKTNVGPCDKAIRSAGLGLNPIVDGQTLRLPIPDLTEERRKELAKLASKYAEG 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++I+VRN+RRDGMD LK   K G+ SED    LE ++Q++TDSTI +ID+    K+KEI+
Sbjct: 124 ARIAVRNVRRDGMDSLKVDEKKGEISEDERKRLETEVQRLTDSTIADIDAVTAAKEKEIL 183


>gi|217979929|ref|YP_002364076.1| ribosome recycling factor [Methylocella silvestris BL2]
 gi|254809521|sp|B8EMN5|RRF_METSB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|217505305|gb|ACK52714.1| ribosome recycling factor [Methylocella silvestris BL2]
          Length = 186

 Score =  245 bits (626), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 92/186 (49%), Positives = 129/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   DL +IK RM   I+ LK ++  LRTGR S S+++ V VEAYG  +PLNQVA ++V
Sbjct: 1   MSAEFDLADIKRRMQGAIATLKHELGGLRTGRASASLIEPVNVEAYGQTMPLNQVATISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML V VWDK MV +V++ I  +NLGL+P VEGQVLRI +PE  E+RR  + KVAH 
Sbjct: 61  PEPRMLSVQVWDKGMVGAVDKAIRNANLGLSPTVEGQVLRIRIPELNEQRRKEMAKVAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE +++++R++RRDG+D LK+  K  + SED     E+++QK TD  + ++DS    K+
Sbjct: 121 YAEDARVAIRHVRRDGIDVLKRLLKDKEISEDDEKRHESEVQKATDQCVADVDSALVAKE 180

Query: 181 KEIMHF 186
           +EIM  
Sbjct: 181 REIMQV 186


>gi|325971044|ref|YP_004247235.1| ribosome-recycling factor [Spirochaeta sp. Buddy]
 gi|324026282|gb|ADY13041.1| Ribosome-recycling factor [Spirochaeta sp. Buddy]
          Length = 184

 Score =  245 bits (626), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 87/186 (46%), Positives = 127/186 (68%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M QV+D    + +M  ++  L KD   LRTGR S S+LD ++V+ YGS  P+NQVA V+V
Sbjct: 1   MQQVLD--TCESKMLKSLESLSKDFAGLRTGRASASLLDKIRVDYYGSETPINQVATVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+V+  WDK +++++E+ I +S+LGL P  +G+++R+  P   EERR  LVK A  
Sbjct: 59  PEARMIVIQPWDKSVLSAIEKAILKSDLGLPPNNDGKLIRLNFPPLNEERRKQLVKSAKN 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+S++++RN+RR+ MD LKK +KSG  SED +   E+ IQK+TDS I  I+S  +EK+
Sbjct: 119 TAEQSRVAMRNVRREAMDELKKLQKSGDISEDELKDAESKIQKMTDSYITQINSLSDEKE 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEI 184


>gi|256113719|ref|ZP_05454523.1| ribosome recycling factor [Brucella melitensis bv. 3 str. Ether]
 gi|265995074|ref|ZP_06107631.1| ribosome recycling factor rrf [Brucella melitensis bv. 3 str.
           Ether]
 gi|262766187|gb|EEZ11976.1| ribosome recycling factor rrf [Brucella melitensis bv. 3 str.
           Ether]
          Length = 186

 Score =  245 bits (626), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 94/186 (50%), Positives = 125/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   ++ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN++V
Sbjct: 1   MSDAFDINDLKRRMEGAVNALKHDLGGLRTGRASASLLEPITIEAYGSTMPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRI +PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGMTLRICLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDQLKKLEKDSVISQDESRVLSEKVQKLTDDTIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|91784116|ref|YP_559322.1| ribosome recycling factor [Burkholderia xenovorans LB400]
 gi|296158901|ref|ZP_06841729.1| ribosome recycling factor [Burkholderia sp. Ch1-1]
 gi|122970345|sp|Q13XB9|RRF_BURXL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91688070|gb|ABE31270.1| ribosome recycling factor [Burkholderia xenovorans LB400]
 gi|295890776|gb|EFG70566.1| ribosome recycling factor [Burkholderia sp. Ch1-1]
          Length = 186

 Score =  245 bits (626), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGAEQKMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV  VE+ I ES+LGLNP  +G V+R+P+P  TEERR  L KV  + AE +K+
Sbjct: 68  VQPWEKKMVPVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDRFVAEIDKLVVTKEAEIMTV 186


>gi|300704228|ref|YP_003745831.1| ribosome recycling factor (ribosome-releasing factor) [Ralstonia
           solanacearum CFBP2957]
 gi|299071892|emb|CBJ43221.1| Ribosome recycling factor (Ribosome-releasing factor) [Ralstonia
           solanacearum CFBP2957]
          Length = 186

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVANV + + R + 
Sbjct: 8   KSAEQKMQKSIDAFKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVANVGLADARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K++V++VE+ I E++LGLNP   G V+R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKKLVSAVEKAIREADLGLNPATMGDVIRVPMPALTEERRKELTKVVKSEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  +  KK  K    SED     ++D+QK+TD  +  +D    EK KEIM  
Sbjct: 128 AVRNVRRDANEQFKKLVKDKAISEDDERRGQDDVQKLTDRFVAEVDKLVAEKDKEIMTV 186


>gi|170692145|ref|ZP_02883308.1| ribosome recycling factor [Burkholderia graminis C4D1M]
 gi|170142575|gb|EDT10740.1| ribosome recycling factor [Burkholderia graminis C4D1M]
          Length = 186

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGAEQKMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV  VE+ I ES+LGLNP  +G V+R+P+P  TEERR  L KV  + AE +K+
Sbjct: 68  VQPWEKKMVPVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVVTKEAEIMTV 186


>gi|56412492|ref|YP_149567.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197361427|ref|YP_002141063.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|62900788|sp|Q5PD60|RRF_SALPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689912|sp|B5BAM9|RRF_SALPK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56126749|gb|AAV76255.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197092903|emb|CAR58332.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 185

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTLTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  +VE+ I  S+LGLNP   G  + +P+P  TEERR  L K+    AE++++
Sbjct: 67  INVFDRSMGPAVEKAIMASDLGLNPSSAGTDICVPLPPLTEERRKDLTKIVRGEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K    SED     + ++QK+TD+ IK +D+   +K+ E+M F
Sbjct: 127 AVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDAALADKEAELMQF 185


>gi|323495359|ref|ZP_08100437.1| ribosome recycling factor [Vibrio brasiliensis LMG 20546]
 gi|323310430|gb|EGA63616.1| ribosome recycling factor [Vibrio brasiliensis LMG 20546]
          Length = 185

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   QDAQERMEKSVEALKNNLSKVRTGRAHPSLLAGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +K +D     K+KE+M  
Sbjct: 127 AIRNIRRDANGELKALLKDKEISEDEDRKGQDEIQKLTDAAVKQVDEVLAAKEKELMEV 185


>gi|56552049|ref|YP_162888.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241762003|ref|ZP_04760087.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260752418|ref|YP_003225311.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|59802974|sp|Q9X5F0|RRF_ZYMMO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56543623|gb|AAV89777.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373469|gb|EER63056.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258551781|gb|ACV74727.1| ribosome recycling factor [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 185

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 88/180 (48%), Positives = 125/180 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            +  +++ RM   +  LK D   LRTGR S S+LD V V+ YG+++PLNQVA V+V EPR
Sbjct: 4   YNKADLERRMKGAVESLKSDFSGLRTGRASTSLLDPVTVDVYGANMPLNQVATVSVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V VWDK  V  V++ I  + LGLNP+V+GQ+LR+P+P+ TEERR  L K+   Y+EK
Sbjct: 64  MITVQVWDKSNVTPVDKAIRSAGLGLNPVVDGQMLRLPIPDLTEERRKELAKLVGQYSEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++I+VRN+RRDG D +K+  K  + SED     EN++QK+TD TI +ID+    K+KEI+
Sbjct: 124 ARIAVRNVRRDGNDQIKQDEKKNEISEDEKKRFENEVQKLTDKTIADIDALAVHKEKEIL 183


>gi|163851510|ref|YP_001639553.1| ribosome recycling factor [Methylobacterium extorquens PA1]
 gi|218530317|ref|YP_002421133.1| ribosome recycling factor [Methylobacterium chloromethanicum CM4]
 gi|240138677|ref|YP_002963149.1| Ribosome recycling factor (Ribosome releasing factor) (RRF)
           [Methylobacterium extorquens AM1]
 gi|254561273|ref|YP_003068368.1| Ribosome recycling factor [Methylobacterium extorquens DM4]
 gi|238687348|sp|A9W4H6|RRF_METEP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809519|sp|B7KZH3|RRF_METC4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|163663115|gb|ABY30482.1| ribosome recycling factor [Methylobacterium extorquens PA1]
 gi|218522620|gb|ACK83205.1| ribosome recycling factor [Methylobacterium chloromethanicum CM4]
 gi|240008646|gb|ACS39872.1| Ribosome recycling factor (Ribosome releasing factor) (RRF)
           [Methylobacterium extorquens AM1]
 gi|254268551|emb|CAX24508.1| Ribosome recycling factor (Ribosome releasing factor) (RRF)
           [Methylobacterium extorquens DM4]
          Length = 187

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 93/182 (51%), Positives = 128/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL +IK RM   +S L KD+ +LRTGR +PS+LD ++VEAYGS +P+ QVA V+V EPR
Sbjct: 6   FDLGDIKRRMQGAVSSLSKDLGSLRTGRATPSLLDPIQVEAYGSSMPMAQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L +SVWD+ MV +VE+ I ES+LGLNP+ EGQ +R+ +PE  E+RR  +VKVAH Y E+
Sbjct: 66  LLSISVWDRSMVTNVEKAIRESDLGLNPMTEGQTIRLRIPEMNEQRRKEMVKVAHKYTEE 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D LKK  K G  S+D       ++QK TD  I  ID     K+KEIM
Sbjct: 126 ARVAVRHVRRDGLDILKKLEKDGAISQDDEKRQAAEVQKATDDAINEIDGVLASKEKEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|83749795|ref|ZP_00946769.1| Ribosome Recycling Factor (RRF) [Ralstonia solanacearum UW551]
 gi|207723357|ref|YP_002253756.1| ribosome recycling factor (ribosome-releasing factor) (rrf) protein
           [Ralstonia solanacearum MolK2]
 gi|207743241|ref|YP_002259633.1| ribosome recycling factor (ribosome-releasing factor) (rrf) protein
           [Ralstonia solanacearum IPO1609]
 gi|83723552|gb|EAP70756.1| Ribosome Recycling Factor (RRF) [Ralstonia solanacearum UW551]
 gi|206588556|emb|CAQ35519.1| ribosome recycling factor (ribosome-releasing factor) (rrf) protein
           [Ralstonia solanacearum MolK2]
 gi|206594638|emb|CAQ61565.1| ribosome recycling factor (ribosome-releasing factor) (rrf) protein
           [Ralstonia solanacearum IPO1609]
          Length = 186

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVANV + + R + 
Sbjct: 8   KSAEQKMQKSIDAFKADLAKVRTGRAHAGLLDHVQVDYYGSMVPISQVANVGLADARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K++V++VE+ I E++LGLNP   G V+R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKKLVSAVEKAIREADLGLNPATMGDVIRVPMPALTEERRKELTKVVKSEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  +  KK  K    SED     ++D+QK+TD  +  +D    EK KEIM  
Sbjct: 128 AVRNVRRDANEQFKKLVKDKAISEDDERRGQDDVQKLTDRFVAEVDKLVAEKDKEIMTV 186


>gi|113461129|ref|YP_719197.1| ribosome recycling factor [Haemophilus somnus 129PT]
 gi|170717712|ref|YP_001784784.1| ribosome recycling factor [Haemophilus somnus 2336]
 gi|122945268|sp|Q0I379|RRF_HAES1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044058|sp|B0UUI5|RRF_HAES2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|112823172|gb|ABI25261.1| ribosome recycling factor [Haemophilus somnus 129PT]
 gi|168825841|gb|ACA31212.1| ribosome recycling factor [Haemophilus somnus 2336]
          Length = 185

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L+  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L 
Sbjct: 7   KDTQQRMEKSLETLRTHIAKIRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ KI
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     +++IQKITD+ +K +D    +K+KE++ F
Sbjct: 127 AIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDTFVKKVDEILADKEKELLDF 185


>gi|156975503|ref|YP_001446410.1| ribosome recycling factor [Vibrio harveyi ATCC BAA-1116]
 gi|166231528|sp|A7MXZ7|RRF_VIBHB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|156527097|gb|ABU72183.1| hypothetical protein VIBHAR_03234 [Vibrio harveyi ATCC BAA-1116]
          Length = 185

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAPTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE S++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGSRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     +++IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANSDLKGLLKDKEISEDEDRKAQDEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|119471164|ref|ZP_01613696.1| ribosome releasing factor [Alteromonadales bacterium TW-7]
 gi|119445820|gb|EAW27102.1| ribosome releasing factor [Alteromonadales bacterium TW-7]
          Length = 185

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  +++ L   +  +RTGR  P++LD + V  YG+  PLNQVANVT+ + R L 
Sbjct: 7   KDAQARMQKSVTALGSQLSKIRTGRAHPAILDGIMVSYYGAPTPLNQVANVTIEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           + V+DK +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+K+     E  ++
Sbjct: 67  IGVFDKSLAQAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKIVRGEVEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K    SED     E+ IQK+TD  IK +D+    K+ E+M  
Sbjct: 127 AIRNIRRDANGDIKALLKDKDISEDEARQGEDAIQKLTDKFIKEMDTQLTAKEAELMEI 185


>gi|110633737|ref|YP_673945.1| ribosome recycling factor [Mesorhizobium sp. BNC1]
 gi|123353709|sp|Q11IJ5|RRF_MESSB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110284721|gb|ABG62780.1| ribosome recycling factor [Chelativorans sp. BNC1]
          Length = 186

 Score =  245 bits (626), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 93/186 (50%), Positives = 130/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   ID +++  R    I+  K D+ +LRTGR S ++LD + V+AYG+ +P+NQVA V+V
Sbjct: 1   MPDGIDFKDLHRRFDGAIAAFKHDIASLRTGRASANLLDPIHVDAYGASMPVNQVATVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+ VSVWD+ +V +V+R I E+NLG NPIVEG  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PEPRMISVSVWDQSLVGAVDRAIREANLGFNPIVEGSTLRIPLPELNEERRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++++ R++RRDGM+HLKK+ K G+ S+D      + +QK+TD TI  ID    EK+
Sbjct: 121 YAEHARVAARHVRRDGMEHLKKAEKDGEISQDEARVQSDRVQKMTDETIAAIDKLLAEKE 180

Query: 181 KEIMHF 186
            EI+  
Sbjct: 181 VEILQV 186


>gi|152968766|ref|YP_001333875.1| ribosome releasing factor [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|150953615|gb|ABR75645.1| ribosome releasing factor [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
          Length = 173

 Score =  244 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 74/173 (42%), Positives = 112/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D+
Sbjct: 1   MEKCVEAFKNQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+R
Sbjct: 61  SMSAAVEKAIMASDLGLNPSSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+ E+M F
Sbjct: 121 RDANDKVKALLKEKEISEDDDRRSQDDVQKMTDAAIKKVDAALADKEAELMQF 173


>gi|32034388|ref|ZP_00134578.1| COG0233: Ribosome recycling factor [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208052|ref|YP_001053277.1| ribosome recycling factor [Actinobacillus pleuropneumoniae L20]
 gi|165975984|ref|YP_001651577.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|190149883|ref|YP_001968408.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|303251563|ref|ZP_07337737.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|303252201|ref|ZP_07338369.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|307245431|ref|ZP_07527519.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307247544|ref|ZP_07529588.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|307249778|ref|ZP_07531756.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|307252124|ref|ZP_07534023.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307254385|ref|ZP_07536223.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307258844|ref|ZP_07540576.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307261026|ref|ZP_07542708.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307263207|ref|ZP_07544827.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|322514208|ref|ZP_08067270.1| ribosome recycling factor [Actinobacillus ureae ATCC 25976]
 gi|166230406|sp|A3MZT6|RRF_ACTP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238687536|sp|B0BUC8|RRF_ACTPJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238692331|sp|B3GXB4|RRF_ACTP7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|126096844|gb|ABN73672.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|165876085|gb|ABY69133.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|189915014|gb|ACE61266.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|302648984|gb|EFL79172.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|302649561|gb|EFL79743.1| ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306853772|gb|EFM85989.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306855909|gb|EFM88068.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306858193|gb|EFM90271.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306860424|gb|EFM92438.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306862684|gb|EFM94640.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306867195|gb|EFM99051.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306869328|gb|EFN01123.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306871424|gb|EFN03148.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|322119901|gb|EFX91910.1| ribosome recycling factor [Actinobacillus ureae ATCC 25976]
          Length = 185

 Score =  244 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L 
Sbjct: 7   KDTQDRMEKSLEALKSHISKIRTGRAQPSLLDGIQVEYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ KI
Sbjct: 67  VNVFDRSLISAVEKAILTSDLGLNPSSAGATIRVPLPPLTEERRRDLIKIVKGEGEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     +++IQKITD  +K +D     K+KE++ F
Sbjct: 127 AIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDGYVKKVDEVLAAKEKELLDF 185


>gi|307256592|ref|ZP_07538373.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865002|gb|EFM96904.1| Ribosome recycling factor [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 185

 Score =  244 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 75/177 (42%), Positives = 114/177 (64%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            +DRM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L V+
Sbjct: 9   TQDRMEKSLEALKSHISKIRTGRAQPSLLDGIQVEYYGSATPLRQLANVVAEDARTLAVN 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ KI++
Sbjct: 69  VFDRSLISAVEKAILTSDLGLNPSSAGATIRVPLPPLTEERRRDLIKIVKGEGEQGKIAI 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RN+RRD  D +K   K  + SED     +++IQKITD  +K +D     K+KE+++F
Sbjct: 129 RNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDGYVKKVDEVLAAKEKELLNF 185


>gi|295106079|emb|CBL03622.1| ribosome recycling factor [Gordonibacter pamelaeae 7-10-1-b]
          Length = 180

 Score =  244 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   ++RM   ++ L +   ++RTGR S  +LD +KV+ YG   P+NQ+A +   +  ML
Sbjct: 1   MLQAEERMERALASLGEAFGSVRTGRASALLLDRIKVDYYGVPTPVNQMAGIKTPDAHML 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++ ++E  I ES+LG+ P  +G  +R+P P  TEERR  LVK    YAE+++
Sbjct: 61  VIEPWDKGVLGAIEHAIMESDLGVTPSNDGSCIRLPFPSLTEERRRELVKQCKNYAEEAR 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR  R+D    L +  K     ED     + ++QK+TD  +  +D  F++K+ E+M  
Sbjct: 121 VAVRKARQDANAALDRCVKDDNLPEDDERRAQAEVQKLTDKYVAQVDEAFKKKEAEVMEI 180


>gi|117619336|ref|YP_855717.1| ribosome recycling factor [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166230407|sp|A0KHG6|RRF_AERHH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|117560743|gb|ABK37691.1| ribosome recycling factor [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 185

 Score =  244 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + KDRM  ++  LK  M  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L 
Sbjct: 7   NDAKDRMAKSVESLKTQMSKIRTGRAHPSLLDGIQVEYYGAATPLKQLANVVAEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++D+ M+ +VE+ I  S+LGLNP   GQ LR+P+P  TEERR  L K+  A AE +++
Sbjct: 67  ISIFDRSMIQAVEKAILTSDLGLNPSSNGQTLRVPLPPLTEERRRDLTKIVRAEAEGARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     + +IQK+TDS IK +D     K+KE+M  
Sbjct: 127 AVRNIRRDANADLKALLKDKEISEDDDRRAQEEIQKLTDSFIKLVDEALALKEKELMEI 185


>gi|223041490|ref|ZP_03611693.1| ribosome recycling factor [Actinobacillus minor 202]
 gi|240948667|ref|ZP_04753039.1| ribosome recycling factor [Actinobacillus minor NM305]
 gi|223017748|gb|EEF16155.1| ribosome recycling factor [Actinobacillus minor 202]
 gi|240296883|gb|EER47461.1| ribosome recycling factor [Actinobacillus minor NM305]
          Length = 185

 Score =  244 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL QVANV   + R L 
Sbjct: 7   KDTQDRMEKSLDALKSHISKIRTGRAQPSLLDGIQVEYYGSATPLRQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ KI
Sbjct: 67  VNVFDRSLISAVEKAILTSDLGLNPSSAGATIRVPLPPLTEERRRDLIKIVKGEGEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     +++IQKITDS IK +D     K+KE++ F
Sbjct: 127 AIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDSYIKKVDEVLAAKEKELLDF 185


>gi|86605415|ref|YP_474178.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
 gi|86553957|gb|ABC98915.1| ribosome recycling factor [Synechococcus sp. JA-3-3Ab]
          Length = 182

 Score =  244 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 115/179 (64%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++L  I++ M   +   ++   T+RTGR + S+LD ++VE YG   PL  +A++T  +  
Sbjct: 1   MELAEIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSS 60

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L++  +D   +A++ER I  S+LGL P  +G+V+R+ +P  TEERR  L K     AE+
Sbjct: 61  TLLIQPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEE 120

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            ++S+RNIRRDG+D ++K  K+G+ SED   SL++ IQK+TD  IK ID    EK+KE+
Sbjct: 121 GRVSIRNIRRDGIDSVRKREKNGELSEDESKSLQDAIQKLTDRYIKKIDELLAEKEKEL 179


>gi|328553453|gb|AEB23945.1| ribosome recycling factor [Bacillus amyloliquefaciens TA208]
          Length = 185

 Score =  244 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K+RM   ++   +++ ++R GR +PS+LD V VE YG+  PLNQ++++ V E RML
Sbjct: 6   LTQTKERMEKAVAAYSRELASVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVSEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  +  +E+ I +++LG+ P  +G ++RI +P  TEERR  LVKV   YAE++K
Sbjct: 66  VVTPYDKTAIGDIEKAILKADLGVTPTSDGTIIRIAIPALTEERRKELVKVVKKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K+G  +ED + +   D+QK+TD  +  IDS  ++K+KEIM  
Sbjct: 126 VAVRNVRRDSNDELKKLEKNGDITEDELRASSEDVQKLTDEFVSKIDSVTKDKEKEIMEV 185


>gi|319649531|ref|ZP_08003687.1| ribosome recycling factor [Bacillus sp. 2_A_57_CT2]
 gi|317398693|gb|EFV79375.1| ribosome recycling factor [Bacillus sp. 2_A_57_CT2]
          Length = 185

 Score =  244 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + K+RM   IS   +++ ++R G+ + S+LD + V+ YG+  P+NQ+A V+  E R+L
Sbjct: 6   IADAKERMTKAISAYTRELASIRAGKANASLLDRITVDYYGAPTPVNQLAGVSAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK ++  +E+ I +S++GLNP  +G V+R+ +P+ TEERR  LVKV    +E +K
Sbjct: 66  VITPYDKSILGEIEKAILKSDIGLNPSNDGSVIRLAIPQLTEERRKDLVKVVKKESEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRD  D LKK  K+G  +ED +    +DIQK+TD  I  ID   +EK+KEI+  
Sbjct: 126 VAIRNVRRDANDDLKKLEKNGDITEDDLRGFSDDIQKLTDDHISKIDELTKEKEKEILAV 185


>gi|37926485|pdb|1ISE|A Chain A, Crystal Structure Of A Mutant Of Ribosome Recycling Factor
           From Escherichia Coli, Arg132gly
          Length = 185

 Score =  244 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE++++
Sbjct: 67  INVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+ RD  D +K   K  + SED     ++D+QK+TD+ IK I++   +K+ E+M F
Sbjct: 127 AVRNVGRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF 185


>gi|332284282|ref|YP_004416193.1| ribosome recycling factor [Pusillimonas sp. T7-7]
 gi|330428235|gb|AEC19569.1| ribosome recycling factor [Pusillimonas sp. T7-7]
          Length = 186

 Score =  244 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+++ RMG +I  LK  +  +RTGR    +LD V+VE YGS VP++QVAN+ +L+ R + 
Sbjct: 8   QSVESRMGKSIETLKVGLSKIRTGRAHAGILDHVQVEYYGSPVPVSQVANINLLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VW+K M   VE+ I +S+LGLNPI  G  +R+P+P  TEERR  L KV     E +KI
Sbjct: 68  VQVWEKSMAGPVEKAIRDSDLGLNPIAMGDSIRVPMPALTEERRRDLTKVVRTEGEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D LKK  K  + SED    +++++QK+TD  +  ID    +K+ EIM  
Sbjct: 128 AVRNLRRDANDSLKKLVKDKEISEDDERRMQDEVQKLTDKHVAEIDKLVAQKEAEIMTV 186


>gi|260459217|ref|ZP_05807472.1| ribosome recycling factor [Mesorhizobium opportunistum WSM2075]
 gi|259034771|gb|EEW36027.1| ribosome recycling factor [Mesorhizobium opportunistum WSM2075]
          Length = 184

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 95/179 (53%), Positives = 129/179 (72%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            ++K RM   I+  K D+ +LRTGR S ++LD ++V+AYG+ +P+NQVANVTV EPRM+ 
Sbjct: 6   DDLKRRMDGAIAAFKHDLASLRTGRASSNLLDAIQVQAYGTTMPINQVANVTVPEPRMIS 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VSVWDK MV++V+R I ESNLG NPIV+G  LRIP+PE  E+RR  LVK++H YAE +++
Sbjct: 66  VSVWDKSMVSAVDRAIRESNLGFNPIVDGTNLRIPLPELNEQRRKELVKISHGYAENARV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + R++RRDGMD LKK+ K G  SED      + +QK+TD TI  ID    +K+ EIM  
Sbjct: 126 AARHVRRDGMDFLKKAEKDGDISEDDHRKRSDQVQKLTDETISTIDHLLSDKEAEIMQV 184


>gi|172038505|ref|YP_001805006.1| ribosome recycling factor [Cyanothece sp. ATCC 51142]
 gi|226749927|sp|B1X0Q1|RRF_CYAA5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|171699959|gb|ACB52940.1| ribosome recycling factor [Cyanothece sp. ATCC 51142]
          Length = 182

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++K+ M  ++   ++   T+RTGR + S+LD V VE YG+  PL Q+AN++  +   +
Sbjct: 3   LDDLKENMQKSVEATQRSFNTIRTGRANASILDRVTVEYYGTETPLYQLANISTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +  +E+ I  S++GL P  +GQV+R+ +P  TEERR  LVK+A   AE+ K
Sbjct: 63  MIQPYDKGSMGQIEKAIQMSDVGLTPNNDGQVIRLNIPPLTEERRKDLVKLASKMAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +D ++K  K+   SED    L++DIQK+TD     ID     K+K+IM  
Sbjct: 123 VAIRNIRRDAIDDVRKQEKNSDISEDESRGLQDDIQKVTDQFTDKIDELLAAKEKDIMTV 182


>gi|147677590|ref|YP_001211805.1| ribosome recycling factor [Pelotomaculum thermopropionicum SI]
 gi|189044063|sp|A5D2T8|RRF_PELTS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146273687|dbj|BAF59436.1| ribosome recycling factor [Pelotomaculum thermopropionicum SI]
          Length = 185

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +  M  TI  +KK+  +LR GR +P++LD V V  YG+  P+NQ+AN++V E R+L
Sbjct: 6   IKEAESNMKKTIEVVKKEFASLRAGRATPALLDKVMVNYYGTPTPVNQLANISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WDK ++  +ER I +S+LG+ P  +G V+R+ +P+ T+ERR  L+KV    AE+ +
Sbjct: 66  VVQPWDKTVLPEIERAILKSDLGITPASDGNVIRLAIPQLTQERRAELMKVIKKKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  + LK  +K GK SED +   ++++QK+TD  IK IDS    K++EIM  
Sbjct: 126 VAIRNIRRDTNEQLKSQQKDGKMSEDELKRSQDEVQKLTDRYIKEIDSLLSTKEQEIMQV 185


>gi|300691601|ref|YP_003752596.1| ribosome recycling factor (ribosome-releasing factor) [Ralstonia
           solanacearum PSI07]
 gi|299078661|emb|CBJ51319.1| Ribosome recycling factor (Ribosome-releasing factor) [Ralstonia
           solanacearum PSI07]
          Length = 186

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+ + + R + 
Sbjct: 8   KSAEQKMQKSIDAFKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVANLGLADARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV++VE+ I E++LGLNP   G+V+R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKKMVSAVEKAIREADLGLNPATMGEVIRVPMPPLTEERRKELTKVVKSEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  +  KK  K    SED     ++++QK+TD  +  +D    EK KEIM  
Sbjct: 128 AVRNVRRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDRFVSEVDKLVAEKDKEIMTV 186


>gi|269966254|ref|ZP_06180343.1| Ribosome-recycling factor [Vibrio alginolyticus 40B]
 gi|269829169|gb|EEZ83414.1| Ribosome-recycling factor [Vibrio alginolyticus 40B]
          Length = 185

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKIRTGRAHPSLLSGISVEYYGAATPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAIMTSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     +++IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDEDRKAQDEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|91977324|ref|YP_569983.1| ribosome recycling factor [Rhodopseudomonas palustris BisB5]
 gi|123721792|sp|Q136A7|RRF_RHOPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91683780|gb|ABE40082.1| ribosome recycling factor [Rhodopseudomonas palustris BisB5]
          Length = 187

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 93/185 (50%), Positives = 132/185 (71%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           ++  D+  +K RM      L+ ++  LRTGR S SML+ V+V+AYG+H+PLNQVA V+V 
Sbjct: 3   SEKFDINEVKRRMHGASQALQHELGGLRTGRASASMLEPVQVDAYGTHMPLNQVATVSVP 62

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPR+L V VWDK MV +VE+ I +SNLGL+P  EGQVLR+ +PE  ++RR  LVKVAH Y
Sbjct: 63  EPRLLSVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNQDRRKELVKVAHKY 122

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE ++++VR++RRDG+D +KK  K+ + SED    L++++QK TD+TI  ID     K+K
Sbjct: 123 AEAARVAVRHVRRDGLDIIKKLEKAHEISEDDQKRLDHEVQKATDATISEIDQLLANKEK 182

Query: 182 EIMHF 186
           EI+  
Sbjct: 183 EILTV 187


>gi|258516352|ref|YP_003192574.1| ribosome recycling factor [Desulfotomaculum acetoxidans DSM 771]
 gi|257780057|gb|ACV63951.1| ribosome recycling factor [Desulfotomaculum acetoxidans DSM 771]
          Length = 185

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 80/180 (44%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +D M  T+  +KKD  +LR GR +P +LD + V+ YG+  P+NQ+ANV+V E R+L
Sbjct: 6   LEDAEDSMKKTVEVVKKDFASLRAGRATPGLLDKINVDYYGTPTPVNQLANVSVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++ ++E+ I +S+LG+ P  +G V+R+ VP+ TEERR  LVKV    AE+ +
Sbjct: 66  VIQPWDKSVIPALEKAILKSDLGITPNSDGVVIRLAVPQLTEERRKDLVKVVKKKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LK  +K G  +ED     ++++QK+TD  IK+ID     K+KEIM  
Sbjct: 126 VAVRNIRRDANDLLKSEQKDGNITEDDSRRAQDEVQKLTDKYIKDIDQLMANKEKEIMQV 185


>gi|17987109|ref|NP_539743.1| ribosome recycling factor [Brucella melitensis bv. 1 str. 16M]
 gi|225852656|ref|YP_002732889.1| ribosome recycling factor [Brucella melitensis ATCC 23457]
 gi|256044814|ref|ZP_05447718.1| ribosome recycling factor [Brucella melitensis bv. 1 str. Rev.1]
 gi|256263850|ref|ZP_05466382.1| ribosome recycling factor rrf [Brucella melitensis bv. 2 str. 63/9]
 gi|260565586|ref|ZP_05836070.1| ribosome recycling factor [Brucella melitensis bv. 1 str. 16M]
 gi|265991238|ref|ZP_06103795.1| ribosome recycling factor rrf [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|3122781|sp|P94340|RRF_BRUME RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=CP24; AltName: Full=Ribosome-releasing factor
 gi|254809496|sp|C0RJC7|RRF_BRUMB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|1674445|gb|AAB19043.1| CP24 [Brucella melitensis]
 gi|17982770|gb|AAL52007.1| ribosome recycling factor (rrf) [Brucella melitensis bv. 1 str.
           16M]
 gi|225641021|gb|ACO00935.1| ribosome recycling factor [Brucella melitensis ATCC 23457]
 gi|260151654|gb|EEW86748.1| ribosome recycling factor [Brucella melitensis bv. 1 str. 16M]
 gi|263002022|gb|EEZ14597.1| ribosome recycling factor rrf [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263093981|gb|EEZ17915.1| ribosome recycling factor rrf [Brucella melitensis bv. 2 str. 63/9]
 gi|326409177|gb|ADZ66242.1| ribosome recycling factor [Brucella melitensis M28]
 gi|326538887|gb|ADZ87102.1| ribosome recycling factor [Brucella melitensis M5-90]
          Length = 186

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 94/186 (50%), Positives = 125/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+   D+ ++K RM   ++ LK D+  LRTGR S S+L+ + +EAYGS +P+NQVAN++V
Sbjct: 1   MSDAFDINDLKRRMEGAVNALKHDLGGLRTGRASASLLEPITIEAYGSTMPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRI +PE  E+RR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKSMVGAVERAIRDSGLGLNPITDGMTLRIRLPELNEQRRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I+ R++RRDGMD LKK  K    S+D    L   +QK+TD TI  +D     K+
Sbjct: 121 YAEQGRIAARHVRRDGMDQLKKLEKDSVISQDESRVLSEKVQKLTDDTIAEMDKIVAVKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|226940990|ref|YP_002796064.1| ribosome recycling factor [Laribacter hongkongensis HLHK9]
 gi|254809516|sp|C1D9F3|RRF_LARHH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226715917|gb|ACO75055.1| Frr [Laribacter hongkongensis HLHK9]
          Length = 185

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  TI   K  +  +RTGR    +LD + V+ YGS  P+NQVANVT+++ R + 
Sbjct: 7   KTAESKMQKTIEAFKHTLAKVRTGRAHAGLLDHITVDYYGSDTPINQVANVTLIDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VW+K M A VE+ I +S+LGLNP+  G+V+R+P+P  TEERR  L KV    AE +++
Sbjct: 67  VQVWEKNMAAKVEKAIRDSDLGLNPMSMGEVIRVPMPALTEERRRDLTKVVKGEAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LK   K    +ED     ++DIQK+TD  +  +D  F EK+KE+M  
Sbjct: 127 AVRNVRRDANNDLKTLLKDKDITEDEERRAQDDIQKLTDKYVAEVDKLFAEKEKELMAI 185


>gi|154253632|ref|YP_001414456.1| ribosome recycling factor [Parvibaculum lavamentivorans DS-1]
 gi|190360245|sp|A7HY16|RRF_PARL1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|154157582|gb|ABS64799.1| ribosome recycling factor [Parvibaculum lavamentivorans DS-1]
          Length = 187

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 81/185 (43%), Positives = 118/185 (63%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           +   D+ + + RM   +  LK++   LRTGR + S+L+ + VEAYG  +P+NQV  + V 
Sbjct: 3   DTTFDIDDTERRMRGALQSLKQEFAGLRTGRATASLLEPIVVEAYGQSMPINQVGTIGVP 62

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPRML V VWDK M+++VE+ I  S LGLNP V+G ++R+P+PE  +ERR  L K+A  Y
Sbjct: 63  EPRMLTVQVWDKGMISAVEKAIRSSGLGLNPNVDGMLIRLPIPELNQERRAELTKIAAKY 122

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E+++I+VRN+RRD MD LK+  K    S+D   S    +QK+TD  I  ID+    K+ 
Sbjct: 123 TEQARIAVRNVRRDAMDELKRLEKDSHMSQDDHKSWSEKVQKLTDKVIGEIDAALAHKEA 182

Query: 182 EIMHF 186
           +IM  
Sbjct: 183 DIMQV 187


>gi|148982441|ref|ZP_01816756.1| ribosome recycling factor [Vibrionales bacterium SWAT-3]
 gi|145960478|gb|EDK25851.1| ribosome recycling factor [Vibrionales bacterium SWAT-3]
          Length = 185

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  L+  +  +RTGR  PS+L  + VE YG+  PL QVANV   + R L 
Sbjct: 7   KDAQERMEKSVDALRNSLQKIRTGRAHPSLLSGLTVEYYGAPTPLTQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK +   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKTLTPLVEKAIMTSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +KN+D     K+KE+M  
Sbjct: 127 AIRNIRRDANGDLKALLKDKEISEDEDRKAQDEIQKLTDAAVKNVDEVLATKEKELMEV 185


>gi|294635121|ref|ZP_06713632.1| ribosome recycling factor [Edwardsiella tarda ATCC 23685]
 gi|291091498|gb|EFE24059.1| ribosome recycling factor [Edwardsiella tarda ATCC 23685]
          Length = 185

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K ++  +RTGR  P++LD ++VE YG+  PL Q+AN+   + R L 
Sbjct: 7   KDAETRMEKCVESFKGNISKIRTGRAHPNLLDGIQVEYYGAATPLRQLANIVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+K+  + AE  ++
Sbjct: 67  VTVFDRSMSGAIEKAILTSDLGLNPSSAGTVIRVPLPPLTEERRKDLIKLVRSEAESGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K  + SED     ++DIQKITD  IK ID+   +K+KE+M F
Sbjct: 127 SVRNVRRDANDKVKALLKDKEISEDEDRKSQDDIQKITDLMIKKIDAALADKEKELMEF 185


>gi|188533040|ref|YP_001906837.1| ribosome recycling factor [Erwinia tasmaniensis Et1/99]
 gi|238689729|sp|B2VE11|RRF_ERWT9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|188028082|emb|CAO95939.1| Ribosome recycling factor [Erwinia tasmaniensis Et1/99]
          Length = 185

 Score =  244 bits (624), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   +  +  +RTGR SPS+LD + V+ YGS  PL Q+A+VTV + R L 
Sbjct: 7   KDAETRMEKCVEAFRNHISKIRTGRASPSILDGIMVDYYGSATPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  INVFDRSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D LK   K  + SED     + D+QK+TD  IK +D+   +K+ E+M F
Sbjct: 127 SVRNVRRDANDKLKALLKDKEISEDDDRRAQEDVQKMTDIFIKKVDAALADKETELMDF 185


>gi|327392800|dbj|BAK10222.1| ribosome recycling factor Frr [Pantoea ananatis AJ13355]
          Length = 173

 Score =  244 bits (624), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 74/173 (42%), Positives = 111/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D+
Sbjct: 1   MDKCVEAFKTTISKVRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDSRTLKINVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            +  +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ ++SVRN+R
Sbjct: 61  SLGPAVEKAIMASDLGLNPNSAGSDIRVPLPALTEERRKDLIKIVRGEAEQGRVSVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SED     +++IQK+TD+ IK +D+   EK+ E+M F
Sbjct: 121 RDANDKIKALLKDKEISEDDERRSQDEIQKMTDAHIKKVDAALAEKEAELMDF 173


>gi|319783668|ref|YP_004143144.1| ribosome recycling factor [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169556|gb|ADV13094.1| ribosome recycling factor [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 184

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 94/179 (52%), Positives = 128/179 (71%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            ++K RM   I+  K D+ +LRTGR S ++LD ++V+AYG+ +P+NQVANV+V EPRM+ 
Sbjct: 6   DDLKRRMDGAIAAFKHDLASLRTGRASSNLLDAIQVQAYGTTMPINQVANVSVPEPRMIS 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VSVWDK MV +V+R I ESNLG NPIV+G  LRIP+PE  E+RR  LVK++H YAE +++
Sbjct: 66  VSVWDKSMVGAVDRAIRESNLGFNPIVDGTNLRIPLPELNEQRRKELVKISHTYAENARV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + R++RRDGMD LKK+ K G  SED      + +QK+TD TI  ID    +K+ EIM  
Sbjct: 126 AARHVRRDGMDFLKKAEKDGDISEDDQRKRSDQVQKLTDETISTIDHLLSDKEAEIMQV 184


>gi|261338830|ref|ZP_05966688.1| hypothetical protein ENTCAN_05025 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318653|gb|EFC57591.1| ribosome recycling factor [Enterobacter cancerogenus ATCC 35316]
          Length = 185

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDAEVRMDKCVEAFKNQISKIRTGRASPSLLDGIIVEYYGTPTPLRQLASVTVEDTRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  ++E+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  INVFDRSMSPAIEKAIMASDLGLNPSSAGADIRVPLPALTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K  + SED     ++D+QK+TD+ IK ID+   +K+ E+M F
Sbjct: 127 SVRNVRRDANDKVKALLKEKEISEDDDRRSQDDVQKMTDAAIKKIDAALADKEAELMQF 185


>gi|238763976|ref|ZP_04624932.1| Ribosome-recycling factor [Yersinia kristensenii ATCC 33638]
 gi|238697793|gb|EEP90554.1| Ribosome-recycling factor [Yersinia kristensenii ATCC 33638]
          Length = 185

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L 
Sbjct: 7   KDTEVRMEKCLEAFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  LTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  D +K   K  + SED     + DIQK+TD+ IK +D+    K+ E+M F
Sbjct: 127 SIRNVRRDANDKVKALLKDKEISEDEDRRSQEDIQKLTDAFIKKVDAALAAKETELMDF 185


>gi|220909994|ref|YP_002485305.1| ribosome recycling factor [Cyanothece sp. PCC 7425]
 gi|254809507|sp|B8HL79|RRF_CYAP4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219866605|gb|ACL46944.1| ribosome recycling factor [Cyanothece sp. PCC 7425]
          Length = 182

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 69/177 (38%), Positives = 111/177 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++D M  ++   ++   T+RTGR + S+LD V VE YG+  PL  +AN++  +   +
Sbjct: 3   LADVEDHMQKSVEATQRAFNTIRTGRANTSLLDRVTVEYYGAETPLRSLANISTPDSSTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  +  +E+ I  S+LGL P  +G V+R+ +P  T +RR  LVK A   AE+ K
Sbjct: 63  AIQPFDRNSLNLIEKAISMSDLGLTPNNDGTVIRLNIPPLTSDRRKELVKTASKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +S+RN+RRD +D +KK  K+G+ SED V  L++ IQK+TD  I  +D    EK+K+I
Sbjct: 123 VSIRNVRRDAVDSVKKQGKAGELSEDEVKDLQDKIQKLTDKYIAKVDGLLAEKEKDI 179


>gi|261407947|ref|YP_003244188.1| ribosome recycling factor [Paenibacillus sp. Y412MC10]
 gi|329929321|ref|ZP_08283074.1| ribosome recycling factor [Paenibacillus sp. HGF5]
 gi|261284410|gb|ACX66381.1| ribosome recycling factor [Paenibacillus sp. Y412MC10]
 gi|328936690|gb|EGG33133.1| ribosome recycling factor [Paenibacillus sp. HGF5]
          Length = 184

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N ++RM   I  LK+D+ TLR GR +P++LD + VE YG+  PLNQ+AN++  + R L+
Sbjct: 7   KNAEERMEKAILSLKRDLATLRAGRAAPALLDRITVEYYGAQTPLNQLANISTPDSRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +A +E+ I +S++GL P  +G  +R+ VP  TEERR  LVK+   + E++K+
Sbjct: 67  IQPWDKSSLADIEKAIMKSDIGLTPANDGNQIRLVVPALTEERRTELVKMTKKFGEEAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  D +KK  K+   SED     + DIQK TD  I  +D     K+KEIM  
Sbjct: 127 AIRNIRRDANDDIKKLEKT-DISEDESRRHQEDIQKATDKFIAEVDKVLVAKEKEIMEV 184


>gi|83858385|ref|ZP_00951907.1| ribosome releasing factor [Oceanicaulis alexandrii HTCC2633]
 gi|83853208|gb|EAP91060.1| ribosome releasing factor [Oceanicaulis alexandrii HTCC2633]
          Length = 185

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 94/182 (51%), Positives = 127/182 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+++I+ RM   I  LKK+   LRTGR S S+LD +KVEAYG+  P+NQV NV+V EPR
Sbjct: 4   FDIKDIERRMDGAIDALKKEFGGLRTGRASASLLDPIKVEAYGALTPINQVGNVSVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ +SVWDK +  +VE+ I  S+LGLNP+ EG+ LRIP+P   EERR  L K A AYAE 
Sbjct: 64  MITISVWDKNLAGAVEKAIRNSSLGLNPVSEGETLRIPIPPLNEERRNELAKTAGAYAEN 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++I+VRN+RRDGMD LK+  K G+ SED    L + IQK+TD+ +  ID+  + K++EI 
Sbjct: 124 ARIAVRNVRRDGMDQLKRDEKDGEISEDQHKKLADQIQKLTDAKVSAIDALLKTKQEEIT 183

Query: 185 HF 186
             
Sbjct: 184 QV 185


>gi|260892482|ref|YP_003238579.1| ribosome recycling factor [Ammonifex degensii KC4]
 gi|260864623|gb|ACX51729.1| ribosome recycling factor [Ammonifex degensii KC4]
          Length = 184

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +  M   +   KKD+  +RTGR SP++L+ V V+ YG   P+NQ+A +T  EPR+L
Sbjct: 5   LERAELSMKKAVEHFKKDLAAIRTGRASPALLEKVMVDYYGVPTPVNQLATITAPEPRLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD+ ++  +E+ I +S+LGL P  +GQV+R+ +P+ T+ERR  LV+VA   AE+++
Sbjct: 65  VIQPWDRSIINEIEKAILKSDLGLTPNNDGQVIRLILPQLTQERREELVRVARKRAEEAR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+  D LK+ +K    SED +  L+ ++QK+T+  IK +D+    K+KEIM  
Sbjct: 125 VAIRNIRREANDELKEKQKKENVSEDEIKRLQGEVQKLTEKYIKEVDNLLAAKEKEIMEV 184


>gi|295676822|ref|YP_003605346.1| ribosome recycling factor [Burkholderia sp. CCGE1002]
 gi|295436665|gb|ADG15835.1| ribosome recycling factor [Burkholderia sp. CCGE1002]
          Length = 186

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGAEQKMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV  VE+ I ES+LGLNP   G V+R+P+P  TEERR  L KV  + AE +K+
Sbjct: 68  VQPWEKKMVQVVEKAIRESDLGLNPATHGDVIRVPMPALTEERRRELTKVVRSEAETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVTTKEAEIMTV 186


>gi|197105240|ref|YP_002130617.1| ribosome recycling factor protein [Phenylobacterium zucineum HLK1]
 gi|238690149|sp|B4RBZ1|RRF_PHEZH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|196478660|gb|ACG78188.1| ribosome recycling factor protein [Phenylobacterium zucineum HLK1]
          Length = 188

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 91/180 (50%), Positives = 128/180 (71%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +DRM   ++ LK++  +LRTGR S S+LD + V+AYGS +PL QVA V+V EPRM+
Sbjct: 9   LSKYRDRMDKAVAALKEEFGSLRTGRASASLLDQIHVDAYGSSMPLTQVAAVSVPEPRMI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+VWD+ MV SVE+ I +S+LGLNP+V+GQ LRIP+P  TEERR  L K+A  YAE+ +
Sbjct: 69  TVNVWDRGMVVSVEKAIRQSDLGLNPVVDGQTLRIPIPPLTEERRKDLAKIAGRYAEQQR 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + L+K++K    S+D    +E ++QK+TD  IK ID   + K++EIM  
Sbjct: 129 VAVRNIRRDANEDLRKAQKDNVISQDEEKRMETEVQKMTDEAIKRIDEALKTKEQEIMQV 188


>gi|319408398|emb|CBI82053.1| Ribosome recycling factor [Bartonella schoenbuchensis R1]
          Length = 186

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 96/186 (51%), Positives = 129/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    + ++K RM   +S  K ++  LRTGR S S+L+ + VEAYGS VP+ QVAN++V
Sbjct: 1   MNVTSMMDDLKRRMDGAVSAFKHELSGLRTGRASASLLEPLTVEAYGSTVPIQQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +VER I +S LG NPI +G  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PEPRMLSVSVWDKTMVGAVERAIRDSGLGFNPITDGMNLRIPIPELNEERRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+++++ R++RRDGMD+LKK  K G+ S+D   +L   +QK+TD TI +ID     K+
Sbjct: 121 YAEQARVAARHVRRDGMDNLKKLEKEGEISQDESRNLSEKVQKLTDETITDIDKILGVKE 180

Query: 181 KEIMHF 186
            +IM  
Sbjct: 181 ADIMQV 186


>gi|187924430|ref|YP_001896072.1| ribosome recycling factor [Burkholderia phytofirmans PsJN]
 gi|238689610|sp|B2T5J1|RRF_BURPP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|187715624|gb|ACD16848.1| ribosome recycling factor [Burkholderia phytofirmans PsJN]
          Length = 186

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGAEQKMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV  VE+ I ES+LGLNP  +G V+R+P+P  TEERR  L KV  + AE +K+
Sbjct: 68  VQPWEKKMVQVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVVTKEAEIMTV 186


>gi|320540035|ref|ZP_08039691.1| ribosome recycling factor [Serratia symbiotica str. Tucson]
 gi|320029884|gb|EFW11907.1| ribosome recycling factor [Serratia symbiotica str. Tucson]
          Length = 199

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM  ++   K  +  +RTGR SPS+LD + VE YG+  PL Q+A VTV + R L 
Sbjct: 21  KDADIRMEKSVEAFKNQISKVRTGRASPSILDGIMVEYYGAATPLRQLAIVTVEDSRTLA 80

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++++D+ + ++VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 81  INLFDRSLGSAVEKAIMSSDLGLNPNSAGSVIRVPLPPLTEERRRDLIKVVRAEAEQGRV 140

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     +++IQK+TD+ IK +D+   +K+KE++ F
Sbjct: 141 AVRNVRRDANDKVKALLKDKEISEDADRRSQDEIQKMTDAYIKLLDAALADKEKELLDF 199


>gi|224825016|ref|ZP_03698122.1| ribosome recycling factor [Lutiella nitroferrum 2002]
 gi|224602687|gb|EEG08864.1| ribosome recycling factor [Lutiella nitroferrum 2002]
          Length = 185

 Score =  244 bits (623), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  ++   K D+  +RTGR    +LD V V+ YGS VP+NQVANVT+++ R + 
Sbjct: 7   KSAEQKMQKSLEAFKNDLTKVRTGRAHTGILDHVMVDYYGSDVPVNQVANVTLIDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M+  +E+ I +S+LGLNP   G+++R+P+P  TEERR  L+K+    AE +++
Sbjct: 67  VQPWEKSMLGKIEKAIRDSDLGLNPASMGEIIRVPMPMLTEERRKDLIKLVRGEAEGARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  +  K   K    +ED     ++DIQK+TD  I  +D     K+ ++M  
Sbjct: 127 AVRNIRRDANNEFKNLLKDKSITEDDERRGQDDIQKLTDKYIAEVDKALAAKETDLMAV 185


>gi|319779547|ref|YP_004130460.1| Ribosome recycling factor [Taylorella equigenitalis MCE9]
 gi|317109571|gb|ADU92317.1| Ribosome recycling factor [Taylorella equigenitalis MCE9]
          Length = 186

 Score =  244 bits (623), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + + RM  +I  LK ++  +RTGR    +LD V V+ YGS VP++QVANV+V++ R L 
Sbjct: 8   ASAESRMNKSIESLKTNLSKIRTGRAHAGILDHVTVDYYGSLVPVSQVANVSVVDARTLS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M   +++ I ES+LGLNPI  G+ +R+P+P  TEERR  L KV  A  E +K+
Sbjct: 68  VQPWEKNMAGPIDKAIRESDLGLNPITLGEAIRVPMPALTEERRRDLTKVVRAEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D LKK  K  + SED     +  IQK+TD  +  ID    EK+ EIM  
Sbjct: 128 AIRNLRRDSNDTLKKLLKDKEISEDDDRRAQEVIQKMTDKFVGEIDKIVSEKEAEIMKV 186


>gi|119898197|ref|YP_933410.1| ribosome recycling factor [Azoarcus sp. BH72]
 gi|166230409|sp|A1K6R8|RRF_AZOSB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119670610|emb|CAL94523.1| Frr protein [Azoarcus sp. BH72]
          Length = 185

 Score =  243 bits (622), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 78/184 (42%), Positives = 115/184 (62%), Gaps = 1/184 (0%)

Query: 4   VIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + DL+   + +M  +I  LK D+  +RTGR    +LD V VE YGS VP+NQVAN+T+++
Sbjct: 2   ISDLKKTTEQKMQKSIDALKTDLAKIRTGRAHTGLLDHVMVEYYGSMVPINQVANITLID 61

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R + V  W+K M+  VE+ I + +LGLNP   G+++R+P+P  TEERR  L KV     
Sbjct: 62  ARTIGVQTWEKPMLGKVEKAIRDCDLGLNPANMGEIIRVPMPALTEERRRDLTKVVRQEG 121

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E +K++VRN+RRD   HLK + K    SED     ++DIQK+TD  +  ID    +K++E
Sbjct: 122 ETAKVAVRNLRRDANQHLKDAVKDKTISEDDERRSQDDIQKLTDKYVAEIDKLLAQKEQE 181

Query: 183 IMHF 186
           +M  
Sbjct: 182 LMQI 185


>gi|283851250|ref|ZP_06368533.1| ribosome recycling factor [Desulfovibrio sp. FW1012B]
 gi|283573419|gb|EFC21396.1| ribosome recycling factor [Desulfovibrio sp. FW1012B]
          Length = 184

 Score =  243 bits (622), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 80/186 (43%), Positives = 117/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +V  L   +DRM   +S L K+   LRTGR + S+LD V+VE YGS  PL Q+A+V+ 
Sbjct: 1   MREV--LTEAEDRMKKALSVLDKEFARLRTGRATTSLLDGVRVEYYGSVTPLEQIASVST 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + +  WD++    VER I +S+LGL P+ +G+++RI +P  TE+RR  L KVA  
Sbjct: 59  PDSRTITIQPWDRKAFNDVERAILKSDLGLTPVNDGKIIRISIPPLTEDRRKDLAKVAKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE++K+++RN+RRD  + LKK +     SED     + D+QK+TD  I   D  F +K+
Sbjct: 119 YAEEAKVAIRNVRRDANEALKKKKNDKAISEDDQHKGQEDVQKLTDGYIAKTDEAFSKKE 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEI 184


>gi|110679817|ref|YP_682824.1| ribosome recycling factor [Roseobacter denitrificans OCh 114]
 gi|123065540|sp|Q166F5|RRF_ROSDO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|109455933|gb|ABG32138.1| ribosome recycling factor [Roseobacter denitrificans OCh 114]
          Length = 187

 Score =  243 bits (622), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 91/188 (48%), Positives = 124/188 (65%), Gaps = 3/188 (1%)

Query: 1   MNQ--VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M++  ++D  +I+ RM   IS LK +  +LRTGR S SML+ V V+AYG   P+NQV  V
Sbjct: 1   MSEDFMLDTDDIERRMDGAISSLKTEFASLRTGRASASMLEPVMVDAYGQRTPINQVGTV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
            V EPRM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA
Sbjct: 61  NVPEPRMVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELSKVA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
             YAE +++S+RNIRRDGMD +KK++  G  SED     E ++Q+ITD  IK ID     
Sbjct: 121 GQYAEHARVSIRNIRRDGMDQIKKAKADG-LSEDDQKLWEGEVQEITDRYIKGIDDQLAT 179

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 180 KQAEIMQV 187


>gi|15603852|ref|NP_246926.1| ribosome recycling factor [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431830|sp|P57984|RRF_PASMU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|12722427|gb|AAK04071.1| Errf [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 185

 Score =  243 bits (622), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++   K  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L 
Sbjct: 7   KDTQLRMEKSLETFKNHIAKVRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ KI
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEAEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     +++IQKITD+ +K +D    +K+KE++ F
Sbjct: 127 AVRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDTFVKKVDEVLADKEKELLDF 185


>gi|302383605|ref|YP_003819428.1| ribosome recycling factor [Brevundimonas subvibrioides ATCC 15264]
 gi|302194233|gb|ADL01805.1| ribosome recycling factor [Brevundimonas subvibrioides ATCC 15264]
          Length = 185

 Score =  243 bits (622), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 96/181 (53%), Positives = 126/181 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL+  +DRM   ++ LK++   LRTGR +  +LD V+V+AYGS  PLN VA ++V EPRM
Sbjct: 5   DLKTYRDRMDRAVTSLKEEFQGLRTGRANAGLLDPVQVQAYGSTSPLNAVAAISVPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + VSVWDK MV  VE+ I  + LGLNPIV+GQ LRIPVP  TEERR  L K+A  YAE+ 
Sbjct: 65  ISVSVWDKSMVGPVEKAIRAAGLGLNPIVDGQTLRIPVPPLTEERRKELAKLAGKYAEQQ 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           KI+VRN+RRD  D LKK+ K+G+ S+D    +E ++QK TD+ IK ID   + K+ EIM 
Sbjct: 125 KIAVRNVRRDANDDLKKAEKAGEISQDDQKKMETEVQKDTDAAIKRIDETLKTKEVEIMQ 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|163801782|ref|ZP_02195679.1| ribosome releasing factor [Vibrio sp. AND4]
 gi|159174290|gb|EDP59094.1| ribosome releasing factor [Vibrio sp. AND4]
          Length = 185

 Score =  243 bits (622), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLAKVRTGRAHPSLLSGISVEYYGASTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE +++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     +++IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANSDLKGLLKDKEISEDEDRKAQDEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|237808853|ref|YP_002893293.1| ribosome recycling factor [Tolumonas auensis DSM 9187]
 gi|259494557|sp|C4L861|RRF_TOLAT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|237501114|gb|ACQ93707.1| ribosome recycling factor [Tolumonas auensis DSM 9187]
          Length = 185

 Score =  243 bits (622), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 81/178 (45%), Positives = 112/178 (62%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + KDRM  ++  LK  M  +RTGR  P++LD + VE YGS  PL QVANV   + R L V
Sbjct: 8   DAKDRMTKSVDSLKSHMSKIRTGRAQPALLDGIMVEYYGSATPLRQVANVVAEDSRTLAV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           SV+D+ M+ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  A AE++++S
Sbjct: 68  SVFDRSMIQAVEKAIMTSDLGLNPSSAGTTIRVPLPALTEERRKDLIKLVRAEAEQARVS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRN+RRD    LK   K    SED     + +IQK+TDS +K +D     K+KE+M  
Sbjct: 128 VRNVRRDCNADLKALLKDKDISEDDDRRAQEEIQKLTDSFVKLVDDLLAAKEKELMEI 185


>gi|332289930|ref|YP_004420782.1| ribosome recycling factor [Gallibacterium anatis UMN179]
 gi|330432826|gb|AEC17885.1| ribosome recycling factor [Gallibacterium anatis UMN179]
          Length = 185

 Score =  243 bits (622), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              + RM  ++  LK  +  +RTGR  PS+LD + VE YG+  PL QVANV   + R L 
Sbjct: 7   DEAQQRMEKSVEALKNQISKIRTGRAHPSLLDGIHVEYYGAATPLRQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ ++++VE+ I  S+LGLNP   G V+R+P+P  TEERR  L K+  A AE+ ++
Sbjct: 67  ITVFDRSLISAVEKAIMASDLGLNPASAGTVIRVPLPPLTEERRRDLTKIVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  D +K   K  + SE+     +++IQK+TD  +K +D    EK+KE+M F
Sbjct: 127 AVRNIRRDANDKIKALLKEKEISENDERKAQDEIQKLTDLYVKKVDEALAEKEKELMDF 185


>gi|117928746|ref|YP_873297.1| ribosome recycling factor [Acidothermus cellulolyticus 11B]
 gi|166230403|sp|A0LV51|RRF_ACIC1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|117649209|gb|ABK53311.1| ribosome recycling factor [Acidothermus cellulolyticus 11B]
          Length = 185

 Score =  243 bits (622), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M    +  +++   +RTGR +P++   + VE YG+  PLNQ+A+ TV + R++
Sbjct: 6   LLEAEEKMEKATNVARENFAAIRTGRANPALFSKITVEYYGTPTPLNQLASFTVADARLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  + ++E+ I +S+LG+NP  +G V+R+ +P  TEERR   +K+A   AE+++
Sbjct: 66  VIHPYDKGSLRAIEKAIRDSDLGVNPTDDGSVIRVAIPPLTEERRRDYIKMARHEAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR   D L K +K G+  ED V   E ++ ++T   + +ID   + K+ E++  
Sbjct: 126 VAIRNIRRHAKDALDKLQKDGEVGEDDVRRAEKELDELTHKYVAHIDEMLKHKEAELLEV 185


>gi|103487441|ref|YP_617002.1| ribosome recycling factor [Sphingopyxis alaskensis RB2256]
 gi|122984925|sp|Q1GRQ3|RRF_SPHAL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|98977518|gb|ABF53669.1| ribosome recycling factor [Sphingopyxis alaskensis RB2256]
          Length = 184

 Score =  243 bits (622), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 90/180 (50%), Positives = 127/180 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  +++ RM   +  LK D+  LRTGR + ++LD V VE YGS +PLNQ+A+++V EPR
Sbjct: 4   YDKADLERRMHGAVESLKHDLAGLRTGRANAALLDPVTVEVYGSQMPLNQIASISVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V VWDK  V  V++ I  + LGLNPIV+GQ+LR+P+PE T+ERR  L K+A  YAEK
Sbjct: 64  MLSVQVWDKANVGPVDKAIRSAGLGLNPIVDGQMLRLPIPEMTQERRKELSKLAGQYAEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMD+LK+     + SED     E ++QK+TD+TI  ID+    K+KEI+
Sbjct: 124 ARVAVRNVRRDGMDNLKQDENKKEISEDERKRHETEVQKLTDATIAEIDAAATAKEKEIL 183


>gi|88706580|ref|ZP_01104283.1| Ribosome recycling factor [Congregibacter litoralis KT71]
 gi|88699076|gb|EAQ96192.1| Ribosome recycling factor [Congregibacter litoralis KT71]
          Length = 185

 Score =  243 bits (621), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM +++  L  +   +RTGR  PS+LD +KV  YG+  PLNQVANV V + R L 
Sbjct: 7   KDADSRMQNSLEALGTNFNKIRTGRAHPSLLDGIKVSYYGADTPLNQVANVNVEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WD+ M+  +ER I +S+LGLNP   G+V+RIP+P  TEE R   +K A + AE +++
Sbjct: 67  LTAWDRSMIPDIERAIMKSDLGLNPATAGEVIRIPMPALTEETRKGYIKQARSEAEAARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN RRD M  LK   K  + SED     ++ IQK+TDS +  ++     K+ +++  
Sbjct: 127 SIRNARRDAMGMLKDMVKDKEISEDDERRGQDQIQKLTDSFVARVEEMLTAKEADLLEI 185


>gi|229513899|ref|ZP_04403361.1| ribosome recycling factor [Vibrio cholerae TMA 21]
 gi|229349080|gb|EEO14037.1| ribosome recycling factor [Vibrio cholerae TMA 21]
          Length = 185

 Score =  243 bits (621), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNGLSKIRTGRAHPSLLMGISVDYYGAPTPLNQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDRELTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + +IQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDVLAVKEKELMEV 185


>gi|91223476|ref|ZP_01258741.1| ribosome releasing factor [Vibrio alginolyticus 12G01]
 gi|262393522|ref|YP_003285376.1| ribosome recycling factor [Vibrio sp. Ex25]
 gi|91191562|gb|EAS77826.1| ribosome releasing factor [Vibrio alginolyticus 12G01]
 gi|262337116|gb|ACY50911.1| ribosome recycling factor [Vibrio sp. Ex25]
          Length = 185

 Score =  243 bits (621), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKIRTGRAHPSLLSGISVEYYGAATPLNQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAIMTSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     +++IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDEDRKAQDEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|126657954|ref|ZP_01729107.1| ribosome releasing factor [Cyanothece sp. CCY0110]
 gi|126620894|gb|EAZ91610.1| ribosome releasing factor [Cyanothece sp. CCY0110]
          Length = 181

 Score =  243 bits (621), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++KD M  ++   ++   T+RTGR + S+LD V VE YG+  PL Q+AN++  +   +
Sbjct: 2   LDDLKDNMQKSVEATQRSFNTIRTGRANASILDRVTVEYYGTETPLYQLANISTPDATTI 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +  +E+ I  S++GL P  +G V+R+ +P  TEERR  LVK+A   AE+ K
Sbjct: 62  MIQPYDKGSMGQIEKAIQMSDVGLTPNNDGNVIRLNIPPLTEERRKDLVKLASKMAEEGK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +D ++K  K+   SED    L++DIQK+TD   + ID     K+K+IM  
Sbjct: 122 VAIRNIRRDAIDDVRKQEKNSDISEDESRGLQDDIQKVTDQFTEKIDDLLTAKEKDIMTV 181


>gi|157372022|ref|YP_001480011.1| ribosome recycling factor [Serratia proteamaculans 568]
 gi|166991559|sp|A8GIE3|RRF_SERP5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157323786|gb|ABV42883.1| ribosome recycling factor [Serratia proteamaculans 568]
          Length = 185

 Score =  243 bits (621), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM  ++   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7   KDADSRMEKSVEAFKNQISKIRTGRASPSILDGIMVEYYGASTPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+    AE+ ++
Sbjct: 67  INVFDRSISAAVEKAIMSSDLGLNPSSAGSDIRVPLPALTEERRKDLIKIVRNEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SED     ++D+QK+TD+ IK +D+   +K+KE+M F
Sbjct: 127 AVRNVRRDANDKVKALLKDKEISEDEDRRSQDDVQKLTDAYIKLLDAALADKEKELMEF 185


>gi|310764947|gb|ADP09897.1| ribosome recycling factor [Erwinia sp. Ejp617]
          Length = 185

 Score =  243 bits (621), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + V+ YGS  PL Q+A+VTV + R L 
Sbjct: 7   KDAETRMEKCVEAFKNHISKIRTGRASPSILDGIMVDYYGSATPLRQLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  INVFDRSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D LK   K  + SED     + D+QK+TD  IK +D+   +K+ E+M F
Sbjct: 127 SVRNVRRDANDKLKALLKDKEISEDDDRRAQEDVQKMTDIFIKKVDASLADKETELMDF 185


>gi|238019366|ref|ZP_04599792.1| hypothetical protein VEIDISOL_01230 [Veillonella dispar ATCC 17748]
 gi|237864065|gb|EEP65355.1| hypothetical protein VEIDISOL_01230 [Veillonella dispar ATCC 17748]
          Length = 186

 Score =  243 bits (621), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 83/180 (46%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  ++RM  +I  LK +  ++RTGR S ++LD V V+ YGS  P+NQVAN++V EPRM+
Sbjct: 7   LQQAEERMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK M+ ++E+ I +S+LGLNP  +G  +R+ +P+ TEERR  +VKV H  AE +K
Sbjct: 67  VIAPWDKTMIGAIEKAILQSDLGLNPGNDGAQIRLTIPQLTEERRKEIVKVVHKKAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+   +ED      + IQK+TD+ IK ID     K+K+++  
Sbjct: 127 VAVRNIRRDVNDALKKEEKAKTITEDDAKDGLDQIQKLTDAKIKQIDELKAVKEKDVLEV 186


>gi|257065047|ref|YP_003144719.1| ribosome recycling factor [Slackia heliotrinireducens DSM 20476]
 gi|256792700|gb|ACV23370.1| ribosome recycling factor [Slackia heliotrinireducens DSM 20476]
          Length = 184

 Score =  243 bits (621), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M ++  L + +  M + I  LK    ++RTGR +  +LD ++V+ YG   P+NQ+A V V
Sbjct: 1   MEEI--LADAEIGMDEAIDNLKTAFASVRTGRANAMVLDKIRVDYYGVPTPINQMAAVKV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E  ML V  WDK M+ +VE  I  S+LG+ P  +G V+R+P P  TEERR  L K  H 
Sbjct: 59  PEAHMLTVEPWDKSMLRAVEAAIMASDLGITPSNDGHVIRLPFPVLTEERRKELAKTCHT 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ +I++RN+RR+    + K +K+ +  ED     E  +QK+TDS +K +D   + K+
Sbjct: 119 YAEECRIAIRNVRREANAKIDKGKKASEIPEDDARRGEEQVQKLTDSYVKKVDELLKAKE 178

Query: 181 KEIMHF 186
            E+M  
Sbjct: 179 AEVMSI 184


>gi|123443482|ref|YP_001007455.1| ribosome recycling factor [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332160595|ref|YP_004297172.1| ribosome recycling factor [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166231529|sp|A1JP79|RRF_YERE8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122090443|emb|CAL13311.1| ribosome recycling factor [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318606927|emb|CBY28425.1| ribosome recycling factor [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325664825|gb|ADZ41469.1| ribosome recycling factor [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859602|emb|CBX69942.1| ribosome-recycling factor [Yersinia enterocolitica W22703]
          Length = 185

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L 
Sbjct: 7   KDTEVRMEKCLEVFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  LTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  + +K   K  + SED     ++DIQK+TD+ IK +D+    K+ E+M F
Sbjct: 127 SIRNVRRDANEKVKALLKDKEISEDEDRRSQDDIQKLTDAFIKKVDAALAAKETELMDF 185


>gi|85373585|ref|YP_457647.1| ribosome recycling factor [Erythrobacter litoralis HTCC2594]
 gi|122544868|sp|Q2NBU1|RRF_ERYLH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|84786668|gb|ABC62850.1| ribosome recycling factor [Erythrobacter litoralis HTCC2594]
          Length = 185

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 93/180 (51%), Positives = 126/180 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  +I+ RM   +  LK D+  LRTGR + S+LD V VE YG+ +PLNQVA V   EPR
Sbjct: 4   YDKADIERRMAGAVESLKSDLSGLRTGRANTSLLDPVVVEVYGAMMPLNQVATVNAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V VWDK  V++VE+GI ++NLGLNP+ +GQ +R+P+P+ TEERR  L K+A  YAEK
Sbjct: 64  MLAVQVWDKANVSAVEKGITKANLGLNPMTDGQTVRLPMPDLTEERRKELAKLAGQYAEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +KI++RN+RRDGM+ LK   K+   SED    +E+++QK+TD  +   DS  E K+KEIM
Sbjct: 124 AKIAIRNVRRDGMEDLKADEKAKDISEDDRKRMEDEVQKLTDKYVAEADSAAEAKEKEIM 183


>gi|49475413|ref|YP_033454.1| ribosome recycling factor [Bartonella henselae str. Houston-1]
 gi|60390254|sp|Q6G5C6|RRF_BARHE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|49238219|emb|CAF27429.1| Ribosome recycling factor [Bartonella henselae str. Houston-1]
          Length = 186

 Score =  243 bits (621), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 98/186 (52%), Positives = 129/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    + ++K RM   IS  K ++  LRTGR S S+L+ + VEAYGS V +NQVAN++V
Sbjct: 1   MSVTSIMDDLKRRMHGAISAFKHELGGLRTGRASASLLEPLTVEAYGSVVHINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PEPRMLSVSVWDKTMVGAVERAIRDSGLGLNPITDGMNLRIPLPELNEERRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+++++ R++RRDGMD+LKK  K G+  +D    L   +QK+TD TI +ID     K+
Sbjct: 121 YAEQARVATRHVRRDGMDNLKKLEKEGEIGQDEAHGLSEKVQKLTDETIADIDKILAVKE 180

Query: 181 KEIMHF 186
            EIMH 
Sbjct: 181 SEIMHV 186


>gi|302339357|ref|YP_003804563.1| ribosome recycling factor [Spirochaeta smaragdinae DSM 11293]
 gi|301636542|gb|ADK81969.1| ribosome recycling factor [Spirochaeta smaragdinae DSM 11293]
          Length = 184

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + RM  +IS L  D   LRTGR S ++ D +KV+ YG   PL+Q A ++V E R++
Sbjct: 5   LKDAESRMKKSISALGDDFNGLRTGRASAALFDKIKVDYYGQSTPLSQAATISVPEARLV 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  +ER I +S L +NP  +G+V+RI +P  TEERR  LVKVA   AE+ K
Sbjct: 65  VIQPWDKGLLGEIERAIQKSELSVNPNNDGKVIRINIPPLTEERRKELVKVAKNQAEQCK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  + LKK +KSG  SED      ++IQK+TD  ++      E K++EIM  
Sbjct: 125 VAIRNIRRDANEELKKIQKSGDISEDEEKRGADEIQKLTDKHVEEAGKLLEAKEQEIMEV 184


>gi|144897597|emb|CAM74461.1| Ribosome recycling factor [Magnetospirillum gryphiswaldense MSR-1]
          Length = 190

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 87/179 (48%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +++  RM +T+  LKK+   LR+GR   S+L+ V VEAYG  +P+ Q   + V EPRML 
Sbjct: 12  KDVAHRMDNTVEVLKKEFSGLRSGRAVASLLEPVVVEAYGQTMPITQCGTIAVPEPRMLT 71

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK  V +VE+ I E+ LGLNP  +GQ++R+P+P   EERR  L KVA  YAE+++I
Sbjct: 72  VQVWDKGQVKAVEKAIREAGLGLNPQTDGQLVRVPIPSLNEERRKELQKVAGKYAEQARI 131

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRDGMD LKK  K G  SED +   E ++Q +TD TIK +D     K+KEIM  
Sbjct: 132 AIRNVRRDGMDTLKKMEKDGHISEDEIKKHEKEVQSLTDDTIKKVDETLAHKEKEIMQV 190


>gi|161524433|ref|YP_001579445.1| ribosome recycling factor [Burkholderia multivorans ATCC 17616]
 gi|189350812|ref|YP_001946440.1| ribosome recycling factor [Burkholderia multivorans ATCC 17616]
 gi|221198319|ref|ZP_03571365.1| ribosome recycling factor [Burkholderia multivorans CGD2M]
 gi|221208258|ref|ZP_03581262.1| ribosome recycling factor [Burkholderia multivorans CGD2]
 gi|221215460|ref|ZP_03588424.1| ribosome recycling factor [Burkholderia multivorans CGD1]
 gi|238687071|sp|A9AIL7|RRF_BURM1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|160341862|gb|ABX14948.1| ribosome recycling factor [Burkholderia multivorans ATCC 17616]
 gi|189334834|dbj|BAG43904.1| ribosome recycling factor [Burkholderia multivorans ATCC 17616]
 gi|221164644|gb|EED97126.1| ribosome recycling factor [Burkholderia multivorans CGD1]
 gi|221171906|gb|EEE04349.1| ribosome recycling factor [Burkholderia multivorans CGD2]
 gi|221182251|gb|EEE14652.1| ribosome recycling factor [Burkholderia multivorans CGD2M]
          Length = 186

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPPLTEERRRELTKVVKGEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM  
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQTKEAEIMTV 186


>gi|260897261|ref|ZP_05905757.1| ribosome recycling factor [Vibrio parahaemolyticus Peru-466]
 gi|308085361|gb|EFO35056.1| ribosome recycling factor [Vibrio parahaemolyticus Peru-466]
          Length = 180

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 2   KDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAATPLNQVANVVAEDARTLA 61

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 62  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 121

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + +IQK+TD  +K ID     K+KE+M  
Sbjct: 122 AVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKELMEV 180


>gi|329850619|ref|ZP_08265464.1| ribosome recycling factor [Asticcacaulis biprosthecum C19]
 gi|328840934|gb|EGF90505.1| ribosome recycling factor [Asticcacaulis biprosthecum C19]
          Length = 185

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 94/181 (51%), Positives = 118/181 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL   KDRM   +  LK+D   LRTGR S S+LD V V+AYGS +PLN  A V+V E RM
Sbjct: 5   DLNRYKDRMDKAVVALKEDYSGLRTGRASASLLDQVVVDAYGSTMPLNACAAVSVPEARM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + VSVWD+ +  SVE+ I  + LGLNPI +GQ LRIP+P  TEERR  LVK+A  YAE  
Sbjct: 65  ISVSVWDRGLTVSVEKAIRNAGLGLNPITDGQTLRIPIPPLTEERRKELVKIAGKYAETQ 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++VRN+RR+ MD LKK+ K+   SED       +IQ  TDS IK ID   + K+ EIM 
Sbjct: 125 RVAVRNVRREAMDDLKKAEKASDISEDEEKKGGTEIQGFTDSAIKRIDEVLKAKEAEIMQ 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|23099044|ref|NP_692510.1| ribosome recycling factor [Oceanobacillus iheyensis HTE831]
 gi|33301568|sp|Q8EQV0|RRF_OCEIH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|22777272|dbj|BAC13545.1| ribosome recycling factor [Oceanobacillus iheyensis HTE831]
          Length = 185

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 71/181 (39%), Positives = 117/181 (64%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+ ++ +M   +  L K++ ++R GR +PS+LD V V+ YG+  PLNQ+A+V   E R+
Sbjct: 5   ELKEMEQKMEQAVQALSKNLASVRAGRANPSILDSVFVDYYGASTPLNQLASVGAPEARL 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L ++ +DK  +  +E+ I +++LGL+P  +G ++RI +P  T+ERR  LVKV   Y+E++
Sbjct: 65  LTITPYDKSAIGDIEKAIQKADLGLSPSSDGNIIRINIPALTQERRKDLVKVVGKYSEEA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+ +RNIRRD  D LKK  K+G  +ED +   ++D+Q  T+  I  ID   + K+ EIM 
Sbjct: 125 KVQIRNIRRDTNDQLKKMEKNGDLTEDDLRGFQDDVQTSTNDYINKIDQLAKNKENEIME 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|330993376|ref|ZP_08317311.1| Ribosome-recycling factor [Gluconacetobacter sp. SXCC-1]
 gi|329759406|gb|EGG75915.1| Ribosome-recycling factor [Gluconacetobacter sp. SXCC-1]
          Length = 188

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 84/180 (46%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++  RM   I  L++D   LR+GR SP++L+ V+VEAYG  VPL QV ++ V E RML
Sbjct: 9   LADLTRRMDGAIESLRRDFAGLRSGRASPALLEPVRVEAYGGEVPLTQVGSIAVPEARML 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWD+ +V +VER I ++ LGLNP  +GQ +R+P+P+ TEERR  L + A  YAE  +
Sbjct: 69  TVQVWDRTLVGAVERAIRDAGLGLNPAADGQTVRVPIPQLTEERRNELARAAGKYAENGR 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VR +RRDGMD  +K  K+G  SED V +  + IQK+TD  ++ +D    EK++EI   
Sbjct: 129 IAVRGVRRDGMDQTRKLEKAGDISEDDVKTWSDAIQKLTDQYVRRVDELLVEKEREIKQV 188


>gi|172057857|ref|YP_001814317.1| ribosome recycling factor [Exiguobacterium sibiricum 255-15]
 gi|229564225|sp|B1YI73|RRF_EXIS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|171990378|gb|ACB61300.1| ribosome recycling factor [Exiguobacterium sibiricum 255-15]
          Length = 185

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 119/186 (63%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+Q I ++  ++RM      LKK++ TLR GR + S+LD V+V+ YGS  PLNQVANV  
Sbjct: 1   MSQAI-MKQAEERMEKAHLSLKKELATLRAGRANVSILDPVQVDYYGSPTPLNQVANVNT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+++++ WDK MV  +E+ I  ++LGL P  +G V+R+ +P  TE+RR  LVK+   
Sbjct: 60  PEARLILITPWDKSMVTEIEKAIQRADLGLAPSSDGTVIRLAIPPLTEDRRKELVKLVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E+ K+++RNIRRD  + LKK  K G  +ED +     D+Q +TD  +K +D    +K+
Sbjct: 120 YTEEGKVALRNIRRDTNEQLKKQEKDGVLTEDDLRGYTEDVQTLTDKFVKVLDQTAADKE 179

Query: 181 KEIMHF 186
           +EIM  
Sbjct: 180 QEIMEV 185


>gi|164687908|ref|ZP_02211936.1| hypothetical protein CLOBAR_01553 [Clostridium bartlettii DSM
           16795]
 gi|164602321|gb|EDQ95786.1| hypothetical protein CLOBAR_01553 [Clostridium bartlettii DSM
           16795]
          Length = 184

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  TI  LK +  T+R GR +  MLD ++V+ YG+  P+NQ+ +++V EPR LV
Sbjct: 6   KKLQAQMDKTIEALKYEFSTIRAGRANAQMLDKIRVDYYGTPTPINQIGSISVPEPRTLV 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WDK  +  +E+ I  S+LGLNP  +G V+R+ VP  TEERR+ L K A   AE+ K+
Sbjct: 66  INPWDKSAMKEIEKAIMNSDLGLNPTNDGDVIRLNVPALTEERRIELTKKAKKAAEEFKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RN RRD  D LKK +K G+ +ED +   + D+QK+TD  IK IDS    K+K+IM  
Sbjct: 126 RIRNERRDANDKLKKMQKDGEITEDELKRGQEDVQKLTDKYIKEIDSLLAVKEKDIMAV 184


>gi|187928370|ref|YP_001898857.1| ribosome recycling factor [Ralstonia pickettii 12J]
 gi|238691813|sp|B2UB09|RRF_RALPJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|187725260|gb|ACD26425.1| ribosome recycling factor [Ralstonia pickettii 12J]
          Length = 186

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I  LK D+  +RTGR    +LD V+V+ YGS VP++QVANVT+++ R + 
Sbjct: 8   KNAEQKMQKSIEALKTDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANVTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I E++LGLNP   G ++R+P P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKKMVQAVEKAIREADLGLNPATMGDIIRVPTPALTEERRKELTKVVKGEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K    SED      +++QK+TD  +  ID    EK KEIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKAISEDDERRGGDEVQKLTDKFVAEIDKLVAEKDKEIMTV 186


>gi|330817436|ref|YP_004361141.1| Ribosome releasing factor [Burkholderia gladioli BSR3]
 gi|327369829|gb|AEA61185.1| Ribosome releasing factor [Burkholderia gladioli BSR3]
          Length = 186

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+ + R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLADARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I ES+LGLNP   G  +R+P+P  TEERR  L KV  + AE +K+
Sbjct: 68  VQPWEKPMVAKVEKAIRESDLGLNPATSGDAIRVPMPALTEERRRELAKVVKSEAETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRASDDVQKLTDKYVAEIDKLAQTKEAEIMTV 186


>gi|309782134|ref|ZP_07676864.1| ribosome recycling factor [Ralstonia sp. 5_7_47FAA]
 gi|308919200|gb|EFP64867.1| ribosome recycling factor [Ralstonia sp. 5_7_47FAA]
          Length = 186

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I  LK D+  +RTGR    +LD V+V+ YGS VP++QVANVT+++ R + 
Sbjct: 8   KNAEQKMQKSIEALKTDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANVTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I E++LGLNP   G ++R+P P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKKMVQAVEKAIREADLGLNPATMGDIIRVPTPALTEERRKELTKVVKGEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K    SED      +DIQK+TD  +  ID    EK KEIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKAISEDDERRGGDDIQKLTDKFVAEIDKLVAEKDKEIMTV 186


>gi|51892632|ref|YP_075323.1| ribosome recycling factor [Symbiobacterium thermophilum IAM 14863]
 gi|60390686|sp|Q67PB4|RRF_SYMTH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|51856321|dbj|BAD40479.1| ribosome recycling factor [Symbiobacterium thermophilum IAM 14863]
          Length = 185

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ ++RM   +   ++++  +R  R +P++LD V+VEAYGS VP+N VA + V +PR L
Sbjct: 6   IKDAEERMKKAVEVFRQELAGMRANRATPALLDKVRVEAYGSEVPVNNVATIEVPDPRTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD+ ++ ++ER I+ S+LGLNP  +GQV+R+ +P  TEERR  LVKV     E+ +
Sbjct: 66  VIKPWDRSLIKAIERAINASDLGLNPTNDGQVIRLSIPPMTEERRRELVKVVAKRTEEQR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  + +KK  K    SED     ++++QK+TD  IK +D     K+KEIM  
Sbjct: 126 VAIRNIRRDANEQIKKLEKDKAVSEDESKRAQDEVQKLTDKYIKEVDQLMAAKEKEIMEV 185


>gi|222529797|ref|YP_002573679.1| ribosome recycling factor [Caldicellulosiruptor bescii DSM 6725]
 gi|312127157|ref|YP_003992031.1| ribosome recycling factor [Caldicellulosiruptor hydrothermalis 108]
 gi|312621978|ref|YP_004023591.1| ribosome recycling factor [Caldicellulosiruptor kronotskyensis
           2002]
 gi|254809487|sp|B9MKP8|RRF_ANATD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|222456644|gb|ACM60906.1| ribosome recycling factor [Caldicellulosiruptor bescii DSM 6725]
 gi|311777176|gb|ADQ06662.1| ribosome recycling factor [Caldicellulosiruptor hydrothermalis 108]
 gi|312202445|gb|ADQ45772.1| ribosome recycling factor [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 184

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M   I  LK++  T+R GR +P +LD V V+ YG   P+ QVA++TV E RM+
Sbjct: 5   IQVAEEKMKKAIETLKEEFATIRAGRANPHILDKVMVDYYGVPTPIPQVASITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W+  M+  +E+ I +S+LG+NP  +G+V+R+  PE TEERR  LVK     AE +K
Sbjct: 65  VIQPWEARMLKEIEKAIQKSDLGVNPTNDGKVIRLIFPELTEERRKELVKQVKKMAEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+ +D  KK +K+ + +ED +   E D+QK+ D  I+ I+     K+KEIM  
Sbjct: 125 VAIRNIRREALDEYKKMKKNNEITEDDLKDAEEDVQKLHDKYIEQIEKLLSAKEKEIMEV 184


>gi|86138423|ref|ZP_01056997.1| ribosome recycling factor [Roseobacter sp. MED193]
 gi|85824948|gb|EAQ45149.1| ribosome recycling factor [Roseobacter sp. MED193]
          Length = 187

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 86/182 (47%), Positives = 122/182 (67%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ LK +  +LRTGR S +ML+ V VEAYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMANLKTEFASLRTGRASGAMLEPVMVEAYGSMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I  S LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVGPVEKAIRNSGLGINPQLNGTIIMLPIPELNEERRRELGKVAGQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            ++S+RN+RRDGMD +KK++  G  SED     E+++Q +TD+ IK++D   E K+ EIM
Sbjct: 127 CRVSIRNVRRDGMDQIKKAKSDG-MSEDDQKFWESEVQDLTDAMIKSVDDALEHKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|260772225|ref|ZP_05881141.1| ribosome recycling factor [Vibrio metschnikovii CIP 69.14]
 gi|260611364|gb|EEX36567.1| ribosome recycling factor [Vibrio metschnikovii CIP 69.14]
          Length = 185

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PL+Q+ANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKIRTGRAHPSLLSGLSVEYYGASTPLSQIANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAILMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     +++IQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDEERKAQDEIQKLTDAAVKKIDDILAVKEKELMEV 185


>gi|56751022|ref|YP_171723.1| ribosome recycling factor [Synechococcus elongatus PCC 6301]
 gi|81299318|ref|YP_399526.1| ribosome recycling factor [Synechococcus elongatus PCC 7942]
 gi|60390663|sp|Q5N3B7|RRF_SYNP6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123557390|sp|Q31QY0|RRF_SYNE7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56685981|dbj|BAD79203.1| ribosome recycling factor [Synechococcus elongatus PCC 6301]
 gi|81168199|gb|ABB56539.1| ribosome recycling factor [Synechococcus elongatus PCC 7942]
          Length = 182

 Score =  243 bits (620), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++  M  ++    +   T+RTGR + S+LD + V+ YGS  PL  +A+++  +   L
Sbjct: 3   LADVESTMQKSVEATLRSFNTIRTGRANASLLDKIVVDYYGSETPLKSLASISTPDASTL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  + ++E+ I  S++GL P  +GQ++R+ +P  T +RR  LVK+A  YAE+ K
Sbjct: 63  QIQPFDRSSMGAIEKAISLSDIGLTPNNDGQIIRLNIPPLTSDRRKELVKLAAKYAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRD +D ++K  KSG+ SED     ++ +QK+TD     ++    +K+K+IM  
Sbjct: 123 VAIRNVRRDAIDSIRKLEKSGEISEDDARDQQDQVQKLTDKFSAKVEQLLSDKEKDIMTV 182


>gi|53805188|ref|YP_113089.1| ribosome recycling factor [Methylococcus capsulatus str. Bath]
 gi|60390238|sp|Q60BA7|RRF_METCA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|53758949|gb|AAU93240.1| ribosome recycling factor [Methylococcus capsulatus str. Bath]
          Length = 185

 Score =  242 bits (619), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 76/175 (43%), Positives = 109/175 (62%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  +I  LK +   +RTGR  PS+L+ ++V  YG+ VPL QVANV V + R L V+ W
Sbjct: 11  ERMQKSIEALKHEFAKIRTGRAHPSLLEHIRVSYYGNEVPLTQVANVAVEDARSLAVTPW 70

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           ++ MV ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV    AE  ++++RN
Sbjct: 71  ERNMVQAIEKAIMTSDLGLNPSTAGTVIRVPLPPLTEERRRDLIKVVRQEAENGRVAIRN 130

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IRRD  + LK + K    SED     +  IQK TD  IK ID   E+K+ +++  
Sbjct: 131 IRRDANNELKAALKEKLISEDEDRRSQEQIQKTTDQFIKEIDKLLEQKEADLLAV 185


>gi|312796247|ref|YP_004029169.1| ribosome Recycling Factor (RRF) [Burkholderia rhizoxinica HKI 454]
 gi|312168022|emb|CBW75025.1| Ribosome Recycling Factor (RRF) [Burkholderia rhizoxinica HKI 454]
          Length = 186

 Score =  242 bits (619), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++   K D+  +RTGR    +LD ++V+ YGS+VP++QVAN+T+++ R + 
Sbjct: 8   KGAEQKMQRSLEAFKSDLAKIRTGRAHTGLLDHIQVDYYGSNVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MVA VE+ I ES+LGLNP  +G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKKMVAVVEKAIRESDLGLNPATQGDLIRVPMPALTEERRRELTKVVKSEGESAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D LKK  K    SED     ++++QK+TD  +  I+   + K+ EIM  
Sbjct: 128 AVRNLRRDANDQLKKLLKDKDISEDDERRAQDEVQKLTDKFVAEIEKLVQTKETEIMTV 186


>gi|315499832|ref|YP_004088635.1| ribosome recycling factor [Asticcacaulis excentricus CB 48]
 gi|315417844|gb|ADU14484.1| ribosome recycling factor [Asticcacaulis excentricus CB 48]
          Length = 185

 Score =  242 bits (619), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 86/181 (47%), Positives = 117/181 (64%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL   KDRM  +++ LK D   LRTGR S  +L+ + V+AYGS + +   A ++V EPRM
Sbjct: 5   DLNKYKDRMDKSVTALKDDFGGLRTGRASAGLLEGITVDAYGSAMSILSCAAISVPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V+VWDK +V SVE+ I  S LGLNP+ +GQ LR+P+P  TEERR  L K+A  YAE+ 
Sbjct: 65  ISVNVWDKGLVVSVEKAIRNSGLGLNPVTDGQTLRVPIPPLTEERRKELAKIAGKYAEEK 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++VRN+RRD  D LKK+ K    SED    +  ++QK TD  IK ID   + K+ EIM 
Sbjct: 125 RVAVRNVRRDANDELKKAEKDSLISEDEQKKMTTEVQKFTDEAIKRIDEMLKVKEAEIMQ 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|167586858|ref|ZP_02379246.1| ribosome recycling factor [Burkholderia ubonensis Bu]
          Length = 186

 Score =  242 bits (619), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM  
Sbjct: 128 AIRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKHVTEIDKLVQSKEAEIMTV 186


>gi|241662946|ref|YP_002981306.1| ribosome recycling factor [Ralstonia pickettii 12D]
 gi|240864973|gb|ACS62634.1| ribosome recycling factor [Ralstonia pickettii 12D]
          Length = 186

 Score =  242 bits (619), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I  LK D+  +RTGR    +LD V+V+ YGS VP++QVANVT+++ R + 
Sbjct: 8   KNAEQKMQKSIDALKTDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANVTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I E++LGLNP   G ++R+P P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKKMVQAVEKAIREADLGLNPATMGDIIRVPTPALTEERRKELTKVVKGEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K    SED      +DIQK+TD  +  ID    EK KEIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKAISEDDERRGGDDIQKLTDKFVAEIDKLVAEKDKEIMTV 186


>gi|313893396|ref|ZP_07826968.1| ribosome recycling factor [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313442037|gb|EFR60457.1| ribosome recycling factor [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 186

 Score =  242 bits (619), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 82/180 (45%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  ++RM  +I  LK +  ++RTGR S ++LD V V+ YGS  P+NQVAN++V EPRM+
Sbjct: 7   LQQAEERMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK M+ ++E+ I +S+LGLNP  +G  +R+ +P+ TEERR  +VKV H  AE +K
Sbjct: 67  VIAPWDKTMIGAIEKAILQSDLGLNPGNDGAQIRLTIPQLTEERRKEIVKVVHKKAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+   +ED      ++IQK+TD+ +K+ID     K+K+++  
Sbjct: 127 VAVRNIRRDVNDALKKEEKAKTITEDDAKDGLDEIQKLTDAKVKHIDELKAVKEKDVLEV 186


>gi|270160174|ref|ZP_06188830.1| ribosome recycling factor [Legionella longbeachae D-4968]
 gi|289165053|ref|YP_003455191.1| Ribosome recycling factor [Legionella longbeachae NSW150]
 gi|269988513|gb|EEZ94768.1| ribosome recycling factor [Legionella longbeachae D-4968]
 gi|288858226|emb|CBJ12094.1| Ribosome recycling factor [Legionella longbeachae NSW150]
          Length = 185

 Score =  242 bits (619), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  TI  L+ DM  +RTGR +  +LD V+V+ YG+  PL+QVANVT  + R ++
Sbjct: 7   QDSERRMKKTIEALRIDMSKIRTGRANVGLLDHVQVDYYGNLTPLSQVANVTASDSRTIL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K MV+++E+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ K+
Sbjct: 67  VTPWEKSMVSAIEKAILTSDLGLNPATTGNAIRVPMPPLTEERRKELIKVVRNEAEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  + LK   K    SED        IQK+TD  I  +D+   EK+K++M  
Sbjct: 127 SIRNIRRDANNQLKDLVKDKSISEDDERRAAEAIQKLTDKYILEVDALLAEKEKDLMEV 185


>gi|254513846|ref|ZP_05125907.1| ribosome recycling factor [gamma proteobacterium NOR5-3]
 gi|219676089|gb|EED32454.1| ribosome recycling factor [gamma proteobacterium NOR5-3]
          Length = 185

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +    RM +++  L  +   +RTGR  PS+LD +KV  YG+  PL+QVANV V + R L 
Sbjct: 7   KEADSRMKNSLEALGTNFNKIRTGRAHPSLLDGIKVSYYGADTPLSQVANVNVEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WD+ M+  +ER I +S+LGLNP   G+V+RIP+P  TEE R   +K A + AE +++
Sbjct: 67  LTAWDRSMIPDIERAIMKSDLGLNPATAGEVIRIPMPALTEETRKGYIKQARSEAEAARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN RRD M  LK+  K  +  ED     ++ IQK+TDS +  +D     K+ +++  
Sbjct: 127 SVRNARRDAMGMLKELVKDKEIGEDDERRGQDQIQKLTDSFVARVDEMLTAKEADLLEI 185


>gi|167950442|ref|ZP_02537516.1| ribosome recycling factor [Endoriftia persephone 'Hot96_1+Hot96_2']
 gi|110589434|gb|ABG77226.1| ribosome recycling factor [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 173

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 76/173 (43%), Positives = 110/173 (63%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++  L  ++  +RTGR  PS+LD +KV+ YGS  PLNQVAN+ + + R L V+ W+K
Sbjct: 1   MDKSVQALHNELAKIRTGRAHPSLLDHIKVDYYGSETPLNQVANINIEDARTLAVTPWEK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            MV +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  ++++A   AE ++++VRNIR
Sbjct: 61  TMVQAVEKAIMTSDLGLNPMSAGTVIRVPMPPLTEERRKDMIRIARNEAEGARVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD    LK   K    SED     +  IQK+TD  +K ID     K+K++M F
Sbjct: 121 RDANHDLKDLVKEKMISEDDERRGQEIIQKLTDQHVKTIDEVLAVKEKDLMEF 173


>gi|126654121|ref|ZP_01725939.1| Frr [Bacillus sp. B14905]
 gi|126589401|gb|EAZ83551.1| Frr [Bacillus sp. B14905]
          Length = 185

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  KD+M  TI+   +++ ++R GR + S+LD + V+ YG+  P+NQ+A V+V E R+L
Sbjct: 6   LEQAKDKMNKTIAAFTRELSSIRAGRANASLLDRIMVDYYGAPTPINQLAGVSVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK ++  +E+ I +S++G+ P  +G ++R+ +P  TEERR  LVK     AE +K
Sbjct: 66  VITPYDKTILGEIEKAIMKSDIGITPTNDGSIIRLMIPALTEERRKDLVKQVKKEAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RRD  D LKK  K+G+ +ED +    +DIQK+TD  I  +D   ++K+KEI+  
Sbjct: 126 IAVRNVRRDANDDLKKLEKAGEITEDDLRGYGDDIQKLTDEFIVKVDQVTKDKEKEILEV 185


>gi|218247353|ref|YP_002372724.1| ribosome recycling factor [Cyanothece sp. PCC 8801]
 gi|218167831|gb|ACK66568.1| ribosome recycling factor [Cyanothece sp. PCC 8801]
          Length = 181

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++D M  ++   ++   T+RTGR + S+LD V VE YG   PLNQ+AN+T  +   +
Sbjct: 2   LAELEDNMQKSVEATQRSFNTIRTGRANASLLDRVIVEYYGMETPLNQLANITTPDATTI 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK  + ++E+ I+ S+LGL P  +G+V+R+ +P  TEERR  LVK+A   AE+ K
Sbjct: 62  NILPYDKGSMGAIEKAINLSDLGLTPNNDGKVIRLNIPPLTEERRKELVKLAGKLAEEGK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRDG+D ++K  K+ + SED   +L+++IQKITD     ID   + K+K+IM  
Sbjct: 122 VAIRNIRRDGIDTVRKQEKNNEISEDESRNLQDEIQKITDKFTTKIDELLKVKEKDIMTV 181


>gi|257061312|ref|YP_003139200.1| ribosome recycling factor [Cyanothece sp. PCC 8802]
 gi|256591478|gb|ACV02365.1| ribosome recycling factor [Cyanothece sp. PCC 8802]
          Length = 181

 Score =  242 bits (619), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++D M  ++   ++   T+RTGR + S+LD V VE YG   PLNQ+AN+T  +   +
Sbjct: 2   LAELEDNMQKSVEATQRSFNTIRTGRANASLLDRVIVEYYGMETPLNQLANITTPDATTI 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK  + ++E+ I+ S+LGL P  +G+V+R+ +P  TEERR  LVK+A   AE+ K
Sbjct: 62  NILPYDKGSMGAIEKAINLSDLGLTPNNDGKVIRLNIPPLTEERRKELVKLAGKLAEEGK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRDG+D ++K  K+   SED   +L+++IQKITD     ID   + K+K+IM  
Sbjct: 122 VAIRNIRRDGIDTVRKQEKNNDISEDESRNLQDEIQKITDKFTTKIDELLKVKEKDIMTV 181


>gi|302872259|ref|YP_003840895.1| ribosome recycling factor [Caldicellulosiruptor obsidiansis OB47]
 gi|312135566|ref|YP_004002904.1| ribosome recycling factor [Caldicellulosiruptor owensensis OL]
 gi|312793072|ref|YP_004025995.1| ribosome recycling factor [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|302575118|gb|ADL42909.1| ribosome recycling factor [Caldicellulosiruptor obsidiansis OB47]
 gi|311775617|gb|ADQ05104.1| ribosome recycling factor [Caldicellulosiruptor owensensis OL]
 gi|312180212|gb|ADQ40382.1| ribosome recycling factor [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 184

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M   I  LK++  T+R GR +P +LD V V+ YG   P+ QVA++TV E RM+
Sbjct: 5   IQVAEEKMKKAIETLKEEFATVRAGRANPHILDKVMVDYYGVPTPIPQVASITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W+  M+  +E+ I +S+LG+NP  +G+V+R+  PE TEERR  LVK     AE +K
Sbjct: 65  VIQPWEARMLKEIEKAIQKSDLGVNPTNDGKVIRLIFPELTEERRKELVKQVKKMAEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+ +D  KK +K+ + +ED +   E D+QK+ D  I+ I+     K+KEIM  
Sbjct: 125 VAIRNIRREALDEYKKMKKNNEITEDDLKDAEEDVQKLHDKYIEQIEKLLSAKEKEIMEV 184


>gi|260433807|ref|ZP_05787778.1| ribosome recycling factor [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417635|gb|EEX10894.1| ribosome recycling factor [Silicibacter lacuscaerulensis ITI-1157]
          Length = 187

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 86/182 (47%), Positives = 126/182 (69%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D+ ++K RM   ++ L+ +  +LRTGR S SMLD + V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDIDDLKRRMEGAMANLRTEFASLRTGRASASMLDPIMVDAYGSMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKSLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAGHYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++ +G  SED     EN++Q++TD  IK +D+  E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKAKANG-LSEDDQKFWENEVQELTDQMIKAVDTALEAKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|325292740|ref|YP_004278604.1| Ribosome recycling factor [Agrobacterium sp. H13-3]
 gi|325060593|gb|ADY64284.1| Ribosome recycling factor [Agrobacterium sp. H13-3]
          Length = 185

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 109/182 (59%), Positives = 134/182 (73%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL +IK RM   I+  K D+ +LRTGR S ++LD V +EAYGS VPLNQVAN+TV EPR
Sbjct: 4   IDLNDIKRRMDGAINAFKSDIASLRTGRASANILDPVTIEAYGSRVPLNQVANITVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V++WDK MV +V+R I ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH YAEK
Sbjct: 64  MLGVNIWDKSMVNAVDRAIRESNLGLNPIVDGQNLRIPLPELNEERRKSLVKVAHDYAEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           SK+++R++RRDGMD LKK+ K G   +D        +QKITD TI  I+    EK+KEIM
Sbjct: 124 SKVAIRHVRRDGMDGLKKAEKDGDIGQDESRGQSEKVQKITDDTISEIERLLGEKEKEIM 183

Query: 185 HF 186
             
Sbjct: 184 QV 185


>gi|114566420|ref|YP_753574.1| ribosome recycling factor [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318505|sp|Q0AYK1|RRF_SYNWW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114337355|gb|ABI68203.1| ribosome recycling factor [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 185

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 85/180 (47%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM  TI  L+KD+ +LR GR +P+ML+ + V+ YG   P+NQ+AN+TV E R+L
Sbjct: 6   LSDTEERMKKTIEHLRKDLASLRAGRANPAMLEKIMVDYYGQPTPINQLANITVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++AS+E+ I +S+LG+NP  +G V+R+ +P+ TEERR  LVKV    AE+++
Sbjct: 66  VIQPWDKTIIASIEKAIMKSDLGINPSNDGNVIRLVIPQLTEERRKELVKVLRKRAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + LK   K    SED      +DIQK TD  IK IDS  + K+KEIM  
Sbjct: 126 VAVRNIRRDSNELLKSGEKEKLISEDDNKKGMDDIQKETDRHIKEIDSILQGKEKEIMEV 185


>gi|86146887|ref|ZP_01065206.1| ribosome recycling factor [Vibrio sp. MED222]
 gi|85835339|gb|EAQ53478.1| ribosome recycling factor [Vibrio sp. MED222]
          Length = 185

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + VE YG+  PL QVANV   + R L 
Sbjct: 7   KDAQERMVKSVDALKNSLQKIRTGRAHPSLLSGLTVEYYGAPTPLTQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK +   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKTLTPLVEKAIMTSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +KN+D     K+KE+M  
Sbjct: 127 AIRNIRRDANGDLKALLKDKEISEDEDRKAQDEIQKLTDAAVKNVDEVLAVKEKELMEV 185


>gi|256827506|ref|YP_003151465.1| ribosome recycling factor [Cryptobacterium curtum DSM 15641]
 gi|256583649|gb|ACU94783.1| ribosome recycling factor [Cryptobacterium curtum DSM 15641]
          Length = 186

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   ++RM   +  L +    +RTGR +  +LD ++V+ YG   P+NQ+A +   +  ML
Sbjct: 7   MLEAEERMEKAVDSLGEAFSNVRTGRANAMVLDRIRVDYYGVPTPINQMAAIKTPDAHML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  + ++E  ++ SNLGL P  +G ++R+  P  TEERR  LVK   AYAE+++
Sbjct: 67  VIEPWDKGTLGAIEHALNNSNLGLTPTNDGNLIRLSFPTLTEERRRELVKQCKAYAEEAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN RRD    ++K+ K+    ED     E DIQK+TDS I  ++  F++K+ E+M  
Sbjct: 127 IAVRNARRDANSAVEKAVKNDGLPEDEQRRSEADIQKLTDSYIAKVEESFKKKEAEVMEI 186


>gi|115352100|ref|YP_773939.1| ribosome recycling factor [Burkholderia ambifaria AMMD]
 gi|170699876|ref|ZP_02890906.1| ribosome recycling factor [Burkholderia ambifaria IOP40-10]
 gi|171318103|ref|ZP_02907272.1| ribosome recycling factor [Burkholderia ambifaria MEX-5]
 gi|172060964|ref|YP_001808616.1| ribosome recycling factor [Burkholderia ambifaria MC40-6]
 gi|122322843|sp|Q0BE18|RRF_BURCM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689163|sp|B1YS71|RRF_BURA4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|115282088|gb|ABI87605.1| ribosome recycling factor [Burkholderia ambifaria AMMD]
 gi|170135198|gb|EDT03496.1| ribosome recycling factor [Burkholderia ambifaria IOP40-10]
 gi|171096727|gb|EDT41612.1| ribosome recycling factor [Burkholderia ambifaria MEX-5]
 gi|171993481|gb|ACB64400.1| ribosome recycling factor [Burkholderia ambifaria MC40-6]
          Length = 186

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  +D   + K+ EIM  
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRASDDVQKLTDKHVAEVDKLVQSKEAEIMTV 186


>gi|209518711|ref|ZP_03267527.1| ribosome recycling factor [Burkholderia sp. H160]
 gi|209500825|gb|EEA00865.1| ribosome recycling factor [Burkholderia sp. H160]
          Length = 186

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  +I   K D+  +RTGR    +LD ++ + YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGAEQKMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV  VE+ I ES LGLNP   G V+R+P+P  TEERR  L KV  + AE +++
Sbjct: 68  VQPWEKKMVQVVEKAIRESELGLNPATHGDVIRVPMPALTEERRRELTKVVRSEAETARV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID     K+ EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVTTKEAEIMTV 186


>gi|330836659|ref|YP_004411300.1| ribosome recycling factor [Spirochaeta coccoides DSM 17374]
 gi|329748562|gb|AEC01918.1| ribosome recycling factor [Spirochaeta coccoides DSM 17374]
          Length = 188

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 81/180 (45%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M  +++ L      LRTGR + ++ D +KV+ YG   PLNQVA++++ E RM+
Sbjct: 9   LSQCEDKMNKSVNTLSASFQGLRTGRATAAIFDKIKVDYYGQETPLNQVASISIPEARMV 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  +E+ I +S LGLNP  +G++LRI  P  TE+RR  LVK + A AE+S+
Sbjct: 69  VIQPWDKGLLGPIEKAIQKSELGLNPNNDGKLLRINFPPLTEDRRKDLVKSSKATAEQSR 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD M+ LKK +KSG  SED     E+ IQK+TDS I  ++S   +K+KEIM  
Sbjct: 129 VAIRNIRRDAMEDLKKLQKSGAISEDEQKDGESRIQKLTDSFITKVNSLATDKEKEIMEI 188


>gi|254480101|ref|ZP_05093349.1| ribosome recycling factor [marine gamma proteobacterium HTCC2148]
 gi|214039663|gb|EEB80322.1| ribosome recycling factor [marine gamma proteobacterium HTCC2148]
          Length = 185

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +   +RM  ++  L  +   +RTGR  PS+LD ++VE YG+  PLNQ+ANV V + R L 
Sbjct: 7   KEADERMSKSLDALSHNFNKIRTGRAHPSLLDGLRVEYYGAETPLNQMANVNVEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WDK M+ ++E+ I +S+LGLNP   G+V+RIP+P  TEE R   ++ A   AE +++
Sbjct: 67  LTAWDKTMIPAIEKAIMKSDLGLNPATAGEVIRIPMPMLTEETRKGYIRQARHEAESARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN RRD    LK+  K  + SED      + IQK+TDS I  ++     K+ ++M  
Sbjct: 127 SVRNARRDANAMLKELEKDKEISEDDERRGHDGIQKVTDSYIAQVEKMLAAKEADLMEI 185


>gi|269138096|ref|YP_003294796.1| ribosome recycling factor [Edwardsiella tarda EIB202]
 gi|267983756|gb|ACY83585.1| ribosome recycling factor [Edwardsiella tarda EIB202]
 gi|304558140|gb|ADM40804.1| Ribosome recycling factor [Edwardsiella tarda FL6-60]
          Length = 185

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K ++  +RTGR  P++LD ++VE YG+  PL Q+AN+   + R L 
Sbjct: 7   KDAETRMDKCVESFKGNISKIRTGRAHPNLLDGIQVEYYGTATPLRQLANIVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+K+  + AE  ++
Sbjct: 67  LTVFDRSMSGAIEKAILTSDLGLNPASAGTVIRVPLPPLTEERRKDLIKLVRSEAESGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K  + SED     +++IQKITD  IK ID+   +K+KE+M F
Sbjct: 127 SVRNVRRDANDKVKALLKDKEISEDEDRKSQDEIQKITDLMIKKIDAALADKEKELMDF 185


>gi|238787232|ref|ZP_04631031.1| Ribosome-recycling factor [Yersinia frederiksenii ATCC 33641]
 gi|238724494|gb|EEQ16135.1| Ribosome-recycling factor [Yersinia frederiksenii ATCC 33641]
          Length = 185

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L 
Sbjct: 7   KDTEVRMEKCLEVFQSHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIIVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  LTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  + +K   K  + SED     +++IQK+TD+ IK +D+    K+ E+M F
Sbjct: 127 SIRNVRRDANEKVKALLKDKEISEDEDRRSQDEIQKLTDAFIKKVDAALAAKETELMDF 185


>gi|83721123|ref|YP_442554.1| ribosome recycling factor [Burkholderia thailandensis E264]
 gi|167581481|ref|ZP_02374355.1| ribosome recycling factor [Burkholderia thailandensis TXDOH]
 gi|167619591|ref|ZP_02388222.1| ribosome recycling factor [Burkholderia thailandensis Bt4]
 gi|257138763|ref|ZP_05587025.1| ribosome recycling factor [Burkholderia thailandensis E264]
 gi|123536967|sp|Q2SWZ5|RRF_BURTA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|83654948|gb|ABC39011.1| ribosome recycling factor [Burkholderia thailandensis E264]
          Length = 186

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPALTEERRRELTKVVKGEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQSKEAEIMTV 186


>gi|90022239|ref|YP_528066.1| ribosome recycling factor [Saccharophagus degradans 2-40]
 gi|89951839|gb|ABD81854.1| ribosome recycling factor [Saccharophagus degradans 2-40]
          Length = 187

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/187 (40%), Positives = 115/187 (61%), Gaps = 1/187 (0%)

Query: 1   MNQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  + D++ + ++RM   I  L      +RTGR  PS+LD V V  YGS  PL+QVANVT
Sbjct: 1   MTMIDDIKSDSEERMSRAIEALGTHFNKIRTGRAHPSILDGVMVSYYGSATPLSQVANVT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           VL+ R L +S W+K +V  +E+ I +S+LGLNP+  G ++R+P+P  TEE R   +K A 
Sbjct: 61  VLDARTLSISPWEKNIVPEIEKAIMKSDLGLNPVTTGDLIRVPMPMLTEETRKGYIKRAR 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A AE +++S+RN+RRD +  +K   K  + SED      ++IQ+IT+  +  +D     K
Sbjct: 121 AEAESARVSIRNVRRDALAEVKALVKDKEISEDDERRAADEIQQITNKYVAEVDKALSAK 180

Query: 180 KKEIMHF 186
           +K++M  
Sbjct: 181 EKDLMEI 187


>gi|241890096|ref|ZP_04777394.1| ribosome recycling factor [Gemella haemolysans ATCC 10379]
 gi|241863718|gb|EER68102.1| ribosome recycling factor [Gemella haemolysans ATCC 10379]
          Length = 185

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 123/186 (66%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M + I + N+ +RM   I+ L++++ ++R G+ S ++LD + V+ YG   P+NQVA V+V
Sbjct: 1   MPEQI-MNNLNERMEKAIASLRRELASIRAGKASAAVLDRLTVDYYGVPTPINQVAGVSV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP+MLV+S ++K ++  +E+ I  S+LGLNP  +G V+RI  P  TEERR  L K+   
Sbjct: 60  PEPKMLVISPYEKTLLGDIEKAIQASDLGLNPANDGTVIRIVFPALTEERRKELAKLVGK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E +K++VRN+RRD MD +KK  KS + +ED +    +DIQK+TD  +  ID   +EK+
Sbjct: 120 ESEGAKVAVRNVRRDAMDAMKKLEKSSQITEDDLKGYSDDIQKVTDKFVAEIDKVTKEKQ 179

Query: 181 KEIMHF 186
           +E+M  
Sbjct: 180 EELMSV 185


>gi|322831591|ref|YP_004211618.1| ribosome recycling factor [Rahnella sp. Y9602]
 gi|321166792|gb|ADW72491.1| ribosome recycling factor [Rahnella sp. Y9602]
          Length = 185

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SP +LD + VE YGS  PL Q+A VTV + R L 
Sbjct: 7   KDAEIRMEKCVESFKTHISKIRTGRASPGILDGIMVEYYGSATPLRQLAQVTVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+D+ + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  ISVFDRSISAAVEKAIMTSDLGLNPSSAGATIRVPLPALTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D  K   K  + SED     ++DIQK+TD  IK ID    EK+ E+M F
Sbjct: 127 SVRNVRRDANDKTKALLKDKEISEDEDRRSQDDIQKLTDIFIKKIDVALSEKEAELMEF 185


>gi|134296025|ref|YP_001119760.1| ribosome recycling factor [Burkholderia vietnamiensis G4]
 gi|166230770|sp|A4JF72|RRF_BURVG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|134139182|gb|ABO54925.1| ribosome recycling factor [Burkholderia vietnamiensis G4]
          Length = 186

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATSGDLIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  +D   + K+ EIM  
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRASDDVQKLTDKHVAEVDKLVQTKEAEIMTV 186


>gi|206560450|ref|YP_002231214.1| ribosome recycling factor [Burkholderia cenocepacia J2315]
 gi|238693109|sp|B4ECM8|RRF_BURCJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|198036491|emb|CAR52388.1| ribosome recycling factor [Burkholderia cenocepacia J2315]
          Length = 186

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  +D   + K+ EIM  
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRASDDVQKLTDKHVAEVDKLVQTKEAEIMTV 186


>gi|254360757|ref|ZP_04976905.1| peptide chain release factor RF4 [Mannheimia haemolytica PHL213]
 gi|261491693|ref|ZP_05988274.1| peptide chain release factor RF4 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261494456|ref|ZP_05990942.1| peptide chain release factor RF4 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|153091327|gb|EDN73301.1| peptide chain release factor RF4 [Mannheimia haemolytica PHL213]
 gi|261309840|gb|EEY11057.1| peptide chain release factor RF4 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261312646|gb|EEY13768.1| peptide chain release factor RF4 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 185

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL QVANV   + R L 
Sbjct: 7   KDTQDRMEKSLEALKGHIAKIRTGRAQPSLLDGIQVEYYGSATPLRQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+DK ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  A  E+ K+
Sbjct: 67  VNVFDKSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKAEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E DIQKITD+ IK +D     K+KE++ F
Sbjct: 127 AIRNVRRDANDQIKALLKDKEISENEQHKAEEDIQKITDTFIKKVDEVLAAKEKELLDF 185


>gi|288941761|ref|YP_003444001.1| ribosome recycling factor [Allochromatium vinosum DSM 180]
 gi|288897133|gb|ADC62969.1| ribosome recycling factor [Allochromatium vinosum DSM 180]
          Length = 185

 Score =  241 bits (617), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+  +RM  ++  L  ++  +RTGR  PS+LD + V  YG  VP+ QVAN+   + R L+
Sbjct: 7   QDAAERMAKSVESLTHELAKIRTGRAHPSLLDHIMVSYYGQDVPIRQVANINAEDARTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W++ MV ++E+ I +S+LGLNP   G  +R+P+P  TEERR  L+KVA   AE++++
Sbjct: 67  VTPWERNMVQAIEKAIMQSDLGLNPNTAGTAIRVPMPPLTEERRRDLIKVARNEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK+  K    SED     +  +QK+TD  +K +D+   EK++++M  
Sbjct: 127 AVRNIRRDANHDLKELVKDKMISEDDERRGQEIVQKLTDQYVKEVDAVLAEKEQDLMSI 185


>gi|90580974|ref|ZP_01236775.1| ribosome releasing factor [Vibrio angustum S14]
 gi|90437852|gb|EAS63042.1| ribosome releasing factor [Vibrio angustum S14]
          Length = 185

 Score =  241 bits (617), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  ++  L+  ++ +RTGR  PS+LD + VE YG++ PLNQVANV   + R L 
Sbjct: 7   QDAQTRMEKSVDALRNQLVKIRTGRAHPSLLDTIHVEYYGANTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+  A AE+ ++
Sbjct: 67  ITVFDRELAPKVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    +K   K  + SED     +++IQK+TD  IKNID+  E K+KE+M  
Sbjct: 127 AVRNIRRDANATVKGLLKDKEISEDDDRRAQDEIQKLTDDAIKNIDAVLEVKEKELMEV 185


>gi|13470840|ref|NP_102409.1| ribosome recycling factor [Mesorhizobium loti MAFF303099]
 gi|22001948|sp|Q98MB8|RRF_RHILO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|14021583|dbj|BAB48195.1| ribosome releasing factor [Mesorhizobium loti MAFF303099]
          Length = 184

 Score =  241 bits (617), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 94/179 (52%), Positives = 128/179 (71%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            ++K RM   I+  K D+ +LRTGR S ++LD ++V+AYG+ +P+NQVANVTV EPRM+ 
Sbjct: 6   DDLKRRMDGAIAAFKHDLASLRTGRASSNLLDAIQVQAYGTTMPINQVANVTVPEPRMIS 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VS+WDK MV +V+R I ESNLG NPIV+G  LRIP+PE  E+RR  LVK++H YAE +++
Sbjct: 66  VSIWDKSMVGAVDRAIRESNLGFNPIVDGTNLRIPLPELNEQRRKELVKISHGYAENARV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + R++RRDGMD LKK+ K G  SED      + +QK+TD TI  ID    +K+ EIM  
Sbjct: 126 AARHVRRDGMDFLKKAEKDGVISEDDQRKRSDQVQKLTDETISTIDHLLSDKEAEIMQV 184


>gi|118489544|gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score =  241 bits (617), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + K RM  TI  ++ +  ++RTGR +PSMLD ++VE YG+ V L  +A ++  +   L+
Sbjct: 108 DDAKGRMEKTIDTMRTNFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLL 167

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  + ++E+ I  S+LGL P  +G+V+R+ +P+ T ERR  L K+    AE+ K+
Sbjct: 168 VQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKV 227

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +   +K  K  K SED V  L +D+QK+TD  +K +D+ F++K+KE++  
Sbjct: 228 ALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286


>gi|152995304|ref|YP_001340139.1| ribosome recycling factor [Marinomonas sp. MWYL1]
 gi|189044060|sp|A6VUS5|RRF_MARMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|150836228|gb|ABR70204.1| ribosome recycling factor [Marinomonas sp. MWYL1]
          Length = 185

 Score =  241 bits (617), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 112/186 (60%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++  L++ +DRM   ++ ++     +RTGR  PS+LD VKV  YGS  PL+QVAN+TV
Sbjct: 2   INEI--LKDAEDRMSKAVASVESAFKKIRTGRAHPSILDSVKVNYYGSETPLSQVANITV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L VS W+  +V  +E+ I +S+LGLNP   G ++RIP+P  TEE R    K A  
Sbjct: 60  EDARTLGVSPWENNLVPEIEKAIMKSDLGLNPATNGNLIRIPMPALTEETRKNYFKQAKN 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  +I++RNIRRD    LK   K  + SED     ++ +QK+TD  +  I+     K+
Sbjct: 120 EAENGRIAIRNIRRDANGSLKDLVKEKEISEDDDRRGQDQVQKVTDKYVAQIEERLAAKE 179

Query: 181 KEIMHF 186
           K++M  
Sbjct: 180 KDLMEI 185


>gi|251793255|ref|YP_003007983.1| ribosome recycling factor [Aggregatibacter aphrophilus NJ8700]
 gi|247534650|gb|ACS97896.1| ribosome recycling factor [Aggregatibacter aphrophilus NJ8700]
          Length = 185

 Score =  241 bits (617), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  ++  LK  +  +RTGR  PS+LD ++V+ YGS  PL Q+ANV   + R L 
Sbjct: 7   QDAEERMEKSLEALKGHIAKIRTGRAQPSLLDAIQVDYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  A  E+ K+
Sbjct: 67  VTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKAEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E  IQK+TD  IK +D    +K+KE++ F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENDQHKAEEVIQKLTDGFIKEVDDVLADKEKELLDF 185


>gi|84389789|ref|ZP_00991341.1| ribosome releasing factor [Vibrio splendidus 12B01]
 gi|84376890|gb|EAP93764.1| ribosome releasing factor [Vibrio splendidus 12B01]
          Length = 185

 Score =  241 bits (617), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + VE YG+  PL QVANV   + R L 
Sbjct: 7   KDAQERMDKSVDALKNSLQKIRTGRAHPSLLSGLTVEYYGAPTPLAQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK +   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKTLTPLVEKAILTSDLGLNPMSAGTVIRVPLPALTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD  +KN+D     K+KE+M  
Sbjct: 127 AIRNIRRDANGDLKALLKDKEISEDEDRRAQDEIQKLTDIAVKNVDEVLATKEKELMEV 185


>gi|167837038|ref|ZP_02463921.1| ribosome recycling factor [Burkholderia thailandensis MSMB43]
          Length = 186

 Score =  241 bits (617), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKGEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K  EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQAKDAEIMTV 186


>gi|293390815|ref|ZP_06635149.1| ribosome recycling factor [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951349|gb|EFE01468.1| ribosome recycling factor [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 185

 Score =  241 bits (617), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ +DRM  ++  LK  +  +RTGR  PS+LD ++V+ YGS  PL Q+ANV   + R L 
Sbjct: 7   QDAEDRMEKSLEALKGHIAKIRTGRAQPSLLDAIQVDYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  A  E+ K+
Sbjct: 67  VTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRELIKIVKAEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E  IQK+TDS IK +D    +K+KE++ F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENDQHKAEEVIQKLTDSFIKKVDDVLADKEKELLDF 185


>gi|254179324|ref|ZP_04885923.1| ribosome recycling factor [Burkholderia pseudomallei 1655]
 gi|184209864|gb|EDU06907.1| ribosome recycling factor [Burkholderia pseudomallei 1655]
          Length = 186

 Score =  241 bits (617), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++ +M  +I   + D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KSVEQKMQRSIEAFRNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKTMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K  EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRASDDVQKLTDKHVAEIDKLVQAKDAEIMTV 186


>gi|59712566|ref|YP_205342.1| ribosome recycling factor [Vibrio fischeri ES114]
 gi|71649417|sp|Q5E3E2|RRF_VIBF1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|59480667|gb|AAW86454.1| ribosome recycling factor [Vibrio fischeri ES114]
          Length = 185

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK +++ +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNNLLKIRTGRAHPSLLSGISVEYYGAQTPLNQVANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELAGLVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAENGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K  + SED     +++IQK+TD+ +K+ID     K+KE+M  
Sbjct: 127 AIRNIRRDANGDVKALLKEKEISEDDDRRAQDEIQKLTDAAVKSIDEVLAVKEKELMEV 185


>gi|325519183|gb|EGC98648.1| ribosome recycling factor [Burkholderia sp. TJI49]
          Length = 186

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPALTEERRRELTKVVKGEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM  
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQTKEAEIMTV 186


>gi|268315588|ref|YP_003289307.1| ribosome recycling factor [Rhodothermus marinus DSM 4252]
 gi|262333122|gb|ACY46919.1| ribosome recycling factor [Rhodothermus marinus DSM 4252]
          Length = 192

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++ M  +++ L+ ++  LR GR +P+ML+ V+VE YG+  PL Q+A++T  +P +L
Sbjct: 13  LDDAREHMEKSLAHLRTELAALRAGRATPAMLEDVRVEYYGTMTPLMQLASITAPQPDLL 72

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  WD+  + ++ER I  +NLGLNP  +G ++RIP+P  +EERR  LV+ A   AE+++
Sbjct: 73  IVQPWDRSALGAIERAIINANLGLNPSNDGNIIRIPIPPLSEERRKELVRAARIRAEEAR 132

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR   DH+KK+++     ED+  + E ++QK+TD+ I+ ++   E K+ EIM  
Sbjct: 133 VAIRNIRRHAKDHIKKAKEEEHLPEDLCHAAEEELQKLTDTYIEKVNQLLERKEAEIMEV 192


>gi|39997016|ref|NP_952967.1| ribosome recycling factor [Geobacter sulfurreducens PCA]
 gi|47116992|sp|P61304|RRF_GEOSL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39983904|gb|AAR35294.1| ribosome recycling factor [Geobacter sulfurreducens PCA]
 gi|298506033|gb|ADI84756.1| ribosome recycling factor [Geobacter sulfurreducens KN400]
          Length = 185

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + ++K  M  ++  L+++   +RTGR +  +LD ++V+ YG+  PLNQVA + V EPR +
Sbjct: 6   INDMKSHMEKSVESLRREYQKVRTGRANTGLLDEIRVDFYGNPSPLNQVATLAVPEPRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+ +M+  +E+ I  +NLG  P  +G+++RI +P  TEERR  +VK     AE +K
Sbjct: 66  TIQPWETKMIPVIEKAILNANLGFTPSNDGKLIRISLPPLTEERRKEIVKSLKKTAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD +D LKK  K  K SED +   E ++Q +T+  +  +D     K+KE+M  
Sbjct: 126 IAIRNIRRDAIDGLKKLEKDKKISEDDLKRAEKEVQDVTNVYVAKVDEVLAHKEKEVMEV 185


>gi|53719765|ref|YP_108751.1| ribosome recycling factor [Burkholderia pseudomallei K96243]
 gi|53723736|ref|YP_103192.1| ribosome recycling factor [Burkholderia mallei ATCC 23344]
 gi|67641707|ref|ZP_00440476.1| ribosome recycling factor [Burkholderia mallei GB8 horse 4]
 gi|76809671|ref|YP_333972.1| ribosome recycling factor [Burkholderia pseudomallei 1710b]
 gi|121598549|ref|YP_993369.1| ribosome recycling factor [Burkholderia mallei SAVP1]
 gi|124384027|ref|YP_001029194.1| ribosome recycling factor [Burkholderia mallei NCTC 10229]
 gi|126439886|ref|YP_001059466.1| ribosome recycling factor [Burkholderia pseudomallei 668]
 gi|126449064|ref|YP_001080876.1| ribosome recycling factor [Burkholderia mallei NCTC 10247]
 gi|126454912|ref|YP_001066749.1| ribosome recycling factor [Burkholderia pseudomallei 1106a]
 gi|134277912|ref|ZP_01764627.1| ribosome recycling factor [Burkholderia pseudomallei 305]
 gi|167000553|ref|ZP_02266364.1| ribosome recycling factor [Burkholderia mallei PRL-20]
 gi|167720163|ref|ZP_02403399.1| ribosome recycling factor [Burkholderia pseudomallei DM98]
 gi|167739168|ref|ZP_02411942.1| ribosome recycling factor [Burkholderia pseudomallei 14]
 gi|167816379|ref|ZP_02448059.1| ribosome recycling factor [Burkholderia pseudomallei 91]
 gi|167824757|ref|ZP_02456228.1| ribosome recycling factor [Burkholderia pseudomallei 9]
 gi|167846289|ref|ZP_02471797.1| ribosome recycling factor [Burkholderia pseudomallei B7210]
 gi|167894871|ref|ZP_02482273.1| ribosome recycling factor [Burkholderia pseudomallei 7894]
 gi|167903260|ref|ZP_02490465.1| ribosome recycling factor [Burkholderia pseudomallei NCTC 13177]
 gi|167911501|ref|ZP_02498592.1| ribosome recycling factor [Burkholderia pseudomallei 112]
 gi|167919510|ref|ZP_02506601.1| ribosome recycling factor [Burkholderia pseudomallei BCC215]
 gi|217421741|ref|ZP_03453245.1| ribosome recycling factor [Burkholderia pseudomallei 576]
 gi|226200090|ref|ZP_03795636.1| ribosome recycling factor [Burkholderia pseudomallei Pakistan 9]
 gi|237812805|ref|YP_002897256.1| ribosome recycling factor [Burkholderia pseudomallei MSHR346]
 gi|242317615|ref|ZP_04816631.1| ribosome recycling factor [Burkholderia pseudomallei 1106b]
 gi|254177852|ref|ZP_04884507.1| ribosome recycling factor [Burkholderia mallei ATCC 10399]
 gi|254189290|ref|ZP_04895801.1| ribosome recycling factor [Burkholderia pseudomallei Pasteur 52237]
 gi|254197752|ref|ZP_04904174.1| ribosome recycling factor [Burkholderia pseudomallei S13]
 gi|254200144|ref|ZP_04906510.1| ribosome recycling factor [Burkholderia mallei FMH]
 gi|254206482|ref|ZP_04912834.1| ribosome recycling factor [Burkholderia mallei JHU]
 gi|254258794|ref|ZP_04949848.1| ribosome recycling factor [Burkholderia pseudomallei 1710a]
 gi|254297208|ref|ZP_04964661.1| ribosome recycling factor [Burkholderia pseudomallei 406e]
 gi|254358109|ref|ZP_04974382.1| ribosome recycling factor [Burkholderia mallei 2002721280]
 gi|60390239|sp|Q62JC7|RRF_BURMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390241|sp|Q63T15|RRF_BURPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123598729|sp|Q3JR31|RRF_BURP1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230765|sp|A3MKU0|RRF_BURM7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230766|sp|A2SB75|RRF_BURM9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230767|sp|A1V566|RRF_BURMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230768|sp|A3NWM8|RRF_BURP0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230769|sp|A3NAU5|RRF_BURP6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|52210179|emb|CAH36158.1| ribosome recycling factor [Burkholderia pseudomallei K96243]
 gi|52427159|gb|AAU47752.1| ribosome recycling factor [Burkholderia mallei ATCC 23344]
 gi|76579124|gb|ABA48599.1| ribosome recycling factor [Burkholderia pseudomallei 1710b]
 gi|121227359|gb|ABM49877.1| ribosome recycling factor [Burkholderia mallei SAVP1]
 gi|124292047|gb|ABN01316.1| ribosome recycling factor [Burkholderia mallei NCTC 10229]
 gi|126219379|gb|ABN82885.1| ribosome recycling factor [Burkholderia pseudomallei 668]
 gi|126228554|gb|ABN92094.1| ribosome recycling factor [Burkholderia pseudomallei 1106a]
 gi|126241934|gb|ABO05027.1| ribosome recycling factor [Burkholderia mallei NCTC 10247]
 gi|134251562|gb|EBA51641.1| ribosome recycling factor [Burkholderia pseudomallei 305]
 gi|147749740|gb|EDK56814.1| ribosome recycling factor [Burkholderia mallei FMH]
 gi|147753925|gb|EDK60990.1| ribosome recycling factor [Burkholderia mallei JHU]
 gi|148027236|gb|EDK85257.1| ribosome recycling factor [Burkholderia mallei 2002721280]
 gi|157806852|gb|EDO84022.1| ribosome recycling factor [Burkholderia pseudomallei 406e]
 gi|157936969|gb|EDO92639.1| ribosome recycling factor [Burkholderia pseudomallei Pasteur 52237]
 gi|160698891|gb|EDP88861.1| ribosome recycling factor [Burkholderia mallei ATCC 10399]
 gi|169654493|gb|EDS87186.1| ribosome recycling factor [Burkholderia pseudomallei S13]
 gi|217395483|gb|EEC35501.1| ribosome recycling factor [Burkholderia pseudomallei 576]
 gi|225927774|gb|EEH23815.1| ribosome recycling factor [Burkholderia pseudomallei Pakistan 9]
 gi|237503136|gb|ACQ95454.1| ribosome recycling factor [Burkholderia pseudomallei MSHR346]
 gi|238522669|gb|EEP86112.1| ribosome recycling factor [Burkholderia mallei GB8 horse 4]
 gi|242140854|gb|EES27256.1| ribosome recycling factor [Burkholderia pseudomallei 1106b]
 gi|243063483|gb|EES45669.1| ribosome recycling factor [Burkholderia mallei PRL-20]
 gi|254217483|gb|EET06867.1| ribosome recycling factor [Burkholderia pseudomallei 1710a]
          Length = 186

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KSVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKTMVAKVEKAIREADLGLNPATSGDLIRVPMPPLTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K  EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRASDDVQKLTDKHVAEIDKLVQAKDAEIMTV 186


>gi|229544425|ref|ZP_04433483.1| ribosome recycling factor [Bacillus coagulans 36D1]
 gi|229324910|gb|EEN90587.1| ribosome recycling factor [Bacillus coagulans 36D1]
          Length = 186

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/185 (40%), Positives = 122/185 (65%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQVID    KD+M   I   ++++ ++R GR + ++LD + ++ YG+  P+NQ+A+++V 
Sbjct: 4   NQVID--TAKDKMAKAIQAFQRELGSIRAGRANAALLDKITIDYYGARTPVNQLASISVP 61

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R++V+  +DK ++  +ER I +S+LGL P  +G V+R+ +P  TEERR  LVK+    
Sbjct: 62  EARLMVIQPYDKTVLGEIERAILKSDLGLTPNNDGSVIRLSIPPLTEERRKELVKLIKKE 121

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE++K+++RN+RRD  D LKK  K+G+ +ED       D+QKITD  I+ ID   + K++
Sbjct: 122 AEEAKVAIRNVRRDANDELKKQEKNGEITEDEHRGFAEDVQKITDQHIQKIDKMTKTKEQ 181

Query: 182 EIMHF 186
           EIM  
Sbjct: 182 EIMEV 186


>gi|190360297|sp|Q0BTL9|RRF_GRABC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 188

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q++  RM   +  L+++   LR GR SP++L+ V+V+AYGS VPL QV N+ V E RML 
Sbjct: 10  QDLTRRMDGALETLRREFAGLRAGRASPALLEPVRVDAYGSEVPLTQVGNIGVPESRMLT 69

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWD+ +V++VE+ I +  LGLNP  EGQ++R+P+P  TEERR  L K A  YAE +++
Sbjct: 70  VQVWDRSLVSAVEKAIRDCGLGLNPQTEGQLIRVPLPMLTEERRNELAKAAGRYAESTRV 129

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++R +RRDGMD +K   K  +  ED   +  +++QK+TD  IK +D    EK+K+I   
Sbjct: 130 AIRAVRRDGMDQIKGHEKKSEIGEDEAKTWSDEVQKLTDHYIKRVDDALVEKEKDIRQV 188


>gi|89075417|ref|ZP_01161834.1| ribosome releasing factor [Photobacterium sp. SKA34]
 gi|89048833|gb|EAR54403.1| ribosome releasing factor [Photobacterium sp. SKA34]
          Length = 185

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  ++  L+  ++ +RTGR  PS+LD + VE YG++ PLNQVANV   + R L 
Sbjct: 7   QDAQTRMEKSVDALRNQLVKIRTGRAHPSLLDTIHVEYYGANTPLNQVANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+  A AE+ ++
Sbjct: 67  ITVFDRELAPKVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    +K   K  + SED     +++IQK+TD  IKNID+  E K+KE+M  
Sbjct: 127 AVRNIRRDANATVKGLLKDKEISEDDDRRAQDEIQKLTDDAIKNIDAVLEVKEKELMEV 185


>gi|109897577|ref|YP_660832.1| ribosome recycling factor [Pseudoalteromonas atlantica T6c]
 gi|123361091|sp|Q15WG0|RRF_PSEA6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|109699858|gb|ABG39778.1| ribosome recycling factor [Pseudoalteromonas atlantica T6c]
          Length = 185

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 111/186 (59%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I++ + + RM  ++  L+     +RTGR  PS+LD + V  YG+  PL Q+ANV  
Sbjct: 1   MIDEINV-DARQRMEKSVLALRGQFTKIRTGRAHPSLLDSIMVPYYGAPTPLKQLANVIA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L ++V+DK    +VE+ I +S+LGLNP+  G V+RIP+P  TEERR  L++V   
Sbjct: 60  EDSRTLALTVFDKSAAQAVEKAIMQSDLGLNPMSAGTVIRIPMPALTEERRKDLIRVVRN 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  +++VRNIRRD    +K+  K  + SED     E+ IQK+TD  +K ID     K+
Sbjct: 120 EAEGGRVAVRNIRRDANGDIKELLKEKEISEDDAHRGEDAIQKLTDEFVKQIDDILAAKE 179

Query: 181 KEIMHF 186
            E+M  
Sbjct: 180 TELMEV 185


>gi|77360957|ref|YP_340532.1| ribosome releasing factor [Pseudoalteromonas haloplanktis TAC125]
 gi|76875868|emb|CAI87089.1| ribosome releasing factor [Pseudoalteromonas haloplanktis TAC125]
          Length = 173

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 73/173 (42%), Positives = 103/173 (59%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +++ L   +  +RTGR  P++LD + V  YGS  PLNQVANVT+ + R L + V+DK
Sbjct: 1   MQKSVAALGSQLSKIRTGRAHPALLDGIMVSYYGSPTPLNQVANVTIEDSRTLAIGVFDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+K+     E  +++VRNIR
Sbjct: 61  SLAQAVEKAIMASDLGLNPMSAGSVIRVPLPALTEERRKNLIKIVRGEVEGGRVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD     K   K    SED     E  IQK+TD  IK +D+    K+ E+M  
Sbjct: 121 RDANGDFKNLLKDKDISEDEARQAEEAIQKMTDKFIKEMDTQLAAKEAELMEI 173


>gi|56964004|ref|YP_175735.1| ribosome recycling factor [Bacillus clausii KSM-K16]
 gi|60390232|sp|Q5WFT1|RRF_BACSK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56910247|dbj|BAD64774.1| ribosome recycling factor [Bacillus clausii KSM-K16]
          Length = 185

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 84/179 (46%), Positives = 124/179 (69%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + K RM   I  L +++  LR GR +P++LD V VE YG+  PLNQ+A+VTV E R+L+
Sbjct: 7   ADAKTRMDKAIDVLSRELAKLRAGRANPALLDRVTVEYYGAQTPLNQLASVTVPEARLLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ +DK  VAS+E+ I +S+LGL P  +GQV+RI +P  TEERR  LV++    AE+SK+
Sbjct: 67  ITPYDKTAVASIEKAILKSDLGLTPSNDGQVIRIAIPPLTEERRKDLVRLVSKTAEESKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  D LKK +K G+ +ED + S  +DIQK+TD+ +  ID   ++K++EI+  
Sbjct: 127 AVRNIRRDANDELKKLQKDGEMTEDELRSATDDIQKLTDTYVAKIDEKAKQKEQEIIEV 185


>gi|91788554|ref|YP_549506.1| ribosome recycling factor [Polaromonas sp. JS666]
 gi|123059788|sp|Q12A34|RRF_POLSJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91697779|gb|ABE44608.1| ribosome recycling factor [Polaromonas sp. JS666]
          Length = 186

 Score =  241 bits (617), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           QN + +M  ++   K  +  +RTGR +P +LD V V+ YGS VP++QVANV++L+ R + 
Sbjct: 8   QNAEQKMQQSVDSFKNSLTKIRTGRANPGLLDTVHVDYYGSMVPISQVANVSLLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VS W+K M A +E+ I +S+LGLNP  +G ++R+P+P  TEERR  L KV  A  E +K+
Sbjct: 68  VSPWEKGMGAKIEKAIRDSDLGLNPAAQGDLIRVPMPAMTEERRKELTKVVRAEGEHAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + +KK  K    SED     +++IQK TD  I  +D     K+++IM  
Sbjct: 128 AVRNLRRDANEGVKKLLKEKLVSEDDERRAQDEIQKFTDRFIAEVDKLVAGKEQDIMAV 186


>gi|332307502|ref|YP_004435353.1| ribosome recycling factor [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174831|gb|AEE24085.1| ribosome recycling factor [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 185

 Score =  241 bits (616), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 111/186 (59%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I++ + + RM  ++  L+     +RTGR  PS+LD + V  YG+  PL Q+ANV  
Sbjct: 1   MIDEINV-DARQRMEKSVVALRGQFTKIRTGRAHPSLLDSIMVPYYGAPTPLKQLANVIA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L ++V+DK    +VE+ I +S+LGLNP+  G V+RIP+P  TEERR  L++V   
Sbjct: 60  EDSRTLALTVFDKSAAQAVEKAIMQSDLGLNPMSAGTVIRIPMPALTEERRKDLIRVVRN 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  +++VRNIRRD    +K+  K  + SED     E+ IQK+TD  +K ID     K+
Sbjct: 120 EAEGGRVAVRNIRRDANGDIKELLKEKEISEDDAHRGEDAIQKLTDEFVKQIDEILAAKE 179

Query: 181 KEIMHF 186
            E+M  
Sbjct: 180 TELMEV 185


>gi|107028804|ref|YP_625899.1| ribosome recycling factor [Burkholderia cenocepacia AU 1054]
 gi|116690037|ref|YP_835660.1| ribosome recycling factor [Burkholderia cenocepacia HI2424]
 gi|170733372|ref|YP_001765319.1| ribosome recycling factor [Burkholderia cenocepacia MC0-3]
 gi|254247886|ref|ZP_04941207.1| Ribosome recycling factor [Burkholderia cenocepacia PC184]
 gi|123070966|sp|Q1BHH9|RRF_BURCA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230415|sp|A0K8E0|RRF_BURCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238688551|sp|B1JUE7|RRF_BURCC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|105897968|gb|ABF80926.1| ribosome recycling factor [Burkholderia cenocepacia AU 1054]
 gi|116648126|gb|ABK08767.1| ribosome recycling factor [Burkholderia cenocepacia HI2424]
 gi|124872662|gb|EAY64378.1| Ribosome recycling factor [Burkholderia cenocepacia PC184]
 gi|169816614|gb|ACA91197.1| ribosome recycling factor [Burkholderia cenocepacia MC0-3]
          Length = 186

 Score =  241 bits (616), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATTGDLIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM  
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRASDDVQKLTDKHVAEIDKLVQTKEAEIMTV 186


>gi|4768863|gb|AAD29657.1|AF124757_17 ribosome recycling factor [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 185

 Score =  241 bits (616), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 87/180 (48%), Positives = 125/180 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            +  +++ R+   +  LK D   LRTGR S S+LD V V+ YG+++PLNQVA V+V EPR
Sbjct: 4   YNKADLERRIKGAVESLKSDFSGLRTGRASTSLLDPVTVDVYGANMPLNQVATVSVPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V VWDK  V  V++ I  + LGLNP+V+GQ+LR+P+P+ TEERR  L K+   Y+EK
Sbjct: 64  MITVQVWDKSNVTPVDKAIRSAGLGLNPVVDGQMLRLPIPDLTEERRKELAKLVGQYSEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++I+VRN+RRDG D +K+  K  + SED     EN++QK+TD TI +ID+    K+KEI+
Sbjct: 124 ARIAVRNVRRDGNDQIKQDEKKNEISEDEKKRFENEVQKLTDKTIADIDALAVHKEKEIL 183


>gi|28899089|ref|NP_798694.1| ribosome recycling factor [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839719|ref|ZP_01992386.1| ribosome recycling factor [Vibrio parahaemolyticus AQ3810]
 gi|260876829|ref|ZP_05889184.1| ribosome recycling factor [Vibrio parahaemolyticus AN-5034]
 gi|31076875|sp|Q8GRF5|RRF_VIBPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33357058|pdb|1IS1|A Chain A, Crystal Structure Of Ribosome Recycling Factor From Vibrio
           Parahaemolyticus
 gi|23491649|dbj|BAC16794.1| ribosome recycling factor [Vibrio parahaemolyticus]
 gi|28807313|dbj|BAC60578.1| ribosome recycling factor [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746755|gb|EDM57743.1| ribosome recycling factor [Vibrio parahaemolyticus AQ3810]
 gi|308091503|gb|EFO41198.1| ribosome recycling factor [Vibrio parahaemolyticus AN-5034]
 gi|328474374|gb|EGF45179.1| ribosome recycling factor [Vibrio parahaemolyticus 10329]
          Length = 185

 Score =  241 bits (616), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAATPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K  + SED     + +IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKELMEV 185


>gi|146297354|ref|YP_001181125.1| ribosome recycling factor [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|226703256|sp|A4XLZ9|RRF_CALS8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145410930|gb|ABP67934.1| ribosome recycling factor [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 184

 Score =  241 bits (616), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M   I  LK++  T+R GR +P +LD V V+ YG   P+ Q+A++TV E RM+
Sbjct: 5   IQIAEEKMKKAIETLKEEFATVRAGRANPHILDKVMVDYYGVPTPIPQLASITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W+  M+  +E+ I +++LG+NP  +G+V+R+  PE TEERR  LVK     AE +K
Sbjct: 65  VIQPWEARMLKEIEKAIQKADLGVNPANDGKVIRLIFPELTEERRKELVKQVKKMAEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+ +D  KK +K+ + +ED +   E D+QK+ D  I+ I+     K+KEIM  
Sbjct: 125 VAIRNIRREAIDEYKKMKKNNEITEDDLKDAEEDVQKLHDKYIEQIEKLLSAKEKEIMEV 184


>gi|218295073|ref|ZP_03495909.1| ribosome recycling factor [Thermus aquaticus Y51MC23]
 gi|218244276|gb|EED10801.1| ribosome recycling factor [Thermus aquaticus Y51MC23]
          Length = 185

 Score =  241 bits (616), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 77/178 (43%), Positives = 113/178 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              +  M  ++  L+ ++  LRTGR +P++L  +KVE YG+ VPL+Q+A V+  + R LV
Sbjct: 8   AETRSHMQKSLEALEHNLSGLRTGRANPALLLHLKVEYYGTPVPLSQIATVSAPDARTLV 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WD+  + ++E+ I +S+LGLNP  +G  L I +P  TEERR  LVK A  YAE+ +I
Sbjct: 68  VQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKELVKAARHYAEEGRI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RNIRR+ ++ LKK  K    SED     E +IQKITD  I  +D   E+K+ EI+H
Sbjct: 128 AIRNIRREALEKLKKLAKELHLSEDDTKRAEAEIQKITDEFIAKVDELLEKKEAEILH 185


>gi|291614111|ref|YP_003524268.1| ribosome recycling factor [Sideroxydans lithotrophicus ES-1]
 gi|291584223|gb|ADE11881.1| ribosome recycling factor [Sideroxydans lithotrophicus ES-1]
          Length = 185

 Score =  241 bits (616), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++ +M  ++  LK D+  +RTGR    +LD V V+ YGS   +NQVAN+T+ + R + 
Sbjct: 7   KNVEQKMAKSLEALKTDLGKIRTGRAHTGLLDHVMVDYYGSPTAVNQVANITLTDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K MV  +E+ I +S+LGLNP   G ++R+P+P  TEERR  L+KV  +  E +K+
Sbjct: 67  VQPYEKNMVGPIEKAIRDSDLGLNPATNGDLIRVPMPMLTEERRRDLIKVVKSEGEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LKK  K     ED     + D+QK+TD  +  ID   + K+ ++M  
Sbjct: 127 AVRNIRRDANEQLKKLLKDKAVGEDEERRAQEDVQKLTDRFVAEIDKALQAKETDLMAV 185


>gi|317132574|ref|YP_004091888.1| ribosome recycling factor [Ethanoligenens harbinense YUAN-3]
 gi|315470553|gb|ADU27157.1| ribosome recycling factor [Ethanoligenens harbinense YUAN-3]
          Length = 183

 Score =  241 bits (616), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + +M  T++ L+ +  T+R GR +P++LD V+V+ YG+  P+NQ+A V+V E R L 
Sbjct: 5   QDYQVKMTKTVAALESEYGTIRAGRANPAILDKVRVDYYGTPTPINQIAAVSVTEARNLT 64

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD   + ++E+ I+ S+LG+NP  +G+++RI  P  TEERR  LVK    Y E +K+
Sbjct: 65  IQPWDITQLRAIEKAIYASDLGVNPQNDGKIIRIAFPPLTEERRKELVKTVRKYGEDAKV 124

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++R+IRRD ++ LK+ +K G+ +ED +   E  +Q  TD   K ID    +K+KEIM  
Sbjct: 125 AIRSIRRDAIESLKEQKKGGELTEDDLKDAEKKVQDATDRFCKEIDGIAAKKEKEIMEI 183


>gi|24373200|ref|NP_717243.1| ribosome recycling factor [Shewanella oneidensis MR-1]
 gi|34924965|sp|Q8EGH2|RRF_SHEON RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|24347421|gb|AAN54687.1|AE015609_6 ribosome recycling factor [Shewanella oneidensis MR-1]
          Length = 185

 Score =  241 bits (616), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV V + R L 
Sbjct: 7   KDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV  A AE  ++
Sbjct: 67  VTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +  +KK  K+ + +ED V   E+++QK TD+ IK +D     K+ E+M  
Sbjct: 127 AIRNVRRDAISDVKKLEKAKECTEDDVRRFEDEVQKFTDAHIKKVDEILAAKEIELMEV 185


>gi|282850149|ref|ZP_06259528.1| ribosome recycling factor [Veillonella parvula ATCC 17745]
 gi|294791801|ref|ZP_06756949.1| ribosome recycling factor [Veillonella sp. 6_1_27]
 gi|282579642|gb|EFB85046.1| ribosome recycling factor [Veillonella parvula ATCC 17745]
 gi|294457031|gb|EFG25393.1| ribosome recycling factor [Veillonella sp. 6_1_27]
          Length = 186

 Score =  241 bits (616), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 82/180 (45%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  +DRM  +I  LK +  ++RTGR S ++LD V V+ YGS  P+NQVAN++V EPRM+
Sbjct: 7   LQQAEDRMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK M+ ++E+ I +S+LGLNP  +G  +R+ +P+ TEERR  +VKV H  AE +K
Sbjct: 67  VIAPWDKTMIGAIEKAILQSDLGLNPGNDGAQIRLSIPQLTEERRKEIVKVVHKKAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + LKK  K+   +ED      + IQK+TD+ +K ID     K+K+++  
Sbjct: 127 VAVRNIRRDVNEALKKEEKAKTITEDDAKDGLDQIQKLTDAKVKQIDELKAVKEKDVLEV 186


>gi|83589883|ref|YP_429892.1| ribosome recycling factor [Moorella thermoacetica ATCC 39073]
 gi|123524654|sp|Q2RJP0|RRF_MOOTA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|83572797|gb|ABC19349.1| ribosome recycling factor [Moorella thermoacetica ATCC 39073]
          Length = 185

 Score =  241 bits (616), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  +++M   +  L++++ +LR GR +P++L+ V V  YG+  P+NQ+A V+  E R+L
Sbjct: 6   LQEAEEKMKKAVEGLRRELASLRAGRANPALLEKVLVSYYGTPTPVNQLATVSSPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD+ ++  +E+ I +S+LGL P  +G V+RI +P+ TEERR  LVKVA   AE+ +
Sbjct: 66  VIQPWDRNILPEIEKAILKSDLGLTPSSDGTVIRITIPQLTEERRSELVKVARKKAEEFR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN RR+  D LK S K+ +ASED V   +  +QK TD+ I+ ID     K+ EIM  
Sbjct: 126 VMVRNARREANDKLKASEKNKEASEDEVKRAQEKVQKTTDNYIQIIDKILATKEAEIMEV 185


>gi|254252062|ref|ZP_04945380.1| Ribosome recycling factor [Burkholderia dolosa AUO158]
 gi|124894671|gb|EAY68551.1| Ribosome recycling factor [Burkholderia dolosa AUO158]
          Length = 186

 Score =  241 bits (616), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G V+R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATTGDVIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM  
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQTKEAEIMTV 186


>gi|238918776|ref|YP_002932290.1| ribosome recycling factor, [Edwardsiella ictaluri 93-146]
 gi|259494541|sp|C5BHB9|RRF_EDWI9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238868344|gb|ACR68055.1| ribosome recycling factor, putative [Edwardsiella ictaluri 93-146]
          Length = 185

 Score =  241 bits (616), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K ++  +RTGR  P++LD ++VE YG+  PL Q+AN+   + R L 
Sbjct: 7   KDAETRMDKCVESFKGNISKIRTGRAHPNLLDGIQVEYYGTATPLRQLANIVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ M  ++E+ I  S+LGLNP   G V+R+P+P  TEERR  L+K+  + AE  ++
Sbjct: 67  LTVFDRSMSGAIEKAILTSDLGLNPASAGTVIRVPLPPLTEERRKDLIKLVRSEAESGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K  + SED     + +IQKITD  IK ID+   +K+KE+M F
Sbjct: 127 SVRNVRRDANDKVKALLKDKEISEDEDRKSQEEIQKITDLMIKKIDAALADKEKELMDF 185


>gi|258541747|ref|YP_003187180.1| ribosome recycling factor [Acetobacter pasteurianus IFO 3283-01]
 gi|329114467|ref|ZP_08243229.1| Ribosome-recycling factor [Acetobacter pomorum DM001]
 gi|256632825|dbj|BAH98800.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-01]
 gi|256635882|dbj|BAI01851.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-03]
 gi|256638937|dbj|BAI04899.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-07]
 gi|256641991|dbj|BAI07946.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645046|dbj|BAI10994.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648101|dbj|BAI14042.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651154|dbj|BAI17088.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654145|dbj|BAI20072.1| ribosome Recycling Factor (RRF) [Acetobacter pasteurianus IFO
           3283-12]
 gi|326696543|gb|EGE48222.1| Ribosome-recycling factor [Acetobacter pomorum DM001]
          Length = 187

 Score =  241 bits (616), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 86/180 (47%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++K RM   +  L++D   LR+GR SP++L+ V+VEAYG  VPL QV ++ V E RM+
Sbjct: 8   LDDLKRRMDGALDSLRRDFSGLRSGRASPALLEPVRVEAYGGEVPLTQVGSIAVPEARMI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWD+ +  +VER I +S LGLNP  EGQ +R+P+P+ TEERR  L K A  YAE  K
Sbjct: 68  TVQVWDRALAGAVERAIRDSGLGLNPAGEGQTIRVPIPQLTEERRNELAKAAARYAEGGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR +RRDGMD  K   K G+ S+D V +  + IQK+TD  +K ID    +K KEI   
Sbjct: 128 VAVRGVRRDGMDKAKGFEKKGEISQDDVKTWSDAIQKLTDQYVKKIDDMLADKDKEIKQV 187


>gi|46202355|ref|ZP_00053346.2| COG0233: Ribosome recycling factor [Magnetospirillum
           magnetotacticum MS-1]
          Length = 173

 Score =  241 bits (616), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 90/173 (52%), Positives = 114/173 (65%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +  LKK+   LR+GR S ++LD V VEAYG  +PL+Q   V V EPRML V VWDK
Sbjct: 1   MDSAVEVLKKEFSGLRSGRASVNLLDPVVVEAYGQTMPLSQCGTVGVPEPRMLTVQVWDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             V +VE+ I  + LGLNP  +GQ++R+P+P   EERR  L KVA  YAE+++ISVRN+R
Sbjct: 61  SQVKAVEKAIANAGLGLNPQADGQMIRVPIPALNEERRKELQKVAGKYAEQARISVRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RDGMD LKK  K G  SED +   E ++Q +TD TIK ID     K+KEIM  
Sbjct: 121 RDGMDSLKKMEKDGHISEDEIKKHEKEVQTVTDDTIKKIDEVLGHKEKEIMQV 173


>gi|237745598|ref|ZP_04576078.1| ribosome recycling factor [Oxalobacter formigenes HOxBLS]
 gi|229376949|gb|EEO27040.1| ribosome recycling factor [Oxalobacter formigenes HOxBLS]
          Length = 186

 Score =  241 bits (615), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  ++  LK D+  +RTGR    +LD ++V+ YGS   ++QVANVT+L+ R + 
Sbjct: 8   KNAEQKMNKSVDSLKADLAKVRTGRAHTGILDHIQVDYYGSPTQISQVANVTLLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV+ +E+ I +S+LGLNP   G ++R+P P  TEERR  +VK+     E +K+
Sbjct: 68  VQPWEKKMVSVIEKAIRDSDLGLNPSSVGDIIRVPTPPLTEERRKEMVKLVKTEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LKK  K    SED     ++DIQK+TD  ++ ID    EK+KE+M  
Sbjct: 128 AVRNIRRDANEALKKMVKDKACSEDEERRAQDDIQKLTDRFVQQIDKLLTEKEKEVMTV 186


>gi|78066795|ref|YP_369564.1| ribosome recycling factor [Burkholderia sp. 383]
 gi|123568180|sp|Q39F46|RRF_BURS3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|77967540|gb|ABB08920.1| ribosome recycling factor [Burkholderia sp. 383]
          Length = 186

 Score =  241 bits (615), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    MLD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIDAFKSDLAKIRTGRAHTGMLDHVQVDYYGSMVPISQVANMTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G  +R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKPMVAKVEKAIREADLGLNPATSGDQIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM  
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRASDDVQKLTDKHVAEIDKLVQSKEAEIMTV 186


>gi|269837765|ref|YP_003319993.1| ribosome recycling factor [Sphaerobacter thermophilus DSM 20745]
 gi|269787028|gb|ACZ39171.1| ribosome recycling factor [Sphaerobacter thermophilus DSM 20745]
          Length = 185

 Score =  241 bits (615), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + RM  T+  L++++  +RTGR SP +++ ++V+ YG+  PLNQVA ++  EPR+L
Sbjct: 6   LADAEGRMTKTLDNLQRELAGIRTGRASPGLIERLEVDYYGTPTPLNQVAGISAPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD+  ++++E+ I  S+LGLNP  +GQV+RI +P  TEERR ALV+V     E+S+
Sbjct: 66  VVQPWDRSAMSAIEKAIRSSDLGLNPTNDGQVIRIAIPPLTEERRKALVRVVRQKVEESR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +  +K+  +     ED     E  +Q++T+  I   D   + K+ E++  
Sbjct: 126 VAIRNIRRDALAQVKEMLQEKLIGEDDERRAEQQVQELTNRYINEADKIGKNKEAEVLEV 185


>gi|85059918|ref|YP_455620.1| ribosome recycling factor [Sodalis glossinidius str. 'morsitans']
 gi|123518938|sp|Q2NRL0|RRF_SODGM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|84780438|dbj|BAE75215.1| ribosome recycling factor [Sodalis glossinidius str. 'morsitans']
          Length = 185

 Score =  241 bits (615), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD ++++ YG   PL Q+AN+   + R L 
Sbjct: 7   KDAEIRMEKCVDAFKSHISKVRTGRASPSLLDGIQIDYYGLLTPLRQLANIIAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ +  +VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  ITVFDRTLAPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRRDLIKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K     ED     +++IQK+TD+ IK +DS   EK+ E+M  
Sbjct: 127 SVRNVRRDANDKVKALLKDKTIGEDEDRRSQDEIQKLTDAWIKKLDSALAEKEAELMEI 185


>gi|295689595|ref|YP_003593288.1| ribosome recycling factor [Caulobacter segnis ATCC 21756]
 gi|295431498|gb|ADG10670.1| ribosome recycling factor [Caulobacter segnis ATCC 21756]
          Length = 188

 Score =  241 bits (615), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 97/180 (53%), Positives = 125/180 (69%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +DRM   ++ LK++  +LRTGR S S+LD V VEAYGS  PLN VA+V+V EPR +
Sbjct: 9   LSRYRDRMDKAVAALKEEFGSLRTGRASASLLDQVMVEAYGSTTPLNAVASVSVPEPRQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            VSVWD+ +V SVE+ I  S LGLNP+VEGQ LRIP+P  TEERR  L K+A  YAE+ K
Sbjct: 69  NVSVWDRGVVVSVEKAIRASGLGLNPVVEGQNLRIPIPPLTEERRRDLQKIAGKYAEQQK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RRD  D LKK+ K G  +ED    +E ++QK+TD  IK ID   + K++EIM  
Sbjct: 129 IAVRNVRRDANDDLKKAEKDGAIAEDERKKMETEVQKLTDEAIKRIDEALKTKEQEIMQV 188


>gi|254785177|ref|YP_003072605.1| ribosome recycling factor [Teredinibacter turnerae T7901]
 gi|259494556|sp|C5BQF9|RRF_TERTT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|237684972|gb|ACR12236.1| ribosome recycling factor [Teredinibacter turnerae T7901]
          Length = 185

 Score =  241 bits (615), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  T+  L  +   +RTGR  PS+LD V V  YGS  PL+QVAN++VL+ R L 
Sbjct: 7   KDAEARMKKTVEALGINFNKIRTGRAHPSILDGVSVSYYGSDTPLSQVANISVLDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K MV  +E+ I +S+LGLNP+  G+++R+P+P  TEE R   +K A   AE++++
Sbjct: 67  LSPWEKSMVPEIEKAIMKSDLGLNPVTTGELIRVPMPALTEESRKGYIKQAKTEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD +  +K+  K  + SED     ++DIQKITD  +  +D+    K+K++M  
Sbjct: 127 SIRNVRRDVLADVKELLKEKEISEDDDRRAQDDIQKITDKYVAEVDAALAVKEKDLMEI 185


>gi|197335484|ref|YP_002156787.1| ribosome recycling factor [Vibrio fischeri MJ11]
 gi|226749945|sp|B5F9X3|RRF_VIBFM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|197316974|gb|ACH66421.1| ribosome recycling factor [Vibrio fischeri MJ11]
          Length = 185

 Score =  241 bits (615), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK +++ +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNNLLKVRTGRAHPSLLSGISVEYYGAKTPLNQVANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELAGLVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAENGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    +K   K  + SED     +++IQK+TD+ +K+ID     K+KE+M  
Sbjct: 127 AVRNIRRDANGDVKALLKEKEISEDDDRRAQDEIQKLTDAAVKSIDEVLAVKEKELMEV 185


>gi|315127161|ref|YP_004069164.1| ribosome releasing factor [Pseudoalteromonas sp. SM9913]
 gi|315015675|gb|ADT69013.1| ribosome releasing factor [Pseudoalteromonas sp. SM9913]
          Length = 173

 Score =  241 bits (615), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 72/173 (41%), Positives = 105/173 (60%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +++ L   +  +RTGR  P++LD + V  YG+  PLNQVANVT+ + R L + V+DK
Sbjct: 1   MQKSVAALGSQLSKIRTGRAHPAILDGIMVSYYGAPTPLNQVANVTIEDSRTLAIGVFDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            +  +VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+K+     E  ++++RNIR
Sbjct: 61  SLAQAVEKAIMASDLGLNPMSAGTVIRVPLPPLTEERRKDLIKIVRGEVEGGRVAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD    +K   K    SED     E+ IQKITD  IK +D+    K+ E+M  
Sbjct: 121 RDANGDIKNLLKDKDISEDEARQAEDAIQKITDKFIKEMDTQLTAKEAELMEI 173


>gi|114327599|ref|YP_744756.1| ribosome recycling factor [Granulibacter bethesdensis CGDNIH1]
 gi|114315773|gb|ABI61833.1| ribosome recycling factor (RRF) [Granulibacter bethesdensis
           CGDNIH1]
          Length = 202

 Score =  241 bits (615), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q++  RM   +  L+++   LR GR SP++L+ V+V+AYGS VPL QV N+ V E RML 
Sbjct: 24  QDLTRRMDGALETLRREFAGLRAGRASPALLEPVRVDAYGSEVPLTQVGNIGVPESRMLT 83

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWD+ +V++VE+ I +  LGLNP  EGQ++R+P+P  TEERR  L K A  YAE +++
Sbjct: 84  VQVWDRSLVSAVEKAIRDCGLGLNPQTEGQLIRVPLPMLTEERRNELAKAAGRYAESTRV 143

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++R +RRDGMD +K   K  +  ED   +  +++QK+TD  IK +D    EK+K+I   
Sbjct: 144 AIRAVRRDGMDQIKGHEKKSEIGEDEAKTWSDEVQKLTDHYIKRVDDALVEKEKDIRQV 202


>gi|307718990|ref|YP_003874522.1| ribosome recycling factor [Spirochaeta thermophila DSM 6192]
 gi|306532715|gb|ADN02249.1| ribosome recycling factor [Spirochaeta thermophila DSM 6192]
          Length = 184

 Score =  241 bits (615), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 76/177 (42%), Positives = 117/177 (66%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + + RM  ++  LK  + T+RTGR +P++ + + V  YG   PLNQVA+++  EPR++V+
Sbjct: 7   DAETRMKKSVHALKDQLATIRTGRATPALFEKITVNYYGQQTPLNQVASISAPEPRLVVI 66

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WDK ++  +E+ I  S+L LNP+ +G+VLRI +P  TEERR   +K+A   AE+S+++
Sbjct: 67  QPWDKSVLQEIEKAIQSSDLSLNPVNDGKVLRINIPPLTEERRKEYIKLAKNVAEQSRVA 126

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD  + LKK+ K G+ SED     E +IQK+T   I  I++  E K+KEIM 
Sbjct: 127 IRNIRRDANEALKKAEKEGQLSEDERKRGEEEIQKLTQKYIDEINNLLEAKEKEIME 183


>gi|167563185|ref|ZP_02356101.1| ribosome recycling factor [Burkholderia oklahomensis EO147]
 gi|167570368|ref|ZP_02363242.1| ribosome recycling factor [Burkholderia oklahomensis C6786]
          Length = 186

 Score =  241 bits (615), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHAGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I E++LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + LKK  K  + SED      +D+QK+TD  +  ID   + K+ EIM  
Sbjct: 128 AIRNLRRDANEALKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKLVQSKEAEIMTV 186


>gi|85712041|ref|ZP_01043095.1| Ribosome recycling factor [Idiomarina baltica OS145]
 gi|85694227|gb|EAQ32171.1| Ribosome recycling factor [Idiomarina baltica OS145]
          Length = 185

 Score =  241 bits (615), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 80/186 (43%), Positives = 121/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N +I  ++ K+RM  ++  L+  M  +RTGR  PS+LD V V  YG   PL Q+AN+T 
Sbjct: 2   INDII--KDAKERMEKSVESLRSQMSKVRTGRAHPSILDSVMVNYYGVDTPLKQLANITT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L ++V+DK    +VE+ I  S+LGLNP   G V+RIP+P  TEERR  LVK+  A
Sbjct: 60  EDSRTLALTVFDKSSAQAVEKAILTSDLGLNPASAGAVIRIPLPPLTEERRRDLVKIVRA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+++++VRNIRRD  + LK+  K  + +ED   S E+D+QK+TD+ +K ID   + K+
Sbjct: 120 EAEQARVAVRNIRRDANNDLKELLKEKEITEDEEHSAEDDVQKLTDTYVKKIDESLKAKE 179

Query: 181 KEIMHF 186
           +++M  
Sbjct: 180 QDLMEV 185


>gi|255656125|ref|ZP_05401534.1| ribosome recycling factor [Clostridium difficile QCD-23m63]
 gi|296450443|ref|ZP_06892199.1| ribosome recycling factor [Clostridium difficile NAP08]
 gi|296879434|ref|ZP_06903428.1| ribosome recycling factor [Clostridium difficile NAP07]
 gi|296260704|gb|EFH07543.1| ribosome recycling factor [Clostridium difficile NAP08]
 gi|296429580|gb|EFH15433.1| ribosome recycling factor [Clostridium difficile NAP07]
          Length = 185

 Score =  241 bits (615), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++++M  TI  LK +  T+R GR +  MLD ++V+ YG+  P+NQ+  ++V EPR+L+
Sbjct: 7   KQLEEKMNGTIDALKFEFGTIRAGRANAQMLDKIRVDYYGTPTPINQIGAISVPEPRILM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S WDK  +  +E+ I  S+LGLNP  +G+V+R+ VP  TEERR  L K A   AE  K+
Sbjct: 67  ISPWDKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAAEDFKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RN RRD  + +KK  K G+ +ED +   ++++QK+TD  IK ID+   +K+K+IM  
Sbjct: 127 RIRNERRDANEKIKKMEKGGELTEDELKKAQDEVQKMTDKFIKEIDTLLSKKEKDIMEV 185


>gi|134299822|ref|YP_001113318.1| ribosome recycling factor [Desulfotomaculum reducens MI-1]
 gi|172044307|sp|A4J5Z0|RRF_DESRM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|134052522|gb|ABO50493.1| ribosome recycling factor [Desulfotomaculum reducens MI-1]
          Length = 184

 Score =  240 bits (614), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 118/180 (65%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + +D M  ++  ++++  +LR GR +PS+LD V V  YG+  PLNQ+AN++V E R+L
Sbjct: 6   ISSAEDHMKKSVDVVRREFASLRAGRATPSILDKVTVSYYGTPTPLNQLANISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  VE+ I +S++G+ P  +G V+R+ +P+ T+ERR  LVKV    AE+ +
Sbjct: 66  VIQPWDKSVIPEVEKAILKSDVGITPSSDGTVIRLIIPQLTQERRTELVKVIKKKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D +K  +K G   ED     ++++QK+TD  +K ID   + K++EIM  
Sbjct: 126 VAVRNIRRDTNDSIKAKQKDG-IPEDEAKRGQDELQKLTDKYVKEIDEMVKAKEQEIMQV 184


>gi|254464577|ref|ZP_05077988.1| ribosome recycling factor [Rhodobacterales bacterium Y4I]
 gi|206685485|gb|EDZ45967.1| ribosome recycling factor [Rhodobacterales bacterium Y4I]
          Length = 187

 Score =  240 bits (614), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 86/182 (47%), Positives = 123/182 (67%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ L+ +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMANLRTEFASLRTGRASASMLEPVMVDAYGSMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAGHYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN+RRDGMD +KK++  G  SED     E ++Q++TD  IK++D   E K+ EIM
Sbjct: 127 ARVSIRNVRRDGMDQIKKAKADG-MSEDDQKFWEAEVQELTDKMIKHVDEALETKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|315186476|gb|EFU20236.1| ribosome recycling factor [Spirochaeta thermophila DSM 6578]
          Length = 184

 Score =  240 bits (614), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 76/177 (42%), Positives = 117/177 (66%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + + RM  ++  LK  + T+RTGR +P++ + + V  YG   PLNQVA+++  EPR++V+
Sbjct: 7   DAETRMKKSVHALKDQLATIRTGRATPALFEKITVNYYGQQTPLNQVASISAPEPRLVVI 66

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WDK ++  +E+ I  S+L LNP+ +G+VLRI +P  TEERR   +K+A   AE+S+++
Sbjct: 67  QPWDKSVLQEIEKAIQSSDLSLNPVNDGKVLRINIPPLTEERRKEYIKLAKNVAEQSRVA 126

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD  + LKK+ K G+ SED     E +IQK+T   I  I++  E K+KEIM 
Sbjct: 127 IRNIRRDANEALKKAEKEGRLSEDERKRGEEEIQKLTQKYIDEINNLLEAKEKEIME 183


>gi|238026905|ref|YP_002911136.1| ribosome recycling factor [Burkholderia glumae BGR1]
 gi|237876099|gb|ACR28432.1| Ribosome releasing factor [Burkholderia glumae BGR1]
          Length = 186

 Score =  240 bits (614), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  +I   K D+  +RTGR    +LD V+V+ YGS VP++QVAN+T+++ R + 
Sbjct: 8   KGVEQKMQRSIEAFKNDLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVANLTLVDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MVA VE+ I ES+LGLNP   G ++R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPWEKPMVAKVEKAIRESDLGLNPATSGDMIRVPMPALTEERRRELTKVVKSEGETAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + LKK  K  + SED      +++QK+TD  +  ID   + K  EIM  
Sbjct: 128 AVRNLRRDANEQLKKLVKDKEISEDDERRASDEVQKLTDKHVAEIDKLVQAKDAEIMTV 186


>gi|52425984|ref|YP_089121.1| ribosome recycling factor [Mannheimia succiniciproducens MBEL55E]
 gi|60390244|sp|Q65R74|RRF_MANSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|52308036|gb|AAU38536.1| Frr protein [Mannheimia succiniciproducens MBEL55E]
          Length = 185

 Score =  240 bits (614), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++V+ YGS  PL Q+ANV   + R L 
Sbjct: 7   KDTQDRMEKSLEALKGHIAKIRTGRAQPSLLDAIQVDYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ K+
Sbjct: 67  VTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E +IQKITDS IK +D    EK+KE+M F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENDQRKAEEEIQKITDSYIKKVDEVLAEKEKELMDF 185


>gi|296115044|ref|ZP_06833686.1| ribosome recycling factor [Gluconacetobacter hansenii ATCC 23769]
 gi|295978381|gb|EFG85117.1| ribosome recycling factor [Gluconacetobacter hansenii ATCC 23769]
          Length = 188

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 84/180 (46%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++  RM   I  L++D   LR+GR SP++L+ V+VEAYG  VPL QV ++ V E RML
Sbjct: 9   LADVTRRMDGAIESLRRDFAGLRSGRASPALLEPVRVEAYGGEVPLTQVGSIAVPEARML 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWD+ +V +VER I +S LGLNP  +GQ +R+P+P+ TEERR  L + A  YAE +K
Sbjct: 69  TVQVWDRSLVGAVERAIRDSGLGLNPAADGQTVRVPIPQLTEERRNELARAAGKYAENAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VR +RRDGM+  +   K G+ S+D V    + IQK+TD  +K +D    EK++EI   
Sbjct: 129 IAVRGVRRDGMEQTRGQEKKGEISQDDVKVWSDAIQKLTDQYVKRVDELLAEKEREIKQV 188


>gi|114777897|ref|ZP_01452811.1| Ribosome recycling factor [Mariprofundus ferrooxydans PV-1]
 gi|114551684|gb|EAU54236.1| Ribosome recycling factor [Mariprofundus ferrooxydans PV-1]
          Length = 181

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
              +++RM  ++  L+ ++ T+RTGR + ++LD V V  YGS VP NQV N++V EPR+L
Sbjct: 2   FDALEERMKKSVVALRSELATIRTGRANAALLDQVTVSYYGSEVPFNQVGNISVPEPRIL 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K ++  +E+ I +S+LGLNP  +G+V+RI +PE TE+RR  LVK A    EK++
Sbjct: 62  MITPWEKSIIGDIEKAILKSDLGLNPTSDGEVVRIMLPELTEDRRKELVKKARTIGEKAR 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D +KK  K     ED    L++ IQKITD  I  +D   E K+++I+  
Sbjct: 122 VSIRNIRRDANDEVKKQAKDDNLPEDESKRLQDRIQKITDKYIAEVDQVIEHKEQDILTV 181


>gi|218710315|ref|YP_002417936.1| ribosome recycling factor [Vibrio splendidus LGP32]
 gi|218323334|emb|CAV19511.1| Ribosome recycling factor [Vibrio splendidus LGP32]
          Length = 195

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + VE YG+  PL QVANV   + R L 
Sbjct: 17  KDAQERMVKSVDALKNSLQKIRTGRAHPSLLSGLTVEYYGAPTPLTQVANVIAEDARTLA 76

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK +   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 77  ITVFDKTLTPLVEKAIMTSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAEGGRV 136

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD+ +KN+D     K+KE+M  
Sbjct: 137 AIRNIRRDANGDLKALLKDKEISEDEDRKAQDEIQKLTDAAVKNVDEVLAVKEKELMEV 195


>gi|126699754|ref|YP_001088651.1| ribosome recycling factor [Clostridium difficile 630]
 gi|254975733|ref|ZP_05272205.1| ribosome recycling factor [Clostridium difficile QCD-66c26]
 gi|255093120|ref|ZP_05322598.1| ribosome recycling factor [Clostridium difficile CIP 107932]
 gi|255101273|ref|ZP_05330250.1| ribosome recycling factor [Clostridium difficile QCD-63q42]
 gi|255307149|ref|ZP_05351320.1| ribosome recycling factor [Clostridium difficile ATCC 43255]
 gi|255314862|ref|ZP_05356445.1| ribosome recycling factor [Clostridium difficile QCD-76w55]
 gi|255517536|ref|ZP_05385212.1| ribosome recycling factor [Clostridium difficile QCD-97b34]
 gi|255650647|ref|ZP_05397549.1| ribosome recycling factor [Clostridium difficile QCD-37x79]
 gi|260683737|ref|YP_003215022.1| ribosome recycling factor [Clostridium difficile CD196]
 gi|260687397|ref|YP_003218531.1| ribosome recycling factor [Clostridium difficile R20291]
 gi|306520574|ref|ZP_07406921.1| ribosome recycling factor [Clostridium difficile QCD-32g58]
 gi|122973796|sp|Q185S5|RRF_CLOD6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|115251191|emb|CAJ69022.1| Ribosome-recycling factor [Clostridium difficile]
 gi|260209900|emb|CBA63839.1| ribosome recycling factor [Clostridium difficile CD196]
 gi|260213414|emb|CBE05060.1| ribosome recycling factor [Clostridium difficile R20291]
          Length = 185

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++++M  TI  LK +  T+R GR +  MLD ++V+ YG+  P+NQ+  ++V EPR+L+
Sbjct: 7   KQLEEKMNGTIDALKFEFGTIRAGRANAQMLDKIRVDYYGTPTPINQIGAISVPEPRILM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S WDK  +  +E+ I  S+LGLNP  +G+V+R+ VP  TEERR  L K A   AE+ K+
Sbjct: 67  ISPWDKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAAEEFKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RN RRD  + +KK  K G+ +ED +   ++++QK+TD  IK ID+   +K+K+IM  
Sbjct: 127 RIRNERRDANEKIKKMEKGGELTEDELKKAQDEVQKMTDKFIKEIDTLLSKKEKDIMEV 185


>gi|90408931|ref|ZP_01217066.1| ribosome releasing factor [Psychromonas sp. CNPT3]
 gi|90309959|gb|EAS38109.1| ribosome releasing factor [Psychromonas sp. CNPT3]
          Length = 185

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + + RM  T+   K  +  +RTGR  PS+LD + V  YGS+ PL QV+N++  + R L 
Sbjct: 7   SDAQTRMSKTVESFKSQLAKVRTGRAHPSLLDGIMVPYYGSNTPLRQVSNISTEDSRTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D  ++A+VE+ I  SNLGLNP+  G V+RIP+P  TEERR  L+KV    AE S+I
Sbjct: 67  VTVFDATLIAAVEKAIMGSNLGLNPMSAGTVIRIPLPPLTEERRKDLIKVVRGEAENSRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K    SED +   E  +QK+T+ ++K+ID     K+KE+M  
Sbjct: 127 AIRNIRRDANGDLKGLEKDKDISEDDLRVGEELVQKVTNDSVKSIDDLLAVKEKELMEV 185


>gi|16126163|ref|NP_420727.1| ribosome recycling factor [Caulobacter crescentus CB15]
 gi|221234934|ref|YP_002517370.1| ribosome recycling factor [Caulobacter crescentus NA1000]
 gi|22001950|sp|Q9A706|RRF_CAUCR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809500|sp|B8GWS0|RRF_CAUCN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|13423373|gb|AAK23895.1| ribosome recycling factor [Caulobacter crescentus CB15]
 gi|220964106|gb|ACL95462.1| ribosome Recycling factor (RRF) [Caulobacter crescentus NA1000]
          Length = 188

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 98/180 (54%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +DRM   +S LK++  +LRTGR S S+LD V VEAYGS  PLN VA+V+V EPR +
Sbjct: 9   LSRYRDRMDKAVSALKEEFGSLRTGRASASLLDQVMVEAYGSTTPLNAVASVSVPEPRQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            VSVWD+ +V SVE+ I  S LGLNP+VEGQ LRIP+P  TEERR  L K+A  YAE+ K
Sbjct: 69  NVSVWDRGVVVSVEKAIRASGLGLNPVVEGQNLRIPIPPLTEERRRDLQKIAGKYAEQQK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RRD  D LKK+ K G  +ED    +E ++QK+TD  IK ID   + K+ EIM  
Sbjct: 129 IAVRNVRRDANDDLKKAEKDGAIAEDERKKMETEVQKMTDDAIKRIDEALKTKEHEIMQV 188


>gi|254420584|ref|ZP_05034308.1| ribosome recycling factor [Brevundimonas sp. BAL3]
 gi|196186761|gb|EDX81737.1| ribosome recycling factor [Brevundimonas sp. BAL3]
          Length = 185

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 96/181 (53%), Positives = 128/181 (70%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +++  +DRM   +  LK++   LRTGR +  +L+ V+VEAYGS  PL+ VA ++V EPRM
Sbjct: 5   EVKTYRDRMEKAVVALKEEFSGLRTGRANAGLLEPVRVEAYGSASPLSAVAAISVPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V+VWDK MV +VE+ I  +NLGLNPIV+GQ LRIPVP  TEERR  LVK+A  Y E+ 
Sbjct: 65  ISVNVWDKGMVVAVEKAIRNANLGLNPIVDGQTLRIPVPPLTEERRKDLVKLAGKYTEQQ 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           KI+VRN+RRD  D LKK+ K+G+ S+D    LE DIQK TD+ IK ID   + K++EIM 
Sbjct: 125 KIAVRNVRRDANDDLKKAEKAGEISQDEQKKLEADIQKETDAAIKRIDEALKTKEQEIMQ 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|16272749|ref|NP_438968.1| ribosome recycling factor [Haemophilus influenzae Rd KW20]
 gi|148827996|ref|YP_001292749.1| ribosome recycling factor [Haemophilus influenzae PittGG]
 gi|260579900|ref|ZP_05847730.1| ribosome recycling factor [Haemophilus influenzae RdAW]
 gi|1173172|sp|P44307|RRF_HAEIN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230791|sp|A5UHW0|RRF_HAEIG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|1573820|gb|AAC22467.1| ribosome releasing factor (rrf) [Haemophilus influenzae Rd KW20]
 gi|148719238|gb|ABR00366.1| ribosome recycling factor [Haemophilus influenzae PittGG]
 gi|260093184|gb|EEW77117.1| ribosome recycling factor [Haemophilus influenzae RdAW]
          Length = 185

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ K+
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D +K   K  + SE+     E +IQKITD  IK +D    +K+KE+M F
Sbjct: 127 AVRNVRRDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEVLADKEKELMDF 185


>gi|329767058|ref|ZP_08258586.1| ribosome-recycling factor [Gemella haemolysans M341]
 gi|328837783|gb|EGF87408.1| ribosome-recycling factor [Gemella haemolysans M341]
          Length = 185

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 78/186 (41%), Positives = 122/186 (65%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M + I + N+ +RM   I+ L++++ ++R G+ S ++LD + V+ YG   P+NQVA V+V
Sbjct: 1   MPEQI-MNNLNERMEKAIASLRRELASIRAGKASAAVLDRLTVDYYGVPTPINQVAGVSV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP+MLV+S ++K ++  +E+ I  S+LGLNP  +G V+RI  P  TEERR  L K+   
Sbjct: 60  PEPKMLVISPYEKTLLGDIEKVIQASDLGLNPANDGTVIRIVFPALTEERRKELAKLVGK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E +K++VRN+RRD MD +KK  KS + +ED +    +DIQK+TD  I  ID   +EK+
Sbjct: 120 ESEGAKVAVRNVRRDAMDSMKKLEKSSQITEDDLKGYSDDIQKVTDKFIAEIDKVTKEKQ 179

Query: 181 KEIMHF 186
            E+M  
Sbjct: 180 DELMSV 185


>gi|210622737|ref|ZP_03293329.1| hypothetical protein CLOHIR_01277 [Clostridium hiranonis DSM 13275]
 gi|210154069|gb|EEA85075.1| hypothetical protein CLOHIR_01277 [Clostridium hiranonis DSM 13275]
          Length = 185

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++ +M  TI  LK +  T+R GR + +MLD V+V+ YG+  P+NQ+A ++V EPR L+
Sbjct: 7   EQLEQKMDATIEALKFEFGTIRAGRANAAMLDKVRVDYYGTLTPINQMAAISVPEPRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WDK  +  +E+ I  S++GL P  +G V+R+ VP  TEERR  L K AH  +E  K+
Sbjct: 67  ITPWDKSSMHEIEKAIANSDVGLTPSNDGSVIRLSVPALTEERRKELAKKAHKASEDFKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RN RRD  D LKK  K+G+ +ED +     ++QKITD  IK IDS + +K+K+IM  
Sbjct: 127 RIRNERRDANDKLKKIEKAGEITEDELKKATEEVQKITDKYIKEIDSLYAKKEKDIMEV 185


>gi|325661706|ref|ZP_08150329.1| ribosome-recycling factor [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471959|gb|EGC75174.1| ribosome-recycling factor [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 183

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 116/186 (62%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+ +++    ++M  + + L  ++ T+R GR +P +LD + V+ YGS  P+ QVANV+V
Sbjct: 1   MNERLNV--FNEKMEKSYNSLTSELATIRAGRANPHVLDKLTVDYYGSPTPIQQVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+K MV  +E+ I  S++G+NP  +G V+R+  PE TEERR  LVK    
Sbjct: 59  PEARMIQIQPWEKSMVREIEKAILTSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  K++VRNIRRDG D  KK  K  + SED +  LE+++QK+TD  I  ID   E K 
Sbjct: 119 KGEAGKVAVRNIRRDGNDTFKKL-KGTEVSEDEIKDLEDELQKLTDKYIAQIDKAVEAKS 177

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 178 KEVMTV 183


>gi|289208668|ref|YP_003460734.1| ribosome recycling factor [Thioalkalivibrio sp. K90mix]
 gi|288944299|gb|ADC71998.1| ribosome recycling factor [Thioalkalivibrio sp. K90mix]
          Length = 185

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ + RM  +I  L+ ++  +RTGR  PS+L+ V V+ YG  VP+NQVAN+   + R L
Sbjct: 6   IKDARQRMDKSIEALRNELAKIRTGRAHPSLLEHVHVDYYGMEVPINQVANINAEDSRTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  ++K+MVA VE+ I  S+LGLNP   G V+R+P+P  TEERR  LVKV  A AE ++
Sbjct: 66  AVVPYEKDMVAKVEKAIMTSDLGLNPASMGTVIRVPLPALTEERRRDLVKVVRAEAENAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  +  K++ K  + SED     +  +QK+TD  I  ID+  E+K+ E+M  
Sbjct: 126 VAVRNIRRDANNTFKQAVKDKEVSEDEERKAQEQVQKLTDDHIAKIDALLEDKEAELMEV 185


>gi|149202144|ref|ZP_01879117.1| ribosome recycling factor [Roseovarius sp. TM1035]
 gi|149144242|gb|EDM32273.1| ribosome recycling factor [Roseovarius sp. TM1035]
          Length = 187

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 86/182 (47%), Positives = 121/182 (66%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  +++ RM   I  LK +  +LRTGR S SML+ + V+AYG   P+NQV  V V EPR
Sbjct: 7   IDTGDLERRMEGAIGALKTEFASLRTGRASASMLEPIMVDAYGQKTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  E+RR  L KVA  YAE 
Sbjct: 67  MVTVNVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEQRRKELTKVAAQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMD +KK++  G  SED     E+++Q +TD  IK++D   E K+ EIM
Sbjct: 127 ARVAVRNVRRDGMDQIKKAKGDG-MSEDDQKFWESEVQSLTDRFIKHVDELLEGKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|313888244|ref|ZP_07821915.1| ribosome recycling factor [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845647|gb|EFR33037.1| ribosome recycling factor [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 185

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 121/179 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + RM  +I  L + + ++R GR + S+LD + V+ YG   PLNQVA+++  E R+L 
Sbjct: 7   KNTESRMSKSIDSLTESLQSIRAGRANTSLLDRIYVDYYGQQSPLNQVASLSAPEARLLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD  ++  +E+ I +S+LG+ P  +G+++R+ +P+ TEERR  L K+   YAE++K+
Sbjct: 67  IQPWDATLIPEIEKAIQKSDLGITPSNDGKIIRLVIPQLTEERRKDLTKLVGKYAEEAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD M+ +KK+ K+ + SED   + E DIQK+TD  IK++DS   +K+KE+M  
Sbjct: 127 SIRNIRRDAMEDIKKAEKAKEISEDDRKTYEEDIQKLTDKYIKDVDSVAADKEKELMEI 185


>gi|302525191|ref|ZP_07277533.1| ribosome recycling factor [Streptomyces sp. AA4]
 gi|302434086|gb|EFL05902.1| ribosome recycling factor [Streptomyces sp. AA4]
          Length = 185

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  K+D+ ++RTGR  PSM   + VE YG+  PLNQ+A+V V E RM 
Sbjct: 6   LLDAEEKMEKAVSVAKEDLTSVRTGRAHPSMFSRIVVEYYGAPTPLNQLASVNVPEARMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  + ++E+ I ES+LG+NP  +G V+RI +P+ TEERR  +VKVA    E ++
Sbjct: 66  LIKPYDQTQLNAIEKAIRESDLGVNPSNDGNVIRIVIPQLTEERRKEMVKVAKGKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R+IRR   + L +  K G+A ED VA  E ++Q +TD+ +  +D   + K+ E++  
Sbjct: 126 VSIRSIRRKAKEELDRIAKDGEAGEDEVARAEKELQNLTDTYVHQVDELVKHKEAELLEV 185


>gi|152978335|ref|YP_001343964.1| ribosome recycling factor [Actinobacillus succinogenes 130Z]
 gi|171704207|sp|A6VM32|RRF_ACTSZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|150840058|gb|ABR74029.1| ribosome recycling factor [Actinobacillus succinogenes 130Z]
          Length = 185

 Score =  240 bits (614), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++V+ YG+  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVDYYGAATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L K+  A  E+ K+
Sbjct: 67  VTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLTKLVKAEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + +K   K  + SE+     E+DIQK+TDS +K +D    +K+KE+M F
Sbjct: 127 AVRNVRRDANEKIKALLKDKEISENEQRKAEDDIQKLTDSFVKKVDEVLADKEKELMDF 185


>gi|229845859|ref|ZP_04465971.1| ribosome recycling factor [Haemophilus influenzae 7P49H1]
 gi|229810863|gb|EEP46580.1| ribosome recycling factor [Haemophilus influenzae 7P49H1]
          Length = 185

 Score =  240 bits (614), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ K+
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRNLIKIVKGEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E +IQKITD  IK +D    +K+KE+M F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEVLADKEKELMDF 185


>gi|330445148|ref|ZP_08308800.1| ribosome recycling factor [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489339|dbj|GAA03297.1| ribosome recycling factor [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 185

 Score =  240 bits (613), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 120/179 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  ++  LK  ++ +RTGR  PS+LD + VE YG++ PLNQVANV   + R L 
Sbjct: 7   QDAQSRMEKSVEALKNQLVKIRTGRAHPSLLDTISVEYYGANTPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+  A AE+ ++
Sbjct: 67  ITVFDRELAPKVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD   ++K   K  + SED     +++IQK+TD  IKNID+  E K+KE+M  
Sbjct: 127 AVRNIRRDANANVKALLKDKEISEDDDRRAQDEIQKLTDDAIKNIDAVLEVKEKELMEV 185


>gi|253999117|ref|YP_003051180.1| ribosome recycling factor [Methylovorus sp. SIP3-4]
 gi|313201218|ref|YP_004039876.1| ribosome recycling factor [Methylovorus sp. MP688]
 gi|253985796|gb|ACT50653.1| ribosome recycling factor [Methylovorus sp. SIP3-4]
 gi|312440534|gb|ADQ84640.1| ribosome recycling factor [Methylovorus sp. MP688]
          Length = 185

 Score =  240 bits (613), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  ++  LK D+  +RTGR    +LD V VE YGS V +NQVANVT+ + R + 
Sbjct: 7   KNAEQKMQKSLESLKSDLGKVRTGRAHTGLLDHVMVEYYGSMVAVNQVANVTLGDARTIN 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K MVA +E+ I + +LGLNP   G V+R+P+P  TEERR  L+KV     E +K+
Sbjct: 67  VQPYEKNMVAKIEKAIRDGDLGLNPATNGDVIRVPMPMLTEERRRDLIKVVRTEGENAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D LKK  K  + SED    +++++QK+TD  +  +D   + K+ ++M  
Sbjct: 127 AIRNVRRDANDQLKKLTKDKEISEDDERRMQDEVQKLTDRFVAEVDKLLQVKEADLMAV 185


>gi|266622994|ref|ZP_06115929.1| ribosome recycling factor [Clostridium hathewayi DSM 13479]
 gi|288865250|gb|EFC97548.1| ribosome recycling factor [Clostridium hathewayi DSM 13479]
          Length = 184

 Score =  240 bits (613), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 82/181 (45%), Positives = 118/181 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
            LQ  +D+M  T+  L+ D MT+R GR +P +LD +KV+ YG+  PL QV N+ V E RM
Sbjct: 4   SLQVYEDKMNKTLEVLESDYMTIRAGRANPHVLDKIKVDYYGTPTPLQQVGNINVPEARM 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +++  W+K ++ ++E+ I  S+LG+NP  +G V+R+  PE TEERR  LVK      E +
Sbjct: 64  IIIQPWEKSLLKAIEKAILTSDLGINPTNDGSVIRLVFPELTEERRKELVKDVKKKGEAA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K++VRNIRRDG D+ KK +K+ + SED +A  E DIQK+TD  I  ID   E K KE++ 
Sbjct: 124 KVAVRNIRRDGNDYFKKLQKADEISEDDLAEAEEDIQKLTDKMIGKIDKAIEAKSKELLT 183

Query: 186 F 186
            
Sbjct: 184 V 184


>gi|190360296|sp|Q21HH5|RRF_SACD2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 185

 Score =  240 bits (613), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + ++RM   I  L      +RTGR  PS+LD V V  YGS  PL+QVANVTVL+ R L 
Sbjct: 7   SDSEERMSRAIEALGTHFNKIRTGRAHPSILDGVMVSYYGSATPLSQVANVTVLDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K +V  +E+ I +S+LGLNP+  G ++R+P+P  TEE R   +K A A AE +++
Sbjct: 67  ISPWEKNIVPEIEKAIMKSDLGLNPVTTGDLIRVPMPMLTEETRKGYIKRARAEAESARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD +  +K   K  + SED      ++IQ+IT+  +  +D     K+K++M  
Sbjct: 127 SIRNVRRDALAEVKALVKDKEISEDDERRAADEIQQITNKYVAEVDKALSAKEKDLMEI 185


>gi|119774279|ref|YP_927019.1| ribosome recycling factor [Shewanella amazonensis SB2B]
 gi|166231223|sp|A1S4P3|RRF_SHEAM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119766779|gb|ABL99349.1| ribosome recycling factor [Shewanella amazonensis SB2B]
          Length = 185

 Score =  240 bits (613), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRMG  +   K  M  +RTGR  PS+LD ++V  YGS  PL QV NVT+ + R L 
Sbjct: 7   KDAQDRMGKCVEATKAQMAKVRTGRAHPSLLDTIQVNYYGSMTPLKQVGNVTIEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+  + +VE+ I  S+LGLNP+  G  +RIP+P  TEERR  LVKV  A AE+ ++
Sbjct: 67  VNVFDRSAIQAVEKAIMSSDLGLNPMSAGATIRIPLPPLTEERRRDLVKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD     K+  K  + +ED V   E ++QKITD  IK ID     K+ E+M  
Sbjct: 127 AIRNVRRDANSSFKQLEKEKECTEDDVRRSEEEVQKITDLHIKKIDELLAAKEAELMEV 185


>gi|260583805|ref|ZP_05851553.1| ribosome recycling factor [Granulicatella elegans ATCC 700633]
 gi|260158431|gb|EEW93499.1| ribosome recycling factor [Granulicatella elegans ATCC 700633]
          Length = 186

 Score =  240 bits (613), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 123/186 (66%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M     + N K+RM  T   L++++  +R GR + S+LD ++VE YG   P+NQ+A+VTV
Sbjct: 1   MTATEIIANAKERMKKTEDALQRELGGIRAGRANASLLDRLQVEYYGVPTPVNQLASVTV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML+++ +DK  +  +ER I  S++G+ P  +G V+R+ +P+ TEERR  L K    
Sbjct: 61  PEARMLLITPYDKSSLQDIERAILMSDIGITPTNDGSVVRLVIPQLTEERRKELAKQVGK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE +K+SVRNIRRD ++HLKK+ K+ + +ED +   E DIQK+TD ++KNID   + K+
Sbjct: 121 EAEGAKVSVRNIRRDAIEHLKKAEKNKEITEDDLRGYEKDIQKLTDDSVKNIDHLAQVKE 180

Query: 181 KEIMHF 186
           KE++  
Sbjct: 181 KELLEV 186


>gi|254496412|ref|ZP_05109292.1| ribosome recycling factor [Legionella drancourtii LLAP12]
 gi|254354359|gb|EET13014.1| ribosome recycling factor [Legionella drancourtii LLAP12]
          Length = 185

 Score =  240 bits (613), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  TI  L  DM  +RTGR +  +LD V+V+ YG+  PLNQ+AN+T  + R + 
Sbjct: 7   QDSEKRMRKTIDSLHIDMSKIRTGRANVGLLDHVQVDYYGTLTPLNQIANITASDSRTIS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K MVA+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV     E+ K+
Sbjct: 67  VTPWEKNMVAAVEKAILTSDLGLNPATNGNAIRVPMPPLTEERRKELIKVVRNEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  + LK+  K    SED      + IQK+TD  I  +D+    K+K++M  
Sbjct: 127 SIRNIRRDANNQLKELVKEKAISEDDERRAVDVIQKLTDKYILEVDALLAVKEKDLMEV 185


>gi|120599549|ref|YP_964123.1| ribosome recycling factor [Shewanella sp. W3-18-1]
 gi|146292454|ref|YP_001182878.1| ribosome recycling factor [Shewanella putrefaciens CN-32]
 gi|166231227|sp|A4Y546|RRF_SHEPC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231510|sp|A1RLM4|RRF_SHESW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120559642|gb|ABM25569.1| ribosome recycling factor [Shewanella sp. W3-18-1]
 gi|145564144|gb|ABP75079.1| ribosome recycling factor [Shewanella putrefaciens CN-32]
 gi|319425756|gb|ADV53830.1| ribosome recycling factor [Shewanella putrefaciens 200]
          Length = 185

 Score =  240 bits (613), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV V + R L 
Sbjct: 7   KDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVEDSRTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV  A AE  ++
Sbjct: 67  VTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +  +KK  K+ + +ED V   E+D+QK TD+ IK +D     K+ E+M  
Sbjct: 127 AIRNVRRDAISEVKKLEKAKECTEDDVRRFEDDVQKFTDAHIKKVDEILAAKEIELMEV 185


>gi|68249403|ref|YP_248515.1| ribosome recycling factor [Haemophilus influenzae 86-028NP]
 gi|145630555|ref|ZP_01786335.1| ribosome recycling factor [Haemophilus influenzae R3021]
 gi|145632167|ref|ZP_01787902.1| ribosome recycling factor [Haemophilus influenzae 3655]
 gi|145634780|ref|ZP_01790488.1| ribosome recycling factor [Haemophilus influenzae PittAA]
 gi|145636632|ref|ZP_01792299.1| ribosome recycling factor [Haemophilus influenzae PittHH]
 gi|145640909|ref|ZP_01796491.1| ribosome recycling factor [Haemophilus influenzae R3021]
 gi|229844676|ref|ZP_04464815.1| ribosome recycling factor [Haemophilus influenzae 6P18H1]
 gi|260581625|ref|ZP_05849422.1| ribosome recycling factor [Haemophilus influenzae NT127]
 gi|319775258|ref|YP_004137746.1| ribosome recycling factor [Haemophilus influenzae F3047]
 gi|319897698|ref|YP_004135895.1| ribosome recycling factor [Haemophilus influenzae F3031]
 gi|329122815|ref|ZP_08251387.1| ribosome recycling factor [Haemophilus aegyptius ATCC 11116]
 gi|81336171|sp|Q4QM92|RRF_HAEI8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|68057602|gb|AAX87855.1| ribosome recycling factor [Haemophilus influenzae 86-028NP]
 gi|144983945|gb|EDJ91387.1| ribosome recycling factor [Haemophilus influenzae R3021]
 gi|144987074|gb|EDJ93604.1| ribosome recycling factor [Haemophilus influenzae 3655]
 gi|145267946|gb|EDK07942.1| ribosome recycling factor [Haemophilus influenzae PittAA]
 gi|145270158|gb|EDK10094.1| ribosome recycling factor [Haemophilus influenzae PittHH]
 gi|145274423|gb|EDK14287.1| ribosome recycling factor [Haemophilus influenzae 22.4-21]
 gi|229812390|gb|EEP48080.1| ribosome recycling factor [Haemophilus influenzae 6P18H1]
 gi|260095218|gb|EEW79109.1| ribosome recycling factor [Haemophilus influenzae NT127]
 gi|301169527|emb|CBW29128.1| ribosome recycling factor [Haemophilus influenzae 10810]
 gi|309973700|gb|ADO96901.1| Ribosome releasing factor [Haemophilus influenzae R2846]
 gi|317433204|emb|CBY81578.1| ribosome recycling factor [Haemophilus influenzae F3031]
 gi|317449849|emb|CBY86059.1| ribosome recycling factor [Haemophilus influenzae F3047]
 gi|327472079|gb|EGF17517.1| ribosome recycling factor [Haemophilus aegyptius ATCC 11116]
          Length = 185

 Score =  240 bits (613), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ K+
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E +IQKITD  IK +D    +K+KE+M F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEVLADKEKELMDF 185


>gi|299534751|ref|ZP_07048081.1| ribosome recycling factor [Lysinibacillus fusiformis ZC1]
 gi|298729839|gb|EFI70384.1| ribosome recycling factor [Lysinibacillus fusiformis ZC1]
          Length = 185

 Score =  240 bits (613), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K++M  TI+   +++ ++R GR + S+LD + V+ YG+  P+NQ+A V++ E R+L
Sbjct: 6   LEQAKEKMNKTIAAFSRELASIRAGRANASLLDRISVDYYGAATPINQLAGVSIPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK ++  +E+ I +S++G+ P  +G V+R+ +P  TEERR  LVK     AE +K
Sbjct: 66  VITPYDKSILGDIEKAIMKSDIGITPTNDGSVIRLMIPALTEERRKDLVKQVKKEAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RRD  D LKK  K+G+ +ED +     DIQK+TD  I  +D   ++K+KEI+  
Sbjct: 126 IAVRNVRRDANDDLKKLEKAGEITEDDLRGYGEDIQKLTDEFIVKVDQVAKDKEKEILEV 185


>gi|218439649|ref|YP_002377978.1| ribosome recycling factor [Cyanothece sp. PCC 7424]
 gi|226703257|sp|B7K7R4|RRF_CYAP7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|218172377|gb|ACK71110.1| ribosome recycling factor [Cyanothece sp. PCC 7424]
          Length = 182

 Score =  240 bits (613), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 66/177 (37%), Positives = 110/177 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++D M  TI   ++   T+RTGR + ++LD V V+ YG+  PL  +AN+T  +   +
Sbjct: 3   LSEVQDNMQKTIESTQRSFNTIRTGRANSALLDRVMVDYYGTETPLKSLANITTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  +  +E+ I  S++GL P  +GQ++R+ +P  T ERR  LVK+A   AE+ K
Sbjct: 63  AIQPYDRGSMGQIEKAIQLSDIGLTPNNDGQMIRLNIPPLTTERRKELVKLAGKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD +D ++K  K+ + SED   +L+++IQK+TD     ID     K+K+I
Sbjct: 123 VAIRNIRRDAIDSVRKQEKNHELSEDESRNLQDEIQKVTDEYTAKIDELLAAKEKDI 179


>gi|212704264|ref|ZP_03312392.1| hypothetical protein DESPIG_02319 [Desulfovibrio piger ATCC 29098]
 gi|212672344|gb|EEB32827.1| hypothetical protein DESPIG_02319 [Desulfovibrio piger ATCC 29098]
          Length = 186

 Score =  240 bits (613), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRM   ++ L++D   LRTGR + +++D +K + YG+  P++Q+A+V V + R +
Sbjct: 7   LLDTEDRMEKAMAALERDFQKLRTGRATTALVDGIKADYYGTPTPISQMASVAVPDSRTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  ++ VE+ I +S+LGL P+ +G+++RI +P  TEERR  LVKVA  Y E +K
Sbjct: 67  TIQPWDKGGISVVEKAILKSDLGLTPVNDGRIIRINIPPLTEERRKELVKVARKYTEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D LKK  K    +ED     E ++QK+TD  + + D   + K+KEIM  
Sbjct: 127 VAVRNVRRDANDSLKKLEKEKAITEDEQKKAEAEVQKLTDKFVADADKRSQAKEKEIMDI 186


>gi|224066503|ref|XP_002302112.1| predicted protein [Populus trichocarpa]
 gi|222843838|gb|EEE81385.1| predicted protein [Populus trichocarpa]
          Length = 286

 Score =  240 bits (613), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + K RM  TI  ++ +  ++RTGR +PSMLD ++VE YG+ V L  +A ++  +   L+
Sbjct: 108 DDAKGRMEKTIDTMRANFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLL 167

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  + ++E+ I  S+LGL P  +G+V+R+ +P+ T ERR  L K+    AE+ K+
Sbjct: 168 VQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKV 227

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +   +K  K  K SED V  L +D+QK+TD  +K +++ F++K+KE++  
Sbjct: 228 ALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLENIFKQKEKELLKV 286


>gi|85708126|ref|ZP_01039192.1| ribosome recycling factor [Erythrobacter sp. NAP1]
 gi|85689660|gb|EAQ29663.1| ribosome recycling factor [Erythrobacter sp. NAP1]
          Length = 185

 Score =  239 bits (612), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 85/180 (47%), Positives = 122/180 (67%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  + + RM   +  LK D+  LRTGR + S+LD V VE YGS +PL  VA V   EPR
Sbjct: 4   YDKADTERRMNGAVESLKGDLSGLRTGRANTSLLDPVVVEVYGSMMPLASVATVNTPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V VWDK  V++VE+GI ++NLGLNP+ +GQ +R+P+P+ TEERR  L K+A  YAEK
Sbjct: 64  MISVQVWDKSNVSAVEKGITKANLGLNPMTDGQTIRLPMPDLTEERRKELAKLAGQYAEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +KI++RN+RRD M+ LK   K  + SED    +E+++QK+TD  + + D    +K++EI+
Sbjct: 124 AKIAIRNVRRDAMESLKTDEKKKEISEDDRKRMEDEVQKLTDKYVADTDEAAAKKEQEIL 183


>gi|113970973|ref|YP_734766.1| ribosome recycling factor [Shewanella sp. MR-4]
 gi|114048197|ref|YP_738747.1| ribosome recycling factor [Shewanella sp. MR-7]
 gi|123130244|sp|Q0HGV8|RRF_SHESM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123131225|sp|Q0HT65|RRF_SHESR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|113885657|gb|ABI39709.1| ribosome recycling factor [Shewanella sp. MR-4]
 gi|113889639|gb|ABI43690.1| ribosome recycling factor [Shewanella sp. MR-7]
          Length = 185

 Score =  239 bits (612), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV + + R L 
Sbjct: 7   KDAQERMGKCVEATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGIEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV  A AE  ++
Sbjct: 67  VTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +  +KK  K+ + +ED V   E+++QK TD+ IK +D     K+ E+M  
Sbjct: 127 AIRNVRRDAISDVKKLEKAKECTEDDVRRFEDEVQKFTDAHIKKVDEILAAKEIELMEV 185


>gi|99081254|ref|YP_613408.1| ribosome recycling factor [Ruegeria sp. TM1040]
 gi|122984285|sp|Q1GGS0|RRF_SILST RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|99037534|gb|ABF64146.1| ribosome recycling factor [Ruegeria sp. TM1040]
          Length = 187

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 88/188 (46%), Positives = 126/188 (67%), Gaps = 3/188 (1%)

Query: 1   MNQVIDLQ--NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M++  +L   ++K RM   ++ LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V
Sbjct: 1   MSEEFELDTDDLKRRMDGAMANLKTEFASLRTGRASASMLEPVMVDAYGSMTPINQVGTV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
            V EPRM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA
Sbjct: 61  NVPEPRMVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
             YAE +++S+RN+RRDGMD +KK++  G  SED     E ++Q++TD  IK +D+  E 
Sbjct: 121 GQYAEHARVSIRNVRRDGMDQIKKAKADG-MSEDDQKFWETEVQELTDKMIKAVDAALET 179

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 180 KQAEIMQV 187


>gi|317493185|ref|ZP_07951608.1| ribosome recycling protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918845|gb|EFV40181.1| ribosome recycling protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 185

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K ++  +RTGR  P++LD + VE YGS  PL QVANV   + R L 
Sbjct: 7   KDAETRMDKCVEAFKSNISKIRTGRAHPNLLDGISVEYYGSATPLRQVANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP+  G V+R+P+P  TEERR  L+K+  A AE+ ++
Sbjct: 67  ITVFDRSLSAAVEKAIMASDLGLNPMSAGAVIRVPLPALTEERRKDLIKLVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D +K   K  + SED     ++++QK+TD  IK IDS   +K+KE+M  
Sbjct: 127 SVRNVRRDANDKVKVLLKDKEISEDEDRKSQDEVQKMTDVMIKKIDSALADKEKELMEV 185


>gi|284048715|ref|YP_003399054.1| ribosome recycling factor [Acidaminococcus fermentans DSM 20731]
 gi|283952936|gb|ADB47739.1| ribosome recycling factor [Acidaminococcus fermentans DSM 20731]
          Length = 187

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 78/187 (41%), Positives = 120/187 (64%), Gaps = 1/187 (0%)

Query: 1   MNQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  + +LQ   +++M   +  L+ ++  +RTGR +PS+LD VKV+ YG+  P+ QVANV+
Sbjct: 1   MATIEELQTKTQEKMDKALHALRNELTNIRTGRATPSLLDQVKVDYYGAPTPVTQVANVS 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           V EPRM+V+  WD+ ++  +E+ I  S+LGLNP  +G V+R+ +P  TEERR  LVKV +
Sbjct: 61  VPEPRMIVIQPWDRSLLKVIEKAIMTSDLGLNPNNDGTVIRLNLPLLTEERRKELVKVVN 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E S++ +RNIRRD  D +KK  K+ + +ED      +  QK+TD  +K ID    +K
Sbjct: 121 KKGEASRVEIRNIRRDFNDAVKKQVKAKEITEDDAKDATDFSQKLTDKFMKKIDDVLAQK 180

Query: 180 KKEIMHF 186
           +KE+M  
Sbjct: 181 EKEVMSV 187


>gi|117921253|ref|YP_870445.1| ribosome recycling factor [Shewanella sp. ANA-3]
 gi|166231228|sp|A0KZ20|RRF_SHESA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|117613585|gb|ABK49039.1| ribosome recycling factor [Shewanella sp. ANA-3]
          Length = 185

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV + + R L 
Sbjct: 7   KDAQERMGKCVEATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGIEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV  A AE  ++
Sbjct: 67  VTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +  +KK  K+ + +ED V   E+++QK TD+ IK +D     K+ E+M  
Sbjct: 127 AIRNVRRDAISEVKKLEKAKECTEDDVRRFEDEVQKFTDAHIKKVDEILAAKEIELMEV 185


>gi|37680738|ref|NP_935347.1| ribosome recycling factor [Vibrio vulnificus YJ016]
 gi|320155595|ref|YP_004187974.1| ribosome recycling factor [Vibrio vulnificus MO6-24/O]
 gi|39932018|sp|Q7MIG3|RRF_VIBVY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|37199487|dbj|BAC95318.1| ribosome recycling factor [Vibrio vulnificus YJ016]
 gi|319930907|gb|ADV85771.1| ribosome recycling factor [Vibrio vulnificus MO6-24/O]
          Length = 185

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PL QVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNSLSKVRTGRAHPSLLSGISVDYYGAATPLTQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     +++IQK+TD+ +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANSDLKALLKEKEISEDEDRKAQDEIQKLTDAAVKKIDDVLAAKEKELMEV 185


>gi|227824516|ref|ZP_03989348.1| ribosome recycling factor [Acidaminococcus sp. D21]
 gi|226905015|gb|EEH90933.1| ribosome recycling factor [Acidaminococcus sp. D21]
          Length = 187

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 78/187 (41%), Positives = 120/187 (64%), Gaps = 1/187 (0%)

Query: 1   MNQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  + +L+ + + +M   +  L  ++  +RTGR +PS+LD VKV+ YG+  P+NQ+ANV+
Sbjct: 1   MATIEELKADSERKMTSALKALHTELAAIRTGRATPSLLDQVKVDYYGTATPVNQLANVS 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           V EPRM+V+  WDK ++  +E+ I  S+LGLNP  +G V+R+ +P  TEERR  LVKV H
Sbjct: 61  VPEPRMIVIQPWDKSLMKEIEKAIMTSDLGLNPNNDGTVIRLSLPILTEERRKELVKVVH 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E ++++VRNIRR+  D +KK  K  + +ED      +  QK+TD  +K ID    +K
Sbjct: 121 KKGESARVAVRNIRREYNDAVKKLLKGKEITEDDSKDAMDASQKLTDQYMKQIDDILAKK 180

Query: 180 KKEIMHF 186
           +KE+M  
Sbjct: 181 EKEVMSI 187


>gi|212636274|ref|YP_002312799.1| ribosome recycling factor [Shewanella piezotolerans WP3]
 gi|226703268|sp|B8CQ82|RRF_SHEPW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|212557758|gb|ACJ30212.1| Ribosome recycling factor [Shewanella piezotolerans WP3]
          Length = 185

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 81/178 (45%), Positives = 114/178 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + + RM   +   K  M  +RTGR  PS+LD ++V  YGS  PL QVA+V++ + R L V
Sbjct: 8   DAQTRMDKCVESTKTQMAKVRTGRAHPSLLDTIQVPYYGSLTPLKQVASVSIGDARTLNV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           SV+D+ M+A+VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KV  A AE  +I+
Sbjct: 68  SVFDRTMIAAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRN+RRD    +K   K  + +ED V   E+++QK TD+ IK ID     K+KE+M F
Sbjct: 128 VRNVRRDANSDVKALEKEKECTEDDVRRTEDEVQKFTDAHIKKIDEILAAKEKELMEF 185


>gi|163736296|ref|ZP_02143715.1| ribosome recycling factor [Phaeobacter gallaeciensis BS107]
 gi|163741175|ref|ZP_02148567.1| ribosome recycling factor [Phaeobacter gallaeciensis 2.10]
 gi|161385528|gb|EDQ09905.1| ribosome recycling factor [Phaeobacter gallaeciensis 2.10]
 gi|161390166|gb|EDQ14516.1| ribosome-recycling factor [Phaeobacter gallaeciensis BS107]
          Length = 187

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 86/185 (46%), Positives = 125/185 (67%), Gaps = 1/185 (0%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++D  +++ RM   ++ LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V V 
Sbjct: 4   DFILDTDDLQRRMDGAMANLKTEFASLRTGRASASMLEPVMVDAYGSMTPINQVGTVNVP 63

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPRM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y
Sbjct: 64  EPRMVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRDLTKVAGQY 123

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE +++S+RN+RRDGMD +KK++  G  SED     E ++Q++TD  IK +D+  E K+ 
Sbjct: 124 AEHARVSIRNVRRDGMDQIKKAKADG-MSEDDQKLWEGEVQELTDKMIKVVDAALETKQA 182

Query: 182 EIMHF 186
           EIM  
Sbjct: 183 EIMQV 187


>gi|121602369|ref|YP_988895.1| ribosome recycling factor [Bartonella bacilliformis KC583]
 gi|48474236|sp|Q8RT64|RRF_BARBK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|18920725|gb|AAL82407.1|AF469610_3 ribosome recycling factor [Bartonella bacilliformis]
 gi|120614546|gb|ABM45147.1| ribosome recycling factor [Bartonella bacilliformis KC583]
          Length = 186

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 98/186 (52%), Positives = 130/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    + ++K RM   IS  K ++  LRTGR S S+L+ + VEAYGS VP+ QVAN++V
Sbjct: 1   MSVTSIMDDLKRRMDGAISAFKHELSGLRTGRASASLLEPLTVEAYGSVVPIKQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           LEPRML VSVWDK MV +VER I +   GLNPIV+G  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  LEPRMLSVSVWDKTMVGAVERAIRDCGFGLNPIVDGMNLRIPLPELNEERRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE++++++R++RRDGMD+LKK  K G+ S+D   SL   +QK+TD  I +ID     K+
Sbjct: 121 YAEQARVAIRHVRRDGMDNLKKLEKEGEISQDEARSLSEKVQKLTDDAIADIDKILIMKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 TEIMQV 186


>gi|167624892|ref|YP_001675186.1| ribosome recycling factor [Shewanella halifaxensis HAW-EB4]
 gi|189044075|sp|B0TP80|RRF_SHEHH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167354914|gb|ABZ77527.1| ribosome recycling factor [Shewanella halifaxensis HAW-EB4]
          Length = 185

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + + RM   +   K  M  +RTGR  PS+LD ++V  YGS  PL QVA+V++ + R L 
Sbjct: 7   SDAQTRMDKCVESTKTQMAKVRTGRAHPSLLDTIQVPYYGSLTPLKQVASVSIGDARTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VSV+D+ M+A+VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KV  A AE  +I
Sbjct: 67  VSVFDRTMIAAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD   ++K+  K  + +ED V   E+D+QK+TD+ IK +D     K+KE+M F
Sbjct: 127 AIRNVRRDANSNVKELEKEKECTEDDVRRSEDDVQKLTDAHIKLVDDVLAAKEKELMEF 185


>gi|218781002|ref|YP_002432320.1| ribosome recycling factor [Desulfatibacillum alkenivorans AK-01]
 gi|226703258|sp|B8FGE3|RRF_DESAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|218762386|gb|ACL04852.1| ribosome recycling factor [Desulfatibacillum alkenivorans AK-01]
          Length = 185

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 120/179 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +++M   I+ L+K ++ +RTGR S SMLD VK++ YG+  P+NQ A V + E R++ 
Sbjct: 7   EEAREKMDKAIAALEKGLLRVRTGRASLSMLDGVKLDYYGTPTPINQAATVAIPESRLIT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD  ++  +E+ I +S+LGLNP  +G+++RI +P  TE+RR  +VK+ +  +E+ KI
Sbjct: 67  IQPWDASVIKDIEKAILKSDLGLNPSNDGKIIRIAIPPLTEDRRKEMVKLVNKMSEEGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD  + +K  +K G  +ED+    ++++QKITD  +K +D    +K+KEI+ F
Sbjct: 127 SVRNIRRDANETIKSMKKDGDIAEDLAFKGQDEVQKITDDFVKKVDDICAQKEKEILEF 185


>gi|269797920|ref|YP_003311820.1| ribosome recycling factor [Veillonella parvula DSM 2008]
 gi|294793662|ref|ZP_06758799.1| ribosome recycling factor [Veillonella sp. 3_1_44]
 gi|269094549|gb|ACZ24540.1| ribosome recycling factor [Veillonella parvula DSM 2008]
 gi|294455232|gb|EFG23604.1| ribosome recycling factor [Veillonella sp. 3_1_44]
          Length = 186

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 82/180 (45%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  +DRM  +I  LK +  ++RTGR S ++LD V V+ YGS  P+NQVAN++V EPRM+
Sbjct: 7   LQQAEDRMNKSIEALKHEFASIRTGRASVALLDKVMVDYYGSPSPINQVANISVPEPRMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK M+ ++E+ I +S+LGLNP  +G  +R+ +P+ TEERR  +VKV H  AE +K
Sbjct: 67  VIAPWDKTMIGAIEKAILQSDLGLNPGNDGAQIRLSIPQLTEERRKEIVKVVHKKAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + LKK  K+   +ED      + IQK+TD+ +K ID     K+K+++  
Sbjct: 127 VAVRNIRRDVNEALKKEEKAKTITEDDAKDGLDQIQKLTDAKVKQIDELKVVKEKDVLEV 186


>gi|90415796|ref|ZP_01223729.1| ribosome recycling factor [marine gamma proteobacterium HTCC2207]
 gi|90332170|gb|EAS47367.1| ribosome recycling factor [marine gamma proteobacterium HTCC2207]
          Length = 185

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 103/178 (57%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
               RM   +  L      +RTGR  PS+LD + V+ YG + PL Q A++ + + R L +
Sbjct: 8   EANTRMTKALEALGNAFNKIRTGRAHPSLLDGIHVDYYGVNTPLAQAASIVIEDARTLSL 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + W+K +V ++E+ I +S+LGLNP   G V+R+P+P  TEE R    K A A AE  +IS
Sbjct: 68  TPWEKSLVPAIEKAILKSDLGLNPTTAGAVIRLPLPSLTEETRKVYGKQAKAEAENGRIS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRN+RRD +  LK   K    SED     +++IQKITDS I  ID     K+K++M  
Sbjct: 128 VRNVRRDVLSSLKALLKDKDISEDEERRGQDEIQKITDSFIARIDEALVAKEKDLMEI 185


>gi|312139239|ref|YP_004006575.1| ribosome recycling factor [Rhodococcus equi 103S]
 gi|311888578|emb|CBH47890.1| ribosome recycling factor [Rhodococcus equi 103S]
          Length = 185

 Score =  239 bits (612), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I+  K D+ ++RTGR +P M + V VE YGS  P+ Q+A++ V EPRM+
Sbjct: 6   LFEAEEKMEKAITVAKDDLGSIRTGRANPGMFNRVVVEYYGSMTPITQLASINVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++   +  +E  I  S+LG+NP  +G ++RI VP+ TEERR   VK A +  E +K
Sbjct: 66  IIKPYEASQLGPIENAIRNSDLGVNPSNDGSIIRISVPQLTEERRREFVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR  MD L + +K G+A ED V   E ++ K T   +  ID   + K+ E+M  
Sbjct: 126 VAIRNVRRKTMDELSRIQKDGEAGEDEVGRAEKELDKTTSRYVSQIDELVKHKEAELMEV 185


>gi|291547840|emb|CBL20948.1| ribosome recycling factor [Ruminococcus sp. SR1/5]
          Length = 183

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +MG T++ L+ ++ T+R GR +P +LD + V+ YG+  PL QVAN++V E RM+
Sbjct: 5   IQVYETKMGKTLNALESELTTIRAGRANPHILDKLTVDYYGAPTPLQQVANISVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  M+ ++E+ I  S+LGLNP  +G+++R+  PE TEERR  LVK      E +K
Sbjct: 65  QIQPWESSMIKAIEKAILCSDLGLNPSNDGKMIRLVFPELTEERRKELVKDVKKKGEGAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D  KK  K    SED +  LE+ IQK+TD  IK +D   E K KEI+  
Sbjct: 125 VAVRNIRRDANDAFKKLAKQ-DVSEDEIKELEDQIQKLTDKYIKEVDKAIENKSKEILTV 183


>gi|121604663|ref|YP_981992.1| ribosome recycling factor [Polaromonas naphthalenivorans CJ2]
 gi|166230814|sp|A1VN43|RRF_POLNA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120593632|gb|ABM37071.1| ribosome recycling factor [Polaromonas naphthalenivorans CJ2]
          Length = 186

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 116/186 (62%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ V   Q    +M  ++   + ++  +RTGR +P +LD V V+ YGS VP++QVANV +
Sbjct: 1   MSIVEIKQQATQKMQQSLESFQHNLTKIRTGRANPGLLDTVHVDYYGSMVPISQVANVAL 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R + VS W+K M A +E+ I +S+LGLNP  +G ++R+P+P  TEERR  L KV  A
Sbjct: 61  LDARTISVSPWEKGMGAKIEKAIRDSDLGLNPASQGDLIRVPMPAMTEERRKELTKVVRA 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+++RN+RRD  D +KK  K   ASED     + +IQK TD  I ++D     K+
Sbjct: 121 EGEHAKVAIRNLRRDANDGVKKLVKDKLASEDDERRSQEEIQKFTDRFIADVDKLVTGKE 180

Query: 181 KEIMHF 186
           ++IM  
Sbjct: 181 QDIMAV 186


>gi|260767822|ref|ZP_05876757.1| ribosome recycling factor [Vibrio furnissii CIP 102972]
 gi|260617331|gb|EEX42515.1| ribosome recycling factor [Vibrio furnissii CIP 102972]
 gi|315179348|gb|ADT86262.1| ribosome recycling factor [Vibrio furnissii NCTC 11218]
          Length = 185

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQ+ANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLQKVRTGRAHPSLLSGLSVEYYGAATPLNQIANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTPKVEKAILMSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     + +IQK+TD  +K ID     K+KE+M  
Sbjct: 127 AVRNIRRDANSDLKALLKDKEISEDDDRKAQEEIQKLTDIAVKRIDDVLAAKEKELMEV 185


>gi|117925140|ref|YP_865757.1| ribosome recycling factor [Magnetococcus sp. MC-1]
 gi|166230797|sp|A0L8Q8|RRF_MAGSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|117608896|gb|ABK44351.1| ribosome recycling factor [Magnetococcus sp. MC-1]
          Length = 185

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 84/180 (46%), Positives = 128/180 (71%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++++ RM  +++ LK ++ T+RTGR S S+LD V V AYGS +PLNQVA++TV E RM+
Sbjct: 6   IKDLEQRMNKSLAALKDELATVRTGRASTSLLDAVMVNAYGSMMPLNQVASMTVPEARMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  WDK  + ++E+ I +++LGLNP  +GQ++R+P+PE TEERR  LVK+ H Y+E  K
Sbjct: 66  NVQPWDKGQLGAIEKAIRDADLGLNPSNDGQIVRVPLPELTEERRKDLVKLVHKYSEACK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRDG++ L+K+ K+ + S+D + + E  +Q+ TD  IK ID     K+ +IM  
Sbjct: 126 IAVRNIRRDGIEGLRKAEKNKEISQDEMHTQEKLVQESTDKFIKLIDEAIVSKEADIMQV 185


>gi|83955546|ref|ZP_00964177.1| ribosome recycling factor [Sulfitobacter sp. NAS-14.1]
 gi|83840190|gb|EAP79365.1| ribosome recycling factor [Sulfitobacter sp. NAS-14.1]
          Length = 187

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 86/185 (46%), Positives = 122/185 (65%), Gaps = 1/185 (0%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++D  +++ RM   I+ L+ +  +LRTGR S SML+ V V+AYGS  P+NQV  V V 
Sbjct: 4   DFMLDTDDLERRMNGAITSLRTEFASLRTGRASASMLEPVMVDAYGSSTPINQVGTVNVP 63

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPRM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y
Sbjct: 64  EPRMVTINVWDKALVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTQLTKVAGQY 123

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE +++S+RNIRRDGMD +KK++  G  SED     E ++Q +T+  I  ID   E K+ 
Sbjct: 124 AESARVSIRNIRRDGMDQIKKAKADG-MSEDDQKVWEGEVQDMTNKFIAQIDEQLESKQA 182

Query: 182 EIMHF 186
           EIM  
Sbjct: 183 EIMQV 187


>gi|126737623|ref|ZP_01753353.1| ribosome recycling factor [Roseobacter sp. SK209-2-6]
 gi|126721016|gb|EBA17720.1| ribosome recycling factor [Roseobacter sp. SK209-2-6]
          Length = 203

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 87/182 (47%), Positives = 125/182 (68%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 23  LDTDDLKRRMEGAMANLKTEFASLRTGRASGSMLEPVMVDAYGSMTPINQVGTVNVPEPR 82

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 83  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAGQYAEH 142

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN+RRDGMD +KK++  G  SED     E ++Q++TD++IK +D+  E K+ EIM
Sbjct: 143 ARVSIRNVRRDGMDQIKKAKADG-MSEDDQKFWEAEVQELTDASIKLVDTALETKQAEIM 201

Query: 185 HF 186
             
Sbjct: 202 QV 203


>gi|261866956|ref|YP_003254878.1| ribosome recycling factor [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412288|gb|ACX81659.1| ribosome recycling factor [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 185

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ +DRM  ++  LK  +  +RTGR  PS+LD ++V+ YGS  PL Q+ANV   + R L 
Sbjct: 7   QDAEDRMEKSLDALKGHIAKIRTGRAQPSLLDAIQVDYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  A  E+ K+
Sbjct: 67  VTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRELIKIVKAEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E  IQK+TDS IK +D    +K+KE++ F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENDQHKAEEVIQKLTDSFIKKVDDVLADKEKELLDF 185


>gi|84500821|ref|ZP_00999056.1| ribosome recycling factor [Oceanicola batsensis HTCC2597]
 gi|84390888|gb|EAQ03306.1| ribosome recycling factor [Oceanicola batsensis HTCC2597]
          Length = 187

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 86/182 (47%), Positives = 124/182 (68%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  +++ RM  T+S L+ +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLQRRMEGTMSNLRTEFASLRTGRASASMLEPVMVDAYGSMTPVNQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTVNVWDKNLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAAQYAES 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++  G  SED     E+++Q +TD+  K +D   E K++EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKAKADG-LSEDDQKFWESEVQDLTDTYTKKVDEALEAKQEEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|83942310|ref|ZP_00954771.1| ribosome recycling factor [Sulfitobacter sp. EE-36]
 gi|83846403|gb|EAP84279.1| ribosome recycling factor [Sulfitobacter sp. EE-36]
          Length = 187

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 85/185 (45%), Positives = 122/185 (65%), Gaps = 1/185 (0%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++D  +++ RM   I+ L+ +  +LRTGR S SML+ V V+AYGS  P+NQV  V V 
Sbjct: 4   DFMLDTDDLERRMNGAIASLRTEFASLRTGRASASMLEPVMVDAYGSSTPINQVGTVNVP 63

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPRM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y
Sbjct: 64  EPRMVTINVWDKALVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTQLTKVAGQY 123

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE +++S+RN+RRDGMD +KK++  G  SED     E ++Q +T+  I  ID   E K+ 
Sbjct: 124 AESARVSIRNVRRDGMDQIKKAKADG-MSEDDQKVWEGEVQDMTNKFIAQIDEQLESKQA 182

Query: 182 EIMHF 186
           EIM  
Sbjct: 183 EIMQV 187


>gi|297617174|ref|YP_003702333.1| ribosome recycling factor [Syntrophothermus lipocalidus DSM 12680]
 gi|297145011|gb|ADI01768.1| ribosome recycling factor [Syntrophothermus lipocalidus DSM 12680]
          Length = 188

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++++ RM  T+  L KD+ +LR GR +P+MLD + VE YG   P+NQ+ N+ V EPRML
Sbjct: 9   VKDVESRMKKTVEHLVKDLASLRAGRANPAMLDKITVEYYGQPTPINQLGNIGVPEPRML 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  +  +E+ I +S+LG+NP  +G V+RI +P  TEERR  +VK+    AE++K
Sbjct: 69  VIQPWDKTAIPEIEKAILKSDLGVNPTNDGNVIRIAIPPLTEERRKEMVKMVRKRAEEAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RR+  D +K + K    SED      ++IQK+TD+TIK+ID   + K+K+IM  
Sbjct: 129 VAVRNLRREANDEIKLAEKEKLISEDEAKKRLDEIQKLTDNTIKDIDKVLQTKEKDIMEV 188


>gi|170077573|ref|YP_001734211.1| ribosome recycling factor [Synechococcus sp. PCC 7002]
 gi|238689043|sp|B1XJ13|RRF_SYNP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169885242|gb|ACA98955.1| ribosome recycling factor [Synechococcus sp. PCC 7002]
          Length = 182

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  +++ M  TI   ++   TLRTGR S S+LD + VE YG+  PL  +A+++  +   +
Sbjct: 3   LSELRENMQKTIEATQRSFNTLRTGRASASLLDRITVEYYGAETPLKSLASISTPDSSTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  ++ VER I  S+LGL P  +G  +R+ +P  T+ERR  LVK A   AE+ K
Sbjct: 63  MIQPFDRGSLSDVERAISMSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +D ++K  K+   SED   SL++DIQK+TD     ID   + K+K+IM  
Sbjct: 123 VALRNIRRDAIDDVRKQEKNSDISEDESRSLQDDIQKVTDEFTTKIDDLLKIKEKDIMTV 182


>gi|291296165|ref|YP_003507563.1| ribosome recycling factor [Meiothermus ruber DSM 1279]
 gi|290471124|gb|ADD28543.1| ribosome recycling factor [Meiothermus ruber DSM 1279]
          Length = 185

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 78/178 (43%), Positives = 112/178 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              +  M  ++  L+  + T+RTGR +P++L+ +KVE YGS +PLNQV  V+  +PR LV
Sbjct: 7   NETRQHMQKSLEALEHHLTTMRTGRANPAILNNIKVEYYGSTMPLNQVGTVSSPDPRTLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WD  M+  +E+ I +S+LGLNP  +G  L I +P  TEERR  LVK    YAE+++I
Sbjct: 67  VQSWDPNMLKEIEKAIRDSDLGLNPTNKGDALYISIPPLTEERRRDLVKSVKQYAEEARI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +VRNIRR+ +D  KK  K    SED +   E +IQKITD  +  ID    +K++EI+ 
Sbjct: 127 AVRNIRREALDKAKKLEKEKHLSEDDIKRAEAEIQKITDEFVHKIDEALHKKEQEILK 184


>gi|217970577|ref|YP_002355811.1| ribosome recycling factor [Thauera sp. MZ1T]
 gi|217507904|gb|ACK54915.1| ribosome recycling factor [Thauera sp. MZ1T]
          Length = 185

 Score =  239 bits (611), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +NI+ +M  ++  LK D+  +RTGR    +LD V VE YGS VP+NQVAN+T+++ R + 
Sbjct: 7   KNIEQKMLKSVEALKTDLAKVRTGRAHTGLLDHVMVEYYGSMVPVNQVANITLIDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M+  VER I +S+LGLNP   G++LR+P+P  TEERR  L KV     E +K+
Sbjct: 67  VQTWEKPMLGKVERAIRDSDLGLNPANMGELLRVPMPALTEERRRDLTKVVRHEGETAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRDG   LK + K    SED     E++IQK+TD  +  ID    +K++E+M  
Sbjct: 127 AIRNLRRDGNQQLKDAVKDKAISEDDERRGEDEIQKLTDRYVAEIDKLLAQKEQELMQI 185


>gi|157962701|ref|YP_001502735.1| ribosome recycling factor [Shewanella pealeana ATCC 700345]
 gi|189044076|sp|A8H6L3|RRF_SHEPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157847701|gb|ABV88200.1| ribosome recycling factor [Shewanella pealeana ATCC 700345]
          Length = 185

 Score =  239 bits (610), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + + RM   +   K  M  +RTGR  PS+LD ++V  YGS  PL QVA+V++ + R L 
Sbjct: 7   SDAQTRMDKCVESTKTQMAKVRTGRAHPSLLDTIQVPYYGSLTPLKQVASVSIGDARTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VSV+D+ M+A+VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KV  A AE  +I
Sbjct: 67  VSVFDRTMIAAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD   ++K+  K  + +ED V   E+D+QK+TD+ IK ID     K+KE+M F
Sbjct: 127 AIRNVRRDANSNVKELEKEKECTEDDVRRSEDDVQKLTDAHIKLIDEILAAKEKELMEF 185


>gi|68536249|ref|YP_250954.1| ribosome recycling factor [Corynebacterium jeikeium K411]
 gi|260578949|ref|ZP_05846852.1| ribosome recycling factor [Corynebacterium jeikeium ATCC 43734]
 gi|123650872|sp|Q4JV21|RRF_CORJK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|68263848|emb|CAI37336.1| frr [Corynebacterium jeikeium K411]
 gi|258602923|gb|EEW16197.1| ribosome recycling factor [Corynebacterium jeikeium ATCC 43734]
          Length = 185

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM  ++   ++D+ T+RTGR +PSM + V  E YG   P+ Q+A ++V EPRML
Sbjct: 6   LLESEERMTSSVEHAREDLTTIRTGRANPSMFNGVVAEYYGVPTPITQMATISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +++  + ++E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VKVA +  E +K
Sbjct: 66  LIKPYEQSTMDAIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKEMVKVAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR GM+ L K +K G+A ED V + E D++KIT S ++ +DS  E K+KE++  
Sbjct: 126 IAIRNIRRKGMEQLGKIQKDGEAGEDEVRAAEKDLEKITHSYVEQVDSLVEAKEKELLEV 185


>gi|145295926|ref|YP_001138747.1| ribosome recycling factor [Corynebacterium glutamicum R]
 gi|166230782|sp|A4QF29|RRF_CORGB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|140845846|dbj|BAF54845.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 185

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM  T+   ++D+ T+RTGR +P+M + V  E YG   P+ Q+++++V EPRML
Sbjct: 6   LFEAEERMTATVEHTREDLTTIRTGRANPAMFNGVMAEYYGVPTPITQMSSISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++   +  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A    E  K
Sbjct: 66  LIKPYEMSSMQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDMVKLAKGKGEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR GMD LKK +K G A ED V + E ++ K+T   +  +D     K+KE+M  
Sbjct: 126 IAIRNIRRKGMDQLKKLQKDGDAGEDEVQAAEKELDKVTAGFVAQVDEVVARKEKELMEV 185


>gi|259415740|ref|ZP_05739660.1| ribosome recycling factor [Silicibacter sp. TrichCH4B]
 gi|259347179|gb|EEW58956.1| ribosome recycling factor [Silicibacter sp. TrichCH4B]
          Length = 187

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 89/188 (47%), Positives = 125/188 (66%), Gaps = 3/188 (1%)

Query: 1   MNQVIDLQ--NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M++  +L   ++K RM   ++ LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V
Sbjct: 1   MSEEFELDTDDLKRRMDGAMANLKTEFASLRTGRASASMLEPVMVDAYGSQTPINQVGTV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
            V EPRM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA
Sbjct: 61  NVPEPRMVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
             YAE +++SVRN+RRDGMD +KK++  G  SED     E ++Q +TD  IK +D+  E 
Sbjct: 121 GQYAEHARVSVRNVRRDGMDQIKKAKSEG-MSEDDQKFWEAEVQDLTDKMIKAVDAALET 179

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 180 KQAEIMQV 187


>gi|237747788|ref|ZP_04578268.1| ribosome recycling factor [Oxalobacter formigenes OXCC13]
 gi|229379150|gb|EEO29241.1| ribosome recycling factor [Oxalobacter formigenes OXCC13]
          Length = 186

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  +I  LK D+  +RTGR    +LD V+V+ YGS   ++QVAN+T+L+ R + 
Sbjct: 8   KSAEQKMNKSIESLKADLAKVRTGRAHTGILDHVEVDYYGSPTKISQVANITLLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV ++E+ I +S+LGLNP   G+++R+P P  TEERR  +VK+     E +K+
Sbjct: 68  VQPWEKKMVNAIEKAIRDSDLGLNPSTMGEIIRVPTPALTEERRKEMVKLVKTEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + +KK  K  + SED     ++DIQK+TD  ++ ID    +K+KE+M  
Sbjct: 128 AVRNIRRDANEAVKKMVKDKECSEDDERRSQDDIQKLTDKFVQQIDKLLADKEKEVMTV 186


>gi|225437014|ref|XP_002272648.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 280

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +++K+RM  TI  ++ +  ++RTGR +P++LD V+VE YG+ V L  +A ++  +   L+
Sbjct: 102 KDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLL 161

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  +  +E+ I  S+LGL P  +G+V+R+ +P+ T ERR  L KV     E+ K+
Sbjct: 162 VQPYDKSSLKVIEKAIVSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKV 221

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +   +K  K  K SED V  L +D+QK+ D  +K I++ +++K+KE++  
Sbjct: 222 ALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELLKV 280


>gi|254510739|ref|ZP_05122806.1| ribosome recycling factor [Rhodobacteraceae bacterium KLH11]
 gi|221534450|gb|EEE37438.1| ribosome recycling factor [Rhodobacteraceae bacterium KLH11]
          Length = 187

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 87/182 (47%), Positives = 125/182 (68%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ L+ +  +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMANLRTEFASLRTGRASASMLEPVMVDAYGSMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTVNVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAGQYAES 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN+RRDGMD +KK++  G  SED     E+++Q++TD+ IK++D   E K+ EIM
Sbjct: 127 ARVSIRNVRRDGMDQIKKAKADG-MSEDDQKFWESEVQELTDAMIKSVDEALETKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|311105986|ref|YP_003978839.1| ribosome recycling factor [Achromobacter xylosoxidans A8]
 gi|310760675|gb|ADP16124.1| ribosome recycling factor [Achromobacter xylosoxidans A8]
          Length = 186

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  LK ++  +RTGR    +LD V+VE YGS VP++QV NV +++ R + 
Sbjct: 8   KSAEARMAKSLDTLKTNLAKIRTGRAHTGILDHVQVEYYGSPVPISQVGNVNLVDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K M A++E+ I ES+LGLNP+  G  +R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPYEKSMAAAIEKAIRESDLGLNPMSMGDTIRVPMPALTEERRRDLTKVVRSEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RR+  + LKK  K  + SED     ++D+QK+TD ++  ID    +K+ EIM  
Sbjct: 128 AVRNLRREANEALKKLVKDKEISEDDERRSQDDVQKLTDRSVAEIDKMVTQKEAEIMTV 186


>gi|299134998|ref|ZP_07028189.1| ribosome recycling factor [Afipia sp. 1NLS2]
 gi|298589975|gb|EFI50179.1| ribosome recycling factor [Afipia sp. 1NLS2]
          Length = 187

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 96/182 (52%), Positives = 126/182 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+ ++K RM      LK ++  LRTGR + SM++ V+VEAYGSH+PLNQVA V+V EPR
Sbjct: 6   FDINDLKRRMDGAKDSLKHELGGLRTGRAAISMVEPVQVEAYGSHMPLNQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE  I  SNLGLNP  EGQV+R+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMVKAVETAIVNSNLGLNPATEGQVIRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K++VR++RRDG+D +KK  K  + SED       +IQK+TD+ I +ID     K+KEI+
Sbjct: 126 AKVAVRHVRRDGLDIVKKLEKDRQMSEDDQERASGEIQKVTDAAIADIDKLLATKEKEIL 185

Query: 185 HF 186
             
Sbjct: 186 TV 187


>gi|310816031|ref|YP_003963995.1| ribosome recycling factor [Ketogulonicigenium vulgare Y25]
 gi|308754766|gb|ADO42695.1| ribosome recycling factor [Ketogulonicigenium vulgare Y25]
          Length = 187

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 82/182 (45%), Positives = 122/182 (67%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++  RM   I+ L+ +  +LRTGR S SML+ + V+AYG   P+NQ+  + V EPR
Sbjct: 7   LDTDDLTRRMDGAIAALRTEFASLRTGRASGSMLEPIVVDAYGQTTPINQLGTINVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK MV+ VE+ I +S LG+NP   G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGMVSKVEKAIRDSGLGINPQTNGTIIMLPIPELNEERRRELTKVAAGYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMD +KK++  G  SED V   E+++Q++TD  IK +D   + K+ EIM
Sbjct: 127 ARVAVRNLRRDGMDKIKKAKSDG-LSEDDVKFWESEVQELTDKFIKLVDQTLDTKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|145628296|ref|ZP_01784097.1| ribosome recycling factor [Haemophilus influenzae 22.1-21]
 gi|145638390|ref|ZP_01794000.1| ribosome recycling factor [Haemophilus influenzae PittII]
 gi|144980071|gb|EDJ89730.1| ribosome recycling factor [Haemophilus influenzae 22.1-21]
 gi|145272719|gb|EDK12626.1| ribosome recycling factor [Haemophilus influenzae PittII]
 gi|309751530|gb|ADO81514.1| Ribosome releasing factor [Haemophilus influenzae R2866]
          Length = 185

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ K+
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E +IQKITD  IK +D    +K+KE+M F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEVLTDKEKELMDF 185


>gi|162147934|ref|YP_001602395.1| ribosome recycling factor [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542552|ref|YP_002274781.1| ribosome recycling factor [Gluconacetobacter diazotrophicus PAl 5]
 gi|189044057|sp|A9HKW6|RRF_GLUDA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|161786511|emb|CAP56093.1| Ribosome recycling factor [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530229|gb|ACI50166.1| ribosome recycling factor [Gluconacetobacter diazotrophicus PAl 5]
          Length = 188

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 84/180 (46%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++  RM   +  L++D   LR+GR SP++++ V+VEAYG  VPL QV ++ V E RML
Sbjct: 9   LDDLTRRMDGALESLRRDFAGLRSGRASPALIEPVRVEAYGGEVPLTQVGSIAVPEARML 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWD+ +V +VER I +S LGLNP  +GQ +R+P+P+ TEERR  L + A  Y+E +K
Sbjct: 69  TVQVWDRSLVGAVERAIRDSGLGLNPAADGQTVRVPIPQLTEERRGELARTAGKYSENAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VR +RRDGMD  K   K G  S+D V    + IQK+TD  +K ID    EK++EI   
Sbjct: 129 IAVRGVRRDGMDQTKAQEKKGDISQDDVKVWSDAIQKLTDQYVKRIDEMLAEKEREIKQV 188


>gi|33152634|ref|NP_873987.1| ribosome recycling factor [Haemophilus ducreyi 35000HP]
 gi|38372405|sp|Q7VL83|RRF_HAEDU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33148858|gb|AAP96376.1| ribosome recycling factor [Haemophilus ducreyi 35000HP]
          Length = 185

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL QVANV   + R L 
Sbjct: 7   KDTQQRMEKSLEALKSHISKIRTGRAQPSLLDGIQVEYYGSATPLRQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ KI
Sbjct: 67  VNVFDRSLISAVEKAILTSDLGLNPSSAGATIRVPLPALTEERRRDLIKIVKNEGEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SED     +++IQKITD  +K +D     K+KE++ F
Sbjct: 127 AIRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDGYVKKVDEVLMAKEKELLDF 185


>gi|302389812|ref|YP_003825633.1| ribosome recycling factor [Thermosediminibacter oceani DSM 16646]
 gi|302200440|gb|ADL08010.1| ribosome recycling factor [Thermosediminibacter oceani DSM 16646]
          Length = 185

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 120/179 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  ++RM   +  LK ++  +R GR S ++L+ V V+ YG   P+NQVA V+V EPRM++
Sbjct: 7   KETEERMKKVLGNLKSELAAIRAGRASTALLEKVFVDYYGVPTPVNQVATVSVPEPRMIL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD +M++++E+ I +S+LGL P  +G+V+R+ +PE T ERR  LVK+A   AE +K+
Sbjct: 67  IQPWDVKMLSAIEKAILKSDLGLTPTSDGKVIRLILPELTSERRKELVKMAKKKAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            VRNIRRD  + +KK  K+G+ SED     + +IQK+TD+ I+ ID  F  K+KEIM  
Sbjct: 127 LVRNIRRDANELVKKMEKNGEISEDDSKRSQEEIQKLTDNYIEEIDKAFTNKEKEIMEV 185


>gi|300783895|ref|YP_003764186.1| ribosome recycling factor [Amycolatopsis mediterranei U32]
 gi|299793409|gb|ADJ43784.1| ribosome recycling factor [Amycolatopsis mediterranei U32]
          Length = 187

 Score =  239 bits (610), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  K ++ ++RTGR S +M   + VE YGS  PLNQ+A+V V E RM 
Sbjct: 8   LLDAEEKMEKAVSVAKDELQSVRTGRASSAMFSRIVVEYYGSPTPLNQLASVNVPEARMA 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  + ++E+ I ES+LG+NP  +GQV+RI +P+ TEERR  +VKVA    E ++
Sbjct: 68  LIKPYDQSQLNAIEKAIRESDLGVNPSNDGQVIRIVIPQLTEERRKEMVKVAKGKGEDAR 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R+IRR   D L +  K G+A ED VA  E ++Q +TD+ +  +D   + K+ E++  
Sbjct: 128 VSIRSIRRKAKDELDRIAKDGEAGEDDVARAEKELQNLTDTYVHKVDELIKHKEAELLEV 187


>gi|327480157|gb|AEA83467.1| ribosome recycling factor [Pseudomonas stutzeri DSM 4166]
          Length = 185

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  T+  L      +RTGR  PS+LD V V  YG+  PL QVANV   + R L 
Sbjct: 7   QDAQERMKKTLEALDHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE +++
Sbjct: 67  LTVFDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRKGYTKQARAEAENARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LK   K  + SED     ++D+QK+TD  +  ID   E K+ ++M  
Sbjct: 127 AVRNIRRDAIAQLKDLVKEKEISEDEERRGQDDVQKLTDKYVAEIDKALEGKEADLMAV 185


>gi|315633607|ref|ZP_07888897.1| ribosome recycling factor [Aggregatibacter segnis ATCC 33393]
 gi|315477649|gb|EFU68391.1| ribosome recycling factor [Aggregatibacter segnis ATCC 33393]
          Length = 185

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  LK  +  +RTGR  PS+LD ++V+ YGS  PL Q+ANV   + R L 
Sbjct: 7   KDAQDRMEKSLEALKGHIAKIRTGRAQPSLLDAIQVDYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++ +VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  +  E+ K+
Sbjct: 67  VTVFDRSLIQAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKSEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E +IQ+ITD  IK +D    EK+KE++ F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENDQHKAETEIQQITDKFIKKVDEVLAEKEKELLDF 185


>gi|71907375|ref|YP_284962.1| ribosome recycling factor [Dechloromonas aromatica RCB]
 gi|71846996|gb|AAZ46492.1| ribosome recycling factor [Dechloromonas aromatica RCB]
          Length = 198

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  L+ D+  +RTGR    +LD V+V+ YGS VP+NQVANVT+++ R + 
Sbjct: 20  KTAEGKMQKSLEALRLDLQKVRTGRAHTGLLDHVQVDYYGSMVPVNQVANVTLVDARTIG 79

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M+  VE+ I + +LGLNP  +G ++R+P+P  TEERR  ++K+     E  K+
Sbjct: 80  VQPWEKGMLQKVEKAIRDCDLGLNPASQGDLIRVPMPALTEERRKEMIKIVRTEGEGVKV 139

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD + HLK + K G+  ED     ++D+QK+TD  I  +D     K+ E+M  
Sbjct: 140 AIRNLRRDAITHLKDALKKGEIPEDDERKAQDDVQKLTDRYIVEVDKMLATKEAELMQV 198


>gi|74316806|ref|YP_314546.1| ribosome recycling factor [Thiobacillus denitrificans ATCC 25259]
 gi|123612166|sp|Q3SKN6|RRF_THIDA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|74056301|gb|AAZ96741.1| ribosome recycling factor [Thiobacillus denitrificans ATCC 25259]
          Length = 189

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + +MG T+  LK D+  +RTGR    +LD V V+ YG+  P+ QVANV++++ R L 
Sbjct: 11  QSAEQKMGKTLEALKNDLAKVRTGRAHAGILDHVLVDYYGNPTPVPQVANVSLVDSRTLG 70

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K MV  +E+ I + +LGLNP   G V+R+P+P  TEERR  L+KV    AE +++
Sbjct: 71  VQPYEKNMVGKIEKAIRDGDLGLNPATHGDVIRVPMPALTEERRRDLIKVVRNEAEGARV 130

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K+  A+ED     ++++QK+TD  I  ID    EK+K+++  
Sbjct: 131 AVRNIRRDANASLKDMVKAKTATEDEERRTQDEVQKLTDKFIGEIDKMLAEKEKDLLAV 189


>gi|91775880|ref|YP_545636.1| ribosome recycling factor [Methylobacillus flagellatus KT]
 gi|123254405|sp|Q1H142|RRF_METFK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91709867|gb|ABE49795.1| ribosome recycling factor [Methylobacillus flagellatus KT]
          Length = 185

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              + +M  +I  LK D+  +RTGR    +LD V+VE YGS V +NQVA+V++ + R L 
Sbjct: 7   NTAEQKMQKSIEALKADLSKVRTGRAHTGLLDHVQVEYYGSMVAINQVASVSLGDARTLN 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K M   VE+ I +++LGLNP   G ++R+P+P  TEERR  LVKV  + AE +K+
Sbjct: 67  VQAYEKNMTPKVEKAIRDADLGLNPATNGDIIRVPMPMLTEERRRDLVKVVRSEAENAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D LKK  K  + SED     ++++QK+TD  +  ID   + K+ E+M  
Sbjct: 127 AIRNVRRDANDALKKLVKDKEISEDDERRAQDEVQKLTDKFVAEIDKLLQTKEAELMAV 185


>gi|83951884|ref|ZP_00960616.1| ribosome recycling factor [Roseovarius nubinhibens ISM]
 gi|83836890|gb|EAP76187.1| ribosome recycling factor [Roseovarius nubinhibens ISM]
          Length = 187

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 82/182 (45%), Positives = 119/182 (65%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++  ++  RM   ++ L+ +  +LRTGR S SML+ V V+AYG   P+NQV  V V EPR
Sbjct: 7   LNTDDLTRRMDGAMASLRTEFASLRTGRASASMLEPVMVDAYGQQTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVNKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVASQYAES 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++  G  SED     E  +Q++TDS I  +D   E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKAKADG-MSEDDQKFWETSVQELTDSFIAKVDEALEHKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|293374703|ref|ZP_06621011.1| ribosome recycling factor [Turicibacter sanguinis PC909]
 gi|325840609|ref|ZP_08167090.1| ribosome recycling factor [Turicibacter sp. HGF1]
 gi|292646617|gb|EFF64619.1| ribosome recycling factor [Turicibacter sanguinis PC909]
 gi|325490258|gb|EGC92591.1| ribosome recycling factor [Turicibacter sp. HGF1]
          Length = 185

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 83/180 (46%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N + RM   I  LK++   LRTGR S ++LD ++V+ YG   P+NQ+A VTV EPR L
Sbjct: 6   LSNAEARMSKAIDSLKREFSVLRTGRASGALLDNIQVDYYGMPSPINQMAQVTVPEPRQL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +DK M+ ++ER I+E+N+GL P  +G+V+R+ VP  TEERR  L K    +AE +K
Sbjct: 66  VVKPYDKSMLQAIERAINEANIGLTPNNDGEVIRLNVPALTEERRRELAKKVKGFAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRD  D LKK +K+G+ +ED +     D+QK+TD  IK +D+  +EK+K+IM  
Sbjct: 126 VAIRNVRRDANDELKKLQKNGEITEDALKGYTEDVQKLTDKKIKEVDATADEKEKDIMSI 185


>gi|319407371|emb|CBI81022.1| Ribosome recycling factor [Bartonella sp. 1-1C]
          Length = 186

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 99/186 (53%), Positives = 130/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+  + + ++K RM   IS  K ++ +LRTGR S S+L+ + VEAYGS VP+NQVANV+V
Sbjct: 1   MDITLIMDDLKRRMEGAISSFKHELGSLRTGRASASLLEHLTVEAYGSVVPINQVANVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+A+ 
Sbjct: 61  PESRMLSVSVWDKTMVGAVERAIRDSGLGLNPITDGVNLRIPLPELNEERRKELVKIAYQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E+++I+ R++RRDGMD+LKK  K GK  +D   SL   +QK+TD+TI  ID     K+
Sbjct: 121 YTEQARIAARHVRRDGMDNLKKLEKEGKIGQDEARSLSEKVQKLTDTTIAEIDKILVLKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 TEIMQV 186


>gi|149915215|ref|ZP_01903743.1| ribosome recycling factor [Roseobacter sp. AzwK-3b]
 gi|149810936|gb|EDM70775.1| ribosome recycling factor [Roseobacter sp. AzwK-3b]
          Length = 189

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 82/188 (43%), Positives = 120/188 (63%), Gaps = 3/188 (1%)

Query: 1   MNQVIDLQ--NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M +  +L   +++ RM   +  LK +  +LRTGR S S+L+ V V+AYG   P+NQV  V
Sbjct: 3   MAEEFELDTGDLQRRMEGAMGALKTEFASLRTGRASASILEPVMVDAYGQRTPINQVGTV 62

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
            V E RM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA
Sbjct: 63  NVPESRMVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRKELTKVA 122

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
             YAE ++++VRN+RRDGMD +KK++  G  SED     E+++Q +T+  I  +D   E 
Sbjct: 123 AQYAEHARVAVRNVRRDGMDQIKKAKADG-MSEDDQKFWESEVQDLTNKFIAQVDEALET 181

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 182 KQAEIMQV 189


>gi|288958464|ref|YP_003448805.1| ribosome recycling factor [Azospirillum sp. B510]
 gi|288910772|dbj|BAI72261.1| ribosome recycling factor [Azospirillum sp. B510]
          Length = 185

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 86/181 (47%), Positives = 125/181 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL ++K RM   +   +K++  LRTGR S ++L+ V VEAYGS + L +VA V+V EPR+
Sbjct: 5   DLSDLKRRMEGALDSFRKELGGLRTGRASSNLLEPVMVEAYGSRMHLREVATVSVPEPRL 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V VWD+ M  +VE+ I +S LGLNP  EGQV+R+P+P+ T+ERR  L KVAH YAE+ 
Sbjct: 65  ISVQVWDRGMTKAVEKAIRDSGLGLNPQAEGQVIRVPLPDLTQERRAELAKVAHKYAEQC 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++++RNIRRDGMD LKK+ K+ + ++D      + +Q +TD  IK +D    +K+KEIM 
Sbjct: 125 RVAIRNIRRDGMDGLKKAEKASEITQDEHKVQADKVQVLTDQHIKLVDDSLAQKEKEIMQ 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|229824123|ref|ZP_04450192.1| hypothetical protein GCWU000282_01427 [Catonella morbi ATCC 51271]
 gi|229786477|gb|EEP22591.1| hypothetical protein GCWU000282_01427 [Catonella morbi ATCC 51271]
          Length = 191

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K RM  T+   ++++ ++R GR + S+LD + VE YG   PLNQ+A++T+ E RML
Sbjct: 12  IKDTKQRMQKTVDAYQRELGSIRAGRANASILDRISVEYYGVPTPLNQLASITIPEARML 71

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+ I  S++G+ P  +G V+R+ +P  T+ERR  L K      E +K
Sbjct: 72  LITPYDKGTLGDIEKAILMSDVGITPSNDGSVVRLVIPALTQERRQELAKTVGKEQEGAK 131

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           + VRNIRRD +DH KK+ K+ + +ED +  LE DIQK+TD  +K I+    EK+KEI+ 
Sbjct: 132 VRVRNIRRDAIDHAKKAEKNKEITEDDLKGLEKDIQKLTDDFVKEIEKLTAEKEKEILE 190


>gi|307822433|ref|ZP_07652665.1| ribosome recycling factor [Methylobacter tundripaludum SV96]
 gi|307736999|gb|EFO07844.1| ribosome recycling factor [Methylobacter tundripaludum SV96]
          Length = 185

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 74/177 (41%), Positives = 112/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+   RM  +I  LK +   +RTGR  PS+LD + V  YG+   L+QVAN+ V + R L 
Sbjct: 7   QDASTRMSKSIEALKHEFSKIRTGRAHPSLLDQINVSYYGTESSLSQVANIAVEDARTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K MV ++E+ I +S+LGLNP   G V+RIP+P  TEERR +LVKV    AE  ++
Sbjct: 67  ITPWEKGMVQAIEKAIMKSDLGLNPATNGMVIRIPLPPLTEERRRSLVKVVKNEAENGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRRD    +K++ K    SED   + E  IQK+TD  +K+++   E K+ +++
Sbjct: 127 AIRNIRRDANSAIKEALKEKMISEDEARAAEEKIQKLTDQYVKDVEKLLEAKEADLL 183


>gi|127513560|ref|YP_001094757.1| ribosome recycling factor [Shewanella loihica PV-4]
 gi|166231226|sp|A3QGA0|RRF_SHELP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|126638855|gb|ABO24498.1| ribosome recycling factor [Shewanella loihica PV-4]
          Length = 185

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ K RM   +   K  M  +RTGR  PS+LD +KV  YG+  PL QV NV++ + R L 
Sbjct: 7   EDAKSRMAKCVEATKNQMAKVRTGRAHPSLLDSIKVPYYGTPTPLKQVGNVSIEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D  M+A+VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KV  A AE  +I
Sbjct: 67  ITVFDTTMIAAVEKAIMSSDLGLNPMSAGTTIRIPLPALTEERRKDLIKVVRAEAENGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD    +K   K  + +ED V   E++IQK TD+ IK ID     K+ E+M  
Sbjct: 127 AVRNVRRDANSDVKALEKEKECTEDDVRRTEDEIQKFTDAHIKQIDEILTAKEAELMEV 185


>gi|167854950|ref|ZP_02477725.1| ribosome releasing factor [Haemophilus parasuis 29755]
 gi|219870409|ref|YP_002474784.1| ribosome recycling factor [Haemophilus parasuis SH0165]
 gi|254809514|sp|B8F3D4|RRF_HAEPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167853907|gb|EDS25146.1| ribosome releasing factor [Haemophilus parasuis 29755]
 gi|219690613|gb|ACL31836.1| ribosome recycling factor [Haemophilus parasuis SH0165]
          Length = 185

 Score =  238 bits (609), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+LD ++VE YGS  PL Q+ANV   + R L 
Sbjct: 7   KDTQERMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGSATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ K+
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  D +K   K  + SE+     ++DIQKITD  IK +D    +K+KE+M F
Sbjct: 127 SIRNIRRDANDKIKTLEKEKQISENDERKAQDDIQKITDIYIKKVDEILADKEKELMDF 185


>gi|259907545|ref|YP_002647901.1| ribosome recycling factor [Erwinia pyrifoliae Ep1/96]
 gi|224963167|emb|CAX54651.1| Ribosome recycling factor [Erwinia pyrifoliae Ep1/96]
 gi|283477385|emb|CAY73301.1| frr [Erwinia pyrifoliae DSM 12163]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   K  +  +RTGR SPS+LD + V+ YGS  PL  +A+VTV + R L 
Sbjct: 7   KDAETRMEKCVEAFKNHISKIRTGRASPSILDGIMVDYYGSATPLRLLASVTVEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  INVFDRSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  D LK   K  + SED     + D+QK+TD  IK +D+   +K+ E+M F
Sbjct: 127 SVRNVRRDANDKLKALLKDKEISEDDDRRAQEDVQKMTDIFIKKMDASLADKETELMDF 185


>gi|32400999|gb|AAP80705.1| ribosome recycling factor [Griffithsia japonica]
          Length = 230

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + RM  TI  +K    ++RTGR SPS+LD ++V  YG+  PLN +A V+V     LV
Sbjct: 52  EKSEARMQKTIDSVKSAFNSVRTGRASPSLLDRIQVNYYGADTPLNSLATVSVSGTSTLV 111

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  ++ +ER + ES++GL P  +G  +R+ +P+ T+ERR  LVK   + AE  ++
Sbjct: 112 VEPYDKSCISDIERSLMESDIGLTPNSDGSTIRLSIPQLTKERRSQLVKQVKSMAEDGRV 171

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D +KK  K  +  +D   +L++ +QK+TD  +K I+S +++K+++IM  
Sbjct: 172 AIRNIRRDAVDSIKKLEKKSELGKDESKTLQDRVQKLTDKYVKTIESVYKQKEEDIMKV 230


>gi|54026099|ref|YP_120341.1| ribosome recycling factor [Nocardia farcinica IFM 10152]
 gi|60390236|sp|Q5YS64|RRF_NOCFA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|54017607|dbj|BAD58977.1| putative ribosome recycling factor [Nocardia farcinica IFM 10152]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  K D+ T+RTGR +P M   V V+ YGS  P+ Q++++TV EPRM+
Sbjct: 6   LFDAEEKMEKAVSVAKDDLGTIRTGRANPGMFARVVVDYYGSPTPVTQMSSITVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP   G +LRI +P+ TEERR  LVK A    E +K
Sbjct: 66  VIKPYEAGQLGAIETAIRNSDLGVNPTNNGDILRITIPQLTEERRRELVKQAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR  MD L + +K G+A ED V   E ++ K T   +  ID   + K+ E++  
Sbjct: 126 VAIRNVRRKAMDELARIQKDGEAGEDEVGRAEKELDKTTAKYVSQIDELVKHKEAELLEV 185


>gi|85703599|ref|ZP_01034703.1| ribosome recycling factor [Roseovarius sp. 217]
 gi|85672527|gb|EAQ27384.1| ribosome recycling factor [Roseovarius sp. 217]
          Length = 187

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 84/182 (46%), Positives = 121/182 (66%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  +++ RM   +S LK +  +LRTGR S SML+ + V+AYG   P+NQV  V V EPR
Sbjct: 7   IDTGDLERRMEGAMSALKTEFASLRTGRASASMLEPIMVDAYGQKTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  E+RR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEQRRKELTKVAAQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VRN+RRDGMD +KK++  G  SED     E ++Q +TD  IK++D   + K+ EIM
Sbjct: 127 ARVAVRNVRRDGMDQIKKAKADG-MSEDDQKFWEGEVQSLTDRFIKHVDEVLDGKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|92112699|ref|YP_572627.1| ribosome recycling factor [Chromohalobacter salexigens DSM 3043]
 gi|122420714|sp|Q1R030|RRF_CHRSD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91795789|gb|ABE57928.1| ribosome recycling factor [Chromohalobacter salexigens DSM 3043]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM  ++  L  +   +RTGR  PS+LD V VE YGS +PLNQVA+V V + R L 
Sbjct: 7   KDADARMKKSVEALNANFHKIRTGRAHPSLLDAVTVEYYGSEMPLNQVASVNVEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K MV  VE+ I  S+LGLNP   G V+R+P+P  TEE R   +K A   AE +++
Sbjct: 67  VVPWEKSMVPKVEKAIMTSDLGLNPAAAGNVIRVPLPPLTEETRRNYIKQARGEAENARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD    LK   K  + +ED      ++IQK+TD  +  ID   E K+ +++  
Sbjct: 127 AVRNVRRDANGDLKSLLKEKEITEDEERHAIDEIQKLTDKYVTEIDKLLETKEHDLLQV 185


>gi|19553226|ref|NP_601228.1| ribosome recycling factor [Corynebacterium glutamicum ATCC 13032]
 gi|62390862|ref|YP_226264.1| ribosome recycling factor [Corynebacterium glutamicum ATCC 13032]
 gi|24418653|sp|Q8NP03|RRF_CORGL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21324793|dbj|BAB99416.1| Ribosome recycling factor [Corynebacterium glutamicum ATCC 13032]
 gi|41326201|emb|CAF20363.1| RIBOSOME RECYCLING FACTOR [Corynebacterium glutamicum ATCC 13032]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM  T+   ++D+ T+RTGR +P+M + V  E YG   P+ Q++ +TV EPRML
Sbjct: 6   LFEAEERMTATVEHTREDLTTIRTGRANPAMFNGVMAEYYGVPTPITQMSGITVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++   +  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A    E  K
Sbjct: 66  LIKPYEMSSMQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDMVKLAKGKGEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR GMD LKK +K G A ED V + E ++ K+T   +  +D     K+KE+M  
Sbjct: 126 IAIRNIRRKGMDQLKKLQKDGDAGEDEVQAAEKELDKVTAGFVAQVDEVVARKEKELMEV 185


>gi|296284729|ref|ZP_06862727.1| ribosome recycling factor [Citromicrobium bathyomarinum JL354]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 94/180 (52%), Positives = 124/180 (68%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  +I+ RM   +  LK D+  LRTGR + S+LD V VE YGS +PLNQVA V+  EPR
Sbjct: 4   YDKSDIERRMQGAVESLKGDLAGLRTGRANTSLLDPVVVEVYGSMMPLNQVATVSAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V VWDK  V++VE+GI  +NLGLNP+ +GQ LRIP+P+ TEERR  L KVA  Y E 
Sbjct: 64  MLSVQVWDKGNVSAVEKGIAHANLGLNPMQDGQTLRIPMPDLTEERRKDLAKVADKYGES 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +KI++RN+RRDGM+ LK+  K    SED     E+++QK+TD  + + D+  E KKKEI+
Sbjct: 124 AKIAIRNVRRDGMEALKEDEKKKDISEDDRKRSEDEVQKLTDKYVADTDTAVEHKKKEIL 183


>gi|332705597|ref|ZP_08425673.1| ribosome recycling factor [Lyngbya majuscula 3L]
 gi|332355389|gb|EGJ34853.1| ribosome recycling factor [Lyngbya majuscula 3L]
          Length = 182

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++  M   +   ++   T+RTGR S S+LD V VE YG+  PL  +AN+   +   +
Sbjct: 3   LADVETSMQKAVEATQRAFNTIRTGRASTSLLDRVMVEYYGTPTPLKSLANINTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK M++ +E+ I  S+L L P   G+V+R+ +P  T ERR   VK+A  +AE+ +
Sbjct: 63  TIQPYDKSMLSQIEKAITLSDLDLPPNNNGEVVRLNIPPLTSERRKEFVKMASKFAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD +D ++K  K+ + SED    L+++IQK+T+   K +D  F  K+K+IM  
Sbjct: 123 VSIRNIRRDAVDSVRKQDKNKEISEDESRDLQDEIQKLTNKYTKKVDEVFAAKEKDIMTV 182


>gi|283798096|ref|ZP_06347249.1| ribosome recycling factor [Clostridium sp. M62/1]
 gi|291074241|gb|EFE11605.1| ribosome recycling factor [Clostridium sp. M62/1]
 gi|295091732|emb|CBK77839.1| ribosome recycling factor [Clostridium cf. saccharolyticum K10]
          Length = 184

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 75/176 (42%), Positives = 110/176 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M  +   L  +  ++R GR +P +LD ++V+ YG+  PL QVAN++V EPRM+ +  
Sbjct: 9   EEKMDKSYDALLNEFSSIRAGRANPHVLDKLRVDYYGAPTPLQQVANISVPEPRMIQIQP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K +V ++E+ I  S+LG+NP  +G V+R+  PE TEERR  L K      E +K++VR
Sbjct: 69  WEKSLVKAIEKAILTSDLGINPTNDGSVIRLIFPELTEERRKELAKDVKKKGEGAKVAVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD  D  KK  K+ + SED ++  E  IQK+TD  I  ID   E K KEIM  
Sbjct: 129 NIRRDANDTFKKMEKANEISEDDLSDAEEKIQKMTDKMIDKIDKAVETKTKEIMTV 184


>gi|310659006|ref|YP_003936727.1| ribosome recycling factor [Clostridium sticklandii DSM 519]
 gi|308825784|emb|CBH21822.1| ribosome recycling factor [Clostridium sticklandii]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++++M  TI+ LK +++T+R GR +P+MLD V V+ YG+  PL Q+A V+  EPR ++
Sbjct: 7   KKLEEKMEKTIAVLKDELLTIRAGRANPNMLDRVMVDYYGTMTPLKQMAGVSSPEPRTIL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  + S+E+ I  S+LG NP  +G  +RI +P+ TEERR  L+K+     E++K+
Sbjct: 67  IQPWDKSAMGSIEKAILSSDLGFNPTNDGNSIRINIPQLTEERRKDLIKLVAKTGEQAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN RR+  + +KK  K+ + +ED     ++++QK+TDS IK ID    +K+K+IM  
Sbjct: 127 AIRNERREANEAIKKMEKTSELTEDDSKKAQDEVQKLTDSHIKMIDDMLAKKEKDIMEV 185


>gi|329769638|ref|ZP_08261042.1| ribosome-recycling factor [Gemella sanguinis M325]
 gi|328838393|gb|EGF88002.1| ribosome-recycling factor [Gemella sanguinis M325]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 121/186 (65%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M + I + N+ +RM   I+ L++++ ++R G+ S S+LD + V+ YG   P+NQVA ++V
Sbjct: 1   MPEQI-MNNLNERMEKAIANLRRELASIRAGKASASVLDRLTVDYYGVATPINQVAGISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP+MLV+S ++K ++  +E+ I  S+LGLNP  +G V+RI  P  TEERR  L K+   
Sbjct: 60  PEPKMLVISPYEKTLLGDIEKAIQASDLGLNPANDGTVIRIVFPALTEERRKELAKLVGK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E +K++VRN+RRD MD +KK  K+ + +ED +    +DIQK TD  +  ID   +EK+
Sbjct: 120 ESEGAKVAVRNVRRDAMDSMKKLEKASQITEDDLKGYSDDIQKATDKYVAEIDKVTKEKQ 179

Query: 181 KEIMHF 186
            E+M  
Sbjct: 180 DELMSV 185


>gi|317406265|gb|EFV86509.1| frr protein [Achromobacter xylosoxidans C54]
          Length = 186

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  LK ++  +RTGR    +LD V+VE YGS VP++QV NV +++ R + 
Sbjct: 8   KSAEARMAKSLDTLKTNLAKIRTGRAHTGILDHVQVEYYGSPVPISQVGNVNLIDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K M A++E+ I ES+LGLNP+  G  +R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPYEKSMAAAIEKAIRESDLGLNPMSMGDSIRVPMPALTEERRRDLTKVVRSEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RR+  + LKK  K  + SED     ++D+QK+TD ++ +ID    +K+ EIM  
Sbjct: 128 AVRNLRREANEGLKKLVKDKEISEDDERRAQDDVQKLTDRSVADIDKMVTQKEAEIMTV 186


>gi|331084701|ref|ZP_08333789.1| ribosome-recycling factor [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330410795|gb|EGG90217.1| ribosome-recycling factor [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 183

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 78/186 (41%), Positives = 116/186 (62%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+ +++    ++M  + + L  ++ T+R GR +P +LD + V+ YGS  P+ QVANV+V
Sbjct: 1   MNERLNV--FNEKMEKSYNSLTSELATIRAGRANPHVLDKLTVDYYGSPTPIQQVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+K MV  +E+ I  S++G+NP  +G V+R+  PE TEERR  LVK    
Sbjct: 59  PEARMIQIQPWEKSMVKEIEKAILTSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  K++VRNIRRDG D  KK  K  + SED +  LE+++QK+TD  I  I+   E K 
Sbjct: 119 KGEAGKVAVRNIRRDGNDTFKKL-KGTEVSEDEIKDLEDELQKLTDKYIAQIEKAVEAKS 177

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 178 KEVMTV 183


>gi|163747132|ref|ZP_02154488.1| ribosome recycling factor [Oceanibulbus indolifex HEL-45]
 gi|161379693|gb|EDQ04106.1| ribosome recycling factor [Oceanibulbus indolifex HEL-45]
          Length = 188

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 86/183 (46%), Positives = 120/183 (65%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +++ RM   I+ L+ +  +LRTGR S SML+ V VEAYG   P+NQV  V V EP
Sbjct: 6   MLDTDDLERRMNGAIASLRTEFASLRTGRGSASMLEPVMVEAYGQMTPVNQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE
Sbjct: 66  RMVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTQLTKVAGQYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++S+RNIRRDGMD +KK++  G  SED     E ++Q +T+  I  ID   E K+ EI
Sbjct: 126 HARVSIRNIRRDGMDQIKKAKNDGAMSEDDQKIWEGEVQDLTNRFITLIDDQLETKQAEI 185

Query: 184 MHF 186
           M  
Sbjct: 186 MQV 188


>gi|319899040|ref|YP_004159133.1| Ribosome recycling factor [Bartonella clarridgeiae 73]
 gi|319403004|emb|CBI76559.1| Ribosome recycling factor [Bartonella clarridgeiae 73]
          Length = 186

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 98/186 (52%), Positives = 129/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+  + + ++K RM   IS  + ++ +LRTGR S S+L+ + VEAYGS VP+NQVAN++V
Sbjct: 1   MDITLIMDDLKRRMEGAISSFRHELGSLRTGRASASLLEHLTVEAYGSVVPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK M+  VER I +S LGLNPI EG  LRIP+PE  EERR  LVK+AH 
Sbjct: 61  PESRMLSVSVWDKTMIGVVERAIRDSGLGLNPITEGMNLRIPLPELNEERRKELVKIAHQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+++IS R++RRDGMD+LKK  K G+  +D   SL   +QK+TD T+  ID     K+
Sbjct: 121 YAEQARISARHVRRDGMDNLKKLEKEGEIGQDEARSLSEKVQKLTDETVAEIDKILVLKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 TEIMQV 186


>gi|332994201|gb|AEF04256.1| ribosome recycling factor [Alteromonas sp. SN2]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 114/186 (61%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I+L + ++RM  +IS LK     +RTGR  PS+LD + V  YG+  PL QVANV  
Sbjct: 1   MIDEIEL-DAQERMDKSISALKGQFSKIRTGRAHPSLLDGIMVPYYGTDTPLKQVANVIA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L ++V+DK  + +VE+ I +++LGLNP+  G  +RIP+P  TEERR  L++V   
Sbjct: 60  EDSRTLALTVFDKSAIQAVEKAIMQADLGLNPMSAGGSIRIPLPPLTEERRKDLIRVVRN 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  ++S+RNIRRD    +K+  K  + SED   + E +IQ +T+  IK +D     K+
Sbjct: 120 EAENGRVSIRNIRRDANSDVKELLKEKEISEDESRAAEENIQSLTNDFIKKVDGMLAVKE 179

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 180 KELMEV 185


>gi|257094441|ref|YP_003168082.1| ribosome recycling factor [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046965|gb|ACV36153.1| ribosome recycling factor [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 186

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  L+ D+  +RTGR    +LD V+VE YGS VP+N VANVT+++ R L 
Sbjct: 8   KTTERKMEKSLEALRTDLAKVRTGRAHTGLLDHVQVEYYGSLVPINTVANVTLIDARTLG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M   VE+ I + +LGLNP  +G+++R+P+P  TE RR  L+KV  A AE +K+
Sbjct: 68  VQPWEKGMAGKVEKAIRDCDLGLNPASQGELIRVPMPPLTEARRRDLIKVVRAEAEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD    LK+  K+   SED     +++IQK+TD  +  ID     K+ E+M  
Sbjct: 128 AVRNLRRDANATLKEMLKNKACSEDEEHRAQDEIQKLTDRYVVEIDKQLSHKETELMAI 186


>gi|258406064|ref|YP_003198806.1| ribosome recycling factor [Desulfohalobium retbaense DSM 5692]
 gi|257798291|gb|ACV69228.1| ribosome recycling factor [Desulfohalobium retbaense DSM 5692]
          Length = 184

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
             + K RM   I+ L+K+   LRTGR S S++D ++V  Y +  PLNQ+A++++ + R +
Sbjct: 5   FTDAKKRMEKAITNLEKEFSRLRTGRASASLVDGIQVSYYNTPTPLNQLASISIPDARTI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+    ++E+ I +S+LGLNP+ +G+++RI +P  TEERR  LVK+A  + E +K
Sbjct: 65  AIQPWDRSSFENIEKAIMQSDLGLNPVNDGKIIRINIPALTEERRKELVKIAKKHTEDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  + LKK +     SED +   +  IQK+TD  +   +    EK+KEIM  
Sbjct: 125 IAIRNIRRDANEELKKQKNDKTISEDDMHRGQEKIQKLTDEFVDKAEKTLTEKEKEIMEI 184


>gi|167646764|ref|YP_001684427.1| ribosome recycling factor [Caulobacter sp. K31]
 gi|189044048|sp|B0SZ18|RRF_CAUSK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167349194|gb|ABZ71929.1| ribosome recycling factor [Caulobacter sp. K31]
          Length = 188

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 93/180 (51%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KDRM   +  LK+D   LRTGR S  +LD + V AYGS V LN VA+++V EPR +
Sbjct: 9   LTRYKDRMDKAVLSLKEDFAGLRTGRASSGLLDQIMVNAYGSMVQLNTVASISVPEPRQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V++WDK +V++VE+ I  S+LGLNP+VEG  LRIP+P  TEERR  LVK+A  YAE  K
Sbjct: 69  NVNIWDKGVVSAVEKAIRNSDLGLNPVVEGNNLRIPIPPLTEERRKDLVKIAGKYAEAQK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK+ K+   SED +  +E ++QKITD  IK +D   + K++EIM  
Sbjct: 129 VAVRNIRRDANDDLKKAEKASVISEDELKKMETEVQKITDGAIKQVDEALKTKEQEIMQV 188


>gi|114764271|ref|ZP_01443499.1| ribosome recycling factor [Pelagibaca bermudensis HTCC2601]
 gi|114543219|gb|EAU46236.1| ribosome recycling factor [Roseovarius sp. HTCC2601]
          Length = 187

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 87/188 (46%), Positives = 127/188 (67%), Gaps = 3/188 (1%)

Query: 1   MNQVIDLQ--NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M++  +L   ++K RM   ++ L+ +  +LRTGR S SML+ V+VEAYG   P+NQV  V
Sbjct: 1   MSEDFELDTDDLKRRMDGAMANLRTEFASLRTGRASASMLEPVQVEAYGQMTPINQVGTV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
            V EPRM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA
Sbjct: 61  NVPEPRMVTINVWDKGLVNKVEKAIRESGLGINPQMNGTIIMLPIPELNEERRRELGKVA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
             YAE ++++VRN+RRDGMD +KK++  G  SED     E ++Q++TD+ IK +D   E 
Sbjct: 121 GQYAEHARVAVRNVRRDGMDQIKKAKADG-MSEDDQKFWETEVQELTDAYIKKVDQSLET 179

Query: 179 KKKEIMHF 186
           K++EIM  
Sbjct: 180 KQEEIMQV 187


>gi|149907550|ref|ZP_01896297.1| ribosome releasing factor [Moritella sp. PE36]
 gi|149809220|gb|EDM69149.1| ribosome releasing factor [Moritella sp. PE36]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 78/186 (41%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ D  + + RMG +I  LK  +  +RTGR  PS+L+ + V  YG++ PLNQV NV  
Sbjct: 2   INEIKD--DAQARMGKSIDALKSQLSKVRTGRAHPSILNGITVSYYGTNTPLNQVGNVGT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L ++V+D  MV +VE+ I  S+LGLNP   G  +RIP+P  TEERR +L+KV  A
Sbjct: 60  EDSRTLSITVFDATMVKAVEKAIMMSDLGLNPQSAGTNIRIPLPALTEERRKSLIKVVRA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++++RNIRRD    +K   K  +  ED     +++IQK+TD+ IK ID+   +K+
Sbjct: 120 DAEQGRVAIRNIRRDANGDIKALLKEKEIGEDDDRRAQDEIQKMTDTCIKQIDTILSDKE 179

Query: 181 KEIMHF 186
           K++M  
Sbjct: 180 KDLMEV 185


>gi|307152127|ref|YP_003887511.1| ribosome recycling factor [Cyanothece sp. PCC 7822]
 gi|306982355|gb|ADN14236.1| ribosome recycling factor [Cyanothece sp. PCC 7822]
          Length = 182

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 70/177 (39%), Positives = 111/177 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  +++ M  TI   ++   T+RTGR + S+LD V VE YG+  PL  +AN+T  +   +
Sbjct: 3   LAEVQENMQKTIEATQRSFNTIRTGRANASLLDRVTVEYYGTETPLKSLANITTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  +  +E+ I  S++GL P  +GQ++R+ +P  T +RR  LVK+A   AE+ K
Sbjct: 63  AIQPYDRSSLGKIEKAIQMSDVGLTPNNDGQIIRLNIPPLTSDRRKELVKLAGKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VRNIRRD +D ++K  KS + SED   +L++DIQKITD     ID   + K+K+I
Sbjct: 123 VAVRNIRRDAIDAIRKQEKSHEISEDEARNLQDDIQKITDEYNAKIDELLKAKEKDI 179


>gi|148261537|ref|YP_001235664.1| ribosome recycling factor [Acidiphilium cryptum JF-5]
 gi|326405026|ref|YP_004285108.1| ribosome-recycling factor [Acidiphilium multivorum AIU301]
 gi|166230404|sp|A5G1L3|RRF_ACICJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146403218|gb|ABQ31745.1| ribosome recycling factor [Acidiphilium cryptum JF-5]
 gi|325051888|dbj|BAJ82226.1| ribosome-recycling factor [Acidiphilium multivorum AIU301]
          Length = 188

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 85/188 (45%), Positives = 121/188 (64%), Gaps = 2/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M+  +D  L +++ RM   +  LK++   LRTGR +P++LD VKVEAYG+ +PLNQVA V
Sbjct: 1   MDADLDTLLADLQRRMDGAMETLKREFSGLRTGRANPALLDPVKVEAYGTLMPLNQVATV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
            V E RML V VWD+ MV +    I +  LGLNP  +GQ++R+P+P  TEERR  L + A
Sbjct: 61  AVPESRMLTVQVWDRGMVNATVAAIRDCGLGLNPQPDGQLIRVPLPLLTEERRNELARAA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
             YAE ++++VR +RRDGM+ +K   K  +  ED      + +QK+TD+TIK ID    E
Sbjct: 121 GKYAEGARVAVRGVRRDGMETIKGFEKKHQIGEDQGRDWADRVQKLTDATIKKIDELLVE 180

Query: 179 KKKEIMHF 186
           K+K+I   
Sbjct: 181 KEKDIRQV 188


>gi|254488037|ref|ZP_05101242.1| ribosome recycling factor [Roseobacter sp. GAI101]
 gi|214044906|gb|EEB85544.1| ribosome recycling factor [Roseobacter sp. GAI101]
          Length = 187

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 85/183 (46%), Positives = 122/183 (66%), Gaps = 1/183 (0%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D  +++ RM   I+ L+ +  +LRTGR S SMLD + V+AYG+  P+NQV  V V EP
Sbjct: 6   MLDTDDLERRMDGAIASLRTEFASLRTGRGSASMLDPIMVDAYGTKTPINQVGTVNVPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           RM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR +L KVA  YAE
Sbjct: 66  RMVTINVWDKSLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTSLTKVAGQYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++S+RNIRRDGMD +KK++  G  SED     E ++Q +T+  I  ID   E K+ EI
Sbjct: 126 HARVSIRNIRRDGMDQIKKAKADG-MSEDDQKVWEGEVQDMTNKYIAMIDEQLETKQAEI 184

Query: 184 MHF 186
           M  
Sbjct: 185 MQV 187


>gi|111023540|ref|YP_706512.1| ribosome recycling factor [Rhodococcus jostii RHA1]
 gi|122955102|sp|Q0S282|RRF_RHOSR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110823070|gb|ABG98354.1| ribosome recycling factor [Rhodococcus jostii RHA1]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K D+ ++RTGR +P M + + ++ YG+  P+ Q+A++ V E R++
Sbjct: 6   LFEAEEKMEKAVTVAKDDLGSIRTGRANPGMFNRIGIDYYGAFTPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  ++   + ++E  I  S+LG+NP  +G ++RI VP+ TEERR  LVK A +  E +K
Sbjct: 66  VVKPYEASQLGAIETAIRNSDLGVNPSNDGNLIRISVPQLTEERRRELVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN+RR  MD L + +K G+A ED V   E ++ K T   +  +D   + K+ E++  
Sbjct: 126 VSVRNVRRKAMDELSRIQKDGEAGEDEVGRAEKELDKTTARYVAQVDELVKHKEAELLEV 185


>gi|326388633|ref|ZP_08210226.1| ribosome recycling factor [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326206884|gb|EGD57708.1| ribosome recycling factor [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 85/180 (47%), Positives = 118/180 (65%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  +++ RM   +  L+ D+  LRTGR + ++LD + VE YGS +PLNQVA V+  EPR
Sbjct: 4   YDKADLERRMKGAVDALRHDLSGLRTGRANTALLDPITVEIYGSRMPLNQVATVSAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK  +  VE+ I  + LGLNPI +G  LR+P+P+ TEERR  L K+A  YAEK
Sbjct: 64  LLSVQVWDKSSIGPVEKAIRSAGLGLNPINDGNTLRLPIPDLTEERRKELAKLASQYAEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++I++RN+RRDGM+ LK      + SED     E ++QK+TD  IK  D    EK+KEI+
Sbjct: 124 ARIAIRNVRRDGMEALKADEAKKEISEDERKRAETEVQKLTDEIIKAADEAASEKEKEIL 183


>gi|329912033|ref|ZP_08275644.1| Ribosome recycling factor [Oxalobacteraceae bacterium IMCC9480]
 gi|327545756|gb|EGF30890.1| Ribosome recycling factor [Oxalobacteraceae bacterium IMCC9480]
          Length = 186

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N   RM  +I  LK D+  +RTGR    MLD + V+ YG+   L QVANVT+++ R L 
Sbjct: 8   KNTDVRMHKSIETLKTDLAKVRTGRAHVGMLDHIMVDYYGNPTQLTQVANVTLVDARTLG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV+ VE+ I +++LGLNP  +G ++R+P P  TEERR  +VK+  + AE +KI
Sbjct: 68  VQPWEKKMVSVVEKAIRDADLGLNPSTQGDLIRVPTPALTEERRKEMVKLVKSEAEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  + LKK  K  + SED     +++IQK+TD  +  ID    +K+KE++  
Sbjct: 128 AIRNIRRDANEGLKKLIKDKECSEDDERRAQDEIQKMTDKFVAEIDKLVVDKEKEVLTV 186


>gi|241764760|ref|ZP_04762769.1| ribosome recycling factor [Acidovorax delafieldii 2AN]
 gi|241365750|gb|EER60422.1| ribosome recycling factor [Acidovorax delafieldii 2AN]
          Length = 186

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  +I+  K ++  +RTGR +P++LD V VE YGS VPL+QVANV +L+ R + 
Sbjct: 8   KTAETKMDQSIAAFKNNLQKIRTGRANPALLDTVHVEYYGSPVPLSQVANVALLDSRTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E +KI
Sbjct: 68  VQPWEKGMGAKIEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGESAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + +KK  K   ASED     E D+QK TD  I  ID+    K++EIM  
Sbjct: 128 AVRNLRRDANESVKKLVKDKLASEDDQKRAETDVQKFTDKHIAEIDALVAAKEQEIMAV 186


>gi|317495174|ref|ZP_07953544.1| ribosome recycling protein [Gemella moribillum M424]
 gi|316914596|gb|EFV36072.1| ribosome recycling protein [Gemella moribillum M424]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 122/186 (65%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M + I + N+ +RM   I+ L++++ ++R G+ S ++LD + V+ YG   P+NQVA V+V
Sbjct: 1   MPEQI-MNNLNERMEKAIASLRRELASIRAGKASAAVLDRLTVDYYGVATPINQVAGVSV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP+MLV+S ++K ++  +ER I  S+LGLNP  +G V+RI  P  TEERR  L K+   
Sbjct: 60  PEPKMLVISPYEKTLLGDIERAIQASDLGLNPSNDGSVIRIVFPALTEERRKELAKLVGK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E +K++VRN+RRD +D +KK  K+ + +ED +    +DIQK+TD  +  ID   +EK+
Sbjct: 120 ESEGAKVAVRNVRRDAIDAMKKLEKASQITEDDLKGYSDDIQKVTDKFVAEIDKVTKEKQ 179

Query: 181 KEIMHF 186
            E+M  
Sbjct: 180 DELMSV 185


>gi|326316576|ref|YP_004234248.1| ribosome recycling factor [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373412|gb|ADX45681.1| ribosome recycling factor [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 186

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I   K ++  +RTGR +P++LD V+VE YGS VPL+QVANV++++ R + 
Sbjct: 8   KNTEAKMDQSIVAFKNNLAKIRTGRANPALLDSVQVEYYGSMVPLSQVANVSLIDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E +K+
Sbjct: 68  VQPWEKGMGAKIEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + +KK  K   ASED     E DIQK+TD  I  +D+    K++EIM  
Sbjct: 128 AVRNLRRDANESVKKLVKDKLASEDEQKRAEADIQKVTDKHIAEVDALVAAKEQEIMAV 186


>gi|325673456|ref|ZP_08153147.1| ribosome recycling factor [Rhodococcus equi ATCC 33707]
 gi|325555477|gb|EGD25148.1| ribosome recycling factor [Rhodococcus equi ATCC 33707]
          Length = 185

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I+  K D+ ++RTGR +P M + V VE YGS  P+ Q+A++ V E RM+
Sbjct: 6   LFEAEEKMEKAITVAKDDLGSIRTGRANPGMFNRVVVEYYGSMTPITQLASINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++   +  +E  I  S+LG+NP  +G ++RI VP+ TEERR   VK A +  E +K
Sbjct: 66  IIKPYEASQLGPIENAIRNSDLGVNPSNDGSIIRISVPQLTEERRREFVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR  MD L + +K G+A ED V   E ++ K T   +  ID   + K+ E+M  
Sbjct: 126 VAIRNVRRKTMDELSRIQKDGEAGEDEVGRAEKELDKTTSRYVSQIDELVKHKEAELMEV 185


>gi|329889359|ref|ZP_08267702.1| ribosome recycling factor [Brevundimonas diminuta ATCC 11568]
 gi|328844660|gb|EGF94224.1| ribosome recycling factor [Brevundimonas diminuta ATCC 11568]
          Length = 185

 Score =  238 bits (607), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 93/181 (51%), Positives = 124/181 (68%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL+  +DRM  +++ LK D   LRTGR +  +L+ V VEAYG+  PL  VA ++V EPRM
Sbjct: 5   DLKTFRDRMDKSVAALKDDYAGLRTGRANAGLLEPVVVEAYGATSPLTAVAAISVPEPRM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V+VWDK MV SVE+ I  + LGLNP+V+GQ LRIP+P  TEERR  L K+A  YAE  
Sbjct: 65  ISVNVWDKGMVVSVEKAIRSAGLGLNPVVDGQTLRIPIPPLTEERRKDLAKLAGKYAEDK 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           KI+VRN+RRD  D LKK+ K+G+ S+D    +E ++QK TD+ IK ID   + K+ EIM 
Sbjct: 125 KIAVRNVRRDANDELKKAEKAGEISQDEQKKMEAEVQKDTDAAIKRIDETLKAKEVEIMQ 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|54310081|ref|YP_131101.1| ribosome recycling factor [Photobacterium profundum SS9]
 gi|60390707|sp|Q6LN27|RRF_PHOPR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|46914520|emb|CAG21299.1| putative ribosome recycling factor [Photobacterium profundum SS9]
          Length = 185

 Score =  238 bits (607), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + ++RMG ++  LK  ++ +RTGR  PS+LD + VE YG++ PL Q+ANV   + R L 
Sbjct: 7   NDAQERMGKSVDALKNQLVKIRTGRAHPSLLDTIYVEYYGANTPLKQLANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   +E+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE+ ++
Sbjct: 67  ITVFDRELTPKIEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRKEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD  +KNI++  E K+KE+M  
Sbjct: 127 AIRNIRRDANADLKALLKDKEISEDDDRRAQDEIQKLTDVAVKNIEAVLEVKEKELMEV 185


>gi|119946594|ref|YP_944274.1| ribosome recycling factor [Psychromonas ingrahamii 37]
 gi|166231213|sp|A1SYW0|RRF_PSYIN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119865198|gb|ABM04675.1| ribosome recycling factor [Psychromonas ingrahamii 37]
          Length = 185

 Score =  238 bits (607), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + + RM  ++   +  +  +RTGR  PS+LD + V  YGS+ PL QV NV+  + R L 
Sbjct: 7   SDAQSRMDKSVEAFRSQLSKIRTGRAHPSLLDGIMVPYYGSNTPLRQVGNVSTEDARTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D  ++ +VE+ I  S+LGLNP+  G V+RIP+P  TEERR  L+K+    AE S+I
Sbjct: 67  VTVFDASLIKAVEKAIMGSSLGLNPMSAGTVIRIPLPPLTEERRRDLIKIVRGEAENSRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  + LK   K    SED     E  +QK T+  IK I+     K+ E++  
Sbjct: 127 AIRNIRRDANNDLKLLEKDKDISEDEQRVGEELVQKTTNDHIKQIEDLLVVKEAELLEV 185


>gi|78222467|ref|YP_384214.1| ribosome recycling factor [Geobacter metallireducens GS-15]
 gi|123572206|sp|Q39W85|RRF_GEOMG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78193722|gb|ABB31489.1| ribosome recycling factor [Geobacter metallireducens GS-15]
          Length = 185

 Score =  238 bits (607), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + ++K  M  ++  L+++   +RTGR +  +LD +KVE YG+  PL+QVA ++V EPR +
Sbjct: 6   IADMKAHMEKSVDALRREYQKVRTGRATTGLLDDIKVEYYGNPSPLSQVATLSVPEPRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+ +++  +E+ I  +NLG  P  +G+ +RI +P  TEERR  +VK     AE +K
Sbjct: 66  TIQPWEAKLIPVIEKAIMNANLGFTPANDGKTIRISLPPLTEERRKEIVKTLKKMAEDTK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRDG+D LKK  K  K SED +   E ++Q +T++ +  ++     K+KE++  
Sbjct: 126 VAVRNIRRDGIDSLKKLEKDKKISEDDLKRAEKEVQDVTNTFVAKVEEVLTHKEKEVLEV 185


>gi|33592520|ref|NP_880164.1| ribosome recycling factor [Bordetella pertussis Tohama I]
 gi|33596177|ref|NP_883820.1| ribosome recycling factor [Bordetella parapertussis 12822]
 gi|33601585|ref|NP_889145.1| ribosome recycling factor [Bordetella bronchiseptica RB50]
 gi|39932121|sp|Q7VYC7|RRF_BORPE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39932131|sp|Q7WA57|RRF_BORPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39932138|sp|Q7WJ91|RRF_BORBR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33572166|emb|CAE41712.1| ribosome recycling factor [Bordetella pertussis Tohama I]
 gi|33573180|emb|CAE36832.1| ribosome recycling factor [Bordetella parapertussis]
 gi|33576021|emb|CAE33101.1| ribosome recycling factor [Bordetella bronchiseptica RB50]
 gi|332381938|gb|AEE66785.1| ribosome recycling factor [Bordetella pertussis CS]
          Length = 186

 Score =  238 bits (607), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  LK  +  +RTGR    +LD V+VE YGS VP++QVANV +++ R + 
Sbjct: 8   KSAETRMAKSLETLKASLAKIRTGRAHTGILDHVQVEYYGSPVPISQVANVNLVDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K M   +E+ I ES+LGLNP+  G+ +R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPYEKSMAGPIEKAIRESDLGLNPVSMGETIRVPMPALTEERRRDLTKVVKSEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RR+  + LKK  K  + SED     ++D+QK+TD  + +ID    +K+ EIM  
Sbjct: 128 AVRNLRREANEALKKLVKDKEISEDDERRAQDDVQKLTDRAVGDIDKMIVQKEAEIMTV 186


>gi|187478231|ref|YP_786255.1| ribosome recycling factor [Bordetella avium 197N]
 gi|123515019|sp|Q2L159|RRF_BORA1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|115422817|emb|CAJ49345.1| ribosome recycling factor [Bordetella avium 197N]
          Length = 186

 Score =  238 bits (607), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + + RM  ++  LK ++  +RTGR    +LD V+VE YGS VP+ QVAN+ +++ R + 
Sbjct: 8   NSAESRMSKSLDTLKVNLSKIRTGRAHAGILDHVQVEYYGSPVPVGQVANLNLVDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K M   +ER I +S+LGLNP+  G  +R+P+P  TEERR  L KV  +  E +K+
Sbjct: 68  VQPYEKHMAGPIERAIRDSDLGLNPVSLGDTIRVPMPALTEERRRDLTKVVRSEGEDAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RR+  + LKK  K    SED     ++++QK+TD  + +ID    +K+ EIM  
Sbjct: 128 AVRNLRREANEALKKLVKDKIISEDDERRGQDEVQKLTDRAVADIDKMVTQKEAEIMTV 186


>gi|296085196|emb|CBI28691.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  238 bits (607), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +++K+RM  TI  ++ +  ++RTGR +P++LD V+VE YG+ V L  +A ++  +   L+
Sbjct: 96  KDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLL 155

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  +  +E+ I  S+LGL P  +G+V+R+ +P+ T ERR  L KV     E+ K+
Sbjct: 156 VQPYDKSSLKVIEKAIVSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKV 215

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +   +K  K  K SED V  L +D+QK+ D  +K I++ +++K+KE++  
Sbjct: 216 ALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELLKV 274


>gi|149186826|ref|ZP_01865136.1| ribosome recycling factor [Erythrobacter sp. SD-21]
 gi|148829493|gb|EDL47934.1| ribosome recycling factor [Erythrobacter sp. SD-21]
          Length = 185

 Score =  238 bits (607), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 92/180 (51%), Positives = 125/180 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  +I+ RM   I  LK D+  LRTGR + S+LD V VE YGS +PLNQVA V+  EPR
Sbjct: 4   YDKSDIERRMKGAIESLKGDLSGLRTGRANTSLLDPVVVEVYGSMMPLNQVATVSAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V VWDK  V +VE+GI ++NLGLNP+++GQ +R+P+P+ TEERR  L K+A  YAE+
Sbjct: 64  MLSVQVWDKANVTAVEKGIAKANLGLNPMIDGQNVRLPMPDLTEERRRDLAKLAGQYAEQ 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           SKI++RN+RRDGM+ LK+  K  + SED     E+++QK+TD  +   +     K+KEIM
Sbjct: 124 SKIAIRNVRRDGMEALKEDEKKKEISEDDRKRSEDEVQKLTDKYVAEAEQAASAKEKEIM 183


>gi|294084085|ref|YP_003550843.1| ribosome recycling factor [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663658|gb|ADE38759.1| ribosome recycling factor [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 185

 Score =  238 bits (607), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 88/182 (48%), Positives = 128/182 (70%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D++++K RM    + LK + M LR GR S  ML+ + V+AYGS +P++QV N++  EPR
Sbjct: 4   FDIEDMKRRMEGGFASLKTEFMGLRAGRASTGMLEPIMVDAYGSKMPMSQVGNISAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V+VWD  M ASVE+ I ES+LGLNP+ EG ++R+P+P+ +EERR  +VKVA  YAE 
Sbjct: 64  LLTVTVWDASMTASVEKAIRESDLGLNPMAEGTLIRVPIPDLSEERRKDMVKVAGRYAEA 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDG++ ++K+ K G  SED    LE+DIQK TD  +K ID  F  K+KEI 
Sbjct: 124 ARVAIRNVRRDGIESVRKAEKEGLMSEDERHGLESDIQKTTDEYVKKIDDAFANKEKEIT 183

Query: 185 HF 186
             
Sbjct: 184 QV 185


>gi|261367153|ref|ZP_05980036.1| ribosome recycling factor [Subdoligranulum variabile DSM 15176]
 gi|282571279|gb|EFB76814.1| ribosome recycling factor [Subdoligranulum variabile DSM 15176]
          Length = 184

 Score =  238 bits (607), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 72/176 (40%), Positives = 115/176 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M  ++  L +++ ++R GR +P++LD V V+ YGS  P+NQ+A V+V E R+L ++ 
Sbjct: 9   EEKMNASVDHLVRELASIRAGRANPAVLDRVTVDYYGSPTPINQIAAVSVAEARILTITP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD++M+  + + I  S++G+NPI +GQV+R+  P  TEERR  L K      E++K++VR
Sbjct: 69  WDRQMLKPISKAIQTSDIGINPIDDGQVIRLVFPAPTEERRKQLTKDVQKQGEEAKVAVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRD MD  K  +K+G+ +ED    LE + QK+TD  +K ID     K KEIM  
Sbjct: 129 NVRRDAMDKFKAMKKAGELTEDDQKKLEEETQKLTDKYVKMIDETCAAKNKEIMEV 184


>gi|126729706|ref|ZP_01745519.1| ribosome recycling factor [Sagittula stellata E-37]
 gi|126709825|gb|EBA08878.1| ribosome recycling factor [Sagittula stellata E-37]
          Length = 186

 Score =  238 bits (607), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 85/188 (45%), Positives = 123/188 (65%), Gaps = 4/188 (2%)

Query: 1   MNQVIDLQ--NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M+   +L   ++  RM   +  L+ +  +LRTGR S SML+ + V+AYG+  P+NQV  V
Sbjct: 1   MSDEFELDTDDLTRRMEGAMGSLRTEFASLRTGRASGSMLEPIMVDAYGAMTPINQVGTV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
            V EPRM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA
Sbjct: 61  NVPEPRMVTINVWDKSLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELSKVA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
             YAE +++S+RNIRRDGMD +KK +     SED     E+++Q +TDS IK +D+  E 
Sbjct: 121 GQYAEHARVSIRNIRRDGMDQIKKHKDD--MSEDDAKLWESEVQDLTDSYIKKVDAALET 178

Query: 179 KKKEIMHF 186
           K++EIM  
Sbjct: 179 KQEEIMQV 186


>gi|83647914|ref|YP_436349.1| ribosome recycling factor [Hahella chejuensis KCTC 2396]
 gi|123531340|sp|Q2SBQ0|RRF_HAHCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|83635957|gb|ABC31924.1| ribosome recycling factor [Hahella chejuensis KCTC 2396]
          Length = 185

 Score =  238 bits (607), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  L      +RTGR +P++L+ V V  YG+  PL Q+ANV V + R L 
Sbjct: 7   KQSEQKMKKSMEALGHAFAKIRTGRANPAILESVMVSYYGTDTPLTQIANVVVEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K MV  +E+ I +S+LGLNP   G V+R+P+P  TEE R  LVK A   AE +++
Sbjct: 67  VTPWEKNMVPQIEKAILKSDLGLNPSTAGTVIRVPMPALTEETRKELVKTARGEAENTRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD    +K   K  + SED      +DIQK+TD  I  +D    EK+K++M  
Sbjct: 127 AIRNLRRDANADIKTLLKDKEISEDEEKRGLDDIQKLTDKYIAEVDRVLAEKEKDLMAV 185


>gi|58040244|ref|YP_192208.1| ribosome recycling factor [Gluconobacter oxydans 621H]
 gi|62900775|sp|Q5FPZ4|RRF_GLUOX RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|58002658|gb|AAW61552.1| Ribosome Recycling Factor (RRF) [Gluconobacter oxydans 621H]
          Length = 188

 Score =  238 bits (607), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 87/180 (48%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++  RM   I  L++D+  LR+GR SP++L+ V+VEAYGS VPL+QV ++ V E RML
Sbjct: 9   LADLTRRMDGAIESLRRDLSGLRSGRASPNLLEPVRVEAYGSEVPLSQVGSIAVPEARML 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            VSVWD+ +V +VER I +S LGLNP  +GQ +R+P+P  TEERR  L + A  YAE  K
Sbjct: 69  TVSVWDRTVVGAVERAIRDSGLGLNPSTDGQTVRVPIPALTEERRNELARAASRYAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ISVR +RRDGM+  K   K  + S+D + +  + IQK+TD  IK +D  F +K++EI   
Sbjct: 129 ISVRGVRRDGMEQTKALEKKSEISQDDMKTWTDAIQKLTDQYIKKVDDIFADKEREIKQV 188


>gi|319405841|emb|CBI79473.1| Ribosome recycling factor [Bartonella sp. AR 15-3]
          Length = 186

 Score =  237 bits (606), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 96/186 (51%), Positives = 129/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+  + + ++K RM   IS  K ++ +LRTGR S S+L+ + VEAYGS VP+NQVAN++V
Sbjct: 1   MDITLIMDDLKRRMEGAISSFKHELGSLRTGRASASLLEHLTVEAYGSVVPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK M+ +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+A+ 
Sbjct: 61  PESRMLSVSVWDKTMIGAVERAIRDSGLGLNPITDGMNLRIPLPELNEERRKELVKIAYQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E+++I+ R++RRDGMD+LKK  K G+  +D   SL   +QK+TD TI  ID     K+
Sbjct: 121 YTEQARIAARHVRRDGMDNLKKLEKEGEIGQDEARSLSEKVQKLTDETIAEIDKILLLKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 TEIMQI 186


>gi|299144039|ref|ZP_07037119.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518524|gb|EFI42263.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 185

 Score =  237 bits (606), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +++M  TIS  ++D+ ++R GR +PS+LD + V+ YG   PLNQVA ++  EPR+L 
Sbjct: 7   KDAEEKMKKTISVYREDLQSIRAGRANPSLLDKITVDYYGQATPLNQVAGISAPEPRLLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WD  ++ ++E+ I +S LG+ P  +G+++R+ +P  TEERR  L K+     E +K+
Sbjct: 67  ITPWDASLIPAIEKAILKSELGITPSNDGKIVRLLIPHLTEERRKELTKIVRKNGENAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D +KK  KS + SED     E  IQK+TD  I+ +D   + K+ E+M  
Sbjct: 127 AIRNIRRDSIDEVKKLEKSKEISEDDRKDGEEQIQKLTDKYIEELDKITKSKEDELMEI 185


>gi|326798845|ref|YP_004316664.1| ribosome-recycling factor [Sphingobacterium sp. 21]
 gi|326549609|gb|ADZ77994.1| Ribosome-recycling factor [Sphingobacterium sp. 21]
          Length = 187

 Score =  237 bits (606), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 78/188 (41%), Positives = 119/188 (63%), Gaps = 3/188 (1%)

Query: 1   MNQVIDLQ--NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN +I LQ  +  D M   IS  + ++  +R G+  PSMLD + V+ YG+  PL+QV N+
Sbjct: 1   MNDLIKLQLEDANDSMQKAISHTESELTKIRAGKAMPSMLDGINVDYYGTPTPLSQVGNI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              +PR LV+  W+K +++++ER I +SN+GLNP  +G ++R+ VP  TEERR  LV+  
Sbjct: 61  NTPDPRSLVIQPWEKNLLSAIERAIIDSNIGLNPQNDGNIIRLAVPPLTEERRRELVRKV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AEK K+++RNIR+D  D +KK +  G  SED +   E ++QK+TD+ I  +D   E 
Sbjct: 121 KEEAEKGKVAIRNIRKDANDGIKKLKNDG-VSEDEIKVGEGEVQKLTDNFIAKVDKLAEA 179

Query: 179 KKKEIMHF 186
           K+K+IM  
Sbjct: 180 KEKDIMTV 187


>gi|170727617|ref|YP_001761643.1| ribosome recycling factor [Shewanella woodyi ATCC 51908]
 gi|238688707|sp|B1KNU0|RRF_SHEWM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169812964|gb|ACA87548.1| ribosome recycling factor [Shewanella woodyi ATCC 51908]
          Length = 185

 Score =  237 bits (606), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 115/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   ++ +DRM   +   K  M  +RTGR  PS+LD +KV  YGS  PL QV NV++
Sbjct: 2   LNEI--KKDAQDRMDKCVEATKTQMAKVRTGRAHPSLLDSIKVPYYGSLTPLKQVGNVSI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L +SV+D  M+ +VE+ I  S+LGLNP+  G  +R+P+P  TEERR  L+KV  A
Sbjct: 60  EDSRTLAISVFDSTMIPAVEKAIMSSDLGLNPMSAGATIRVPLPALTEERRKDLIKVVRA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  +I+VRN+RRD    +K   K  + +ED V   E+++QK TD+ IK ID     K+
Sbjct: 120 EAENGRIAVRNVRRDANSDVKALEKEKECTEDDVHRSEDEVQKFTDAHIKLIDEILAAKE 179

Query: 181 KEIMHF 186
            E+M  
Sbjct: 180 AELMEV 185


>gi|221133311|ref|ZP_03559616.1| ribosome recycling factor [Glaciecola sp. HTCC2999]
          Length = 185

 Score =  237 bits (606), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 113/186 (60%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I+L + +DRM  ++S LK  +  +RTGR  PS+LD + V  YG+  PL Q+AN+  
Sbjct: 1   MIDEIEL-DAQDRMEKSVSALKSQLAKIRTGRAHPSLLDSIVVNYYGADTPLKQLANIIA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L +SV+DK  + +VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KVA  
Sbjct: 60  EDSRTLALSVFDKSAIQAVEKAIMSSDLGLNPMSAGGAIRIPLPPLTEERRKDLIKVARG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  +++VRNIRRD    +K   K    SED   + E +IQ +T+  IK +D     K+
Sbjct: 120 EAENGRVAVRNIRRDANSDIKDLLKDKDISEDQARAGEENIQSLTNDFIKQVDELLSVKE 179

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 180 KELMEI 185


>gi|331698487|ref|YP_004334726.1| ribosome-recycling factor [Pseudonocardia dioxanivorans CB1190]
 gi|326953176|gb|AEA26873.1| Ribosome-recycling factor [Pseudonocardia dioxanivorans CB1190]
          Length = 185

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  K D+ ++RTGR +PSM   + V+ YG+  PLNQ+A+V+V E RM 
Sbjct: 6   LFDAEEKMEKAVSVAKDDLASVRTGRATPSMFSRIMVDYYGAMTPLNQLASVSVPEARMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +D   + ++E+ I  S+LG+NP  +GQ++R+ +P+ +EERR  +VKVA    E ++
Sbjct: 66  VVKPYDASQIGALEKAIRNSDLGVNPTNDGQIIRVVIPQLSEERRKEMVKVARGKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R++RR  M+ L +  K G+A ED V   E ++Q  TD  +  +D   + K+ E++  
Sbjct: 126 VTIRSLRRKAMEELHRIVKEGEAGEDEVGRAEKELQGTTDKYVHQVDELVKHKEAELLEV 185


>gi|167037634|ref|YP_001665212.1| ribosome recycling factor [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040295|ref|YP_001663280.1| ribosome recycling factor [Thermoanaerobacter sp. X514]
 gi|256750775|ref|ZP_05491660.1| ribosome recycling factor [Thermoanaerobacter ethanolicus CCSD1]
 gi|300914379|ref|ZP_07131695.1| ribosome recycling factor [Thermoanaerobacter sp. X561]
 gi|307724385|ref|YP_003904136.1| ribosome recycling factor [Thermoanaerobacter sp. X513]
 gi|320116049|ref|YP_004186208.1| ribosome recycling factor [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|238687580|sp|B0K1P6|RRF_THEPX RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238687714|sp|B0K9R3|RRF_THEP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166854535|gb|ABY92944.1| ribosome recycling factor [Thermoanaerobacter sp. X514]
 gi|166856468|gb|ABY94876.1| ribosome recycling factor [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256750358|gb|EEU63377.1| ribosome recycling factor [Thermoanaerobacter ethanolicus CCSD1]
 gi|300889314|gb|EFK84460.1| ribosome recycling factor [Thermoanaerobacter sp. X561]
 gi|307581446|gb|ADN54845.1| ribosome recycling factor [Thermoanaerobacter sp. X513]
 gi|319929140|gb|ADV79825.1| ribosome recycling factor [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 184

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 82/180 (45%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M  ++S LK ++  +R GR +P++LD + V+ YG+  PLN++A +T  EPR+L
Sbjct: 5   LKASEEKMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD   ++ +E+ I +S+LG+NP+ +G+VLR+  PE TEERR  LVK+ H  AE++K
Sbjct: 65  VVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRRD  D +KK  K+G+ SED     E +IQK+TD  IK ID   E K+KEIM  
Sbjct: 125 VAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKVVEAKEKEIMEI 184


>gi|46198814|ref|YP_004481.1| ribosome recycling factor (rrf) [Thermus thermophilus HB27]
 gi|55980827|ref|YP_144124.1| ribosome recycling factor [Thermus thermophilus HB8]
 gi|6831652|sp|Q9WX76|RRF_THET8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390719|sp|Q72KE0|RRF_THET2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|11513707|pdb|1EH1|A Chain A, Ribosome Recycling Factor From Thermus Thermophilus
 gi|157836509|pdb|2V46|Y Chain Y, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 1 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 1.
 gi|157836565|pdb|2V48|Y Chain Y, Structure Of The Ribosome Recycling Factor Bound To The
           Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
           Trna-Fmet (Part 3 Of 4). This File Contains The 30s
           Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
           Molecule 2.
 gi|158429965|pdb|2QBE|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 50s Subunit Of The
           First 70s Ribosome, With Rrf Bound. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|158430018|pdb|2QBG|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Ribosome Recycling
           Factor (Rrf). This File Contains The 50s Subunit Of The
           Second 70s Ribosome, With Rrf Bound. The Entire Crystal
           Structure Contains Two 70s Ribosomes And Is Described In
           Remark 400.
 gi|158430071|pdb|2QBI|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 50s
           Subunit Of The First 70s Ribosome, With Gentamicin And
           Rrf Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158430124|pdb|2QBK|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Gentamicin And Ribosome
           Recycling Factor (Rrf). This File Contains The 50s
           Subunit Of The Second 70s Ribosome, With Gentamicin And
           Rrf Bound. The Entire Crystal Structure Contains Two 70s
           Ribosomes And Is Described In Remark 400.
 gi|158431424|pdb|2Z4L|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           50s Subunit Of The First 70s Ribosome, With Paromomycin
           And Rrf Bound. The Entire Crystal Structure Contains Two
           70s Ribosomes And Is Described In Remark 400.
 gi|158431477|pdb|2Z4N|6 Chain 6, Crystal Structure Of The Bacterial Ribosome From
           Escherichia Coli In Complex With Paromomycin And
           Ribosome Recycling Factor (Rrf). This File Contains The
           50s Subunit Of The Second 70s Ribosome, With Paromomycin
           And Rrf Bound. The Entire Crystal Structure Contains Two
           70s Ribosomes And Is Described In Remark 400.
 gi|4589668|dbj|BAA76865.1| frr [Thermus thermophilus]
 gi|46196437|gb|AAS80854.1| ribosome recycling factor (rrf) [Thermus thermophilus HB27]
 gi|55772240|dbj|BAD70681.1| ribosome recycling factor (Rrf) [Thermus thermophilus HB8]
          Length = 185

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 78/177 (44%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              +  M  ++  L+ ++  LRTGR +P++L  +KVE YG+HVPLNQ+A VT  +PR LV
Sbjct: 8   AETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLV 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WD+  + ++E+ I +S+LGLNP  +G  L I +P  TEERR  LV+    YAE+ ++
Sbjct: 68  VQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRR+ +D LKK  K    SED     E +IQKITD  I   D   E+K++EI+
Sbjct: 128 AIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLAEKKEQEIL 184


>gi|254477526|ref|ZP_05090912.1| ribosome recycling factor [Ruegeria sp. R11]
 gi|214031769|gb|EEB72604.1| ribosome recycling factor [Ruegeria sp. R11]
          Length = 187

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 86/185 (46%), Positives = 124/185 (67%), Gaps = 1/185 (0%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++D  +++ RM   +  LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V V 
Sbjct: 4   DFILDTDDLQRRMDGAMGNLKTEFASLRTGRASASMLEPVMVDAYGSMTPINQVGTVNVP 63

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPRM+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y
Sbjct: 64  EPRMVTVNVWDKALVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELGKVAGQY 123

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE +++++RN+RRDGMD +KK++  G  SED     E ++Q++TD  IK +D+  E K+ 
Sbjct: 124 AESARVAIRNVRRDGMDQIKKAKADG-MSEDDQKLWEGEVQELTDKMIKAVDAALEVKQA 182

Query: 182 EIMHF 186
           EIM  
Sbjct: 183 EIMQV 187


>gi|239908426|ref|YP_002955168.1| ribosome recycling factor [Desulfovibrio magneticus RS-1]
 gi|259494539|sp|C4XMX9|RRF_DESMR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|239798293|dbj|BAH77282.1| ribosome recycling factor [Desulfovibrio magneticus RS-1]
          Length = 184

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +DRM   ++ L K+   LRTGR + S+LD V+V+ YG+   L+Q+A+V   + R +
Sbjct: 5   LKDAEDRMKKALAALDKEFSRLRTGRATTSLLDGVRVDYYGTATQLDQLASVATPDSRTI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++  A +E+ I +S LGL P+ +G+++RI +P  TE+RR  LVKVA  Y E++K
Sbjct: 65  TIQPWDRKAFADIEKAILKSGLGLTPVNDGKIIRISIPPLTEDRRKDLVKVAKKYVEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRD  + LKK +     SED     ++D+QK+TD+ I   D  F +K+KEIM  
Sbjct: 125 VAMRNVRRDANELLKKKKNDKAISEDDQRKGQDDVQKLTDNYIVKTDEAFSKKEKEIMEI 184


>gi|237785749|ref|YP_002906454.1| ribosome recycling factor [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259494536|sp|C4LJA6|RRF_CORK4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|237758661|gb|ACR17911.1| Ribosome recycling factor [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 185

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM  ++ + ++D+ T+RTGR +PSM + V+ E YG   P+ Q+A ++V EPRML
Sbjct: 6   LLESEERMTQSVEYAREDLTTIRTGRANPSMFNGVQAEYYGVMTPITQMATISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++  ++ ++E  I  S+LG+NP  +GQVLR+ VP+ TEERR  +V++A +  E ++
Sbjct: 66  LIKPYEPSIMNAIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRKEMVRLAKSKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR GMD LK+ +K G+A ED V + E ++ K T   +  +D   E K+KE+M  
Sbjct: 126 IAIRNIRRKGMDELKRIQKDGEAGEDEVQAAEKELDKTTHEYVSQVDKLIEAKEKELMEV 185


>gi|260888303|ref|ZP_05899566.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
 gi|330838370|ref|YP_004412950.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
 gi|260861839|gb|EEX76339.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
 gi|329746134|gb|AEB99490.1| ribosome recycling factor [Selenomonas sputigena ATCC 35185]
          Length = 185

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 70/176 (39%), Positives = 115/176 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           ++RM  T+  L++D  +LR GR +P++LD V V+ YG   P++QVA + V EPRML+++ 
Sbjct: 10  EERMKKTLEALRRDFGSLRAGRATPALLDRVMVDYYGQPTPVSQVAAIAVPEPRMLMITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K ++  +E+ I +S+LGL P  +G  +R+ +P+ T+ERR  LVK  +   E +K+++R
Sbjct: 70  WEKTILHDIEKAIMKSDLGLTPNSDGTAVRLSIPQLTQERRTELVKSLNKKTEDAKVAIR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD  + +KK  K+ + +ED     ++D+QK+ D  IK +D     K+KEIM  
Sbjct: 130 NIRRDANEQMKKLEKAKEITEDDAKKGQDDMQKLVDKYIKAVDDARVVKEKEIMEV 185


>gi|225024279|ref|ZP_03713471.1| hypothetical protein EIKCOROL_01154 [Eikenella corrodens ATCC
           23834]
 gi|224943304|gb|EEG24513.1| hypothetical protein EIKCOROL_01154 [Eikenella corrodens ATCC
           23834]
          Length = 185

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 76/176 (43%), Positives = 115/176 (65%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + + +M  ++  L++++  +RTGR    +LD V+VE YGS VP++QVANVT+L+ R + V
Sbjct: 8   SAETKMQRSVEVLRENLAKVRTGRAHTGLLDQVEVEYYGSMVPVSQVANVTLLDARTISV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             ++  M A+VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE  ++S
Sbjct: 68  KPYEGNMAAAVEKAIRDSNLGLNPASMGDLIRVPMPMLTEERRKDLIKVVRGEAEDGRVS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +RN+RRD  DH+KK  K  + SED     E  IQK+TD  I  +D   E K++++M
Sbjct: 128 IRNVRRDANDHIKKLLKDKEVSEDDARRGEEQIQKLTDKYIAEVDKLLEHKEEDLM 183


>gi|322390000|ref|ZP_08063539.1| ribosome recycling factor [Streptococcus parasanguinis ATCC 903]
 gi|321143313|gb|EFX38752.1| ribosome recycling factor [Streptococcus parasanguinis ATCC 903]
          Length = 185

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  T+R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLGREFGTIRAGRANASLLDRIFVEYYGVETPLNQLASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E  I+  +LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LITPFDKSSLKDIEHSINAFDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED +  LE +IQK+TD  +K++D     K+KE+M  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKGLEKEIQKVTDDAVKHVDEMTAHKEKELMEV 185


>gi|307264902|ref|ZP_07546464.1| ribosome recycling factor [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326389448|ref|ZP_08211015.1| ribosome recycling factor [Thermoanaerobacter ethanolicus JW 200]
 gi|306920160|gb|EFN50372.1| ribosome recycling factor [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325994453|gb|EGD52878.1| ribosome recycling factor [Thermoanaerobacter ethanolicus JW 200]
          Length = 184

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 82/180 (45%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M  ++S LK ++  +R GR +P++LD + V+ YG+  PLN++A +T  EPR+L
Sbjct: 5   LKASEEKMQKSLSVLKNELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEPRVL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD   ++ +E+ I +S+LG+NP+ +G+VLR+  PE TEERR  LVK+ H  AE++K
Sbjct: 65  VVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRRD  D +KK  K+G+ SED     E +IQK+TD  IK ID   E K+KEIM  
Sbjct: 125 VAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKAVEAKEKEIMEI 184


>gi|224476382|ref|YP_002633988.1| ribosome recycling factor [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254809530|sp|B9DPH1|RRF_STACT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|222420989|emb|CAL27803.1| putative ribosome recycling factor [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 184

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 83/186 (44%), Positives = 122/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +  L   + RM  +I  L +++ T+  GR + ++L  VKV+ YG+  P+ Q+A++ V
Sbjct: 1   MSDI--LSETRSRMKKSIESLSRELATINAGRANSNLLAGVKVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+LVVS +DK  ++ +ER I+ +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEPRLLVVSPYDKTSLSDIERAINAANLGVNPSSDGEVIRIMVPALTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  D LKK  K G  SED + +  +D+QKITD +IK +D   EEK+
Sbjct: 119 MGENAKVSIRNIRRDSNDDLKKDEKEGVISEDELRTGTDDVQKITDESIKEVDKVLEEKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|20807853|ref|NP_623024.1| ribosome recycling factor [Thermoanaerobacter tengcongensis MB4]
 gi|254479463|ref|ZP_05092790.1| ribosome recycling factor [Carboxydibrachium pacificum DSM 12653]
 gi|22001937|sp|Q8RA24|RRF_THETN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|20516416|gb|AAM24628.1| Ribosome recycling factor [Thermoanaerobacter tengcongensis MB4]
 gi|214034606|gb|EEB75353.1| ribosome recycling factor [Carboxydibrachium pacificum DSM 12653]
          Length = 184

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 83/180 (46%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  T++ LK ++  +R GR +P++LD + V  YG+  PLN++A +T  EPR+L
Sbjct: 5   LKDSEERMKKTLNVLKSELAAIRAGRANPALLDRITVNYYGTPTPLNRLATITAPEPRVL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD   +  +E+ I +S+LG+NP+ +G+VLR+ +PE TEERR  LVK+ H  AE+++
Sbjct: 65  VVQPWDVSQIGEIEKAIQKSDLGINPVSDGKVLRLVLPELTEERRKELVKLVHKKAEEAR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VR IRRD  D +KK  K G+ SED     E +IQK+TD  IK ID   E K+KEIM  
Sbjct: 125 IAVRQIRRDANDLVKKMEKDGEISEDERKRREEEIQKLTDKYIKEIDKMVEAKEKEIMEI 184


>gi|319404368|emb|CBI77971.1| Ribosome recycling factor [Bartonella rochalimae ATCC BAA-1498]
          Length = 186

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 98/186 (52%), Positives = 129/186 (69%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+  + + ++K RM   IS  K ++ +LRTGR S S+L+ + VEAYGS VP+NQVAN++V
Sbjct: 1   MDITLIMDDLKRRMEGAISSFKHELGSLRTGRASASLLEHLTVEAYGSIVPINQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML VSVWDK MV +VER I +S LGLNPI +G  LRIP+PE  EERR  LVK+A+ 
Sbjct: 61  PESRMLSVSVWDKTMVGAVERAIRDSGLGLNPITDGVNLRIPLPELNEERRKELVKIAYQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E+++I+ R++RRDGMD+LKK  K GK  +D   SL   +QK+TD TI  ID     K+
Sbjct: 121 YTEQARIAARHVRRDGMDNLKKLEKEGKIGQDEARSLSEKVQKLTDETIAEIDKILVLKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 TEIMQV 186


>gi|150390448|ref|YP_001320497.1| ribosome recycling factor [Alkaliphilus metalliredigens QYMF]
 gi|166991551|sp|A6TRM0|RRF_ALKMQ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149950310|gb|ABR48838.1| ribosome recycling factor [Alkaliphilus metalliredigens QYMF]
          Length = 185

 Score =  237 bits (606), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++++M  T+  LK D  ++R G+ +PSMLD + V+ YGS  PL QVA+V+  EPR+L+
Sbjct: 7   KRLEEKMTKTLGVLKDDFNSIRAGKANPSMLDRITVDYYGSITPLKQVASVSAPEPRLLI 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D  ++  +E+ +  S+LGLNP  +G+++R+ +P+ TEERR  L KV    AE+ ++
Sbjct: 67  IQPYDPSVINGIEKALMMSDLGLNPSNDGKIIRLNIPQLTEERRKELTKVVKRVAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN RRD  + LKK  K  + +ED +   + ++QKITD   K +D    +K+ EI+  
Sbjct: 127 ALRNGRRDANEQLKKMEKDSELTEDDLKQAQEEVQKITDKFNKQVDEMLVKKELEILEV 185


>gi|90413532|ref|ZP_01221523.1| ribosome releasing factor [Photobacterium profundum 3TCK]
 gi|90325464|gb|EAS41947.1| ribosome releasing factor [Photobacterium profundum 3TCK]
          Length = 185

 Score =  237 bits (606), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + ++RMG ++  LK  ++ +RTGR  PS+LD + VE YG++ PL Q+ANV   + R L 
Sbjct: 7   NDAQERMGKSVDALKNQLVKIRTGRAHPSLLDTIYVEYYGANTPLKQLANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   +E+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+    AE+ ++
Sbjct: 67  ITVFDRELTPKIEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRKEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK   K  + SED     +++IQK+TD  +KNI++  E K+KE+M  
Sbjct: 127 AIRNIRRDANADLKALLKDKEISEDDDRRAQDEIQKLTDIAVKNIEAVLEVKEKELMEV 185


>gi|325579128|ref|ZP_08149084.1| ribosome recycling factor [Haemophilus parainfluenzae ATCC 33392]
 gi|301155649|emb|CBW15117.1| ribosome recycling factor [Haemophilus parainfluenzae T3T1]
 gi|325159363|gb|EGC71497.1| ribosome recycling factor [Haemophilus parainfluenzae ATCC 33392]
          Length = 185

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  ++  L+  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L 
Sbjct: 7   QDAEARMEKSLEALRGHIAKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+ ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+  +  E+ K+
Sbjct: 67  VTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKSEGEQGKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +K   K  + SE+     E  IQK+TDS IK +D    +K+KE+M F
Sbjct: 127 AIRNVRRDANDKIKALLKDKEISENDQHKAEEIIQKVTDSYIKKVDEILADKEKELMDF 185


>gi|148265750|ref|YP_001232456.1| ribosome recycling factor [Geobacter uraniireducens Rf4]
 gi|189044056|sp|A5G7W5|RRF_GEOUR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146399250|gb|ABQ27883.1| ribosome recycling factor [Geobacter uraniireducens Rf4]
          Length = 185

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N+   M  TI  L+K+   +RTGR S  +LD +KV+ YG+  P+NQVA + V EPR +
Sbjct: 6   INNMSTHMDKTIDALRKEYQRVRTGRASTGLLDEIKVDFYGTPSPINQVATLAVPEPRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD +M+  +E+ I  +NLGL P  +G+V+R+ +P  TEERR  +VK     AE +K
Sbjct: 66  TLQPWDAKMIPVIEKAIMNANLGLTPANDGKVIRLNIPPLTEERRKDIVKQLKKLAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD +D LKK  K  K SED +   E ++Q +T+S +  ID  F  K+KE+M  
Sbjct: 126 VAVRNIRRDAIDELKKQEKDKKISEDDLKRAEKEVQDVTNSHVAKIDEVFVHKEKEVMEV 185


>gi|332140473|ref|YP_004426211.1| ribosome recycling factor [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|238693254|sp|B4RVI6|RRF_ALTMD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|327550495|gb|AEA97213.1| ribosome recycling factor [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 185

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 113/186 (60%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I+L + ++RM  ++  LK     +RTGR  PS+LD + V  YG   PL QVANV  
Sbjct: 1   MIDEIEL-DAQERMEKSLVALKGQFSKIRTGRAHPSLLDGIMVPYYGVDTPLKQVANVVA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L ++V+DK  + +VE+ I +S+LGLNP+  G  +RIP+P  TEERR  L++V   
Sbjct: 60  EDSRTLALTVFDKSAIQAVEKAIMQSDLGLNPMSAGGSIRIPLPPLTEERRKDLIRVVRN 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  ++++RNIRRD    +K   K  + SED   + E +IQ IT+  IK +DS   +K+
Sbjct: 120 EAEGGRVAIRNIRRDANGDVKDLLKEKEISEDESRAAEENIQSITNEFIKKVDSLLADKE 179

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 180 KELMEV 185


>gi|256003336|ref|ZP_05428327.1| ribosome recycling factor [Clostridium thermocellum DSM 2360]
 gi|281417721|ref|ZP_06248741.1| ribosome recycling factor [Clostridium thermocellum JW20]
 gi|255992626|gb|EEU02717.1| ribosome recycling factor [Clostridium thermocellum DSM 2360]
 gi|281409123|gb|EFB39381.1| ribosome recycling factor [Clostridium thermocellum JW20]
 gi|316940242|gb|ADU74276.1| ribosome recycling factor [Clostridium thermocellum DSM 1313]
          Length = 183

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 123/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +NI+++M  T+S LK ++ T+R GR + ++LD + V+ YG   P+NQ+  ++V EPR++V
Sbjct: 5   KNIEEKMKKTVSVLKDELNTVRAGRANAAILDRITVDYYGVPTPINQLGTISVPEPRVIV 64

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD +++  +E+ I +S++G+NP  +G+V+R+  P  TEERR  L K+A  Y E +K+
Sbjct: 65  IQPWDAQILKEIEKEIQKSDIGINPNNDGKVIRLVFPPLTEERRKELTKLAKKYGEDAKV 124

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++R+IRRDG++ +K  +K+G+ +ED + S E DIQ +TD  I  ID   E K+KEI+  
Sbjct: 125 AIRSIRRDGIEKMKAMKKNGEITEDDLKSAEKDIQNLTDKYIAEIDKLIEIKEKEILEV 183


>gi|34497654|ref|NP_901869.1| ribosome recycling factor [Chromobacterium violaceum ATCC 12472]
 gi|39932056|sp|Q7NVZ1|RRF_CHRVO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|34103510|gb|AAQ59872.1| ribosome recycling factor [Chromobacterium violaceum ATCC 12472]
          Length = 185

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  T+   K D+  +RTGR    +LD V V+ YGS VP+NQVANVT+++ R + 
Sbjct: 7   KSAEQKMQKTLEAFKNDLAKVRTGRAHTGILDHVMVDYYGSDVPVNQVANVTLIDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M+A +E+ I +S+LGLNP   G+++R+P+P  TEERR  L+KV    AE +++
Sbjct: 67  VQPWEKPMLAKIEKAIRDSDLGLNPASMGEIIRVPMPMLTEERRKDLIKVVRGEAEGARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD     K   K    +ED     +++IQK+TD     ID     K+ +++  
Sbjct: 127 AVRNIRRDSNTEFKNLLKDKAITEDDERRGQDEIQKLTDKYTAEIDKMLATKEADLLAV 185


>gi|226366024|ref|YP_002783807.1| ribosome recycling factor [Rhodococcus opacus B4]
 gi|254809526|sp|C1B2U5|RRF_RHOOB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226244514|dbj|BAH54862.1| ribosome recycling factor [Rhodococcus opacus B4]
          Length = 185

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K D+ ++RTGR +P M + + ++ YG+  P+ Q+A++ V E R++
Sbjct: 6   LFEAEEKMEKAVTVAKDDLGSIRTGRANPGMFNRIGIDYYGAFTPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  ++   + ++E  I  S+LG+NP  +G ++RI VP+ TEERR  LVK A +  E +K
Sbjct: 66  VVKPYEASQLNAIETAIRNSDLGVNPSNDGNLIRISVPQLTEERRRELVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN+RR  MD L + +K G+A ED V   E ++ K T   +  +D   + K+ E++  
Sbjct: 126 VSVRNVRRKAMDELSRIQKDGEAGEDEVGRAEKELDKTTARYVAQVDELVKHKEAELLEV 185


>gi|169830793|ref|YP_001716775.1| ribosome recycling factor [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637637|gb|ACA59143.1| ribosome recycling factor [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 174

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 74/174 (42%), Positives = 113/174 (64%), Gaps = 1/174 (0%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  TI  L ++  +LR GR +P++LD + V+ YGS +P+NQ+A V+V E R+LV+  WDK
Sbjct: 1   MMKTIEVLDREFASLRAGRATPALLDRITVDYYGSTIPINQLATVSVPEARLLVIQPWDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +ER I +S+LG+ P  +G ++R+ VP+ TEERR  LVK      E++K++VRNIR
Sbjct: 61  SAIGEIERAILKSDLGITPSSDGNIIRLAVPQLTEERRRDLVKFLKKRGEEAKVAVRNIR 120

Query: 134 RDGMDHLKKSRKS-GKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD ++ LK  +K  G  SED +   +++ QK+TD  +K ID     K+KE+M  
Sbjct: 121 RDVIERLKALQKEGGGFSEDDLRREQDEAQKLTDRYVKEIDRIVAAKEKEVMEI 174


>gi|70726656|ref|YP_253570.1| ribosome recycling factor [Staphylococcus haemolyticus JCSC1435]
 gi|123660049|sp|Q4L5W1|RRF_STAHJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|68447380|dbj|BAE04964.1| ribosome recycling factor [Staphylococcus haemolyticus JCSC1435]
          Length = 184

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 81/186 (43%), Positives = 121/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  Q+ K RM  +I  L +++  +  GR + ++L  V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDII--QDTKARMSKSIDNLSRELANISAGRANSNLLSGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  VA +E+ I+ +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKSSVADIEKAIYAANLGVNPTSDGEVIRITVPALTEERRKELVKNVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  D LKK  K+G  +ED + S   D+QK TD++IK ID   E+K+
Sbjct: 119 IGEDAKVSIRNIRRDINDQLKKDEKNGDITEDDLRSQTEDVQKATDNSIKEIDQLVEDKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|323701848|ref|ZP_08113518.1| ribosome recycling factor [Desulfotomaculum nigrificans DSM 574]
 gi|323533152|gb|EGB23021.1| ribosome recycling factor [Desulfotomaculum nigrificans DSM 574]
          Length = 184

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 117/180 (65%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N ++ M  T+  ++K+  +LR GR +P++LD V V  YG+  PLNQ+AN++V E R L
Sbjct: 6   IANAEENMKKTVEVVRKEFASLRAGRATPALLDKVVVSYYGTPTPLNQLANISVPEARSL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  +  +ER I +S+LG+ P  +G V+R+ +P+ T+ERR  LVKV    AE+ +
Sbjct: 66  VIQPWDKSALPEIERAILKSDLGITPTSDGTVIRLTIPQLTQERRAELVKVVKKKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+ +D +K  +K G   ED V   + D+QKITD  IK ID   + K++EIM  
Sbjct: 126 VAIRNIRREVIDQIKAKQKEG-VPEDEVKRGQEDMQKITDKFIKEIDEMVKSKEQEIMQV 184


>gi|239994190|ref|ZP_04714714.1| ribosome recycling factor [Alteromonas macleodii ATCC 27126]
          Length = 185

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 113/186 (60%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I+L + ++RM  ++  LK     +RTGR  PS+LD + V  YG   PL QVANV  
Sbjct: 1   MIDEIEL-DAQERMEKSLVSLKGQFSKIRTGRAHPSLLDGIMVPYYGVDTPLKQVANVVA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L ++V+DK  + +VE+ I +S+LGLNP+  G  +RIP+P  TEERR  L++V   
Sbjct: 60  EDSRTLALTVFDKSAIQAVEKAIMQSDLGLNPMSAGGSIRIPLPPLTEERRKDLIRVVRN 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  ++++RNIRRD    +K   K  + SED   + E +IQ IT+  IK +DS   +K+
Sbjct: 120 EAEGGRVAIRNIRRDANGDIKDLLKEKEISEDESRAAEENIQSITNDFIKKVDSMLADKE 179

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 180 KELMEV 185


>gi|296876070|ref|ZP_06900124.1| ribosome recycling factor [Streptococcus parasanguinis ATCC 15912]
 gi|312868288|ref|ZP_07728488.1| ribosome recycling factor [Streptococcus parasanguinis F0405]
 gi|296432781|gb|EFH18574.1| ribosome recycling factor [Streptococcus parasanguinis ATCC 15912]
 gi|311096033|gb|EFQ54277.1| ribosome recycling factor [Streptococcus parasanguinis F0405]
          Length = 185

 Score =  237 bits (605), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLGREFGSIRAGRANASLLDRIFVEYYGVETPLNQLASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E  I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LITPFDKSSLKDIEHSINASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED +  LE +IQK+TD  +K++D     K+KE+M  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKGLEKEIQKVTDDAVKHVDEMTAHKEKELMEV 185


>gi|256784931|ref|ZP_05523362.1| ribosome recycling factor [Streptomyces lividans TK24]
          Length = 186

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  E YG+  P+NQ+A+ +V EPRM 
Sbjct: 7   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVAEYYGAPTPINQLASFSVPEPRMA 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA A  E +K
Sbjct: 67  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTEERRREYIKVAKAKGEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 127 VSIRSVRRKAKDSIDKMVKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 186


>gi|254415746|ref|ZP_05029504.1| ribosome recycling factor [Microcoleus chthonoplastes PCC 7420]
 gi|196177452|gb|EDX72458.1| ribosome recycling factor [Microcoleus chthonoplastes PCC 7420]
          Length = 173

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 64/170 (37%), Positives = 101/170 (59%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   ++   T+RTGR + S+LD V VE YGS  PL  +A++   +   + +  +DK
Sbjct: 1   MKKAVEATQRGFNTIRTGRANASLLDRVMVEYYGSPTPLKSLASINTPDATTITIQPYDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E+ I  S++GL P  +GQV+R+ +P  T ERR   VK+A   AE+ K+S+RNIR
Sbjct: 61  STLTLIEKSISLSDIGLTPNNDGQVVRLNIPPLTSERRQEFVKMAGKLAEEGKVSIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RD +D ++K  K+ + SED    L++ IQ++TD     ID     K+K+I
Sbjct: 121 RDAVDSVRKQEKNSEISEDESRDLQDQIQQLTDKYTAKIDDLLVAKEKDI 170


>gi|209695848|ref|YP_002263778.1| ribosome recycling factor [Aliivibrio salmonicida LFI1238]
 gi|226749946|sp|B6EK54|RRF_ALISL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|208009801|emb|CAQ80108.1| ribosome recycling factor [Aliivibrio salmonicida LFI1238]
          Length = 185

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK +++ +RTGR  PS+L  + VE YG+  P+NQVAN+   + R L 
Sbjct: 7   KDAQERMEKSVEALKNNLLKIRTGRAHPSLLSGLSVEYYGARTPINQVANIIAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR +LVK+    AE  ++
Sbjct: 67  ITVFDKELAGLVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRKSLVKIVRGEAENGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    +K   K  + SED     +++IQK+TD  +KNID     K+KE+M  
Sbjct: 127 AVRNIRRDANGDIKALLKDKEISEDDDRRTQDEIQKLTDIAVKNIDDVLAVKEKELMEV 185


>gi|114321011|ref|YP_742694.1| ribosome recycling factor [Alkalilimnicola ehrlichii MLHE-1]
 gi|122311395|sp|Q0A7I3|RRF_ALHEH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114227405|gb|ABI57204.1| ribosome recycling factor [Alkalilimnicola ehrlichii MLHE-1]
          Length = 185

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  +I   + ++  +RTGR   ++LD + V  YG+ VPLNQ A+V V + R L 
Sbjct: 7   KDAETRMKKSIEAFRAELRKIRTGRAHTNLLDHISVTYYGTEVPLNQAASVKVEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K MV  VE+ I  S+LGL P   G V+RIP+P  TE+RR  LVKV  + AE++++
Sbjct: 67  VIPFEKSMVPEVEKAIQSSDLGLTPTTAGTVIRIPMPPLTEDRRKELVKVVRSEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    LK+  K  + SED     E+ IQK+TD     +D   +EK+KE+M  
Sbjct: 127 AIRNIRRDANSDLKELLKEKEISEDEERGGEDAIQKLTDKYTGEVDRILQEKEKELMEI 185


>gi|295094737|emb|CBK83828.1| ribosome recycling factor [Coprococcus sp. ART55/1]
          Length = 181

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  ++  L+ +  T+R GR +P++L+ +KVE YG   P+ Q+AN+TV E R L
Sbjct: 2   LTQYEEKMQKSVENLEAEYATIRAGRANPNILNKIKVEYYGVPTPMQQLANITVPEARTL 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ W+  +V  +E+ I  S+LG+ P  +G+ + +  PE TE+RR  LVK      E +K
Sbjct: 62  VIAPWEPSLVKEIEKAIMNSDLGITPNNDGRNIILNFPELTEDRRKELVKDIKKKGEGAK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D +KK  K+G  SED +   E+ IQK+TD  +  ID   E K KEIM  
Sbjct: 122 VAIRNIRRDANDAIKKMEKNGDISEDELKDNEDKIQKLTDKYVGQIDKAVESKSKEIMTV 181


>gi|255638439|gb|ACU19529.1| unknown [Glycine max]
          Length = 261

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ K RM  TI  ++ +  ++RTGR +PSMLD ++VE YGS V L  +A ++  +   L+
Sbjct: 83  KDAKTRMDRTIDNVRTNFSSIRTGRANPSMLDKIQVEYYGSPVSLKSIAQISTPDASSLL 142

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  + ++E+ I  S+LG+ P  +G+++R+ +P+ T +RR  L K+    AE+ K+
Sbjct: 143 VQPYDKSSLKAIEKAIVSSDLGMTPNNDGELIRLSIPQLTSDRRKELSKIVAKQAEEGKV 202

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +    K  K  K SED V  L +D+QK+TD  +K +D+ F++K+KE++  
Sbjct: 203 ALRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKELLTV 261


>gi|194099964|ref|YP_002003103.1| ribosome recycling factor [Neisseria gonorrhoeae NCCP11945]
 gi|291042824|ref|ZP_06568565.1| ribosome-recycling factor [Neisseria gonorrhoeae DGI2]
 gi|293398155|ref|ZP_06642360.1| ribosome recycling factor [Neisseria gonorrhoeae F62]
 gi|193935254|gb|ACF31078.1| Rrf [Neisseria gonorrhoeae NCCP11945]
 gi|291013258|gb|EFE05224.1| ribosome-recycling factor [Neisseria gonorrhoeae DGI2]
 gi|291611418|gb|EFF40488.1| ribosome recycling factor [Neisseria gonorrhoeae F62]
          Length = 208

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 117/186 (62%), Gaps = 1/186 (0%)

Query: 2   NQVIDLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           N + D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+
Sbjct: 23  NMINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTL 82

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV   
Sbjct: 83  LDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRG 142

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K+
Sbjct: 143 EAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKVLAAKE 202

Query: 181 KEIMHF 186
           +++M  
Sbjct: 203 EDLMAV 208


>gi|323143563|ref|ZP_08078240.1| ribosome recycling factor [Succinatimonas hippei YIT 12066]
 gi|322416626|gb|EFY07283.1| ribosome recycling factor [Succinatimonas hippei YIT 12066]
          Length = 185

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+   RM   I  L   +  +RTGR  P +LD + V+ YGS  PL QVA V V + R L 
Sbjct: 7   QDASVRMQKAIDSLSSRLAKIRTGRAQPGILDGIMVDYYGSPTPLRQVAQVNVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+  +  VE+ I +S+LGLNP+V G  +R+P+P  TEERR  LVKV     E++++
Sbjct: 67  LTVFDRNAIKDVEKAIQKSDLGLNPVVAGIDIRVPLPPLTEERRKDLVKVVRGEIEQTRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RNIRRD  + LK   K+ + SED     E+ IQK+TD+++K  D     K+KE+M  
Sbjct: 127 EIRNIRRDANNELKALEKAKEISEDEQHGGEDQIQKLTDASVKKCDELLAAKEKELMEI 185


>gi|313679984|ref|YP_004057723.1| ribosome recycling factor [Oceanithermus profundus DSM 14977]
 gi|313152699|gb|ADR36550.1| ribosome recycling factor [Oceanithermus profundus DSM 14977]
          Length = 185

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 117/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            +  ++ M  T+   + ++ TLRTGR +P++L+ +KV+ YGS +PLNQ+A+++  + R L
Sbjct: 6   FKETREHMQKTLEVFESNLATLRTGRANPALLEHIKVDYYGSMMPLNQLASISAPDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD+  +  +E+ I +S+LGLNP  +G  L I +P  T ERR  +VK AH YAE+++
Sbjct: 66  VVQAWDQNALPLIEKAIRDSDLGLNPNNQGDTLFINIPALTAERRKEIVKAAHNYAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRNIRRD +  +KK  +     ED V   E ++Q++TD  I+ I++  E K+KEI+
Sbjct: 126 VAVRNIRRDALHRIKKMSEEEHLPEDDVKRAEKEVQELTDEFIEKINAELEAKEKEIL 183


>gi|332186160|ref|ZP_08387906.1| ribosome recycling factor [Sphingomonas sp. S17]
 gi|332013975|gb|EGI56034.1| ribosome recycling factor [Sphingomonas sp. S17]
          Length = 185

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 90/169 (53%), Positives = 117/169 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  +++ RM   +  LK D+  LRTGR S ++LD V VE YGSH+PLNQVA V+  EPR
Sbjct: 4   YDKSDLERRMQGAVESLKHDLNGLRTGRASTALLDPVTVEVYGSHMPLNQVATVSAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V VWDK  V+SVE+ I  + LGLNPI +GQ LR+P+P+ TEERR  L K+A+ YAE 
Sbjct: 64  MLSVQVWDKSNVSSVEKAIRSAGLGLNPINDGQTLRLPIPDLTEERRKELAKLANKYAES 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           ++I+VRN+RRDGMD LK   K G   ED     E ++QK+TD+TI  +D
Sbjct: 124 ARIAVRNVRRDGMDSLKTDEKKGVFGEDERKRHETEVQKLTDATIAELD 172


>gi|91792914|ref|YP_562565.1| ribosome recycling factor [Shewanella denitrificans OS217]
 gi|123061015|sp|Q12NY4|RRF_SHEDO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91714916|gb|ABE54842.1| ribosome recycling factor [Shewanella denitrificans OS217]
          Length = 185

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 80/180 (44%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PL QVANV + + R L
Sbjct: 6   LLDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGAMSPLKQVANVGIEDSRTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+V+D+ MV +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV    AE  +
Sbjct: 66  SVTVFDRSMVQAVEKAIMTSDLGLNPMTAGATLRIPLPALTEERRKDFIKVVRNEAENGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RRD +  +KK  K+ + +ED V   E+++QK TD+ IKN+D     K+KE+M  
Sbjct: 126 IAIRNVRRDAISEVKKLEKAKECTEDDVRRSEDEVQKYTDAHIKNVDEVLTAKEKELMEV 185


>gi|332530832|ref|ZP_08406758.1| ribosome recycling factor [Hylemonella gracilis ATCC 19624]
 gi|332039744|gb|EGI76144.1| ribosome recycling factor [Hylemonella gracilis ATCC 19624]
          Length = 187

 Score =  237 bits (605), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 82/187 (43%), Positives = 120/187 (64%), Gaps = 1/187 (0%)

Query: 1   MNQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  + D++ N++ +M  +I  LK ++  +RTGR +P++LD V+VE YGS VPL+QVANV 
Sbjct: 1   MTTIADIKKNVEGKMDQSIEALKNNLSKIRTGRANPALLDAVQVEYYGSMVPLSQVANVA 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           +L+ R + V  W+K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+  
Sbjct: 61  LLDARTISVQPWEKGMGAKIEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLVR 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E +KI+VRN+RRDG + +KK  K   ASED     E DIQK TD  +  ID     K
Sbjct: 121 NEGEAAKIAVRNLRRDGNEAVKKLVKDKTASEDDQKRAEADIQKFTDKHVATIDQLVAAK 180

Query: 180 KKEIMHF 186
           ++E+M  
Sbjct: 181 EQEVMAV 187


>gi|87118624|ref|ZP_01074523.1| ribosome recycling factor [Marinomonas sp. MED121]
 gi|86166258|gb|EAQ67524.1| ribosome recycling factor [Marinomonas sp. MED121]
          Length = 185

 Score =  236 bits (604), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RMG +I+ ++     +RTGR  PS+LD V+++ YGS  PL+QVAN+TV + R L
Sbjct: 6   LLDAEERMGKSITAVETAFKKIRTGRAHPSILDSVRIDYYGSDTPLSQVANITVEDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S W+K +V  +E+ I +S+LGLNP   G ++RIP+P  TEE R    K A A AE ++
Sbjct: 66  GISPWEKNLVPEIEKAIMKSDLGLNPSTTGGLIRIPMPALTEETRKNYFKQAKAEAESAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD     K   K  + SED     ++ +QK+TD  +  ++    +K+K++M  
Sbjct: 126 VSIRNIRRDANAGFKSLVKEKEISEDDDRRAQDLVQKLTDKYVAEVEDRLAKKEKDLMAI 185


>gi|294631670|ref|ZP_06710230.1| ribosome recycling factor [Streptomyces sp. e14]
 gi|292835003|gb|EFF93352.1| ribosome recycling factor [Streptomyces sp. e14]
          Length = 185

 Score =  236 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +K
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREYIKVAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 126 VSIRSVRRKAKDAIDKLVKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKESELLEV 185


>gi|21223982|ref|NP_629761.1| ribosome recycling factor [Streptomyces coelicolor A3(2)]
 gi|289768824|ref|ZP_06528202.1| ribosome recycling factor [Streptomyces lividans TK24]
 gi|6831642|sp|O86770|RRF_STRCO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|3319759|emb|CAA19925.1| ribosome recycling factor [Streptomyces coelicolor A3(2)]
 gi|289699023|gb|EFD66452.1| ribosome recycling factor [Streptomyces lividans TK24]
          Length = 185

 Score =  236 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  E YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVAEYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA A  E +K
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTEERRREYIKVAKAKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 126 VSIRSVRRKAKDSIDKMVKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|148826547|ref|YP_001291300.1| ribosome recycling factor [Haemophilus influenzae PittEE]
 gi|148716707|gb|ABQ98917.1| ribosome recycling factor [Haemophilus influenzae PittEE]
          Length = 173

 Score =  236 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 73/173 (42%), Positives = 110/173 (63%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++  LK  +  +RTGR  PS+LD ++VE YG+  PL Q+ANV   + R L V+V+D+
Sbjct: 1   MEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLAVTVFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++++VE+ I  S+LGLNP   G  +R+P+P  TEERR  L+K+     E+ K+++RN+R
Sbjct: 61  SLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRNLIKIVKGEGEQGKVAIRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K   K  + SE+     E +IQKITD  IK +D    +K+KE+M F
Sbjct: 121 RDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEVLADKEKELMDF 173


>gi|82701793|ref|YP_411359.1| ribosome recycling factor [Nitrosospira multiformis ATCC 25196]
 gi|123544950|sp|Q2YBA4|RRF_NITMU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|82409858|gb|ABB73967.1| ribosome recycling factor [Nitrosospira multiformis ATCC 25196]
          Length = 185

 Score =  236 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  ++  LK D+  +RTGR    +LD V V+ YG+   +NQVAN+++ + R + 
Sbjct: 7   KSAEQKMQKSLEALKLDLGKIRTGRAHTGLLDHVTVDYYGNPTAINQVANISLADARTIT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K+M+ ++E+ I  S+LGLNP   G+++R+P+P  TEERR  L KV     E +++
Sbjct: 67  VAPWEKKMLGAIEKAIRNSDLGLNPTTVGELIRVPMPPLTEERRRDLTKVVKHEGEAARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD   HLK   K  K +ED     + DIQK+TD  I +ID   + K+ E+M  
Sbjct: 127 AMRNIRRDANAHLKDLLKEKKIAEDEERKGQEDIQKLTDRYIADIDKLLQAKEAELMAV 185


>gi|95928705|ref|ZP_01311451.1| ribosome recycling factor [Desulfuromonas acetoxidans DSM 684]
 gi|95135050|gb|EAT16703.1| ribosome recycling factor [Desulfuromonas acetoxidans DSM 684]
          Length = 185

 Score =  236 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   +  M   I  LK+++  +RTGR S S+LD V V+ YG+  PLNQV  ++V E R++
Sbjct: 6   MSKERKSMDGAIDALKRELSKVRTGRASVSLLDEVCVDYYGTPTPLNQVGTLSVPEARLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K ++  +E+ I +S+LGL P  +G ++RI +P  TEERR  +VK+  + +E++K
Sbjct: 66  TIQPWEKNLLPEIEKAIFKSDLGLTPSSDGDLIRISIPPLTEERRKEMVKLVKSKSEETK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R+ RRDG D LKK  K  + +ED +   E ++Q +TD  ++  D    EK+KE+M  
Sbjct: 126 ISIRSSRRDGNDALKKLEKDKEITEDDLKRSEKEMQDLTDKYVQKCDDIVAEKEKELMEV 185


>gi|291519555|emb|CBK74776.1| ribosome recycling factor [Butyrivibrio fibrisolvens 16/4]
          Length = 173

 Score =  236 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 71/173 (41%), Positives = 110/173 (63%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  + + L+ +  T+R GR +P +LD + V+ YG+  PL QVAN++V EPR++ +  W+ 
Sbjct: 1   MTKSYNNLESEFTTIRAGRANPHILDKITVDYYGAPTPLQQVANISVPEPRLIQIQPWEP 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            +V  +E+ I+ S++G+NP  +G+++R+  PE TEERR  + K    + E +K+++RNIR
Sbjct: 61  SLVKEIEKAINMSDIGINPTNDGKLIRLVFPELTEERRKEIAKDVKKHGEDAKVAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD +DHLKK  K    SED +  LE+  QK+TD  I  +D   E K KEIM  
Sbjct: 121 RDAIDHLKKHSKDEGVSEDEIKDLEDKCQKMTDKFIAEVDKAVEAKTKEIMTV 173


>gi|269101942|ref|ZP_06154639.1| ribosome recycling factor [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268161840|gb|EEZ40336.1| ribosome recycling factor [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 185

 Score =  236 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K RM  ++  LK  +  +RTGR  PS+LD + VE YG++ PLNQVANV   + R L 
Sbjct: 7   QDAKTRMEKSVDALKSQLAKVRTGRAHPSLLDTIYVEYYGANTPLNQVANVVAEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+E+   VE+ I  S+LGLNP+  G V+R+P+P  TEERR  LVK+  A AE+ ++
Sbjct: 67  ITVFDRELAPKVEKAIMMSDLGLNPMSAGTVIRVPLPALTEERRRDLVKIVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD   ++K   K  + SED     +++IQK+TD  IK+I++  E K+KE+M  
Sbjct: 127 AVRNIRRDANANVKALLKDKEISEDDDRRAQDEIQKLTDDAIKSIEAVLEVKEKELMEV 185


>gi|296387840|ref|ZP_06877315.1| ribosome recycling factor [Pseudomonas aeruginosa PAb1]
          Length = 185

 Score =  236 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  ++RMG T+  L      +RTGR  PS+LD V V  YG+  PL QVANVTV + R L 
Sbjct: 7   KEAQERMGKTLEALGHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVTVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE++++
Sbjct: 67  LAVFDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPMPGLTEETRKGYTKQARAEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD +  LK  +K  + SED      +D+QK+TD  I  I+   E K+ ++M  
Sbjct: 127 SVRNIRRDALAQLKDLQKEKEISEDEERRAGDDVQKLTDKFIGEIEKALEAKEADLMAV 185


>gi|260426114|ref|ZP_05780093.1| ribosome recycling factor [Citreicella sp. SE45]
 gi|260420606|gb|EEX13857.1| ribosome recycling factor [Citreicella sp. SE45]
          Length = 187

 Score =  236 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 87/188 (46%), Positives = 126/188 (67%), Gaps = 3/188 (1%)

Query: 1   MNQVIDLQ--NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M++  +L   ++K RM   +S L+ +  +LRTGR S SML+ V+VEAYG   P+NQV  V
Sbjct: 1   MSEDFELDTDDLKRRMDGAMSNLRTEFASLRTGRASGSMLEPVQVEAYGQMTPINQVGTV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
            V EPRM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA
Sbjct: 61  NVPEPRMVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
             YAE +++++RN+RRDGMD +KK++  G  +ED     E+++Q ITD  IK +D   E 
Sbjct: 121 GHYAEHARVAIRNVRRDGMDQVKKAKADG-MAEDDQKFWESEVQDITDLYIKKVDEALEH 179

Query: 179 KKKEIMHF 186
           K++EIM  
Sbjct: 180 KQEEIMQV 187


>gi|308270379|emb|CBX26991.1| Ribosome-recycling factor [uncultured Desulfobacterium sp.]
          Length = 191

 Score =  236 bits (604), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            Q +++ MG +I+ L+ ++  +RTGR S S+LD ++V+ YG+  PLNQ+A+++V E R++
Sbjct: 12  FQEVRENMGKSIAALQNELKRVRTGRASLSILDGIRVDYYGTLTPLNQIASLSVPESRLI 71

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  WD   +  +E+ I +S+LGL P  +G+++RI +P  TE+RR  LVKV H   E  K
Sbjct: 72  TVQPWDVSAIKEIEKAILKSDLGLTPSSDGKIIRISIPPLTEDRRKKLVKVVHKMCEDYK 131

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD  + +K  +K G  +ED     ++ IQKITD  IK ID  ++EK+KEI+ F
Sbjct: 132 IAVRNIRRDSNESIKGFKKDGDLAEDAAFKAQDSIQKITDEHIKLIDGIYKEKEKEILEF 191


>gi|332527873|ref|ZP_08403910.1| ribosome recycling factor [Rubrivivax benzoatilyticus JA2]
 gi|332112450|gb|EGJ12243.1| ribosome recycling factor [Rubrivivax benzoatilyticus JA2]
          Length = 186

 Score =  236 bits (604), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 77/184 (41%), Positives = 114/184 (61%), Gaps = 1/184 (0%)

Query: 4   VIDLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + D+Q    ++M  ++   K ++  +RTGR  P +LD V VE YGS +P++QVANV++L+
Sbjct: 3   IADIQKTAAEKMAKSVDAFKNELHKIRTGRAHPGILDQVHVEYYGSMLPISQVANVSLLD 62

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R + V  W+K M   +E+ I ES+LGLNP  +G +LR+P+P  TEERR  L KV     
Sbjct: 63  ARTISVQPWEKGMGPKIEKAIRESDLGLNPSAQGDLLRVPMPALTEERRKELTKVVRHTG 122

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E++KI VR +RRD  D LKK  K    SED     ++++Q++TD TI  ID   + K+ E
Sbjct: 123 EEAKIHVRAVRRDANDQLKKLVKDKLVSEDDERRGQDEVQRLTDRTIAEIDKLVQAKEAE 182

Query: 183 IMHF 186
           +M  
Sbjct: 183 VMAV 186


>gi|114331998|ref|YP_748220.1| ribosome recycling factor [Nitrosomonas eutropha C91]
 gi|122313298|sp|Q0AEH7|RRF_NITEC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114309012|gb|ABI60255.1| ribosome recycling factor [Nitrosomonas eutropha C91]
          Length = 185

 Score =  236 bits (604), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 67/184 (36%), Positives = 113/184 (61%), Gaps = 1/184 (0%)

Query: 4   VIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + D++   + +M  ++  LK D   +R+GR    +LD + V+ YG+  P+ Q+ANVT+ +
Sbjct: 2   IADIKKATEQKMQKSLDALKVDFSKVRSGRPHTGLLDHITVDYYGTPTPIRQLANVTLAD 61

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R + V  WDK+  +++E+ I +S++GLNP+  G+++R+P+P  TEERR  L K+    A
Sbjct: 62  ARTIGVIPWDKKAFSAIEKAIRDSDMGLNPMTAGEMVRVPMPPLTEERRKDLTKIVRTEA 121

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E ++I++RNIRRD    LK+  K    +ED     ++DIQK+TD  I  +D   + K+ E
Sbjct: 122 ETARIAMRNIRRDANTQLKELLKDKLIAEDEDRRAQDDIQKLTDRYIAEVDKLLQAKEAE 181

Query: 183 IMHF 186
           +M  
Sbjct: 182 LMAV 185


>gi|56696546|ref|YP_166903.1| ribosome recycling factor [Ruegeria pomeroyi DSS-3]
 gi|60390661|sp|Q5LSV2|RRF_SILPO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56678283|gb|AAV94949.1| ribosome recycling factor [Ruegeria pomeroyi DSS-3]
          Length = 187

 Score =  236 bits (604), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 85/182 (46%), Positives = 123/182 (67%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++K RM   ++ LK +  +LRTGR S SML+ ++VEAYG   P+NQ+  V V EPR
Sbjct: 7   LDTDDLKRRMDGAMANLKTEFASLRTGRASGSMLEPIQVEAYGQMTPINQIGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK MV  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKSMVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAGQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++  G  SED     E ++Q++TD  IK +D+  E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKAKADG-ISEDDQKFWEAEVQELTDKMIKVVDAALETKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|159028125|emb|CAO89732.1| frr [Microcystis aeruginosa PCC 7806]
          Length = 182

 Score =  236 bits (604), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++D M  T+   ++   T+RTGR + S+LD + VE YG   PL  +A ++  +   +
Sbjct: 3   LAEVQDHMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  + ++E+ I  S++GL P  +GQ +R+ +P  T +RR  LVK+A   AE+ K
Sbjct: 63  AIQPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD +D ++K  KS + SED    L++ +QK TD  I  I+     K+K+IM  
Sbjct: 123 VAVRNIRRDAIDAIRKQEKSHEISEDESRDLQDQVQKSTDKFIAKIEDLLTTKEKDIMTV 182


>gi|296117647|ref|ZP_06836231.1| ribosome recycling factor [Corynebacterium ammoniagenes DSM 20306]
 gi|295969378|gb|EFG82619.1| ribosome recycling factor [Corynebacterium ammoniagenes DSM 20306]
          Length = 185

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 73/178 (41%), Positives = 119/178 (66%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             ++RM +++   +++++T+RTGR +PSM + V  E YG   P+ Q+++++V EPRML++
Sbjct: 8   ESEERMANSVEHTREELVTIRTGRANPSMFNGVVAEYYGVPTPITQMSSISVPEPRMLLI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +++ M+  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  LVKVA +  E  KI+
Sbjct: 68  KPYEQSMMGEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDLVKVAKSKGEDGKIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRR  M+ LKK +K G A ED +A+ E +++KIT   I+ +D     K+ E+M  
Sbjct: 128 IRNIRRKAMEQLKKLQKDGDAGEDEIAAAEKEMEKITHGYIEQVDKLVANKEAELMEV 185


>gi|116872745|ref|YP_849526.1| ribosome recycling factor [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123458442|sp|A0AIB5|RRF_LISW6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116741623|emb|CAK20747.1| ribosome recycling factor [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 185

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LTKSKEKMDKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAPTPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTVLGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNID+  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDNITKDKEAEILEV 185


>gi|313673948|ref|YP_004052059.1| ribosome recycling factor [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312940704|gb|ADR19896.1| ribosome recycling factor [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 184

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 114/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
               K++M  T+   K ++ ++RTGR S S+ D +KV+ YG+  PL+QVA +   EPRM+
Sbjct: 6   FNKTKEKMEKTLEHYKTELKSVRTGRASVSLFDNIKVDYYGTPTPLSQVAALNA-EPRMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+  M+  +E+ I  SNLGL P  +G+V+R+P+P  TEERR  +VK+    +E++K
Sbjct: 65  IIQPWEPSMIKPIEKAILTSNLGLTPSNDGRVIRVPIPPLTEERRKEIVKLVKKMSEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN RRD ++ LKK  K  + SED        IQK+TD  IK ID   E+K+KEIM  
Sbjct: 125 IAIRNERRDAIEKLKKMEKDKEISEDDNKKGAEQIQKLTDEYIKKIDEVTEKKEKEIMEI 184


>gi|27467853|ref|NP_764490.1| ribosome recycling factor [Staphylococcus epidermidis ATCC 12228]
 gi|57866733|ref|YP_188408.1| ribosome recycling factor [Staphylococcus epidermidis RP62A]
 gi|293366777|ref|ZP_06613453.1| ribosome recycling factor [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|33301559|sp|Q8CSU0|RRF_STAES RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|62900782|sp|Q5HPT2|RRF_STAEQ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|27315398|gb|AAO04532.1|AE016747_29 ribosome recycling factor [Staphylococcus epidermidis ATCC 12228]
 gi|57637391|gb|AAW54179.1| ribosome recycling factor [Staphylococcus epidermidis RP62A]
 gi|291319078|gb|EFE59448.1| ribosome recycling factor [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329736280|gb|EGG72552.1| ribosome recycling factor [Staphylococcus epidermidis VCU028]
 gi|329736543|gb|EGG72809.1| ribosome recycling factor [Staphylococcus epidermidis VCU045]
          Length = 184

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 121/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDII--KDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKSSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD++IK ID    +K+
Sbjct: 119 IGEDAKVSIRNIRRDINDQLKKDEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVADKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|152987346|ref|YP_001346870.1| ribosome recycling factor [Pseudomonas aeruginosa PA7]
 gi|166230818|sp|A6V1D5|RRF_PSEA7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|150962504|gb|ABR84529.1| ribosome recycling factor [Pseudomonas aeruginosa PA7]
          Length = 185

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  ++RMG T+  L      +RTGR  PS+LD V V  YG+  PL QVANVTV + R L 
Sbjct: 7   KEAQERMGKTLEALGHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVTVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE++++
Sbjct: 67  LAVFDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRKGYTKQARAEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD +  LK  +K  + SED      +D+QK+TD  I  I+   E K+ ++M  
Sbjct: 127 SVRNIRRDALAQLKDLQKEKEISEDDERRAGDDVQKLTDKFIGEIEKALEAKEADLMAV 185


>gi|240171728|ref|ZP_04750387.1| ribosome recycling factor [Mycobacterium kansasii ATCC 12478]
          Length = 185

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  + D+ T+RTGR +P M   + ++ YG++ P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVSVARDDLSTIRTGRANPGMFSRIVIDYYGTNTPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ +P+ TEERR  LVK A    E+++
Sbjct: 66  VIKPYEANQLHAIETAIRNSDLGVNPTNDGTLIRVAIPQLTEERRRELVKQAKHKGEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + RK G+A ED V   E D+ K T   +  ID   + K+ E++  
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDKTTHHYVAQIDELVKHKEGELLEV 185


>gi|149928181|ref|ZP_01916426.1| ribosome recycling factor [Limnobacter sp. MED105]
 gi|149823072|gb|EDM82312.1| ribosome recycling factor [Limnobacter sp. MED105]
          Length = 186

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +++M  +I  LK D+  +RTGR    +LD V+V+ YGS VP++QVAN+++ + R +V
Sbjct: 8   KTTEEKMVKSIESLKTDLQKVRTGRAHTGILDHVQVDYYGSMVPISQVANLSLADARTIV 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M  +VE+ I ES+LGLNP   G+ +R+P+P  TEERR  L K      E++K+
Sbjct: 68  VQPWEKNMANAVEKAIRESDLGLNPASMGETIRVPMPALTEERRKELTKFIKGEGEQTKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + LK+     + SED     + DIQK+TD  +  +D   + K+ EIM  
Sbjct: 128 AIRNLRRDANEALKRLVNDKEISEDDERRAQADIQKLTDKFVSEVDQVLQSKEAEIMTV 186


>gi|254421634|ref|ZP_05035352.1| ribosome recycling factor [Synechococcus sp. PCC 7335]
 gi|196189123|gb|EDX84087.1| ribosome recycling factor [Synechococcus sp. PCC 7335]
          Length = 185

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 67/178 (37%), Positives = 105/178 (58%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL  ++  M   +   K+   T+RTGR S S+LD + V+ YGS   L  +AN+T  +   
Sbjct: 5   DLGEVESAMQKAVESTKRAFNTIRTGRASASLLDRIMVDYYGSPTSLKSLANITTPDAST 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L++  +D   V  + + I  S++GL P  +G ++R+ +P  T ERR    K+A  YAE+ 
Sbjct: 65  LMIQAFDPSSVQLIAKAISMSDVGLVPNTDGALIRLNIPPLTTERRQEFAKLAGKYAEEG 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++SVRN+RRDG+D  KK  K G+ SED    +++++QK+TD   K ID    +K+K I
Sbjct: 125 RVSVRNVRRDGIDLAKKQEKDGEISEDESRDMQDEVQKLTDKYTKQIDEALADKEKAI 182


>gi|300311496|ref|YP_003775588.1| ribosome recycling factor [Herbaspirillum seropedicae SmR1]
 gi|300074281|gb|ADJ63680.1| ribosome recycling factor (ribosome releasing factor) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 186

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I  LK ++  +RTGR    +LD V V+ YGS   L+QVAN+T+++ R + 
Sbjct: 8   KNSEQKMAKSIETLKANLAKVRTGRAHTGLLDQVMVDYYGSPTGLSQVANLTLIDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K+MVA VE+ I E++LGLNP   G+++R+P+P  TEERR  +VK+    AE +KI
Sbjct: 68  VQPYEKKMVAVVEKAIREADLGLNPATHGELIRVPMPPLTEERRKEMVKLVKGEAEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRR+G + LKK  K   ASED     +++IQK+TD  +  ID    +K+KE+M  
Sbjct: 128 AVRNIRREGNESLKKLVKDKVASEDDERRGQDEIQKLTDKFVAEIDKLVSDKEKEVMTV 186


>gi|89068188|ref|ZP_01155598.1| ribosome recycling factor [Oceanicola granulosus HTCC2516]
 gi|89046105|gb|EAR52163.1| ribosome recycling factor [Oceanicola granulosus HTCC2516]
          Length = 186

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 84/185 (45%), Positives = 125/185 (67%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++D  +++ RM  T++ L+ +  +LRTGR S SML+ V+VEAYG   P+NQV  V V 
Sbjct: 4   DFILDTDDLQRRMDGTMNNLRTEFASLRTGRASASMLEPVQVEAYGQMTPINQVGTVNVP 63

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPRM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y
Sbjct: 64  EPRMVTINVWDKGLVNKVEKAIRESGLGINPQMNGTIIMLPIPELNEERRRELTKVAGQY 123

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE +++S+RN+RRDGMD +KK+  +   +ED     E ++Q++TD  IK++D   E K+ 
Sbjct: 124 AEHARVSIRNVRRDGMDQIKKA--ADGMAEDDRKLWEAEVQEMTDKYIKSVDDALEHKQA 181

Query: 182 EIMHF 186
           EIM  
Sbjct: 182 EIMQV 186


>gi|242080283|ref|XP_002444910.1| hypothetical protein SORBIDRAFT_07g001230 [Sorghum bicolor]
 gi|241941260|gb|EES14405.1| hypothetical protein SORBIDRAFT_07g001230 [Sorghum bicolor]
          Length = 265

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              K++M   I  ++ +  T+RTGR +P+MLD ++VE YG+ V L  +A ++  +   L+
Sbjct: 87  DQAKEKMEKAIETVQTNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLL 146

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK  +  +E+ I  +NLG+ P  +G+V+R+ VP  T +RR  L K     +E  K+
Sbjct: 147 IQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLSEDGKV 206

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +    K +K  K SED V  L  D+QK+TD  +K IDS  ++K++E+M  
Sbjct: 207 AIRNIRRDAIKAYDKLQKEKKLSEDNVKDLSADLQKVTDEYMKKIDSIQKQKEQELMKI 265


>gi|297202666|ref|ZP_06920063.1| ribosome recycling factor [Streptomyces sviceus ATCC 29083]
 gi|197713241|gb|EDY57275.1| ribosome recycling factor [Streptomyces sviceus ATCC 29083]
          Length = 185

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA   AE SK
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRRDYIKVARGKAEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R++RR   D + K  K G+  ED     E D+   T   +  +D   + K+ E++  
Sbjct: 126 VSIRSVRRKAKDAIDKLVKDGEVGEDEGRRAEKDLDDATHKYVAQVDELLKHKEAELLEV 185


>gi|110834007|ref|YP_692866.1| ribosome recycling factor [Alcanivorax borkumensis SK2]
 gi|123050546|sp|Q0VQF4|RRF_ALCBS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110647118|emb|CAL16594.1| Ribosome recycling factor [Alcanivorax borkumensis SK2]
          Length = 185

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + + RM  ++  L   M  +RTGR  PS+LD + +E YG+  PLNQ+ N++V E R L 
Sbjct: 7   SDAQSRMKKSLEALDTAMKRVRTGRAHPSLLDNITIEYYGAETPLNQMGNISVEEGRTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S +DK ++  +ER I  S+LGLNP   G ++R+P+P  TEE R  LVKV  A AE++++
Sbjct: 67  ISPFDKSLIPQIERAILMSDLGLNPSTSGTLIRLPLPPLTEETRRDLVKVVRAEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD    LK+  K  + SED     E  IQ++TD  +  ++   +EK++E+M  
Sbjct: 127 SIRNIRRDANSDLKELLKEKEISEDEQRRGEEQIQQLTDKMVAEVEGVLKEKEEELMTV 185


>gi|167630327|ref|YP_001680826.1| ribosome recycling factor [Heliobacterium modesticaldum Ice1]
 gi|238687988|sp|B0THE0|RRF_HELMI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167593067|gb|ABZ84815.1| ribosome recycling factor [Heliobacterium modesticaldum Ice1]
          Length = 185

 Score =  236 bits (603), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +D+M  T+  L+K+   +R GR +P++L+ V VE YG+  P+NQ+AN++  E R+LV
Sbjct: 7   KETEDKMKKTVEALRKEYQHIRAGRANPALLEKVTVEYYGAPTPVNQLANISAPEARLLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK ++ ++E+ I +S+LGL P  +G V+R+ +P+ T+ERR  LVK     AE+ ++
Sbjct: 67  IQPWDKSVLPALEKAILKSDLGLTPTSDGAVIRLVIPQLTQERRSELVKTVKKRAEEHRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RN+RRD  + +K  +K    SED     + +IQK+TD  I+ +D   E K+ EIM  
Sbjct: 127 ILRNLRRDANEDVKDLQKEHIISEDEGKRAQEEIQKLTDKYIREVDQVAERKEAEIMEV 185


>gi|332298055|ref|YP_004439977.1| Ribosome-recycling factor [Treponema brennaborense DSM 12168]
 gi|332181158|gb|AEE16846.1| Ribosome-recycling factor [Treponema brennaborense DSM 12168]
          Length = 183

 Score =  236 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 83/173 (47%), Positives = 119/173 (68%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           RM  TI+ LK D  TLRTGR S ++ D V+V+ YG+  PLNQV+ ++V E R +V+  +D
Sbjct: 10  RMEKTIAALKDDFKTLRTGRASAAIFDKVRVDYYGTPTPLNQVSTISVPEARSIVIQPFD 69

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++  +E+ I +S LGLNP  +G+V+RI +P  T +RR  LVK A A AE S++++RNI
Sbjct: 70  KSLIGEIEKAIQKSELGLNPSNDGKVIRIAIPPLTADRRKELVKQAKATAENSRVAIRNI 129

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RRDG D LKK +K G  +ED + + E ++QK TD  I++I+   EEK+KEIM 
Sbjct: 130 RRDGNDDLKKQQKDGSLTEDGLKTAETELQKSTDKFIQDINKILEEKEKEIME 182


>gi|218459807|ref|ZP_03499898.1| ribosome recycling factor [Rhizobium etli Kim 5]
          Length = 177

 Score =  236 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 106/176 (60%), Positives = 133/176 (75%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ID++ +K RM   +S  K D+ +LRTGR S ++LD V +EAYGS VPLNQVAN+TV
Sbjct: 1   MSEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRVPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV++VERGI ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLTVSVWDKSMVSAVERGIRESNLGLNPIVDGQSLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
           YAEKSK+++R++RRDGMD LKK+ K G   +D   +    +QK+TD TI  ID   
Sbjct: 121 YAEKSKVAIRHVRRDGMDGLKKAEKDGVIGQDESRAQSERVQKMTDETISEIDRLL 176


>gi|15598849|ref|NP_252343.1| ribosome recycling factor [Pseudomonas aeruginosa PAO1]
 gi|107103167|ref|ZP_01367085.1| hypothetical protein PaerPA_01004236 [Pseudomonas aeruginosa PACS2]
 gi|116051650|ref|YP_789511.1| ribosome recycling factor [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890122|ref|YP_002438986.1| ribosome recycling factor [Pseudomonas aeruginosa LESB58]
 gi|254236567|ref|ZP_04929890.1| ribosome recycling factor [Pseudomonas aeruginosa C3719]
 gi|254242350|ref|ZP_04935672.1| ribosome recycling factor [Pseudomonas aeruginosa 2192]
 gi|313109058|ref|ZP_07795030.1| ribosome recycling factor [Pseudomonas aeruginosa 39016]
 gi|6226046|sp|O82853|RRF_PSEAE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122260793|sp|Q02RC5|RRF_PSEAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703267|sp|B7V7G0|RRF_PSEA8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|9949814|gb|AAG07041.1|AE004785_5 ribosome recycling factor [Pseudomonas aeruginosa PAO1]
 gi|3417449|dbj|BAA32345.1| ribosome recycling factor [Pseudomonas aeruginosa]
 gi|115586871|gb|ABJ12886.1| ribosome recycling factor [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126168498|gb|EAZ54009.1| ribosome recycling factor [Pseudomonas aeruginosa C3719]
 gi|126195728|gb|EAZ59791.1| ribosome recycling factor [Pseudomonas aeruginosa 2192]
 gi|218770345|emb|CAW26110.1| ribosome recycling factor [Pseudomonas aeruginosa LESB58]
 gi|310881532|gb|EFQ40126.1| ribosome recycling factor [Pseudomonas aeruginosa 39016]
          Length = 185

 Score =  236 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  ++RMG T+  L      +RTGR  PS+LD V V  YG+  PL QVANVTV + R L 
Sbjct: 7   KEAQERMGKTLEALGHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVTVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE++++
Sbjct: 67  LAVFDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRKGYTKQARAEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD +  LK  +K  + SED      +D+QK+TD  I  I+   E K+ ++M  
Sbjct: 127 SVRNIRRDALAQLKDLQKEKEISEDEERRAGDDVQKLTDKFIGEIEKALEAKEADLMAV 185


>gi|258545341|ref|ZP_05705575.1| ribosome recycling factor [Cardiobacterium hominis ATCC 15826]
 gi|258519444|gb|EEV88303.1| ribosome recycling factor [Cardiobacterium hominis ATCC 15826]
          Length = 185

 Score =  236 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM  ++  L+ ++  +RTGR + S+LD V+VE YGS VPL+Q ANVTV + R L 
Sbjct: 7   KDAAARMEKSVKSLEHELSKIRTGRANVSLLDHVQVEYYGSMVPLSQAANVTVTDYRSLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           + VW++ MVA +E+ +  S+LGL P   GQ + I +P  TEERR  LVK+     E++K+
Sbjct: 67  IQVWERNMVAVIEKALINSDLGLTPNTAGQNIHINLPPLTEERRKDLVKIVRNEGEQAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD    +K+     +ASED     E +IQK+TD  ++ +D    EK+KE+M  
Sbjct: 127 AIRNVRRDANQSVKQLVTDKQASEDDERRAEAEIQKLTDKYVEQVDKVLAEKEKELMEV 185


>gi|291166148|gb|EFE28194.1| ribosome recycling factor [Filifactor alocis ATCC 35896]
          Length = 185

 Score =  236 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/178 (41%), Positives = 112/178 (62%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
            ++D+M  TIS LK+++  +R GR +P+MLD + V+ YGS  PL Q+A ++  +PR +V+
Sbjct: 8   ELEDKMTKTISVLKEELSVIRAGRANPAMLDKISVDYYGSQTPLKQMAGISSPDPRTIVI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WDK  +  +E+ I  S+LG NP  +G+V+RI +P+ TEERR  LVK+     E+SK++
Sbjct: 68  QPWDKTALKEIEKAILASDLGFNPSNDGEVIRINIPQLTEERRKELVKLVSKTGEQSKVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RN RRD  D +KK  K G+  ED      +++Q I D   K IDS   +K+ EIM  
Sbjct: 128 LRNARRDTNDKIKKIEKDGELGEDDAKKALDEVQHIIDKYTKEIDSVVAKKEAEIMEI 185


>gi|255020970|ref|ZP_05293025.1| Ribosome recycling factor [Acidithiobacillus caldus ATCC 51756]
 gi|254969575|gb|EET27082.1| Ribosome recycling factor [Acidithiobacillus caldus ATCC 51756]
          Length = 186

 Score =  236 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 65/179 (36%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  +I  LK ++  LRTGR S  +LD V+V+ YGS  PL+QVA+++V + R L+
Sbjct: 8   KDAEQRMKKSIEALKSELTRLRTGRASAGLLDHVEVDYYGSPTPLSQVASISVADARSLL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K ++  +++ I ++ LGLNP+     +R+P+P  +EERR  +VK+     E +++
Sbjct: 68  VTPWEKPLIPKIDKAIRDAGLGLNPVAGSDNVRVPLPALSEERRKEMVKIVRQEGEGARV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K   K    SED     E + QK+TD  +  +D   E K+ ++M  
Sbjct: 128 AIRNIRRDAIAQVKDLLKQKSISEDEGRRAEEEFQKLTDRFVDEVDGVVEAKESDLMEV 186


>gi|291286434|ref|YP_003503250.1| ribosome recycling factor [Denitrovibrio acetiphilus DSM 12809]
 gi|290883594|gb|ADD67294.1| ribosome recycling factor [Denitrovibrio acetiphilus DSM 12809]
          Length = 185

 Score =  236 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/170 (41%), Positives = 109/170 (64%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
           TIS  K ++ T+RTGR S +M D V V+ YG+  PL+ VA++   EPR++ +  WD  ++
Sbjct: 16  TISHFKDELKTIRTGRASVAMFDGVTVDYYGTPTPLSGVASLNAPEPRLITIQPWDMSII 75

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
            ++E+ I  SN+G NP  +G+++RIPVP+ TEERR  +VK+    AE +K+++RN+RR+G
Sbjct: 76  GAIEKAIQNSNMGFNPSNDGKIIRIPVPQLTEERRKEIVKLVKKMAEDNKVAIRNLRREG 135

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            D +KK  K  + SED       DIQ +T+  IK +D     K+KE+M  
Sbjct: 136 NDKIKKLEKDKEISEDDSKKFVADIQDVTNDFIKKVDEVTAAKEKEVMEI 185


>gi|269926622|ref|YP_003323245.1| ribosome recycling factor [Thermobaculum terrenum ATCC BAA-798]
 gi|269790282|gb|ACZ42423.1| ribosome recycling factor [Thermobaculum terrenum ATCC BAA-798]
          Length = 185

 Score =  236 bits (602), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + RM  +I  LKKD+  +R+GR +P +++ ++VE YG   PL Q+A+++V EPRM+
Sbjct: 6   LADAEKRMRHSIDVLKKDLANIRSGRATPGLVEHIEVEYYGVPTPLIQLASISVPEPRMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ WD   +  +E+ I +S LGLNP  +G+++RI VP  TEERR +LVK+     E+ +
Sbjct: 66  AITPWDPNSIGPIEKAIQKSELGLNPSNDGKIIRILVPPLTEERRRSLVKMVRQRVEEDR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD M+ +K+ +     SED     +  +Q++TD  IK  DS  E+K++EI+  
Sbjct: 126 VAIRNIRRDVMNDIKQMQHEKMISEDEARRAQEKLQQLTDKYIKEADSLGEQKEQEILTV 185


>gi|269118716|ref|YP_003306893.1| ribosome recycling factor [Sebaldella termitidis ATCC 33386]
 gi|268612594|gb|ACZ06962.1| ribosome recycling factor [Sebaldella termitidis ATCC 33386]
          Length = 185

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 68/177 (38%), Positives = 115/177 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +M   +   K    ++R GR + SMLD + V+AYG+  PL+Q+  ++  E R+L
Sbjct: 6   LKETETKMEKAVESTKDKFASIRAGRANVSMLDGITVDAYGAPSPLSQIGTLSAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK ++ ++E+ I ++NLGLNP  +G+++R+ VPE TEERR   VK+    AE+ K
Sbjct: 66  TIDPWDKSLIPAIEKAIQQANLGLNPSNDGRIIRLSVPELTEERRKEYVKMVRKEAEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIR+D  + L+KS K  + +ED + S E+ +QK+TD   K +D   ++K+KE+
Sbjct: 126 VAIRNIRKDVNNKLRKSEKDSEITEDDLKSGEDSVQKLTDKFTKLVDEALDKKEKEL 182


>gi|331005977|ref|ZP_08329322.1| Ribosome recycling factor [gamma proteobacterium IMCC1989]
 gi|330420222|gb|EGG94543.1| Ribosome recycling factor [gamma proteobacterium IMCC1989]
          Length = 185

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  K +M  ++  L  +   +RTGR  PS+LD +KV+ YGS  PL+QVAN++VL+ R L 
Sbjct: 7   QEAKVQMQKSLEALGINFNKIRTGRAHPSILDGIKVDYYGSDTPLSQVANISVLDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K++   +E+ I +S+LGLNP   G ++R+P+P  TEE R    K A + AE +KI
Sbjct: 67  ISPWEKQLTPQIEKAIMKSDLGLNPSTTGDLIRLPMPMLTEETRKNYTKQAKSEAESAKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN RRD + HLK   K  +  ED     +++IQKITD  + +IDS   +K+ +++  
Sbjct: 127 SVRNARRDALGHLKDLLKDKEIGEDDERRGQDEIQKITDKFVADIDSALADKETDLLKI 185


>gi|171463274|ref|YP_001797387.1| ribosome recycling factor [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238689053|sp|B1XTU6|RRF_POLNS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|171192812|gb|ACB43773.1| ribosome recycling factor [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 186

 Score =  236 bits (602), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 74/178 (41%), Positives = 118/178 (66%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N   +M  ++  LK +++ +R+GR +P +L+ + V+ YG+  PL+QVA++ + + R + V
Sbjct: 9   NANQKMEKSLEALKTNLVKVRSGRANPGILEHIHVDYYGNPTPLSQVASLGLADARTINV 68

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             ++K MVA++E+ I +S+LGLNP+ +G V+R+P+P  TEERR  L KV  +  E +KI+
Sbjct: 69  QPFEKTMVAAIEKAIRDSDLGLNPVSQGTVIRVPMPALTEERRRELTKVVKSEGEDAKIA 128

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRN+RRD  +HLK+  K  + SED      +DIQK+TD  + +ID    EK+KEIM  
Sbjct: 129 VRNLRRDANEHLKRLTKDKEISEDDERRATDDIQKMTDKAVIDIDKIIAEKEKEIMTV 186


>gi|25028466|ref|NP_738520.1| ribosome recycling factor [Corynebacterium efficiens YS-314]
 gi|259507526|ref|ZP_05750426.1| ribosome recycling factor [Corynebacterium efficiens YS-314]
 gi|29336541|sp|Q8FP75|RRF_COREF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|23493751|dbj|BAC18720.1| putative ribosome recycling factor [Corynebacterium efficiens
           YS-314]
 gi|259164911|gb|EEW49465.1| ribosome recycling factor [Corynebacterium efficiens YS-314]
          Length = 185

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM +T+   ++D++T+RTGR +P+M + V  E YG   P+ Q+++++V EPRML
Sbjct: 6   LFDSEERMSNTVEHTREDLITIRTGRANPAMFNGVLAEYYGVPTPITQMSSISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++   +  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A    E  K
Sbjct: 66  IIKPYEMSSMGVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMVKIAKGKGEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RR GM+ LKK +K G+  ED VA+ E ++ KIT   ++ +D     K+ E+M  
Sbjct: 126 IAIRNVRRKGMEQLKKLQKDGEFGEDEVAAAEKELDKITAHYVEQVDEIVARKEAELMEV 185


>gi|121594920|ref|YP_986816.1| ribosome recycling factor [Acidovorax sp. JS42]
 gi|222110429|ref|YP_002552693.1| ribosome recycling factor [Acidovorax ebreus TPSY]
 gi|166230405|sp|A1W915|RRF_ACISJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809509|sp|B9MGM0|RRF_DIAST RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120607000|gb|ABM42740.1| ribosome recycling factor [Acidovorax sp. JS42]
 gi|221729873|gb|ACM32693.1| ribosome recycling factor [Acidovorax ebreus TPSY]
          Length = 186

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 77/184 (41%), Positives = 117/184 (63%), Gaps = 1/184 (0%)

Query: 4   VIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + D++   + +M  +I+  K ++  +RTGR +P +LD + VE YGS VPL+QVANV +L+
Sbjct: 3   IADIKKTTEAKMDQSIAAFKNNLAKIRTGRANPQLLDTIHVEYYGSMVPLSQVANVALLD 62

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R + V  W+K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A +  
Sbjct: 63  ARTISVQPWEKNMGAKIEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARSEG 122

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E +K+++RN+RRD  + +KK  K   ASED     E D+QK TD  I  ID+    K++E
Sbjct: 123 EGAKVAIRNLRRDANEGVKKLVKDKLASEDDQKRAEADVQKTTDKHIAEIDALVAAKEQE 182

Query: 183 IMHF 186
           IM  
Sbjct: 183 IMAI 186


>gi|50842996|ref|YP_056223.1| ribosome recycling factor [Propionibacterium acnes KPA171202]
 gi|289426460|ref|ZP_06428203.1| ribosome recycling factor [Propionibacterium acnes SK187]
 gi|289428643|ref|ZP_06430326.1| ribosome recycling factor [Propionibacterium acnes J165]
 gi|295131067|ref|YP_003581730.1| ribosome recycling factor [Propionibacterium acnes SK137]
 gi|60390690|sp|Q6A7K0|RRF_PROAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|50840598|gb|AAT83265.1| ribosome recycling factor [Propionibacterium acnes KPA171202]
 gi|289153188|gb|EFD01906.1| ribosome recycling factor [Propionibacterium acnes SK187]
 gi|289158041|gb|EFD06261.1| ribosome recycling factor [Propionibacterium acnes J165]
 gi|291377325|gb|ADE01180.1| ribosome recycling factor [Propionibacterium acnes SK137]
 gi|313763566|gb|EFS34930.1| ribosome recycling factor [Propionibacterium acnes HL013PA1]
 gi|313773505|gb|EFS39471.1| ribosome recycling factor [Propionibacterium acnes HL074PA1]
 gi|313793959|gb|EFS41983.1| ribosome recycling factor [Propionibacterium acnes HL110PA1]
 gi|313801346|gb|EFS42597.1| ribosome recycling factor [Propionibacterium acnes HL110PA2]
 gi|313807974|gb|EFS46455.1| ribosome recycling factor [Propionibacterium acnes HL087PA2]
 gi|313811557|gb|EFS49271.1| ribosome recycling factor [Propionibacterium acnes HL083PA1]
 gi|313816746|gb|EFS54460.1| ribosome recycling factor [Propionibacterium acnes HL059PA1]
 gi|313819543|gb|EFS57257.1| ribosome recycling factor [Propionibacterium acnes HL046PA2]
 gi|313822134|gb|EFS59848.1| ribosome recycling factor [Propionibacterium acnes HL036PA1]
 gi|313823632|gb|EFS61346.1| ribosome recycling factor [Propionibacterium acnes HL036PA2]
 gi|313825956|gb|EFS63670.1| ribosome recycling factor [Propionibacterium acnes HL063PA1]
 gi|313829423|gb|EFS67137.1| ribosome recycling factor [Propionibacterium acnes HL063PA2]
 gi|313831297|gb|EFS69011.1| ribosome recycling factor [Propionibacterium acnes HL007PA1]
 gi|313834908|gb|EFS72622.1| ribosome recycling factor [Propionibacterium acnes HL056PA1]
 gi|313839933|gb|EFS77647.1| ribosome recycling factor [Propionibacterium acnes HL086PA1]
 gi|314914720|gb|EFS78551.1| ribosome recycling factor [Propionibacterium acnes HL005PA4]
 gi|314919318|gb|EFS83149.1| ribosome recycling factor [Propionibacterium acnes HL050PA1]
 gi|314920772|gb|EFS84603.1| ribosome recycling factor [Propionibacterium acnes HL050PA3]
 gi|314924719|gb|EFS88550.1| ribosome recycling factor [Propionibacterium acnes HL036PA3]
 gi|314930451|gb|EFS94282.1| ribosome recycling factor [Propionibacterium acnes HL067PA1]
 gi|314954392|gb|EFS98798.1| ribosome recycling factor [Propionibacterium acnes HL027PA1]
 gi|314957475|gb|EFT01578.1| ribosome recycling factor [Propionibacterium acnes HL002PA1]
 gi|314962110|gb|EFT06211.1| ribosome recycling factor [Propionibacterium acnes HL002PA2]
 gi|314963689|gb|EFT07789.1| ribosome recycling factor [Propionibacterium acnes HL082PA1]
 gi|314968483|gb|EFT12581.1| ribosome recycling factor [Propionibacterium acnes HL037PA1]
 gi|314974173|gb|EFT18269.1| ribosome recycling factor [Propionibacterium acnes HL053PA1]
 gi|314976537|gb|EFT20632.1| ribosome recycling factor [Propionibacterium acnes HL045PA1]
 gi|314978900|gb|EFT22994.1| ribosome recycling factor [Propionibacterium acnes HL072PA2]
 gi|314984356|gb|EFT28448.1| ribosome recycling factor [Propionibacterium acnes HL005PA1]
 gi|314986546|gb|EFT30638.1| ribosome recycling factor [Propionibacterium acnes HL005PA2]
 gi|314990905|gb|EFT34996.1| ribosome recycling factor [Propionibacterium acnes HL005PA3]
 gi|315079539|gb|EFT51532.1| ribosome recycling factor [Propionibacterium acnes HL053PA2]
 gi|315081233|gb|EFT53209.1| ribosome recycling factor [Propionibacterium acnes HL078PA1]
 gi|315083599|gb|EFT55575.1| ribosome recycling factor [Propionibacterium acnes HL027PA2]
 gi|315087116|gb|EFT59092.1| ribosome recycling factor [Propionibacterium acnes HL002PA3]
 gi|315089289|gb|EFT61265.1| ribosome recycling factor [Propionibacterium acnes HL072PA1]
 gi|315095312|gb|EFT67288.1| ribosome recycling factor [Propionibacterium acnes HL038PA1]
 gi|315099193|gb|EFT71169.1| ribosome recycling factor [Propionibacterium acnes HL059PA2]
 gi|315100324|gb|EFT72300.1| ribosome recycling factor [Propionibacterium acnes HL046PA1]
 gi|315106750|gb|EFT78726.1| ribosome recycling factor [Propionibacterium acnes HL030PA1]
 gi|315108992|gb|EFT80968.1| ribosome recycling factor [Propionibacterium acnes HL030PA2]
 gi|327328425|gb|EGE70187.1| ribosome recycling factor [Propionibacterium acnes HL096PA2]
 gi|327329709|gb|EGE71465.1| ribosome recycling factor [Propionibacterium acnes HL096PA3]
 gi|327444212|gb|EGE90866.1| ribosome recycling factor [Propionibacterium acnes HL043PA2]
 gi|327444909|gb|EGE91563.1| ribosome recycling factor [Propionibacterium acnes HL043PA1]
 gi|327446394|gb|EGE93048.1| ribosome recycling factor [Propionibacterium acnes HL013PA2]
 gi|327452018|gb|EGE98672.1| ribosome recycling factor [Propionibacterium acnes HL092PA1]
 gi|327454945|gb|EGF01600.1| ribosome recycling factor [Propionibacterium acnes HL087PA3]
 gi|327457769|gb|EGF04424.1| ribosome recycling factor [Propionibacterium acnes HL083PA2]
 gi|328752149|gb|EGF65765.1| ribosome recycling factor [Propionibacterium acnes HL020PA1]
 gi|328755222|gb|EGF68838.1| ribosome recycling factor [Propionibacterium acnes HL087PA1]
 gi|328758299|gb|EGF71915.1| ribosome recycling factor [Propionibacterium acnes HL025PA2]
 gi|328760030|gb|EGF73611.1| ribosome recycling factor [Propionibacterium acnes HL099PA1]
 gi|332675946|gb|AEE72762.1| ribosome-recycling factor [Propionibacterium acnes 266]
          Length = 184

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ + +MG  +   +++   +RTGR +P+M + + VE YG+  PL Q+A+  V
Sbjct: 1   MSDII--KDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R ++++ +DK  V  VE+ I +S+LG+NP  +G V+R  +P  TEERR   +K+A  
Sbjct: 59  PEARTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKT 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ +I+VRN+RR   D +KK  K  + SED +  LE ++ ++T   ++ ID   + K+
Sbjct: 119 KAEEGRIAVRNVRRASNDVVKKQEKDKEISEDEMTRLEKELDQVTRKYVEQIDELLKSKE 178

Query: 181 KEIMHF 186
            E++  
Sbjct: 179 SELLEI 184


>gi|300780937|ref|ZP_07090791.1| ribosome recycling factor [Corynebacterium genitalium ATCC 33030]
 gi|300532644|gb|EFK53705.1| ribosome recycling factor [Corynebacterium genitalium ATCC 33030]
          Length = 185

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM +++   + +++T+RTGR +P+M + V  E YG+  P+NQ+A ++V EPRML
Sbjct: 6   LLDAEERMTNSVEHTRGELVTIRTGRANPAMFNSVMAEFYGAPTPINQMATISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +  +E  I  S+LG+NP  +GQV+R+ +P+ TEERR  LVK A    E  K
Sbjct: 66  LIKPYDPSTMGEIENAIRNSDLGVNPTDDGQVIRVTIPQLTEERRRDLVKQAKGKGEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RR GMD LKK +K G A ED V++ E ++ K T   +  ID    +K+ E++  
Sbjct: 126 IAIRNVRRSGMDALKKIQKDGDAGEDEVSAAEKELDKTTAKYVDMIDDLVNKKEAELLEV 185


>gi|302038069|ref|YP_003798391.1| ribosome recycling factor [Candidatus Nitrospira defluvii]
 gi|300606133|emb|CBK42466.1| Ribosome recycling factor [Candidatus Nitrospira defluvii]
          Length = 187

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q + ++M   I  LK+D+  LRTGR S +++D ++V+ YG+  PL QVANV   E R++ 
Sbjct: 9   QRVTEKMDHAIEHLKRDLAGLRTGRASVALVDGIRVDYYGTMTPLKQVANVATPEARLIT 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  W++ ++  +E+ I  S+LGL P  +G+++RIP+P  TEERR  L+KV   + E+ K+
Sbjct: 69  IQPWEQNLIREIEKAIQTSDLGLTPSNDGKLIRIPLPPLTEERRKELIKVCKKHGEEVKV 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +R  RRDG + LKK +K  K +ED +   E +IQK+TD  ++ ID   ++K+ EI+  
Sbjct: 129 QIRGFRRDGNEELKKLQKDTKLTEDELRKSEAEIQKLTDQYVQKIDDVMKKKEGEILEV 187


>gi|120610506|ref|YP_970184.1| ribosome recycling factor [Acidovorax citrulli AAC00-1]
 gi|166230402|sp|A1TN72|RRF_ACIAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120588970|gb|ABM32410.1| ribosome recycling factor [Acidovorax citrulli AAC00-1]
          Length = 186

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  +I   K ++  +RTGR +P++LD V+VE YGS VPL+QVANV++++ R + 
Sbjct: 8   KNTEAKMDQSIVAFKNNLAKIRTGRANPALLDSVQVEYYGSMVPLSQVANVSLIDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A +E+ I ES LGLNP   G ++R+P+P  +EERR  + K+A    E +K+
Sbjct: 68  VQPWEKGMGAKIEKAIRESELGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + +KK  K   ASED     E DIQK+TD  I  +D+    K++EIM  
Sbjct: 128 AVRNLRRDANESVKKLVKDKLASEDEQKRAEADIQKVTDKHIAEVDALVAAKEQEIMAV 186


>gi|167759673|ref|ZP_02431800.1| hypothetical protein CLOSCI_02032 [Clostridium scindens ATCC 35704]
 gi|167662704|gb|EDS06834.1| hypothetical protein CLOSCI_02032 [Clostridium scindens ATCC 35704]
          Length = 183

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 80/186 (43%), Positives = 121/186 (65%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+   LQ  +D+M  T++ L+ D+ T+R GR +P++L+ + V+ YG+  P+ QV NV+V
Sbjct: 1   MNER--LQVYEDKMKKTMASLESDLATIRAGRANPNVLNKIMVDYYGTPTPIQQVGNVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+++  W+K MV ++E+ I  S LG+NP  +G  +R+  PE TEERR  LVK    
Sbjct: 59  PEPRMILIQPWEKSMVKAIEKAIQTSELGINPTNDGSAIRLVFPELTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+++RNIRRDG D LKK  K  + SED +  +E ++QK+TD  +K +D   E K 
Sbjct: 119 KGEGAKVAIRNIRRDGNDALKKL-KGSEVSEDEIKDMEEELQKVTDKFVKKVDEAVEAKS 177

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 178 KEVMTV 183


>gi|121998245|ref|YP_001003032.1| ribosome recycling factor [Halorhodospira halophila SL1]
 gi|166230792|sp|A1WX18|RRF_HALHL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|121589650|gb|ABM62230.1| ribosome recycling factor [Halorhodospira halophila SL1]
          Length = 185

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM   +  LK D+  LRTGR   S+LD V VE YG  VP+ Q ANV+V + R L 
Sbjct: 7   EDADRRMAKAVESLKHDLARLRTGRAHTSLLDQVNVEYYGMEVPIKQAANVSVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ ++K MV ++E+ I  SNLGL+P+  GQV+R+P+P  TE+RR  +V++    AE++++
Sbjct: 67  VTPFEKHMVPAIEKAIMASNLGLSPVSAGQVIRVPLPSLTEDRRKEMVRLVKNEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD    LK   K    +ED     +  IQK+TD  +  +D   EEK++E+M  
Sbjct: 127 AIRNVRRDANSDLKDLAKGKDITEDEERRAQEAIQKLTDRYVAQVDDLLEEKERELMEV 185


>gi|282854667|ref|ZP_06264002.1| ribosome recycling factor [Propionibacterium acnes J139]
 gi|282582249|gb|EFB87631.1| ribosome recycling factor [Propionibacterium acnes J139]
 gi|314923764|gb|EFS87595.1| ribosome recycling factor [Propionibacterium acnes HL001PA1]
 gi|314966222|gb|EFT10321.1| ribosome recycling factor [Propionibacterium acnes HL082PA2]
 gi|314981988|gb|EFT26081.1| ribosome recycling factor [Propionibacterium acnes HL110PA3]
 gi|315090899|gb|EFT62875.1| ribosome recycling factor [Propionibacterium acnes HL110PA4]
 gi|315095112|gb|EFT67088.1| ribosome recycling factor [Propionibacterium acnes HL060PA1]
 gi|315104341|gb|EFT76317.1| ribosome recycling factor [Propionibacterium acnes HL050PA2]
 gi|327328110|gb|EGE69879.1| ribosome recycling factor [Propionibacterium acnes HL103PA1]
          Length = 184

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 113/186 (60%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ + +MG  +   +++   +RTGR +P+M + + VE YG+  PL Q+A+  V
Sbjct: 1   MSDII--KDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R ++++ +DK  V  VE+ I +S+LG+NP  +G V+R  +P  TEERR   +K+A  
Sbjct: 59  PEARTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKT 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ +I+VRN+RR   D +KK  K    SED +  LE ++ ++T   ++ ID   + K+
Sbjct: 119 KAEEGRIAVRNVRRASNDVVKKQEKDKDISEDEMTRLEKELDQVTRKYVEQIDELLKSKE 178

Query: 181 KEIMHF 186
            E++  
Sbjct: 179 SELLEI 184


>gi|296136576|ref|YP_003643818.1| ribosome recycling factor [Thiomonas intermedia K12]
 gi|295796698|gb|ADG31488.1| ribosome recycling factor [Thiomonas intermedia K12]
          Length = 186

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N +++M  +I  LK D+  +RTGR    +LD V V+ YG+ + +NQVAN+ +++ R + 
Sbjct: 8   KNTEEKMHKSIESLKLDLAKVRTGRAHTGLLDHVMVDYYGTMMAINQVANMNLVDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I ES+LGLNP  +G ++R+P+P  TEERR  LVKV     E +K+
Sbjct: 68  VQPWEKKMVQAVEKAIRESDLGLNPQTQGDIIRVPMPALTEERRRDLVKVIKQEGEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD    LK   K+ + SED     ++++QKITD  I  ID    +K+ EIM  
Sbjct: 128 AVRNLRRDANQSLKDLVKAKEISEDDERRAQDEVQKITDRCIAEIDKQLAQKEAEIMAV 186


>gi|294140006|ref|YP_003555984.1| ribosome recycling factor [Shewanella violacea DSS12]
 gi|293326475|dbj|BAJ01206.1| ribosome recycling factor [Shewanella violacea DSS12]
          Length = 185

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 85/178 (47%), Positives = 111/178 (62%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + + RM   I   K  M  +RTGR  PS+LD +KV  YGS  PL QV NVT+ + R L V
Sbjct: 8   DAQTRMAKCIEATKTQMAKVRTGRAHPSLLDSIKVSYYGSMTPLKQVGNVTIEDSRTLAV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           SV+D  M+ +VE+ I  S+LGLNP+  G V+RIP+P  TEERR  L+KV  A AE S+IS
Sbjct: 68  SVFDATMIQAVEKAIMSSDLGLNPMSAGAVIRIPLPSLTEERRKDLIKVVRAEAENSRIS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRN+RRD    +K   K  + +ED V   E++IQK TD+ IK ID     K+ E+M  
Sbjct: 128 VRNVRRDANSEIKALEKEKECTEDDVHRTEDEIQKFTDAHIKQIDELLSAKEAELMEV 185


>gi|254462306|ref|ZP_05075722.1| ribosome recycling factor [Rhodobacterales bacterium HTCC2083]
 gi|206678895|gb|EDZ43382.1| ribosome recycling factor [Rhodobacteraceae bacterium HTCC2083]
          Length = 187

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 87/185 (47%), Positives = 125/185 (67%), Gaps = 1/185 (0%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++D  ++  RM   ++ LK +  +LRTGR S SML+ V V+AYGS  P+NQV  V V 
Sbjct: 4   DFMLDTDDLHRRMDGAMANLKTEFASLRTGRASGSMLEPVMVDAYGSMTPINQVGTVNVP 63

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPRM+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y
Sbjct: 64  EPRMVTINVWDKGLVQKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAAQY 123

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E +++SVRN+RRDGMD +KK++  G  SED     E ++Q++TD+ IK +D+  E K+K
Sbjct: 124 TESARVSVRNVRRDGMDQIKKAKNDG-LSEDDQKFWEAEVQELTDAAIKAVDAALEVKQK 182

Query: 182 EIMHF 186
           EIM  
Sbjct: 183 EIMQV 187


>gi|152999980|ref|YP_001365661.1| ribosome recycling factor [Shewanella baltica OS185]
 gi|160874601|ref|YP_001553917.1| ribosome recycling factor [Shewanella baltica OS195]
 gi|166231225|sp|A6WLA9|RRF_SHEB8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044074|sp|A9KUK8|RRF_SHEB9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151364598|gb|ABS07598.1| ribosome recycling factor [Shewanella baltica OS185]
 gi|160860123|gb|ABX48657.1| ribosome recycling factor [Shewanella baltica OS195]
 gi|315266842|gb|ADT93695.1| ribosome recycling factor [Shewanella baltica OS678]
          Length = 185

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV V + R L 
Sbjct: 7   KDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVEDSRTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV    AE  +I
Sbjct: 67  VTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRNEAENGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +  +KK  K+   +ED V   E ++QK TD+ IK +D     K+ E+M  
Sbjct: 127 AIRNVRRDAISEVKKLEKAKACTEDDVRRSEEEVQKFTDAHIKKVDEILAAKEIELMEV 185


>gi|254427174|ref|ZP_05040881.1| ribosome recycling factor [Alcanivorax sp. DG881]
 gi|196193343|gb|EDX88302.1| ribosome recycling factor [Alcanivorax sp. DG881]
          Length = 185

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + + RM  ++  L   M  +RTGR  PS+LD + +E YG+  PLNQ+ N++V E R L 
Sbjct: 7   NDAQSRMKKSLEALDTAMKRVRTGRAHPSLLDNITIEYYGAETPLNQMGNISVEEGRTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S +DK ++  +ER I  S+LGLNP   G ++R+P+P  TEE R  LVKV  A AEK+++
Sbjct: 67  ISPFDKSLIPQIERAIMMSDLGLNPSTSGTLIRLPLPPLTEETRRDLVKVVRAEAEKARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD    LK+  K  + SED     E  IQ++TD  +  ++S  +EK++E+M  
Sbjct: 127 SVRNVRRDANGDLKELLKEKEISEDEQRRGEEQIQQLTDKMVAQVESVLKEKEEELMTV 185


>gi|184201268|ref|YP_001855475.1| ribosome recycling factor [Kocuria rhizophila DC2201]
 gi|238689218|sp|B2GKT3|RRF_KOCRD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|183581498|dbj|BAG29969.1| ribosome recycling factor [Kocuria rhizophila DC2201]
          Length = 185

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 61/178 (34%), Positives = 101/178 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +   RMG  +   K D  T+RTGR +P++   + V  YG+  PL Q+A+    E R L
Sbjct: 6   LSDATTRMGKAVDAAKTDFSTVRTGRANPALFSSLLVAYYGTPTPLQQLASFQTPEARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E+ + +S++G NP  +G V+R+ +PE TEERR   VK+ H  AE ++
Sbjct: 66  LITPYDRSALNDIEKALRDSDIGANPANDGNVIRVVMPELTEERRKEYVKIVHGKAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +SVRN+RR   + ++K  K G   ED     E D+   T   I  +D   + K+ E++
Sbjct: 126 VSVRNVRRHAKEAIEKLVKDGDVGEDDGKRGEKDLDAATKKHIDQVDELLKNKEAELL 183


>gi|16331151|ref|NP_441879.1| ribosome recycling factor [Synechocystis sp. PCC 6803]
 gi|3122780|sp|P74456|RRF_SYNY3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|1653645|dbj|BAA18557.1| ribosome releasing factor [Synechocystis sp. PCC 6803]
          Length = 182

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 68/177 (38%), Positives = 108/177 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  +KD M  ++   ++   T+RTGR + S+LD + VE YG+  PL  +A +   +   +
Sbjct: 3   LAELKDHMQKSVEATQRSFNTIRTGRANASLLDRITVEYYGAETPLKSLATIGTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   + ++E+ I  S+LGL P  +G+V+R+ +P  T ERR  LVKVA   AE+ K
Sbjct: 63  VIQPFDMGSIGTIEKAISLSDLGLTPNNDGKVIRLNIPPLTAERRKELVKVAGKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD +D ++K  K+   SED    L+ +IQK+TD + K ID     K+K+I
Sbjct: 123 VAIRNIRRDAVDEVRKQEKNSDISEDEARDLQEEIQKLTDQSTKRIDELLAAKEKDI 179


>gi|163856844|ref|YP_001631142.1| ribosome recycling factor [Bordetella petrii DSM 12804]
 gi|229564222|sp|A9INV3|RRF_BORPD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|163260572|emb|CAP42874.1| frr [Bordetella petrii]
          Length = 186

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  LK ++  +RTGR    +LD V+VE YGS VP++QVANV +++ R + 
Sbjct: 8   KSAETRMAKSLDTLKVNLSKIRTGRAHTGILDHVQVEYYGSPVPVSQVANVNLVDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K M A++E+ I ES+LGLNP+  G  +R+P+P  TEERR  L KV     E +KI
Sbjct: 68  VQPYEKPMAAAIEKAIRESDLGLNPMSLGDSIRVPMPALTEERRRDLTKVVKGEGEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RR+  + LKK  K  + SED     ++DIQK+TD  +  ID    +K+ EIM  
Sbjct: 128 AVRNLRREANESLKKLVKDKEISEDDERRAQDDIQKLTDRNVTEIDKLITQKEAEIMTV 186


>gi|300023426|ref|YP_003756037.1| ribosome recycling factor [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525247|gb|ADJ23716.1| ribosome recycling factor [Hyphomicrobium denitrificans ATCC 51888]
          Length = 187

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 90/178 (50%), Positives = 126/178 (70%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D+  ++ RM  ++  LK++   LRTGR S ++LD V+V  YGS +PLNQVA V+V EPRM
Sbjct: 7   DINEVEKRMRASLDALKREFSGLRTGRASANLLDPVQVMVYGSRMPLNQVATVSVPEPRM 66

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + V VWD+  V +V++GI E+NLGLNPI++GQ+LR+P+P  T +RR  LVK+AH YAE+S
Sbjct: 67  ISVQVWDRSNVTAVDKGIREANLGLNPIMDGQILRLPIPSLTADRRQELVKLAHKYAEQS 126

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K++VRN+RR+ MD LKK  K GK S+D        +Q++TD  IK +DS    K+ EI
Sbjct: 127 KVAVRNVRREAMDLLKKLEKDGKMSQDDHRGHSEKVQELTDRIIKEVDSTLVTKEAEI 184


>gi|88857974|ref|ZP_01132616.1| ribosome releasing factor [Pseudoalteromonas tunicata D2]
 gi|88819591|gb|EAR29404.1| ribosome releasing factor [Pseudoalteromonas tunicata D2]
          Length = 185

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N   RM  ++  L   +  +RTGR  PS+LD +KV  YG+  PLNQVANV+V + R L 
Sbjct: 7   KNAATRMQKSVEALVSQLSKIRTGRAHPSLLDGLKVMYYGAETPLNQVANVSVEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +SV+DK +  +VE+ I  S+LGLNP+  G ++R+P+P  TEERR  L+KV  A AE  ++
Sbjct: 67  ISVFDKSLGQAVEKAILASDLGLNPMSSGMMIRVPLPPLTEERRKDLIKVVRAEAEAGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K    SED     +++IQK+TD  IK++D+    K+ E+M  
Sbjct: 127 AIRNIRRDANADVKALLKDKAISEDEQRKSDDEIQKLTDKFIKDLDAKLAVKEAELMEI 185


>gi|315651639|ref|ZP_07904650.1| ribosome recycling factor [Eubacterium saburreum DSM 3986]
 gi|315486093|gb|EFU76464.1| ribosome recycling factor [Eubacterium saburreum DSM 3986]
          Length = 184

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 77/181 (42%), Positives = 118/181 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
            ++  +D+M  +I  L ++  ++R GR +P +LD +KVE YG+  P+ QV N++V EPR+
Sbjct: 4   SIKKFEDKMTKSIDVLLEEYASIRAGRANPHVLDRIKVEYYGTPTPIQQVGNISVPEPRI 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + +S W+K ++  +E+ I+ S+LG+NP  +G  +R+  PE TEERR  LVK      E  
Sbjct: 64  IQISPWEKSLLKEIEKAINMSDLGINPTNDGSCIRLVFPELTEERRKELVKDVKKKGEAC 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K++VRNIRRD +D +KK  K+G+ +ED V   EN IQKITD  I+ +D   E+K KEI+ 
Sbjct: 124 KVAVRNIRRDAIDAVKKLEKAGEFTEDDVKDGENKIQKITDKAIERVDKAIEDKSKEILT 183

Query: 186 F 186
            
Sbjct: 184 V 184


>gi|295100640|emb|CBK98185.1| ribosome recycling factor [Faecalibacterium prausnitzii L2-6]
          Length = 184

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 75/181 (41%), Positives = 120/181 (66%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           + +  +D+M   +  L++++ T+R GR +P +LD V V+ YGS  P+ QVA+V V E R 
Sbjct: 4   NTKAFEDKMKSAVEHLERELKTVRAGRANPGVLDKVTVDYYGSPTPIQQVASVAVSEART 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L ++ WD+ ++ ++ + I  S++G+NPI +GQ +R+  P  TEERR  L K      E++
Sbjct: 64  LTITPWDRTLLRAISKAILASDVGINPIDDGQTIRLNFPAPTEERRKQLAKEVSKMGEEA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K++VRN+RRD MD  K  +K+G+ +ED   ++E D+QK+TD  +KNID+  EEK+KEIM 
Sbjct: 124 KVAVRNVRRDAMDKAKAMKKAGELTEDTQKTMEEDVQKLTDKYVKNIDAAVEEKQKEIMS 183

Query: 186 F 186
            
Sbjct: 184 V 184


>gi|222151092|ref|YP_002560246.1| ribosome recycling factor [Macrococcus caseolyticus JCSC5402]
 gi|254809518|sp|B9EBD9|RRF_MACCJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|222120215|dbj|BAH17550.1| ribosome recycling factor [Macrococcus caseolyticus JCSC5402]
          Length = 185

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +K +M  +I  L++D   +R G  + ++LD V V  YG+  P+ Q+A ++V EPRML
Sbjct: 6   MNELKSKMEKSIESLQRDFAAIRAGHANANLLDRVSVVYYGAETPVQQLAGISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  + + I+ +NLG+NP  +G V+RI VP  TEERR  LVK A   AE SK
Sbjct: 66  LVTPYDKTSIDDILKAINMANLGVNPTSDGNVIRITVPALTEERRKELVKEAKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  D LKK+ K+G  +ED + S  +D+Q  TD  IK ID     K+K+I+  
Sbjct: 126 IAIRNIRRDANDALKKAEKAGDITEDDLKSFSDDVQAETDKFIKKIDELTASKEKDILEV 185


>gi|158520494|ref|YP_001528364.1| ribosome recycling factor [Desulfococcus oleovorans Hxd3]
 gi|238686879|sp|A8ZTM3|RRF_DESOH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|158509320|gb|ABW66287.1| ribosome recycling factor [Desulfococcus oleovorans Hxd3]
          Length = 185

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + I+++MG T+   K D+  +RTGR S ++LD + V+ YG+  PLNQ+A+++V E R++V
Sbjct: 7   EEIEEKMGKTLEVFKNDLKKVRTGRASLALLDGIVVDYYGTPTPLNQLASLSVPESRLIV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD   +  VE+ I ++N+ L P  +G+V+R+ +P  TE+RR  + K  +  AE+ K+
Sbjct: 67  IQPWDATAIKDVEKAILQANIDLTPSNDGKVIRLSIPPLTEDRRKEIAKRVNQMAEEHKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  + LK+ +K G  SED   + ++ +QK+TD  I+ ID  F+ K+KEI+  
Sbjct: 127 AMRNIRRDANETLKQMKKDGDISEDESFAGKDKVQKVTDGYIERIDEVFKAKEKEILEL 185


>gi|126173691|ref|YP_001049840.1| ribosome recycling factor [Shewanella baltica OS155]
 gi|217974057|ref|YP_002358808.1| ribosome recycling factor [Shewanella baltica OS223]
 gi|304409565|ref|ZP_07391185.1| ribosome recycling factor [Shewanella baltica OS183]
 gi|307303923|ref|ZP_07583676.1| ribosome recycling factor [Shewanella baltica BA175]
 gi|166231224|sp|A3D2K8|RRF_SHEB5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809529|sp|B8E7R3|RRF_SHEB2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|125996896|gb|ABN60971.1| ribosome recycling factor [Shewanella baltica OS155]
 gi|217499192|gb|ACK47385.1| ribosome recycling factor [Shewanella baltica OS223]
 gi|304352083|gb|EFM16481.1| ribosome recycling factor [Shewanella baltica OS183]
 gi|306912821|gb|EFN43244.1| ribosome recycling factor [Shewanella baltica BA175]
          Length = 185

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG  +   K  M  +RTGR  PS+LD ++V  YG+  PLNQVANV V + R L 
Sbjct: 7   KDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVEDSRTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D+  + +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV    AE  +I
Sbjct: 67  VTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRNEAENGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +  +KK  K+   +ED V   E ++QK TD+ IK ID     K+ E+M  
Sbjct: 127 AIRNVRRDAISEVKKLEKAKACTEDDVRRSEEEVQKFTDAHIKKIDEILAAKEIELMEV 185


>gi|30249677|ref|NP_841747.1| ribosome recycling factor [Nitrosomonas europaea ATCC 19718]
 gi|34924908|sp|Q82TZ8|RRF_NITEU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|30180714|emb|CAD85626.1| Ribosome recycling factor [Nitrosomonas europaea ATCC 19718]
          Length = 185

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  ++  LK D   +R+GR    +LD + V+ YG+  P+ Q+ANVT+ + R + 
Sbjct: 7   KSAEQKMQKSLDALKVDFSKVRSGRPHTGLLDHIMVDYYGTPTPIKQLANVTLADARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK++ +++E+ I +S+LGLNP+    ++R+P+P  TEERR  L K+    AE +++
Sbjct: 67  IIPWDKKIFSAIEKAIRDSDLGLNPMTVSDMVRVPMPPLTEERRKDLTKIVKTEAEAARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD   HLK+  K    +ED     +++IQK+TD  I  +D   + K+ E+M  
Sbjct: 127 AMRNIRRDANAHLKELLKDKLIAEDEDRRAQDEIQKLTDRYIAEVDKLLQTKEAELMAV 185


>gi|320450765|ref|YP_004202861.1| ribosome recycling factor [Thermus scotoductus SA-01]
 gi|320150934|gb|ADW22312.1| ribosome recycling factor [Thermus scotoductus SA-01]
          Length = 185

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 78/177 (44%), Positives = 113/177 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              +  M  ++  L+ ++  LRTGR +P++L  +KVE YG+HVPLNQ+A VT  + + LV
Sbjct: 8   AETRAHMQKSLEALEHNLAGLRTGRANPALLLHLKVEYYGTHVPLNQIATVTAPDAKTLV 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WD+  + ++E+ I +S+LGLNP  +G  L I +P  TEERR  LVK A  YAE+ +I
Sbjct: 68  VQSWDQNALKAIEKAIRDSDLGLNPANKGDALYINIPPLTEERRKELVKTARHYAEEGRI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RNIRR+ ++ LKK  K    SED     E +IQKITD  I   D   E+K++EI+
Sbjct: 128 AIRNIRREALEKLKKLSKELHLSEDDTKRAEAEIQKITDEFIAKADELLEKKEQEIL 184


>gi|125973518|ref|YP_001037428.1| ribosome recycling factor [Clostridium thermocellum ATCC 27405]
 gi|190360240|sp|A3DE56|RRF_CLOTH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|125713743|gb|ABN52235.1| ribosome recycling factor [Clostridium thermocellum ATCC 27405]
          Length = 183

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 122/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +NI+++M  T+S LK ++ T+R GR + ++LD + V+ YG   P+NQ+  ++V EPR++V
Sbjct: 5   KNIEEKMKKTVSVLKDELNTVRAGRANAAILDRITVDYYGVPTPINQLGTISVPEPRVIV 64

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD +++  +E+ I +S++G+NP  +G+V+R+  P  TEERR  L K+A  Y E +K+
Sbjct: 65  IQPWDAQILKEIEKEIQKSDIGINPNNDGKVIRLVFPPLTEERRKELTKLAKKYGEDAKV 124

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++R+IRRDG++  K  +K+G+ +ED + S E DIQ +TD  I  ID   E K+KEI+  
Sbjct: 125 AIRSIRRDGIEKKKAMKKNGEITEDDLKSAEKDIQNLTDKYIAEIDKLIEIKEKEILEV 183


>gi|94500625|ref|ZP_01307155.1| ribosome recycling factor [Oceanobacter sp. RED65]
 gi|94427180|gb|EAT12160.1| ribosome recycling factor [Oceanobacter sp. RED65]
          Length = 185

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  +++ + +    +RTGR  PS+LD + V+ YG+  P+NQ+ANV V + R L 
Sbjct: 7   KDAEERMKKSLAAMIEAFKKVRTGRAHPSLLDGINVDYYGNPTPINQLANVNVEDGRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K +V  +E+ I +S+LG+ P   G+ +R+P+P  TEE R   +K A A AEK ++
Sbjct: 67  ITPWEKPLVPEIEKAIMKSDLGITPATSGETIRVPMPMLTEETRKGFIKQARAEAEKGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD    +K   K  + SED     EN+IQK+TD  I ++DS   EK+K++M  
Sbjct: 127 SIRNVRRDANSSVKDLLKEKEISEDEERQAENEIQKLTDKFIADVDSLLVEKEKDLMQV 185


>gi|166365795|ref|YP_001658068.1| ribosome recycling factor [Microcystis aeruginosa NIES-843]
 gi|189044061|sp|B0JKT7|RRF_MICAN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166088168|dbj|BAG02876.1| ribosome releasing factor [Microcystis aeruginosa NIES-843]
          Length = 182

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++D+M  T+   ++   T+RTGR + S+LD + VE YG   PL  +A ++  +   +
Sbjct: 3   LAEVQDQMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  + ++E+ I  S++GL P  +GQ +R+ +P  T +RR  LVK+A   AE+ K
Sbjct: 63  AIQPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +D ++K  K  + SED    L++ +QK TD  I  I+     K+K+IM  
Sbjct: 123 VAIRNIRRDAIDAIRKREKGHEISEDESRDLQDQVQKSTDKFIAKIEDLLTTKEKDIMTV 182


>gi|72161083|ref|YP_288740.1| ribosome recycling factor [Thermobifida fusca YX]
 gi|123630034|sp|Q47S50|RRF_THEFY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|71914815|gb|AAZ54717.1| ribosome recycling factor [Thermobifida fusca YX]
          Length = 185

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D  ++RTGR SP+    + VE YG+  P+NQ+A+  V EPRM+
Sbjct: 6   LLEAEEKMEKAVLVTKEDFASIRTGRPSPATFSRITVEYYGAMTPVNQLASFQVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  + ++E+ I ES+LG+NP  +G ++R+  PE +EERR   VKVA   AE  +
Sbjct: 66  IISPYDKAAMPAIEKAIRESDLGVNPSNDGNIIRVVFPELSEERRKEYVKVARNKAEDGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            SVRN+RR   D + K+ K+G+  ED     + ++  +T   +  ID   + K+ E++  
Sbjct: 126 TSVRNVRRQAKDAIDKAVKAGEIGEDEGHRAQKELDALTQKYVGEIDELLKHKESELLEV 185


>gi|302558125|ref|ZP_07310467.1| ribosome recycling factor [Streptomyces griseoflavus Tu4000]
 gi|302475743|gb|EFL38836.1| ribosome recycling factor [Streptomyces griseoflavus Tu4000]
          Length = 185

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA A AE +K
Sbjct: 66  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRRDYIKVAKAKAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 126 VSIRSVRRKAKDAIDKMIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|329936702|ref|ZP_08286409.1| ribosome recycling factor [Streptomyces griseoaurantiacus M045]
 gi|329303932|gb|EGG47815.1| ribosome recycling factor [Streptomyces griseoaurantiacus M045]
          Length = 185

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +K
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREYIKVAKTKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 126 ISIRSVRRKAKDAIDKLIKDGEIGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|319943823|ref|ZP_08018104.1| ribosome recycling factor [Lautropia mirabilis ATCC 51599]
 gi|319743056|gb|EFV95462.1| ribosome recycling factor [Lautropia mirabilis ATCC 51599]
          Length = 187

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M   I   +  +  +RTGR  P +LD + V+ YG+  P+NQVAN+++ + R L+
Sbjct: 9   KSAEQKMQKGIESFRNALSKIRTGRPHPGVLDHIHVDYYGTSTPINQVANISLADARTLL 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+VW+K M   VE+ I +S+LG+NP   G  +R+P+P  +EERR  +VKV     E +K+
Sbjct: 69  VNVWEKSMAVVVEKAIRDSDLGVNPQSMGTAIRVPMPPLSEERRREIVKVTKHEGEAAKV 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +R +RR+  D LK + K+ + SED     + DIQK TD  I  ID     K++EIM  
Sbjct: 129 VIRGVRREANDELKAAAKAKEISEDDERRGQEDIQKTTDRFIAEIDKLLAAKEQEIMTV 187


>gi|146281914|ref|YP_001172067.1| ribosome recycling factor [Pseudomonas stutzeri A1501]
 gi|145570119|gb|ABP79225.1| ribosome recycling factor [Pseudomonas stutzeri A1501]
          Length = 173

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 73/173 (42%), Positives = 102/173 (58%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+  L      +RTGR  PS+LD V V  YG+  PL QVANV   + R L ++V+DK
Sbjct: 1   MKKTLEALDHAFAKIRTGRAHPSILDSVMVSYYGADTPLRQVANVVAEDSRTLALTVFDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE ++++VRNIR
Sbjct: 61  SMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRKGYTKQARAEAENARVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD +  LK   K  + SED     ++D+QK+TD  +  ID   E K+ ++M  
Sbjct: 121 RDAIAQLKDLVKEKEISEDEERRGQDDVQKLTDKYVAEIDKALEGKEADLMAV 173


>gi|262039426|ref|ZP_06012733.1| ribosome recycling factor [Leptotrichia goodfellowii F0264]
 gi|261746562|gb|EEY34094.1| ribosome recycling factor [Leptotrichia goodfellowii F0264]
          Length = 185

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +DRM   +   K     +R GR S SMLD V VEAYG   PLNQV  V+  E R+L
Sbjct: 6   LKETEDRMHKALENTKDKFSHVRAGRASVSMLDGVSVEAYGVMTPLNQVGTVSAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK ++ ++E+ I ++NLG NP  +G+++R+ VPE TE+RR   VK+    AE+ K
Sbjct: 66  TIDPWDKSIIPAIEKVILQANLGFNPSNDGKIIRLVVPELTEDRRKEYVKLVKKEAEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+R+D  + ++K  K  + +ED + S E  +QK+TD  I  ID    +K+KE++  
Sbjct: 126 VAIRNVRKDVNNKIRKLEKDSEITEDELKSGEEKVQKMTDKFIAEIDDVLAKKEKELLKV 185


>gi|296171523|ref|ZP_06852787.1| ribosome recycling factor [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894085|gb|EFG73846.1| ribosome recycling factor [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 185

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  + D+ T+RTGR +P M   + ++ YG+  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVSVARDDLSTIRTGRANPGMFSRIVIDYYGATTPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A +  E ++
Sbjct: 66  VIKPYEASQLGAIENAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQAKSKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + RK G+A ED V   E ++ K T      ID   + K+ E++  
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKELDKATHQYTAQIDELVKHKEGELLEV 185


>gi|294340704|emb|CAZ89096.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Thiomonas sp. 3As]
          Length = 186

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N +++M  +I  LK D+  +RTGR    +LD V V+ YG+ + +NQVAN+ +++ R + 
Sbjct: 8   KNTEEKMHKSIESLKLDLAKVRTGRAHTGLLDHVMVDYYGTMMAINQVANMNLVDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MV +VE+ I ES+LGLNP  +G ++R+P+P  TEERR  LVKV     E +K+
Sbjct: 68  VQPWEKKMVQAVEKAIRESDLGLNPQTQGDIIRVPMPALTEERRRDLVKVIKQEGEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD    LK   K+ + SED     ++++QKITD  I  ID    +K+ EIM  
Sbjct: 128 AVRNLRRDANQSLKDLVKAKEVSEDDERRAQDEVQKITDRCIAEIDKQLAQKEAEIMAV 186


>gi|299823044|ref|ZP_07054930.1| ribosome recycling factor [Listeria grayi DSM 20601]
 gi|299816573|gb|EFI83811.1| ribosome recycling factor [Listeria grayi DSM 20601]
          Length = 185

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 80/185 (43%), Positives = 120/185 (64%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+VI     K RM      L K + T+R GR + S+LD + V+ YG+  P+NQ+A++++ 
Sbjct: 3   NEVI--TQSKARMEKAEHSLSKQLGTIRAGRANASLLDRITVDYYGAPTPINQIASISIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+LV++ +DK  +  VE+ I +S+LGL+P  +G VLR+ +P+ TEERR  LVK     
Sbjct: 61  EARLLVITPFDKNSLEDVEKAILKSDLGLSPNNDGTVLRLSIPQPTEERRRELVKEVKKE 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE++K+++RNIRRD  + LKK  KSG+ +ED + S   D+Q ITD +IK ID   + K+ 
Sbjct: 121 AEEAKVAIRNIRRDANEELKKLEKSGEITEDDLRSYGEDVQAITDESIKRIDEIAKNKEA 180

Query: 182 EIMHF 186
           EIM  
Sbjct: 181 EIMEV 185


>gi|255659930|ref|ZP_05405339.1| ribosome recycling factor [Mitsuokella multacida DSM 20544]
 gi|260847801|gb|EEX67808.1| ribosome recycling factor [Mitsuokella multacida DSM 20544]
          Length = 185

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM  +I  LK +  +LR GR +PS+LD V V  YG+  P+NQ+A VTV EPRM+
Sbjct: 6   LASHEERMKKSIEALKHEFASLRAGRATPSLLDKVMVNYYGAPTPVNQIAKVTVPEPRMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+K ++  +E  I +S+LGL+P  +G  +R+ +P  T+ERR  LVK  +   E++K
Sbjct: 66  MIQPWEKSILHDIEVAIMKSDLGLSPNSDGTAIRLSIPALTQERRQELVKTVNKKTEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRDG + +KK  K+ + +ED     +  +QK+ D  +K  D+  E K+KE+M  
Sbjct: 126 VALRNIRRDGNEDIKKLEKAKEITEDESKRGQESMQKLVDKYVKLADAAKEVKEKEVMEV 185


>gi|119386701|ref|YP_917756.1| ribosome recycling factor [Paracoccus denitrificans PD1222]
 gi|166230812|sp|A1B966|RRF_PARDP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119377296|gb|ABL72060.1| ribosome recycling factor [Paracoccus denitrificans PD1222]
          Length = 187

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 79/182 (43%), Positives = 119/182 (65%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  +++ RM   +  L+ +  +LRTGR S SM++ + V+AYGS  P+NQ+  V V EPR
Sbjct: 7   IDTDDLERRMKGAMESLRHEFASLRTGRASASMVEPIMVDAYGSPTPINQIGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ +++WDK +V   E+ I ES LG+NP + G ++ +P+PE  EERR  L +VA  YAE 
Sbjct: 67  MVTINIWDKGLVGKAEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTRVAAQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK+ KS   SED     E  +Q++TD  I ++D   E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKA-KSSGMSEDDQKFWEGAVQELTDKMIASVDQALEAKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|313836793|gb|EFS74507.1| ribosome recycling factor [Propionibacterium acnes HL037PA2]
 gi|314929799|gb|EFS93630.1| ribosome recycling factor [Propionibacterium acnes HL044PA1]
 gi|314972228|gb|EFT16325.1| ribosome recycling factor [Propionibacterium acnes HL037PA3]
 gi|328907655|gb|EGG27419.1| ribosome recycling factor [Propionibacterium sp. P08]
          Length = 184

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 66/186 (35%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ + +MG  +   +++   +RTGR +P+M + + VE YG+  PL Q+A+  V
Sbjct: 1   MSDII--KDAEKKMGSAVGHAREEFAAIRTGRANPAMFNKLMVEYYGTPTPLQQLASFQV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R ++++ +DK  V  VE+ I +S+LG+NP  +G V+R  +P  TEERR   +K+A  
Sbjct: 59  PEARTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKT 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ +I+VRNIRR   D +KK  K  + SED +  LE ++ ++T   ++ ID   + K+
Sbjct: 119 KAEEGRIAVRNIRRASNDVVKKQEKDKEISEDEMTRLEKELDQVTRKYVEQIDELLKSKE 178

Query: 181 KEIMHF 186
            E++  
Sbjct: 179 SELLEI 184


>gi|264679364|ref|YP_003279271.1| ribosome recycling factor [Comamonas testosteroni CNB-2]
 gi|299532323|ref|ZP_07045716.1| ribosome recycling factor [Comamonas testosteroni S44]
 gi|262209877|gb|ACY33975.1| ribosome recycling factor [Comamonas testosteroni CNB-2]
 gi|298719731|gb|EFI60695.1| ribosome recycling factor [Comamonas testosteroni S44]
          Length = 186

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +MG +I  LK ++  +RTGR +P++LD + VE YGS VPL+QVANV++L+ R + 
Sbjct: 8   KNTETKMGQSIEALKNNLARVRTGRANPALLDAIHVEYYGSMVPLSQVANVSLLDSRTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A VE+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E +KI
Sbjct: 68  VQPWEKNMAAKVEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGENAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + +KK  K  +ASED     E +IQKITD  I  +D+    K+++IM  
Sbjct: 128 AVRNLRRDANEGVKKLVKDKEASEDDQKRSEAEIQKITDKHIAEVDTLVAAKEQDIMAV 186


>gi|271963401|ref|YP_003337597.1| ribosome recycling factor [Streptosporangium roseum DSM 43021]
 gi|270506576|gb|ACZ84854.1| ribosome recycling factor [Streptosporangium roseum DSM 43021]
          Length = 185

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +S  K D   +RTGRV+PSM + +  E YG+  P+ Q+A+  V E RM+
Sbjct: 6   LLEAEEKMDKAVSVAKDDFAGIRTGRVTPSMFNKISAEYYGTPTPIQQLASFHVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +A++E+ I  S+LG+NP  +GQV+R+  PE +EERR   +KVA   AE+SK
Sbjct: 66  IIQPFDKGSMAAIEKAIRNSDLGVNPGNDGQVIRVAFPELSEERRREYIKVARNKAEQSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR+  + L K  K  +A ED V   E ++  +T   +  ID   + K+ E++  
Sbjct: 126 VSIRNIRRNAKETLDKMVKDSEAGEDEVRRAEKELDDLTQKHVAKIDELLKHKEAELLEV 185


>gi|217072182|gb|ACJ84451.1| unknown [Medicago truncatula]
 gi|217072782|gb|ACJ84751.1| unknown [Medicago truncatula]
          Length = 262

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            ++K RM  T+  +K +  ++RTGR +PSMLD ++VE YGS V L  +A ++  +   L+
Sbjct: 84  NDVKSRMERTLDNVKTNFSSIRTGRATPSMLDKIEVEYYGSPVSLKTIAQISTPDASSLL 143

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VS +DK  + ++E+ I  S++G+ P  +G+V+R+ +P+ T +RR  L K+     E+ K+
Sbjct: 144 VSPYDKSSLKAIEKAIVNSDVGMTPNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEGKV 203

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +   +K  K  K SED V  L +D+QK+TD  IK +D+ +++K+KE++  
Sbjct: 204 ALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLTDDYIKKVDALYKQKEKELLTV 262


>gi|183981840|ref|YP_001850131.1| ribosome recycling factor Frr [Mycobacterium marinum M]
 gi|238689247|sp|B2HJP0|RRF_MYCMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|183175166|gb|ACC40276.1| ribosome recycling factor Frr [Mycobacterium marinum M]
          Length = 185

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  ++DM T+RTGR +P M   + ++ YG+H P+ Q+A++ V E RM+
Sbjct: 6   LFDAEEKMEKAVSVAREDMATIRTGRANPGMFSRIVIDYYGTHTPITQLASINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A    E+++
Sbjct: 66  VIKPYEANQLHAIETAIRNSDLGVNPTNDGTIIRVAVPQLTEERRRDLVKQAKHKGEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + RK G+A ED VA  E D+ K T   +  ID   + K+ E++  
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVARAEKDLDKSTHQYVAQIDELVKHKEGELLEV 185


>gi|303258058|ref|ZP_07344066.1| ribosome recycling factor [Burkholderiales bacterium 1_1_47]
 gi|330998729|ref|ZP_08322458.1| ribosome recycling factor [Parasutterella excrementihominis YIT
           11859]
 gi|302859077|gb|EFL82160.1| ribosome recycling factor [Burkholderiales bacterium 1_1_47]
 gi|329576468|gb|EGG57980.1| ribosome recycling factor [Parasutterella excrementihominis YIT
           11859]
          Length = 186

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              +  M  +I  LK+++M +RTGR    +L+ + V+ YG   P++QVA + + + R + 
Sbjct: 8   SQSEHHMKRSIETLKENLMKIRTGRAHTGLLEHITVDYYGCPTPISQVAQLGLADARTIT 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+MVA VE+ I  S+LGLNP   G+V+R+P+P  TEERR  L KV  +  E++K+
Sbjct: 68  VQPWEKKMVAVVEKAIRNSDLGLNPATSGEVIRVPMPPLTEERRRDLTKVVRSEGEETKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + +    K  + SED       +IQK+TD  I  +D    EK+KEIM  
Sbjct: 128 AIRNLRRDANNKVAALVKEKEISEDDERRSNTEIQKLTDKYIGEVDKLIAEKEKEIMTV 186


>gi|302879001|ref|YP_003847565.1| ribosome recycling factor [Gallionella capsiferriformans ES-2]
 gi|302581790|gb|ADL55801.1| ribosome recycling factor [Gallionella capsiferriformans ES-2]
          Length = 185

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L+ D+  +RTGR    +LD V V+ YGS   + QVAN+T+++ R + 
Sbjct: 7   KDAEARMRKSLDALRADLGKVRTGRAHTGLLDHVMVDYYGSPTLVTQVANITLVDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K MV  VER I +++LGLNP   G+++R+P+P  TEERR  ++K+  +  E +KI
Sbjct: 67  VQPYEKSMVGKVERAIRDADLGLNPATNGELIRVPMPMLTEERRRDMIKLVKSEGEDAKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED    +++DIQK+TD  +  ID     K+ ++M  
Sbjct: 127 AVRNIRRDANGSLKDLLKKKEISEDDERRVQDDIQKLTDRFVSEIDQMLAAKEVDLMAV 185


>gi|190360293|sp|Q28PI7|RRF_JANSC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 184

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 85/185 (45%), Positives = 123/185 (66%), Gaps = 4/185 (2%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++D  +++ RM   I+ L+ +  +LRTGR S SML+ V V+AYG+  P+NQV  V V 
Sbjct: 4   DFMLDTDDLERRMEGAIASLRTEFASLRTGRASASMLEPVMVDAYGAMTPINQVGTVNVP 63

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPRM+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y
Sbjct: 64  EPRMVTVNVWDKGLVNKVEKAIRESGLGINPQMNGTIIMLPIPELNEERRRELTKVAGTY 123

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE ++++VRN+RRDGMD +KK+      SED     E  +Q++TD+ IK +D   E K++
Sbjct: 124 AENARVAVRNVRRDGMDQIKKA----DTSEDDAKFWEGAVQELTDTFIKRVDDQLETKQE 179

Query: 182 EIMHF 186
           EIM  
Sbjct: 180 EIMQV 184


>gi|296536126|ref|ZP_06898255.1| ribosome recycling factor [Roseomonas cervicalis ATCC 49957]
 gi|296263538|gb|EFH10034.1| ribosome recycling factor [Roseomonas cervicalis ATCC 49957]
          Length = 190

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 82/176 (46%), Positives = 118/176 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q++  RM   +  LKK+   LRTGR SP++L+ ++VE YG++ PL+QVANV+V  P +L 
Sbjct: 12  QDLTRRMDGALEVLKKEFSGLRTGRASPALLEPIRVEVYGANQPLSQVANVSVGGPGLLS 71

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWD+    +VE  I +S LGLNP  EGQ +R+P+P  T+ERR  L K AH YAE +K+
Sbjct: 72  VQVWDRSAAKAVEIAIRDSGLGLNPQTEGQTIRVPLPPLTQERRNELAKQAHKYAEAAKV 131

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +VR +RRDGM+ +K   K  +  +D  A   +++QK+TD TIK +D    EK+K+I
Sbjct: 132 AVRGVRRDGMESIKGWEKKSEIGKDDAAKWSDEVQKLTDQTIKKVDELLAEKEKDI 187


>gi|296268981|ref|YP_003651613.1| ribosome recycling factor [Thermobispora bispora DSM 43833]
 gi|296091768|gb|ADG87720.1| ribosome recycling factor [Thermobispora bispora DSM 43833]
          Length = 185

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +S  K+D  T+R GR++P++ + + V+ YGS  PL Q+A+  V E R++
Sbjct: 6   LLEAEEKMDKAVSVAKEDFATIRAGRITPAIFNKINVDYYGSPTPLQQLASFHVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  + ++E+ I +S+LG+NP  +G V+R+  PE +EERR   +K+A   AE ++
Sbjct: 66  IIQPFDKSALNAIEKAIRDSDLGVNPSNDGNVIRVVFPELSEERRKEYIKMARNKAESAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR   + L K  K G+  ED V     ++  +T   +  ID   + K+ E++  
Sbjct: 126 VSVRNIRRHAKEALDKLVKEGQVGEDEVHRAVKELDDLTHKHVAKIDDMLKHKEAELLEV 185


>gi|293605059|ref|ZP_06687452.1| ribosome recycling factor [Achromobacter piechaudii ATCC 43553]
 gi|292816561|gb|EFF75649.1| ribosome recycling factor [Achromobacter piechaudii ATCC 43553]
          Length = 186

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM  ++  LK ++  +RTGR    +LD V+VE YGS VP+ QVANV +++ R + 
Sbjct: 8   KSADARMAKSLDTLKINLGKIRTGRAHTGILDHVQVEYYGSPVPVGQVANVNLVDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K M   +E+ I ES+LGLNPI  G  +R+P+P  TEERR  L KV  +  E +KI
Sbjct: 68  VQPYEKHMAGPIEKAIRESDLGLNPISMGDTIRVPMPALTEERRRDLTKVVRSEGEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RR+  + LKK  K  + SED     ++D+QK+TD ++ +ID    +K+ EIM  
Sbjct: 128 AVRNLRREANEALKKLVKDKEISEDDERRAQDDVQKLTDRSVADIDKMVVQKEAEIMTV 186


>gi|48474234|sp|Q8L1H5|RRF_PARZE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|20429121|emb|CAD24430.1| ribosome recycling factor [Paracoccus zeaxanthinifaciens]
          Length = 187

 Score =  235 bits (600), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 85/182 (46%), Positives = 120/182 (65%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL +++ RM   +  L+ +  +LRTGR S SM++ V+VEAYG   P+NQV  V V EPR
Sbjct: 7   IDLDDLERRMKGAMDSLRAEFASLRTGRASASMVEPVQVEAYGQMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK MV  VE+ I ES LG+NP   G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTINVWDKGMVGKVEKAIRESGLGINPQTNGTIIMLPIPELNEERRRELTKVAAQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK + +G   ED     E  +Q++TD +I N+D   E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKGKANG-MPEDDQKFWETAVQELTDKSIGNVDQALEAKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|297566374|ref|YP_003685346.1| ribosome recycling factor [Meiothermus silvanus DSM 9946]
 gi|296850823|gb|ADH63838.1| ribosome recycling factor [Meiothermus silvanus DSM 9946]
          Length = 185

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 71/176 (40%), Positives = 108/176 (61%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             ++ M   +  L+  +  LRTGR +P++L  ++V+ YGS +P+ Q+  +T  + R LV+
Sbjct: 8   ETRNHMQKALDALEHHLSGLRTGRANPAILKSIRVDYYGSLMPIEQLGTITAPDARTLVI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WD   + S+E+ I +S+LGLNP  +G  L I +P  TEERR  LVK    YAE+++++
Sbjct: 68  QSWDAGALKSIEKAIRDSDLGLNPNNKGDSLFISIPPLTEERRRELVKAVKHYAEEARVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VRN RR+ +D  KK  K    SED +   E +IQKITD  I  +DS  E+K+ EI+
Sbjct: 128 VRNARREAVDKAKKLGKEQHLSEDDIKRAEAEIQKITDEFIGKVDSALEKKEHEIL 183


>gi|289450226|ref|YP_003475249.1| ribosome recycling factor [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289184773|gb|ADC91198.1| ribosome recycling factor [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 187

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 70/176 (39%), Positives = 114/176 (64%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +DRM  +I  LK+++ ++R GR +P +LD + +  YG+  PLNQVAN+ V EPRM+ +S 
Sbjct: 12  EDRMNKSIDNLKENLNSVRAGRANPHILDRITISYYGAETPLNQVANIQVPEPRMITISP 71

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD   ++ +E+ +  S++G+NP  +G+++R+  P  TEERR  L K    Y E++KI VR
Sbjct: 72  WDPSSLSLIEKAVLMSDIGINPNNDGKMIRLVFPTLTEERRKDLAKTVAKYGEETKIVVR 131

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RR+ +D  K   KS + S+D + ++E+D+QKIT+     ID     K+K++M  
Sbjct: 132 NVRREAIDKFKALHKSKELSDDDIRTVEDDVQKITNRFTAKIDEIVAAKEKDLMEI 187


>gi|78485626|ref|YP_391551.1| ribosome recycling factor [Thiomicrospira crunogena XCL-2]
 gi|123555416|sp|Q31G46|RRF_THICR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78363912|gb|ABB41877.1| ribosome recycling factor [Thiomicrospira crunogena XCL-2]
          Length = 185

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 74/186 (39%), Positives = 117/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           ++++ D  +  DRM  ++  L+ +   +RTGR  PS+LD VKV+ YGS VP++QVANV V
Sbjct: 2   IDEIFD--DANDRMTKSVENLESNFAKIRTGRAHPSILDAVKVDYYGSEVPVSQVANVNV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V  W++ MV+ VE+ I  S++G+NP+  G V+RIP+P  TEERR   +K+A +
Sbjct: 60  EDARTLTVQPWEQSMVSVVEKAIMTSDIGVNPVTTGNVMRIPMPPLTEERRKEFIKLAKS 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++K+++RNIRRD     K   K  + ++D +   E  IQK TD  +  +D    +K+
Sbjct: 120 EAEQTKVAIRNIRRDANADFKNLNKDKEITDDELRQAEEQIQKATDEHVSQVDQMLAKKE 179

Query: 181 KEIMHF 186
           + +M  
Sbjct: 180 ESLMEI 185


>gi|257458508|ref|ZP_05623645.1| ribosome recycling factor [Treponema vincentii ATCC 35580]
 gi|257444105|gb|EEV19211.1| ribosome recycling factor [Treponema vincentii ATCC 35580]
          Length = 184

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 76/175 (43%), Positives = 117/175 (66%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M  +I+ LK +   LRTGR S S+ D ++V++YG   PLNQVA +++ E R++V+  
Sbjct: 9   EEKMKKSIAALKDEFNALRTGRASTSLFDKIRVDSYGQPTPLNQVATISIPEARLVVIQP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK ++  +E+ I +S L LNP  +G+++RI +P  TEERR  L K A  +AE+ ++++R
Sbjct: 69  WDKSLLGEIEKAILKSELSLNPANDGKLIRIAIPPLTEERRKELAKQAKNFAEQCRVAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRRDG+D  KK +K G  SED + + E   QK TD+ I +I+    EK+KEIM 
Sbjct: 129 NIRRDGIDEAKKQQKDGLLSEDALKTAEEKFQKATDAHINDINKLLAEKEKEIME 183


>gi|58581596|ref|YP_200612.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623520|ref|YP_450892.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|166712735|ref|ZP_02243942.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzicola BLS256]
 gi|188577166|ref|YP_001914095.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|62900777|sp|Q5H1E4|RRF_XANOR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123522271|sp|Q2P4A9|RRF_XANOM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689544|sp|B2SR02|RRF_XANOP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|58426190|gb|AAW75227.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367460|dbj|BAE68618.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521618|gb|ACD59563.1| ribosome recycling factor [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 185

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQTRMTKSIDALRHSLTTVRTGRASPALLDGIKVKAYGTDTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H   E SK+
Sbjct: 67  ISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDSKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K    +ED     E+DIQK+TD  IK++D   + K++E+M  
Sbjct: 127 AIRNIRRDANQQVKDLLKDKAVTEDEARGAEDDIQKLTDKAIKDVDEVVKAKEQELMTV 185


>gi|242242542|ref|ZP_04796987.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           W23144]
 gi|242233969|gb|EES36281.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           W23144]
 gi|319401451|gb|EFV89661.1| ribosome recycling factor [Staphylococcus epidermidis FRI909]
          Length = 184

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 122/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDII--KDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD++IK+ID    +K+
Sbjct: 119 IGEDAKVSIRNIRRDINDQLKKDEKNGDITEDDLRSQTDDVQKATDNSIKDIDQLVADKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|260437176|ref|ZP_05790992.1| ribosome recycling factor [Butyrivibrio crossotus DSM 2876]
 gi|292810489|gb|EFF69694.1| ribosome recycling factor [Butyrivibrio crossotus DSM 2876]
          Length = 184

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+++I  +  +++M  +   L  D +T+R GR +P +LD +KV+ YG+  P  QVANV+V
Sbjct: 1   MSEII--KTYEEKMIKSCDTLAADYVTIRAGRANPHILDKLKVDYYGTPTPFQQVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+  ++  +E+ I  S+LGL P  +G+V+R+  PE TE+RR  LVK    
Sbjct: 59  PEARMIQIQPWETSLLKEIEKAILMSDLGLTPTNDGKVIRLVFPELTEDRRKELVKDIKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+++RNIRRD  D +KK  K    SED V   E+ IQK+TD  +  +D   +EK 
Sbjct: 119 KGENTKVAIRNIRRDANDAIKKLSKDTDMSEDEVKKNEDSIQKLTDKYVAQVDKMIDEKS 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMTV 184


>gi|323489579|ref|ZP_08094806.1| ribosome recycling factor [Planococcus donghaensis MPA1U2]
 gi|323396710|gb|EGA89529.1| ribosome recycling factor [Planococcus donghaensis MPA1U2]
          Length = 185

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   + +M + I    +D+ ++R GR +PS+LD + ++ YGS  P+NQVA +++ E R++
Sbjct: 6   MNETQSKMNNAIQAFSRDLASIRAGRATPSILDKLTIDYYGSPTPVNQVAGISIPEARLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK ++  +E+ I +S+LGL+P  +G V+R+ VP  TEERR  LVK     AE++K
Sbjct: 66  MIQPYDKSVLGDIEKAILKSDLGLSPSNDGSVIRLAVPALTEERRKDLVKQVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +RNIRRD  D  KK  K  + + D +    +D+QK+TD  I  ID   ++K+K IM  
Sbjct: 126 IGIRNIRRDANDEFKKLEKKSEITVDDLRGYSDDVQKLTDDNIAKIDEMAKDKEKGIMEV 185


>gi|307546391|ref|YP_003898870.1| ribosome recycling factor [Halomonas elongata DSM 2581]
 gi|307218415|emb|CBV43685.1| K02838 ribosome recycling factor [Halomonas elongata DSM 2581]
          Length = 185

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L  +   +RTGR  PS+LD V VE YGS +P+NQVA+V V + R L 
Sbjct: 7   KDAESRMKKSLEALHNNFNKIRTGRAHPSILDAVTVEYYGSQMPINQVASVNVEDARTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W++ MV  VE+ I  + LGLNP   G V+R+P+P  TEE R   +K A   AE +++
Sbjct: 67  VVPWEQSMVPKVEKAIMTAELGLNPASAGNVIRVPMPMLTEETRKGYIKQARQEAENTRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD    +K   K    +ED     E++IQK+TD  +  ID   E K+ ++M  
Sbjct: 127 AVRNVRRDANHEIKTLLKDKDITEDDQRQGEDEIQKLTDKIVGEIDKALESKEHDLMQV 185


>gi|221066088|ref|ZP_03542193.1| ribosome recycling factor [Comamonas testosteroni KF-1]
 gi|220711111|gb|EED66479.1| ribosome recycling factor [Comamonas testosteroni KF-1]
          Length = 186

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +MG +I  LK ++  +RTGR +P++LD + VE YGS VPL+QVANV++L+ R + 
Sbjct: 8   KNTETKMGQSIEALKNNLARVRTGRANPALLDAIHVEYYGSMVPLSQVANVSLLDSRTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A VE+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E  KI
Sbjct: 68  VQPWEKNMAAKVEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGENGKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + +KK  K  +ASED     E +IQKITD  I  +D+    K+++IM  
Sbjct: 128 AIRNLRRDANESVKKLVKDKEASEDDQKRSEAEIQKITDKHIAEVDTLVAAKEQDIMAV 186


>gi|41409043|ref|NP_961879.1| ribosome recycling factor [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118463206|ref|YP_882906.1| ribosome recycling factor [Mycobacterium avium 104]
 gi|254776160|ref|ZP_05217676.1| ribosome recycling factor [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|47116995|sp|P61307|RRF_MYCPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230799|sp|A0QJ18|RRF_MYCA1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|41397402|gb|AAS05262.1| Frr [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118164493|gb|ABK65390.1| ribosome recycling factor [Mycobacterium avium 104]
          Length = 185

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D+ T+RTGR +P M   + ++ YG+  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRIVIDYYGAATPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   V ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A +  E +K
Sbjct: 66  VIKPYEASQVGAIETAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + RK G+A ED V   E D+ K T   I  ID   + K+ E++  
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDKTTHQYITQIDELVKHKEGELLEV 185


>gi|332653365|ref|ZP_08419110.1| ribosome recycling factor [Ruminococcaceae bacterium D16]
 gi|332518511|gb|EGJ48114.1| ribosome recycling factor [Ruminococcaceae bacterium D16]
          Length = 184

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +    +M  TI  +K +  ++R GR +  +LD + VE YG+  PLNQVA ++  +PR L 
Sbjct: 6   KAYDQKMIKTIEVVKANFASVRAGRANAGVLDRIMVEYYGTPTPLNQVAAISSPDPRTLT 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WD  ++ ++E+ I  S+LG+NP  +G+++R+  P+ TEERR  L K    Y+E+ K+
Sbjct: 66  VQPWDASLLKAIEKAIQTSDLGINPQNDGRLIRLAFPQLTEERRKELTKQVRKYSEEGKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD MD  KK +K+ + +ED +  LE ++Q +TD   K+ID    +K++E+M  
Sbjct: 126 ALRNIRRDAMDEFKKKKKASEITEDDLKELEKELQDLTDKRCKDIDELTVKKEQELMAV 184


>gi|219362787|ref|NP_001137010.1| hypothetical protein LOC100217177 [Zea mays]
 gi|194697972|gb|ACF83070.1| unknown [Zea mays]
 gi|223972995|gb|ACN30685.1| unknown [Zea mays]
          Length = 266

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              K++M   I  ++ +  T+RTGR SP+MLD ++VE YG+ V L  +A ++  +   L+
Sbjct: 88  DQAKEKMEKAIETVQTNFNTVRTGRASPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLL 147

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK  +  +E+ I  +NLG+ P  +G+V+R+ VP  T +RR  L K     AE  K+
Sbjct: 148 IQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLAEDGKV 207

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +    K +K  K SED V  L  D+QK+TD  +KNIDS  ++K++E+M  
Sbjct: 208 AIRNIRRDAIKAYDKLQKEKKLSEDNVKDLSADLQKVTDEYMKNIDSIQKQKEQELMKI 266


>gi|319793980|ref|YP_004155620.1| ribosome recycling factor [Variovorax paradoxus EPS]
 gi|315596443|gb|ADU37509.1| ribosome recycling factor [Variovorax paradoxus EPS]
          Length = 186

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 75/184 (40%), Positives = 115/184 (62%), Gaps = 1/184 (0%)

Query: 4   VIDLQNIKD-RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + D+++  D +M  +++  + ++  +RTGR + ++LD + VE YGS VPL+QVANV+VL+
Sbjct: 3   IADIRSATDAKMNQSLAAFQNNLTKIRTGRANSALLDSIHVEYYGSQVPLSQVANVSVLD 62

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R + V  W+K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+     
Sbjct: 63  SRTISVQPWEKGMGAKIEKAIRESDLGLNPASMGDLIRVPLPAMSEERRKEMTKLVRNEG 122

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E +K++ RN+RRD  + +KK  K   ASED     E +IQK+TD  I  ID     K+ E
Sbjct: 123 ETAKVATRNLRRDANESVKKLVKDKLASEDDQKRAEAEIQKVTDRHIAEIDRLVAAKEAE 182

Query: 183 IMHF 186
           IM  
Sbjct: 183 IMAV 186


>gi|33863513|ref|NP_895073.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9313]
 gi|39932089|sp|Q7V6C1|RRF_PROMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33640962|emb|CAE21420.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9313]
          Length = 182

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q +KD M  ++   +++  T+RTGR +PS+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   QELKDNMHKSVEATQRNFATIRTGRANPSLLDRINVEYYGTETPLKSLATISTPDSQTIA 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +  +E+ I  S+LGL P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDNGSMGLIEKAIATSDLGLTPNNDGKIIRINVPPLTEERRKEFCKLAARYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D +KK  K  + S+D     ++ IQK+TD+ I  I+ +  EK+ +I+  
Sbjct: 124 ALRNIRRDAIDKVKKLEKDAELSKDQSHDEQDGIQKLTDTFITEIEKYLAEKEADILKV 182


>gi|16800419|ref|NP_470687.1| ribosome recycling factor [Listeria innocua Clip11262]
 gi|22001944|sp|Q92C40|RRF_LISIN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|16413824|emb|CAC96582.1| frr [Listeria innocua Clip11262]
          Length = 185

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEDLKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 185


>gi|320159761|ref|YP_004172985.1| ribosome recycling factor [Anaerolinea thermophila UNI-1]
 gi|319993614|dbj|BAJ62385.1| ribosome recycling factor [Anaerolinea thermophila UNI-1]
          Length = 185

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM   I  L++++  +RTGR SP++++ ++VE YG   PL Q+A+++  EPR+L
Sbjct: 6   LKEAETRMKGAIQALEENLAGIRTGRASPALVERLQVEYYGVPTPLMQLASISAPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +  +E+ I  S+LGL P  +G+V+R+ +P  TEERR  LVKV HA  E+S+
Sbjct: 66  MIRPFDTSSLRLIEKAIMASDLGLTPNNDGKVIRLNIPPLTEERRRELVKVVHARLEESR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RRD +  L+   K    SED +   E ++QK+TD  I+ ID+  ++K+KEIM  
Sbjct: 126 IAVRNVRRDMVKDLRDFEKEKLISEDDLKKGEEELQKLTDRYIQEIDAIGQKKEKEIMEV 185


>gi|332799211|ref|YP_004460710.1| Ribosome-recycling factor [Tepidanaerobacter sp. Re1]
 gi|332696946|gb|AEE91403.1| Ribosome-recycling factor [Tepidanaerobacter sp. Re1]
          Length = 185

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 74/178 (41%), Positives = 120/178 (67%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
            ++++M + +  LK +  T+R GR S ++LD + V+ YGS  P+NQVA+V+V EP+M+++
Sbjct: 8   EMENQMNEVLVNLKSEFTTIRAGRASAALLDKIYVDYYGSPTPVNQVASVSVPEPKMILI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WD +M+  +E+ I +S+LGL P  +G+V+R+ +PE T ERR  LVK++   AE++K+S
Sbjct: 68  QPWDLKMLGVIEKAILKSDLGLTPNNDGKVIRLILPELTAERRQELVKLSKKKAEEAKVS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRR+  D LKK  K+ + SED +   + +IQKITD  I  ++     K+K+IM  
Sbjct: 128 IRNIRREYNDVLKKMEKNREISEDDLKRSQEEIQKITDKYIDEVEKILANKEKDIMEV 185


>gi|29376892|ref|NP_816046.1| ribosome recycling factor [Enterococcus faecalis V583]
 gi|227519884|ref|ZP_03949933.1| ribosome recycling factor [Enterococcus faecalis TX0104]
 gi|227553929|ref|ZP_03983976.1| ribosome recycling factor [Enterococcus faecalis HH22]
 gi|229549430|ref|ZP_04438155.1| ribosome recycling factor [Enterococcus faecalis ATCC 29200]
 gi|255972134|ref|ZP_05422720.1| ribosome recycling factor [Enterococcus faecalis T1]
 gi|255975201|ref|ZP_05425787.1| ribosome recycling factor [Enterococcus faecalis T2]
 gi|256617047|ref|ZP_05473893.1| ribosome recycling factor [Enterococcus faecalis ATCC 4200]
 gi|256763091|ref|ZP_05503671.1| ribosome recycling factor [Enterococcus faecalis T3]
 gi|256853758|ref|ZP_05559123.1| ribosome recycling factor [Enterococcus faecalis T8]
 gi|256956675|ref|ZP_05560846.1| ribosome recycling factor [Enterococcus faecalis DS5]
 gi|256961308|ref|ZP_05565479.1| ribosome recycling factor [Enterococcus faecalis Merz96]
 gi|256963564|ref|ZP_05567735.1| ribosome recycling factor [Enterococcus faecalis HIP11704]
 gi|257079630|ref|ZP_05573991.1| ribosome recycling factor [Enterococcus faecalis JH1]
 gi|257087429|ref|ZP_05581790.1| ribosome recycling factor [Enterococcus faecalis D6]
 gi|257090589|ref|ZP_05584950.1| ribosome recycling factor [Enterococcus faecalis CH188]
 gi|257416636|ref|ZP_05593630.1| ribosome recycling factor [Enterococcus faecalis AR01/DG]
 gi|257419852|ref|ZP_05596846.1| ribosome recycling factor [Enterococcus faecalis T11]
 gi|257421959|ref|ZP_05598949.1| ribosome recycling factor [Enterococcus faecalis X98]
 gi|293383593|ref|ZP_06629503.1| ribosome recycling factor [Enterococcus faecalis R712]
 gi|293387294|ref|ZP_06631851.1| ribosome recycling factor [Enterococcus faecalis S613]
 gi|294780910|ref|ZP_06746264.1| ribosome recycling factor [Enterococcus faecalis PC1.1]
 gi|300861008|ref|ZP_07107095.1| ribosome recycling factor [Enterococcus faecalis TUSoD Ef11]
 gi|307270847|ref|ZP_07552134.1| ribosome recycling factor [Enterococcus faecalis TX4248]
 gi|307271503|ref|ZP_07552775.1| ribosome recycling factor [Enterococcus faecalis TX0855]
 gi|307277169|ref|ZP_07558273.1| ribosome recycling factor [Enterococcus faecalis TX2134]
 gi|307285820|ref|ZP_07565954.1| ribosome recycling factor [Enterococcus faecalis TX0860]
 gi|307290551|ref|ZP_07570463.1| ribosome recycling factor [Enterococcus faecalis TX0411]
 gi|312899827|ref|ZP_07759146.1| ribosome recycling factor [Enterococcus faecalis TX0470]
 gi|312905119|ref|ZP_07764240.1| ribosome recycling factor [Enterococcus faecalis TX0635]
 gi|312906143|ref|ZP_07765155.1| ribosome recycling factor [Enterococcus faecalis DAPTO 512]
 gi|312909488|ref|ZP_07768343.1| ribosome recycling factor [Enterococcus faecalis DAPTO 516]
 gi|312953477|ref|ZP_07772317.1| ribosome recycling factor [Enterococcus faecalis TX0102]
 gi|34924912|sp|Q831V2|RRF_ENTFA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29344357|gb|AAO82116.1| ribosome recycling factor [Enterococcus faecalis V583]
 gi|227072678|gb|EEI10641.1| ribosome recycling factor [Enterococcus faecalis TX0104]
 gi|227176915|gb|EEI57887.1| ribosome recycling factor [Enterococcus faecalis HH22]
 gi|229305667|gb|EEN71663.1| ribosome recycling factor [Enterococcus faecalis ATCC 29200]
 gi|255963152|gb|EET95628.1| ribosome recycling factor [Enterococcus faecalis T1]
 gi|255968073|gb|EET98695.1| ribosome recycling factor [Enterococcus faecalis T2]
 gi|256596574|gb|EEU15750.1| ribosome recycling factor [Enterococcus faecalis ATCC 4200]
 gi|256684342|gb|EEU24037.1| ribosome recycling factor [Enterococcus faecalis T3]
 gi|256710701|gb|EEU25744.1| ribosome recycling factor [Enterococcus faecalis T8]
 gi|256947171|gb|EEU63803.1| ribosome recycling factor [Enterococcus faecalis DS5]
 gi|256951804|gb|EEU68436.1| ribosome recycling factor [Enterococcus faecalis Merz96]
 gi|256954060|gb|EEU70692.1| ribosome recycling factor [Enterococcus faecalis HIP11704]
 gi|256987660|gb|EEU74962.1| ribosome recycling factor [Enterococcus faecalis JH1]
 gi|256995459|gb|EEU82761.1| ribosome recycling factor [Enterococcus faecalis D6]
 gi|256999401|gb|EEU85921.1| ribosome recycling factor [Enterococcus faecalis CH188]
 gi|257158464|gb|EEU88424.1| ribosome recycling factor [Enterococcus faecalis ARO1/DG]
 gi|257161680|gb|EEU91640.1| ribosome recycling factor [Enterococcus faecalis T11]
 gi|257163783|gb|EEU93743.1| ribosome recycling factor [Enterococcus faecalis X98]
 gi|291079105|gb|EFE16469.1| ribosome recycling factor [Enterococcus faecalis R712]
 gi|291083331|gb|EFE20294.1| ribosome recycling factor [Enterococcus faecalis S613]
 gi|294452036|gb|EFG20484.1| ribosome recycling factor [Enterococcus faecalis PC1.1]
 gi|295113452|emb|CBL32089.1| ribosome recycling factor [Enterococcus sp. 7L76]
 gi|300850047|gb|EFK77797.1| ribosome recycling factor [Enterococcus faecalis TUSoD Ef11]
 gi|306498406|gb|EFM67911.1| ribosome recycling factor [Enterococcus faecalis TX0411]
 gi|306502581|gb|EFM71848.1| ribosome recycling factor [Enterococcus faecalis TX0860]
 gi|306506099|gb|EFM75265.1| ribosome recycling factor [Enterococcus faecalis TX2134]
 gi|306511775|gb|EFM80773.1| ribosome recycling factor [Enterococcus faecalis TX0855]
 gi|306512760|gb|EFM81405.1| ribosome recycling factor [Enterococcus faecalis TX4248]
 gi|310627789|gb|EFQ11072.1| ribosome recycling factor [Enterococcus faecalis DAPTO 512]
 gi|310628686|gb|EFQ11969.1| ribosome recycling factor [Enterococcus faecalis TX0102]
 gi|310631509|gb|EFQ14792.1| ribosome recycling factor [Enterococcus faecalis TX0635]
 gi|311290161|gb|EFQ68717.1| ribosome recycling factor [Enterococcus faecalis DAPTO 516]
 gi|311293077|gb|EFQ71633.1| ribosome recycling factor [Enterococcus faecalis TX0470]
 gi|315025416|gb|EFT37348.1| ribosome recycling factor [Enterococcus faecalis TX2137]
 gi|315030225|gb|EFT42157.1| ribosome recycling factor [Enterococcus faecalis TX4000]
 gi|315032889|gb|EFT44821.1| ribosome recycling factor [Enterococcus faecalis TX0017]
 gi|315035626|gb|EFT47558.1| ribosome recycling factor [Enterococcus faecalis TX0027]
 gi|315146673|gb|EFT90689.1| ribosome recycling factor [Enterococcus faecalis TX4244]
 gi|315150163|gb|EFT94179.1| ribosome recycling factor [Enterococcus faecalis TX0012]
 gi|315152144|gb|EFT96160.1| ribosome recycling factor [Enterococcus faecalis TX0031]
 gi|315155331|gb|EFT99347.1| ribosome recycling factor [Enterococcus faecalis TX0043]
 gi|315159093|gb|EFU03110.1| ribosome recycling factor [Enterococcus faecalis TX0312]
 gi|315161686|gb|EFU05703.1| ribosome recycling factor [Enterococcus faecalis TX0645]
 gi|315166409|gb|EFU10426.1| ribosome recycling factor [Enterococcus faecalis TX1341]
 gi|315170306|gb|EFU14323.1| ribosome recycling factor [Enterococcus faecalis TX1342]
 gi|315173660|gb|EFU17677.1| ribosome recycling factor [Enterococcus faecalis TX1346]
 gi|315574370|gb|EFU86561.1| ribosome recycling factor [Enterococcus faecalis TX0309B]
 gi|315579052|gb|EFU91243.1| ribosome recycling factor [Enterococcus faecalis TX0630]
 gi|315580155|gb|EFU92346.1| ribosome recycling factor [Enterococcus faecalis TX0309A]
 gi|323481387|gb|ADX80826.1| ribosome recycling factor [Enterococcus faecalis 62]
 gi|327535683|gb|AEA94517.1| ribosome recycling factor [Enterococcus faecalis OG1RF]
 gi|329572247|gb|EGG53907.1| ribosome recycling factor [Enterococcus faecalis TX1467]
          Length = 185

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L++++  +R GR + S+LD ++VE YG+  P+NQ+A++ + E R+L
Sbjct: 6   LATAKEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A +E+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE SK
Sbjct: 66  MITPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD MD LKK++K+G  +ED + S E D+QK+TD +IKNID+   EK++E++  
Sbjct: 126 VAVRNVRRDAMDELKKAQKNGDITEDELRSFEKDVQKLTDDSIKNIDAITAEKEQELLEV 185


>gi|261856047|ref|YP_003263330.1| ribosome recycling factor [Halothiobacillus neapolitanus c2]
 gi|261836516|gb|ACX96283.1| ribosome recycling factor [Halothiobacillus neapolitanus c2]
          Length = 185

 Score =  234 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM  +I  LK ++  +RTGR   S+LD V V+ YGS VPL+QVA ++  + R L 
Sbjct: 7   KDCDVRMHKSIDALKVELSKIRTGRAHVSILDHVSVDYYGSMVPLSQVAKLSAEDSRTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+KEMV  +E+ I  S+LGLNP   G V+R+P+P  TEERR  L KV     E +K+
Sbjct: 67  VTPWEKEMVGKIEKAIMTSDLGLNPSTSGLVIRVPMPALTEERRKELGKVVRTEGENAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK   K    SED     ++ IQK+TD  +  ID    EK+KE++  
Sbjct: 127 AVRNIRRDANNDLKNMLKDKDISEDDERRGQDLIQKLTDQCVTEIDKLVAEKEKELLEV 185


>gi|313623929|gb|EFR94035.1| ribosome recycling factor [Listeria innocua FSL J1-023]
          Length = 185

 Score =  234 bits (599), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 185


>gi|126462131|ref|YP_001043245.1| ribosome recycling factor [Rhodobacter sphaeroides ATCC 17029]
 gi|221639121|ref|YP_002525383.1| ribosome recycling factor [Rhodobacter sphaeroides KD131]
 gi|332558135|ref|ZP_08412457.1| ribosome recycling factor [Rhodobacter sphaeroides WS8N]
 gi|190360247|sp|A3PJF7|RRF_RHOS1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809527|sp|B9KRU0|RRF_RHOSK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|126103795|gb|ABN76473.1| ribosome recycling factor [Rhodobacter sphaeroides ATCC 17029]
 gi|221159902|gb|ACM00882.1| Ribosome recycling factor [Rhodobacter sphaeroides KD131]
 gi|332275847|gb|EGJ21162.1| ribosome recycling factor [Rhodobacter sphaeroides WS8N]
          Length = 188

 Score =  234 bits (599), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 84/182 (46%), Positives = 127/182 (69%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL  I+ RM   +  L+ +  +LRTGR S S+L+ + V+AYG   PLNQ+  + V EPR
Sbjct: 8   IDLDAIQRRMDGAMHALRTEFGSLRTGRASASILEPIHVDAYGQQTPLNQLGTINVPEPR 67

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+V++VWDK M++ VER I +S +G+NP+V+G ++R+P+PE  EERR  L KVA  YAE+
Sbjct: 68  MVVINVWDKGMISKVERAIRDSGIGINPVVDGPIIRLPIPELNEERRKELSKVAAHYAEQ 127

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++ +G  +ED      +++Q +TD  I  +D   EEK+KEIM
Sbjct: 128 ARVAIRNVRRDGMDQIKKAKSAG-MAEDDQKMWSDEVQALTDKAIAAVDKALEEKQKEIM 186

Query: 185 HF 186
             
Sbjct: 187 QV 188


>gi|56478854|ref|YP_160443.1| ribosome recycling factor [Aromatoleum aromaticum EbN1]
 gi|60390230|sp|Q5NZH2|RRF_AZOSE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56314897|emb|CAI09542.1| ribosome recycling factor [Aromatoleum aromaticum EbN1]
          Length = 185

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  +I  LK D+  +RTGR    +LD V VE YGS VP++QV+NVT+++ R + 
Sbjct: 7   KTTEQKMQKSIDVLKADLAKVRTGRAHTGLLDHVMVEYYGSMVPISQVSNVTLIDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VW+K M+  VER I +S+LGLNP  +G ++R+P+P  TEERR  L KV     E +K+
Sbjct: 67  VQVWEKPMMQKVERAIRDSDLGLNPANQGDIIRVPMPALTEERRRDLTKVVRHEGEAAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD   HLK + K    SED     + DIQK+TD  I  ID    +K++E+M  
Sbjct: 127 AIRNLRRDANQHLKDAVKDKTISEDDDRRAQEDIQKLTDRNIAEIDKLLAQKEQELMQL 185


>gi|289662904|ref|ZP_06484485.1| ribosome recycling factor [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289670225|ref|ZP_06491300.1| ribosome recycling factor [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 185

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQTRMTKSIDALRHSLTTVRTGRASPALLDGIKVKAYGTDTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H   E SK+
Sbjct: 67  ISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDSKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K    +ED     E+DIQK+TD  IK++D   + K++E+M  
Sbjct: 127 AIRNIRRDANQQVKDLLKDKAVTEDEARGAEDDIQKLTDKAIKDVDEVVKAKEQELMTV 185


>gi|259046749|ref|ZP_05737150.1| ribosome recycling factor [Granulicatella adiacens ATCC 49175]
 gi|259036645|gb|EEW37900.1| ribosome recycling factor [Granulicatella adiacens ATCC 49175]
          Length = 186

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 125/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L + K+RM  +   L++++ ++R GR + S+LD ++VE YG+  P+NQ+A++TV
Sbjct: 1   MSTSEILAHTKERMKKSEDALQRELGSIRAGRANASLLDRLEVEYYGALTPVNQLASITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML+++ +DK  +  +ER I  S++G+ P  +G V+R+ +P+ TEERR  L K    
Sbjct: 61  PEARMLLITPYDKSSLNDIERAILMSDIGITPTSDGSVIRLIIPQLTEERRKELAKQVGK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE +K+SVRNIRRD +D  KK+ K+ + +ED + +LE DIQK+TD ++KNID     K+
Sbjct: 121 EAENAKVSVRNIRRDAIDQAKKAEKAKEITEDELHTLEKDIQKVTDDSVKNIDKLAATKE 180

Query: 181 KEIMHF 186
           KE++  
Sbjct: 181 KELLEV 186


>gi|88807685|ref|ZP_01123197.1| ribosome releasing factor [Synechococcus sp. WH 7805]
 gi|88788899|gb|EAR20054.1| ribosome releasing factor [Synechococcus sp. WH 7805]
          Length = 182

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 62/179 (34%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            +++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   SDLESSMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S LG  P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISALASIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +D +KK  K G  SED     +++IQK+T+  I  ++     K+ +I+  
Sbjct: 124 ALRNLRRDAIDKIKKQEKDGDLSEDQSRDQQDEIQKLTNQFIAELEKHLATKEADILKV 182


>gi|319441376|ref|ZP_07990532.1| ribosome recycling factor [Corynebacterium variabile DSM 44702]
          Length = 185

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +D M  ++  +++D+ T+RTGR +P+M + V  E YG   P+ Q+A ++V EPRML
Sbjct: 6   LLDAEDHMSRSVDHVREDLTTIRTGRANPAMFNRVFAEYYGMRTPITQMATISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++  ++  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  LVKVA    E +K
Sbjct: 66  IIKPYEMSVMQEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDLVKVARGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RNIRR GMD LKK +K G A ED V + E ++ KIT   +  +D     K+KE+M  
Sbjct: 126 ISIRNIRRKGMDSLKKIQKDGDAGEDEVQAAEKELDKITQGYVAQVDEVVSSKEKELMEV 185


>gi|294666399|ref|ZP_06731645.1| ribosome releasing factor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292603841|gb|EFF47246.1| ribosome releasing factor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 185

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 83/179 (46%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQTRMTKSIDALRHSLTTIRTGRASPALLDGIKVKAYGADTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H   E SK+
Sbjct: 67  ISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDSKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K    +ED   S E+DIQK+TD  IKN+D   + K++E+M  
Sbjct: 127 AIRNIRRDANQQVKDLLKDKAVTEDEARSAEDDIQKLTDKAIKNVDEVVKGKEQELMTV 185


>gi|258653276|ref|YP_003202432.1| ribosome recycling factor [Nakamurella multipartita DSM 44233]
 gi|258556501|gb|ACV79443.1| ribosome recycling factor [Nakamurella multipartita DSM 44233]
          Length = 185

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 66/181 (36%), Positives = 109/181 (60%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L + +++M   +S  K D+ TLRTGR +P+M   ++V+ YG+  P+ Q+A + + E RM
Sbjct: 5   ELFDAEEKMEKAVSVAKDDLATLRTGRANPNMFGRIQVDYYGAPTPITQMAAINIPEARM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
            V+  +D   + +VE+ I +S+LG+NP  +G V+R+  P+ TE+RR  L K A +  E +
Sbjct: 65  AVIKPYDSSQLHAVEKAIRDSDLGVNPTTDGIVIRVVFPQLTEQRRRELGKTARSKGEDA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+S+RNIRR     L K  K G+  ED V   E ++Q+ITD     +D   + K+ E++ 
Sbjct: 125 KVSIRNIRRKCTQVLDKLVKDGEVGEDDVTRAEKELQQITDRYTSQVDEMVKHKEAELLE 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|21242171|ref|NP_641753.1| ribosome recycling factor [Xanthomonas axonopodis pv. citri str.
           306]
 gi|78047031|ref|YP_363206.1| ribosome recycling factor [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325929597|ref|ZP_08190711.1| ribosome recycling factor [Xanthomonas perforans 91-118]
 gi|24418656|sp|Q8PMK8|RRF_XANAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123585494|sp|Q3BVK7|RRF_XANC5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21107587|gb|AAM36289.1| ribosome recycling factor [Xanthomonas axonopodis pv. citri str.
           306]
 gi|78035461|emb|CAJ23106.1| ribosome recycling factor [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325540107|gb|EGD11735.1| ribosome recycling factor [Xanthomonas perforans 91-118]
          Length = 185

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQTRMTKSIDALRHSLTTIRTGRASPALLDGIKVKAYGADTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H   E SK+
Sbjct: 67  ISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDSKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K    +ED   S E+DIQK+TD  IK++D   + K++E+M  
Sbjct: 127 AIRNIRRDANQQVKDLLKDKAVTEDEARSAEDDIQKLTDKAIKDVDEVVKGKEQELMTV 185


>gi|323142320|ref|ZP_08077152.1| ribosome recycling factor [Phascolarctobacterium sp. YIT 12067]
 gi|322413204|gb|EFY04091.1| ribosome recycling factor [Phascolarctobacterium sp. YIT 12067]
          Length = 187

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 78/185 (42%), Positives = 123/185 (66%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N++I    I+ +M  +++ L+ D+ +LR GR +PS+L+ V V+ YGS  P+ QVA+VTV 
Sbjct: 5   NEII--SGIESKMEKSVAALRVDLASLRAGRATPSLLEKVMVDYYGSPTPVTQVASVTVP 62

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPRM+V+  W+K ++  +E+ I +S+LGLNP  +G  +R+ +P+ TEERR  LVKV H  
Sbjct: 63  EPRMIVIQPWEKNILKDIEKAIMKSDLGLNPNSDGICIRLNLPQLTEERRKDLVKVVHKK 122

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE+ ++ VRN+RRD  D +KK+ K+ + +ED        +QK+TD  +K ID+    K+K
Sbjct: 123 AEEYRVVVRNLRRDANDAIKKTEKAKEITEDEAKKGTEKVQKLTDKVMKEIDAAAANKEK 182

Query: 182 EIMHF 186
           E+M  
Sbjct: 183 EVMEV 187


>gi|219127660|ref|XP_002184049.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404280|gb|EEC44227.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 225

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            +  DRM  ++  ++ ++ ++RTGR S  +LD VKV+ YG   PLNQ+A ++V   + L 
Sbjct: 47  DDASDRMAKSVDSVRLNLQSVRTGRASAQILDRVKVDYYGVETPLNQMATISVPSAQQLS 106

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK  + ++E  I ES+LGL    +G ++RI +P  TE+RR  ++K+  +  E+ K+
Sbjct: 107 IDPYDKTSLNNIETAIVESDLGLTTNNDGSIIRINIPSMTEDRRKEMLKLCKSIGEEGKV 166

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRDG+D +KK  KS    ED +   ++ +QK+TD  +K ID     K+KE+M  
Sbjct: 167 AVRNIRRDGLDTIKKMEKSSDIGEDEMKDGQDTMQKLTDKNVKEIDEVVGAKEKEVMKV 225


>gi|119513540|ref|ZP_01632559.1| ribosome releasing factor [Nodularia spumigena CCY9414]
 gi|119461805|gb|EAW42823.1| ribosome releasing factor [Nodularia spumigena CCY9414]
          Length = 182

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 63/177 (35%), Positives = 105/177 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +  M  T+   ++   T+RTGR + S+LD V V+ YGS  PL  +AN++  +   +
Sbjct: 3   LSEAESTMQKTVEATQRAFNTIRTGRANASLLDKVSVDYYGSPTPLKSLANISTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +  VE+ I  S++GL P  +G V+R+ +P  T +RR   VK+A  YAE+ +
Sbjct: 63  LIQPYDKGSLNVVEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKMASKYAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD  D ++K  K+ + SED     ++ +QK+T+     ID    EK+K+I
Sbjct: 123 VAIRNIRRDVQDTIRKEEKASEISEDESKDQQDQLQKLTNKYTARIDDLLAEKEKDI 179


>gi|160900377|ref|YP_001565959.1| ribosome recycling factor [Delftia acidovorans SPH-1]
 gi|238687160|sp|A9BMM9|RRF_DELAS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|160365961|gb|ABX37574.1| ribosome recycling factor [Delftia acidovorans SPH-1]
          Length = 186

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +MG +I  LK ++  +RTGR +PS+LD + V+ YGS VPL+QVANV +L+ R + 
Sbjct: 8   KTTESKMGQSIEALKNNLARVRTGRANPSLLDSIHVDYYGSMVPLSQVANVNLLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A VE+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E SKI
Sbjct: 68  VQPWEKSMSAKVEKAIRESDLGLNPASLGDLIRVPMPPMSEERRKEMTKLARNEGEASKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + +KK  K  +ASED     E D+QK+TD  I  ID+    K+++IM  
Sbjct: 128 AVRNLRRDANEAVKKLVKDKEASEDDQKRCEADVQKMTDKHITEIDALVAAKEQDIMAV 186


>gi|169630269|ref|YP_001703918.1| ribosome recycling factor [Mycobacterium abscessus ATCC 19977]
 gi|238688906|sp|B1MDE3|RRF_MYCA9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169242236|emb|CAM63264.1| Ribosome recycling factor (Ribosome-releasing factor [Mycobacterium
           abscessus]
          Length = 185

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D  T+RTGR +P M   V ++ YG+  P+ QVA + V E RM+
Sbjct: 6   LLDAEEKMEKAVTVARDDFATIRTGRANPGMFQRVVIDYYGTPTPITQVAGINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LGLNP  +G ++R+ +P+ TEERR  LVK A    E +K
Sbjct: 66  VIKPYESNQLKAIEDAIRNSDLGLNPSNDGSIIRVAIPQLTEERRRELVKQAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR   D L + +K G+A ED V   E D+ K T   +  ID   + K+ E++  
Sbjct: 126 VTLRNIRRKANDELNRIKKDGEAGEDEVGRAEKDLDKTTAQYVSQIDELVKHKEGELLEV 185


>gi|294624553|ref|ZP_06703230.1| ribosome releasing factor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601159|gb|EFF45219.1| ribosome releasing factor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 185

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQTRMTKSIDALRHSLTTIRTGRASPALLDGIKVKAYGADTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H   E SK+
Sbjct: 67  ISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDSKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K    +ED     E+DIQK+TD  IK++D   + K++E+M  
Sbjct: 127 AIRNIRRDANQQVKDLLKDKAVTEDEARGAEDDIQKLTDKAIKDVDEVVKGKEQELMTV 185


>gi|94986827|ref|YP_594760.1| ribosome recycling factor [Lawsonia intracellularis PHE/MN1-00]
 gi|190360249|sp|Q1MRD7|RRF_LAWIP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|94731076|emb|CAJ54439.1| Ribosome recycling factor [Lawsonia intracellularis PHE/MN1-00]
          Length = 188

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
             + ++RM   I+ L+K+   LRTGR S S++D +KV+ YG+  P+NQ+A++ + +   +
Sbjct: 9   FLDSQERMVKAITSLEKEFTKLRTGRASTSIVDTIKVDYYGTPTPINQLASIAIPDSSSI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK     +E+ I +S LGL PI +G+++RI +P  TE+RR  LVK+A  Y E +K
Sbjct: 69  TIQPWDKTAFNPIEKAILKSELGLTPINDGKIIRITLPPLTEDRRKDLVKLARKYGEDTK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  + LK+  K+   SED +     DIQK+TD+ IK +++  + K+KEI+  
Sbjct: 129 IAIRNIRRDANEQLKRLEKNKFISEDELKGFTEDIQKMTDNYIKEVETHCKTKEKEIIEI 188


>gi|21230827|ref|NP_636744.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769174|ref|YP_243936.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188992321|ref|YP_001904331.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
           str. B100]
 gi|24418655|sp|Q8PAV6|RRF_XANCP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|81304866|sp|Q4USQ7|RRF_XANC8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229890170|sp|B0RW69|RRF_XANCB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21112430|gb|AAM40668.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574506|gb|AAY49916.1| ribosome recycling factor [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167734081|emb|CAP52287.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 185

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQTRMTKSIDALRHSLTTVRTGRASPALLDNIKVKAYGTDTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H   E +K+
Sbjct: 67  ISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K  + +ED     E+DIQK+TD  IK++D   + K++E+M  
Sbjct: 127 AIRNIRRDANQQVKDLLKDKQVTEDEARGAEDDIQKLTDKAIKDVDEVVKGKEQELMTV 185


>gi|329724306|gb|EGG60818.1| ribosome recycling factor [Staphylococcus epidermidis VCU144]
          Length = 184

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 121/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDII--KDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD++IK ID    +K+
Sbjct: 119 IGEDAKVSIRNIRRDINDQLKKDEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVTDKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|239636263|ref|ZP_04677265.1| ribosome recycling factor [Staphylococcus warneri L37603]
 gi|239597618|gb|EEQ80113.1| ribosome recycling factor [Staphylococcus warneri L37603]
 gi|330685682|gb|EGG97323.1| ribosome recycling factor [Staphylococcus epidermidis VCU121]
          Length = 184

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 123/186 (66%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ + RM  +I  L K++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDII--KDTRARMQKSIDNLSKELANISAGRANSNLLNGVNVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  VA +E+ I+ +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKSSVADIEKAINAANLGVNPTSDGEVIRISVPALTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD++IK ID   ++K+
Sbjct: 119 IGEDAKVSIRNIRRDVNDQLKKDEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVDDKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|161567479|ref|YP_321148.2| ribosome recycling factor [Anabaena variabilis ATCC 29413]
          Length = 187

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 108/180 (60%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++ L   + +M  T+   ++   T+RTGR + S+LD V V+ YGS  PL  +AN++  + 
Sbjct: 5   LVKLAEAESKMQHTVEATQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDA 64

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
             + +  +DK  +  +E+ I  S++GL P  +G  +R+ +P  T +RR  LVK+A  YAE
Sbjct: 65  TTIQIQPYDKTSLNIIEKAISLSDVGLTPSNDGSAIRLNIPPLTSDRRKELVKLAAKYAE 124

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           + ++++RNIRRD +D ++K  K+ + SED     ++ +QK+T+     ID    EK+K+I
Sbjct: 125 EGRVAIRNIRRDAIDSIRKQEKNAEVSEDEAKDQQDKLQKLTNKYTARIDELLAEKEKDI 184


>gi|257082024|ref|ZP_05576385.1| ribosome recycling factor [Enterococcus faecalis E1Sol]
 gi|256990054|gb|EEU77356.1| ribosome recycling factor [Enterococcus faecalis E1Sol]
          Length = 185

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L++++  +R GR + S+LD ++VE YG+  P+NQ+A++ + E R+L
Sbjct: 6   LATAKEKMTKAEEGLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A +E+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE SK
Sbjct: 66  MITPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD MD LKK++K+G  +ED + S E D+QK+TD +IKNID+   EK++E++  
Sbjct: 126 VAVRNVRRDAMDELKKAQKNGDITEDELRSFEKDVQKLTDDSIKNIDAITAEKEQELLEV 185


>gi|120403212|ref|YP_953041.1| ribosome recycling factor [Mycobacterium vanbaalenii PYR-1]
 gi|166230806|sp|A1T785|RRF_MYCVP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119956030|gb|ABM13035.1| ribosome recycling factor [Mycobacterium vanbaalenii PYR-1]
          Length = 185

 Score =  234 bits (598), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D+ ++RTGR +P M + + V+ YG+  P+ Q++++ V E RM+
Sbjct: 6   LFDAEEKMEKAVAVARDDLASIRTGRANPGMFNRIHVDYYGAVTPITQLSSINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   +  +E  I  S+LG+NP  +G V+R+ +P+ TEERR  LVK A    E +K
Sbjct: 66  VIKPYEASQLRPIEDAIRNSDLGVNPTNDGNVIRVSIPQLTEERRRDLVKQAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + +K G A ED VA  E D+ K T      ID   + K+ E++  
Sbjct: 126 VSVRNIRRKAMEELTRIKKDGDAGEDDVARAEKDLDKTTQQYTHQIDELVKHKEGELLEV 185


>gi|257055044|ref|YP_003132876.1| ribosome recycling factor [Saccharomonospora viridis DSM 43017]
 gi|256584916|gb|ACU96049.1| ribosome recycling factor [Saccharomonospora viridis DSM 43017]
          Length = 185

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +SF K+++ ++RTGR +P+M   + VE YG+  PLNQ+A+V + E RM 
Sbjct: 6   LFDAEEKMEKAVSFAKEELASVRTGRATPAMFSRIVVEYYGAPTPLNQLASVNIPEARMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +A++E+ I ES+LG+NP  +G ++R+ +P+ TEERR  +VK+A    E+++
Sbjct: 66  IIKPYDGSQLANIEKAIRESDLGVNPTNDGSIIRVVIPQLTEERRKEMVKIAKGKGEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R IRR   + L +  K G+A ED VA  E ++Q +TD  +  +D   + K+ E++  
Sbjct: 126 ISIRGIRRKAKEELDRIAKDGEAGEDEVARAEKELQNLTDRYVHQVDELVKNKEAELLEV 185


>gi|22537655|ref|NP_688506.1| ribosome recycling factor [Streptococcus agalactiae 2603V/R]
 gi|25011612|ref|NP_736007.1| ribosome recycling factor [Streptococcus agalactiae NEM316]
 gi|76788564|ref|YP_330142.1| ribosome recycling factor [Streptococcus agalactiae A909]
 gi|76799120|ref|ZP_00781307.1| ribosome recycling factor [Streptococcus agalactiae 18RS21]
 gi|77405174|ref|ZP_00782272.1| ribosome recycling factor [Streptococcus agalactiae H36B]
 gi|77411699|ref|ZP_00788038.1| ribosome recycling factor [Streptococcus agalactiae CJB111]
 gi|77413972|ref|ZP_00790145.1| ribosome recycling factor [Streptococcus agalactiae 515]
 gi|54039298|sp|P66741|RRF_STRA5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|54042006|sp|P66740|RRF_STRA3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123601478|sp|Q3K011|RRF_STRA1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|22534542|gb|AAN00379.1|AE014261_7 ribosome recycling factor [Streptococcus agalactiae 2603V/R]
 gi|24413152|emb|CAD47230.1| ribosome recycling factor [Streptococcus agalactiae NEM316]
 gi|76563621|gb|ABA46205.1| ribosome recycling factor [Streptococcus agalactiae A909]
 gi|76585524|gb|EAO62095.1| ribosome recycling factor [Streptococcus agalactiae 18RS21]
 gi|77159952|gb|EAO71090.1| ribosome recycling factor [Streptococcus agalactiae 515]
 gi|77162271|gb|EAO73243.1| ribosome recycling factor [Streptococcus agalactiae CJB111]
 gi|77176176|gb|EAO78947.1| ribosome recycling factor [Streptococcus agalactiae H36B]
 gi|319745486|gb|EFV97790.1| ribosome recycling factor [Streptococcus agalactiae ATCC 13813]
          Length = 185

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   ++R   +   L ++   +R GR + S+LD ++VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   VTKAQERFEQSHQSLSREFAGIRAGRANASLLDRIQVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERAINESDLGINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K+ + +ED + SLE DIQK TD  +K+ID     K+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKNKEITEDDLKSLEKDIQKATDDAVKHIDEMTANKEKELLEV 185


>gi|154500382|ref|ZP_02038420.1| hypothetical protein BACCAP_04049 [Bacteroides capillosus ATCC
           29799]
 gi|150270887|gb|EDM98170.1| hypothetical protein BACCAP_04049 [Bacteroides capillosus ATCC
           29799]
          Length = 184

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+    +    +M  T+  +K D  ++R GR + ++LD + V+ YG   PLNQV  ++ 
Sbjct: 1   MNEAN--KEFDAKMQKTVDVVKSDFASVRAGRANAAVLDKITVDYYGVPTPLNQVGGISS 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +PR LV+  WD +++  +E+ I  S+LG+NP  +G+V+R+  P+ TEERR  L K    
Sbjct: 59  PDPRSLVIQPWDTKLLKDIEKAIQTSDLGINPQNDGRVIRLNFPQLTEERRKDLTKQVRK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE  K+++RNIRRD MD  K   K  + +ED    LE ++Q +TD   K ID   E+K+
Sbjct: 119 YAEAGKVAIRNIRRDAMDKFKAMEKKSEITEDDRKELEKELQDLTDKRCKQIDELTEKKE 178

Query: 181 KEIMHF 186
            E+M  
Sbjct: 179 AELMAV 184


>gi|304439992|ref|ZP_07399885.1| ribosome recycling factor [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371484|gb|EFM25097.1| ribosome recycling factor [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 184

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 116/178 (65%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             +D+M  +I  LK D++++R GR +P++LD + VE YG   PLNQVA ++  E R+LVV
Sbjct: 7   EAEDKMKKSIEVLKDDLLSIRAGRANPALLDKITVEYYGQVTPLNQVAGISAPEARLLVV 66

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WD+ +++ +E+ I +S+LGLNP  +G+V+R+ +P+ TEERR  L K+     E +K++
Sbjct: 67  QPWDQSLISVIEKEILKSDLGLNPSNDGKVVRLIIPQLTEERRRDLTKIVKKNGEDTKVA 126

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRR  +D +KK  K  + SED     E+ +Q++TD  IK +D   + K+ E+M  
Sbjct: 127 IRNIRRVAIDEVKKLEKDKEISEDERKVAEDKVQELTDKYIKEVDVVTKAKEDELMEI 184


>gi|240146850|ref|ZP_04745451.1| ribosome recycling factor [Roseburia intestinalis L1-82]
 gi|257200994|gb|EEU99278.1| ribosome recycling factor [Roseburia intestinalis L1-82]
 gi|291536044|emb|CBL09156.1| ribosome recycling factor [Roseburia intestinalis M50/1]
 gi|291538537|emb|CBL11648.1| ribosome recycling factor [Roseburia intestinalis XB6B4]
          Length = 184

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  T++ L ++  ++R GR +P +LD +KV+ YG+   + QVANV V EPRM+
Sbjct: 5   LVQFDEKMQKTMNNLSEEFGSIRAGRANPHVLDKLKVDYYGTPTAIQQVANVNVPEPRMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  MV  +E+ I  S+LG+NP  +G+V+R+  PE TEERR  L K      E +K
Sbjct: 65  QIQPWEASMVKEIEKAILTSDLGINPTNDGKVIRLLFPELTEERRKELAKDVKKKGENAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D  KK  KS   SED V  LE+  QK+TD  I  ID   E K KEI+  
Sbjct: 125 VAIRNIRRDANDSFKKLSKSADVSEDEVKELEDGAQKMTDKYITEIDKAVEAKTKEILTV 184


>gi|121608413|ref|YP_996220.1| ribosome recycling factor [Verminephrobacter eiseniae EF01-2]
 gi|166231526|sp|A1WHU5|RRF_VEREI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|121553053|gb|ABM57202.1| ribosome recycling factor [Verminephrobacter eiseniae EF01-2]
          Length = 186

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 73/177 (41%), Positives = 115/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM  +I+  + ++  +RTGR +P++LD V+V+ YG+ VPL+QVANV +++ R + 
Sbjct: 8   KHAATRMDQSIAAFRNNLQKIRTGRANPALLDAVQVDYYGALVPLSQVANVALIDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A +E+ I +S+LGLNP   G ++R+P+P  ++ERR  + K+A    E +KI
Sbjct: 68  VQPWEKGMGAKIEKAIRDSDLGLNPAAMGDLIRVPMPPMSQERRKEMTKLARNEGESAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +VRN+RRD  + +KK  K   ASED     E ++QK TD  I  ID+    K++EIM
Sbjct: 128 AVRNLRRDANESIKKLVKDKLASEDEQKRAETEVQKFTDKHIAEIDALVAAKEQEIM 184


>gi|302554446|ref|ZP_07306788.1| ribosome recycling factor [Streptomyces viridochromogenes DSM
           40736]
 gi|302472064|gb|EFL35157.1| ribosome recycling factor [Streptomyces viridochromogenes DSM
           40736]
          Length = 185

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAPTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +K
Sbjct: 66  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREYIKVAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R++RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 126 ISIRSVRRKAKEAIDKLIKDGEVGEDEGRRAEKELDDTTAKYVTQVDELLKHKEAELLEV 185


>gi|227549021|ref|ZP_03979070.1| ribosome recycling factor [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078875|gb|EEI16838.1| ribosome recycling factor [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 185

 Score =  234 bits (598), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRM   +   +++++++RTGR +P+M + V  + YG+  P+NQ+A V+V EPRML
Sbjct: 6   LLDSEDRMSKAVEHTREELVSIRTGRANPAMFNGVVADFYGAPTPINQMATVSVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +  +   I  S+LG+NP  +GQV+R+ VP+ TEERR  LVK A    E+ K
Sbjct: 66  LIKPFDMSTLNEILNAIRNSDLGVNPTDDGQVIRVTVPQLTEERRRELVKQAKQKGEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR GM+ LKK +K G A ED V + E  + K T   +  +D    +K+ E++  
Sbjct: 126 VAIRNVRRQGMEALKKIQKDGDAGEDEVKTAEQALDKTTARYVAQVDEIVSKKEAELLEV 185


>gi|258423900|ref|ZP_05686785.1| ribosome recycling factor [Staphylococcus aureus A9635]
 gi|257845929|gb|EEV69958.1| ribosome recycling factor [Staphylococcus aureus A9635]
          Length = 184

 Score =  234 bits (597), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I+    K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDIIN--ETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR   VK    
Sbjct: 59  PEARLLVISPYDKSSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++K+SVRNIRRD  D LKK  K+G  +ED + S   D+QK TD++IK ID    +K+
Sbjct: 119 IGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|328950711|ref|YP_004368046.1| Ribosome-recycling factor [Marinithermus hydrothermalis DSM 14884]
 gi|328451035|gb|AEB11936.1| Ribosome-recycling factor [Marinithermus hydrothermalis DSM 14884]
          Length = 185

 Score =  234 bits (597), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 74/176 (42%), Positives = 112/176 (63%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             +  M  T+   + ++  LRTGR +P++L  +KVE YGS +PLNQVA+V+  + R LVV
Sbjct: 8   EARAHMQKTVEAFEANLGGLRTGRANPALLAHLKVEYYGSVMPLNQVASVSAPDARTLVV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WD+  + ++E+ I ES+LGLNP   G  L I +P  TEERR  + + A  YAE+++I+
Sbjct: 68  QAWDQNALPAIEKAIRESDLGLNPNNRGDALYIQIPPLTEERRKEIARTARGYAEEARIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           VRN RR+ +D +KK  K    SED     ++++QKIT+  I  ID+  E+K+ EI+
Sbjct: 128 VRNARREALDQIKKLEKEKLLSEDEAKRAQDEVQKITNEFIDKIDAILEKKEHEIL 183


>gi|242373550|ref|ZP_04819124.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           M23864:W1]
 gi|242348913|gb|EES40515.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           M23864:W1]
          Length = 184

 Score =  234 bits (597), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 123/186 (66%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A+++V
Sbjct: 1   MSDII--KDTKARMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASISV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  V  +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKTSVDDIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  DHLKK  K+G  +ED + S  +D+QK TD++IK ID   ++K+
Sbjct: 119 IGEDAKVSIRNIRRDINDHLKKQEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVDDKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|217964539|ref|YP_002350217.1| ribosome recycling factor [Listeria monocytogenes HCC23]
 gi|290893573|ref|ZP_06556556.1| ribosome recycling factor [Listeria monocytogenes FSL J2-071]
 gi|315282161|ref|ZP_07870629.1| ribosome recycling factor [Listeria marthii FSL S4-120]
 gi|254809517|sp|B8DG13|RRF_LISMH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|217333809|gb|ACK39603.1| ribosome recycling factor [Listeria monocytogenes HCC23]
 gi|290556918|gb|EFD90449.1| ribosome recycling factor [Listeria monocytogenes FSL J2-071]
 gi|307570895|emb|CAR84074.1| frr [Listeria monocytogenes L99]
 gi|313608995|gb|EFR84735.1| ribosome recycling factor [Listeria monocytogenes FSL F2-208]
 gi|313614193|gb|EFR87869.1| ribosome recycling factor [Listeria marthii FSL S4-120]
          Length = 185

 Score =  234 bits (597), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  KSG  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEELKKLEKSGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 185


>gi|16803354|ref|NP_464839.1| ribosome recycling factor [Listeria monocytogenes EGD-e]
 gi|46907540|ref|YP_013929.1| ribosome recycling factor [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47094294|ref|ZP_00231999.1| ribosome recycling factor [Listeria monocytogenes str. 4b H7858]
 gi|47096939|ref|ZP_00234516.1| ribosome recycling factor [Listeria monocytogenes str. 1/2a F6854]
 gi|224501742|ref|ZP_03670049.1| ribosome recycling factor [Listeria monocytogenes FSL R2-561]
 gi|226223915|ref|YP_002758022.1| ribosome recycling factor [Listeria monocytogenes Clip81459]
 gi|254824627|ref|ZP_05229628.1| ribosome recycling factor [Listeria monocytogenes FSL J1-194]
 gi|254828675|ref|ZP_05233362.1| ribosome recycling factor [Listeria monocytogenes FSL N3-165]
 gi|254829929|ref|ZP_05234584.1| ribosome recycling factor [Listeria monocytogenes 10403S]
 gi|254852635|ref|ZP_05241983.1| ribosome recycling factor [Listeria monocytogenes FSL R2-503]
 gi|254898521|ref|ZP_05258445.1| ribosome recycling factor [Listeria monocytogenes J0161]
 gi|254911988|ref|ZP_05262000.1| ribosome recycling factor [Listeria monocytogenes J2818]
 gi|254932371|ref|ZP_05265730.1| ribosome recycling factor [Listeria monocytogenes HPB2262]
 gi|254936315|ref|ZP_05268012.1| ribosome recycling factor [Listeria monocytogenes F6900]
 gi|254992874|ref|ZP_05275064.1| ribosome recycling factor [Listeria monocytogenes FSL J2-064]
 gi|255026995|ref|ZP_05298981.1| ribosome recycling factor [Listeria monocytogenes FSL J2-003]
 gi|255522289|ref|ZP_05389526.1| ribosome recycling factor [Listeria monocytogenes FSL J1-175]
 gi|284801699|ref|YP_003413564.1| hypothetical protein LM5578_1453 [Listeria monocytogenes 08-5578]
 gi|284994841|ref|YP_003416609.1| hypothetical protein LM5923_1406 [Listeria monocytogenes 08-5923]
 gi|300765446|ref|ZP_07075428.1| ribosome recycling factor [Listeria monocytogenes FSL N1-017]
 gi|22001941|sp|Q8Y7G7|RRF_LISMO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|60390258|sp|Q720A8|RRF_LISMF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|259494548|sp|C1L2M0|RRF_LISMC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|16410730|emb|CAC99392.1| frr [Listeria monocytogenes EGD-e]
 gi|46880808|gb|AAT04106.1| ribosome recycling factor [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47014699|gb|EAL05655.1| ribosome recycling factor [Listeria monocytogenes str. 1/2a F6854]
 gi|47017338|gb|EAL08166.1| ribosome recycling factor [Listeria monocytogenes str. 4b H7858]
 gi|225876377|emb|CAS05086.1| Putative ribosome recycling factor [Listeria monocytogenes serotype
           4b str. CLIP 80459]
 gi|258601078|gb|EEW14403.1| ribosome recycling factor [Listeria monocytogenes FSL N3-165]
 gi|258605951|gb|EEW18559.1| ribosome recycling factor [Listeria monocytogenes FSL R2-503]
 gi|258608905|gb|EEW21513.1| ribosome recycling factor [Listeria monocytogenes F6900]
 gi|284057261|gb|ADB68202.1| hypothetical protein LM5578_1453 [Listeria monocytogenes 08-5578]
 gi|284060308|gb|ADB71247.1| hypothetical protein LM5923_1406 [Listeria monocytogenes 08-5923]
 gi|293583927|gb|EFF95959.1| ribosome recycling factor [Listeria monocytogenes HPB2262]
 gi|293589952|gb|EFF98286.1| ribosome recycling factor [Listeria monocytogenes J2818]
 gi|293593865|gb|EFG01626.1| ribosome recycling factor [Listeria monocytogenes FSL J1-194]
 gi|300513883|gb|EFK40948.1| ribosome recycling factor [Listeria monocytogenes FSL N1-017]
 gi|328468599|gb|EGF39599.1| ribosome recycling factor [Listeria monocytogenes 1816]
 gi|328475037|gb|EGF45825.1| ribosome recycling factor [Listeria monocytogenes 220]
 gi|332311757|gb|EGJ24852.1| Ribosome-recycling factor [Listeria monocytogenes str. Scott A]
          Length = 185

 Score =  234 bits (597), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 185


>gi|51245009|ref|YP_064893.1| ribosome recycling factor [Desulfotalea psychrophila LSv54]
 gi|60390247|sp|Q6AP38|RRF_DESPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|50876046|emb|CAG35886.1| probable ribosome recycling factor [Desulfotalea psychrophila
           LSv54]
          Length = 184

 Score =  234 bits (597), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 121/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++VI    +  RM  ++   K D+  +RTGR S S+LD + V AYGS +PLNQVA +T+
Sbjct: 1   MSEVI--VEMSGRMAKSVEAFKNDLSRVRTGRASISILDDITVVAYGSTMPLNQVATLTI 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  WD +M+  +E+ I +S LGLNP+ +G+V+R+ +P+ TE+RR  LVK    
Sbjct: 59  PESRMIALQPWDPQMIPPIEKAILKSGLGLNPVNDGKVVRLNIPQLTEDRRKDLVKQVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++++RN+RRD +D LK  +K  + SED +  L++D QK TD  IK +D     K+
Sbjct: 119 IAEEFRVAIRNVRRDAIDTLKLQKKDKEISEDDLFKLQDDAQKETDIYIKQLDEVSASKE 178

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 179 KEVMEV 184


>gi|146278188|ref|YP_001168347.1| ribosome recycling factor [Rhodobacter sphaeroides ATCC 17025]
 gi|190360248|sp|A4WUH8|RRF_RHOS5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145556429|gb|ABP71042.1| ribosome recycling factor [Rhodobacter sphaeroides ATCC 17025]
          Length = 188

 Score =  234 bits (597), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 84/182 (46%), Positives = 127/182 (69%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL  I+ RM   +  L+ +  +LRTGR S S+L+ + V+AYG   PLNQ+  + V EPR
Sbjct: 8   IDLDAIQRRMDGAMHALRTEFGSLRTGRASASILEPIHVDAYGQQTPLNQLGTINVPEPR 67

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+V++VWDK M++ VER I +S +G+NP+V+G ++R+P+PE  EERR  L KVA  YAE+
Sbjct: 68  MVVINVWDKGMISKVERAIRDSGIGINPVVDGPIIRLPIPELNEERRKELTKVAAHYAEQ 127

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++ +G  +ED      +++Q +TD  I  +D   EEK+KEIM
Sbjct: 128 ARVAIRNVRRDGMDQIKKAKAAG-MAEDDQKMWSDEVQALTDKAIAAVDKALEEKQKEIM 186

Query: 185 HF 186
             
Sbjct: 187 QV 188


>gi|313619142|gb|EFR90928.1| ribosome recycling factor [Listeria innocua FSL S4-378]
          Length = 176

 Score =  234 bits (597), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 75/176 (42%), Positives = 120/176 (68%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML+++ 
Sbjct: 1   KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISVPEARMLLITP 60

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K++VR
Sbjct: 61  YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVR 120

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 121 NIRREANEDLKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 176


>gi|77463257|ref|YP_352761.1| ribosome recycling factor [Rhodobacter sphaeroides 2.4.1]
 gi|123592078|sp|Q3J2X4|RRF_RHOS4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|77387675|gb|ABA78860.1| ribosome recycling factor [Rhodobacter sphaeroides 2.4.1]
          Length = 188

 Score =  234 bits (597), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 85/182 (46%), Positives = 126/182 (69%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL  I+ RM   +  L+ +  +LRTGR S S+L+ + V+AYG   PLNQ+  + V EPR
Sbjct: 8   IDLDAIQRRMDGAMHALRTEFGSLRTGRASASILEPIHVDAYGQQTPLNQLGTINVPEPR 67

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+V++VWDK M++ VER I +S +G+NP+V+G ++R+P+PE  EERR  L KVA  YAE+
Sbjct: 68  MVVINVWDKGMISKVERAIRDSGIGINPVVDGPIIRLPIPELNEERRKELSKVAAHYAEQ 127

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK+ KS   +ED      +++Q +TD  I  +D   EEK+KEIM
Sbjct: 128 ARVAIRNVRRDGMDQIKKA-KSVGMAEDDQKMWSDEVQALTDKAIAAVDKALEEKQKEIM 186

Query: 185 HF 186
             
Sbjct: 187 QV 188


>gi|304391648|ref|ZP_07373590.1| ribosome recycling factor [Ahrensia sp. R2A130]
 gi|303295877|gb|EFL90235.1| ribosome recycling factor [Ahrensia sp. R2A130]
          Length = 186

 Score =  234 bits (597), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 85/186 (45%), Positives = 123/186 (66%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   IDL++++ RM  +++   KD+  LRTGR S S+LD V V+AYG  +P+NQVANV  
Sbjct: 1   MADGIDLKDVEKRMETSLASFTKDLGGLRTGRASASLLDPVMVDAYGQKMPINQVANVGA 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP+++ V +WDK MV  VE+ + E+ LGLNP+V+GQ LRIP+P+  EERR  LVKVA  
Sbjct: 61  PEPKLITVQIWDKSMVGPVEKAVREAGLGLNPVVDGQNLRIPMPDLNEERRRDLVKVAKT 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE +K+++R++RRD M+ LKK+ K  +  +D        +QK+TD  +  +D     K+
Sbjct: 121 YAEDAKVTIRHVRRDAMETLKKAEKDKEIGQDEARGSSEKVQKMTDDKVNEVDKVLATKE 180

Query: 181 KEIMHF 186
            EIM  
Sbjct: 181 GEIMQV 186


>gi|238916787|ref|YP_002930304.1| ribosome recycling factor [Eubacterium eligens ATCC 27750]
 gi|238872147|gb|ACR71857.1| ribosome recycling factor [Eubacterium eligens ATCC 27750]
          Length = 187

 Score =  234 bits (597), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 72/181 (39%), Positives = 118/181 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           ++++I+ RM  ++  LK++ +T+R GR +P +LD ++V+ YG+  P+ QVANV+V E RM
Sbjct: 7   NIKDIEGRMQKSVDNLKEEYVTIRAGRANPHILDRLRVDYYGTPTPIQQVANVSVPEARM 66

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + +  W+  ++  +E+ I  S+LGL P  +G+ +R+  PE TE+RR  L K      + +
Sbjct: 67  IQIQPWEASLIKDIEKAILVSDLGLTPNNDGKTIRLVFPELTEDRRKELAKDIKKKGDNA 126

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++RNIRRD  D +KK  K+G  S+D   + E++IQKITD  I  IDS  ++K KEI+ 
Sbjct: 127 KVAIRNIRRDANDAIKKENKAGDISDDEAKNSEDEIQKITDKYIAMIDSAIDDKTKEILT 186

Query: 186 F 186
            
Sbjct: 187 V 187


>gi|295110296|emb|CBL24249.1| ribosome recycling factor [Ruminococcus obeum A2-162]
          Length = 183

 Score =  234 bits (597), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 116/180 (64%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +M  T++  ++++ T+R GR +P +LD + V+ YGS  PL QVAN+TV E RM+
Sbjct: 5   VQKYEQKMTKTLNGFEEELTTIRAGRANPHILDKITVDYYGSPTPLQQVANITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++ S+E+ I  S+LGLNP  +G+++R+ +PE TEERR  LVK      E +K
Sbjct: 65  QIQPWESSLIKSIEKAILTSDLGLNPSNDGKLIRLVLPELTEERRKELVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D  KK  K    SED +  LE+ +QK+TD  IK ID+  + K KEI+  
Sbjct: 125 VAVRNIRRDANDAFKKLTKQ-DVSEDEIKDLEDSVQKLTDKFIKKIDAAVDTKAKEILTV 183


>gi|319948055|ref|ZP_08022229.1| ribosome recycling factor [Dietzia cinnamea P4]
 gi|319438294|gb|EFV93240.1| ribosome recycling factor [Dietzia cinnamea P4]
          Length = 185

 Score =  233 bits (596), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +  ++ ++ ++RTGR +P M + V  E YG+  P+ Q++++TV EPRML
Sbjct: 6   LLEAEEKMERALEHVRDELASIRTGRANPGMFNRVLCEYYGTLTPITQMSSITVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++   +  +E  I  S+LG+NP  +GQVLR+ VP+ TEERR  LVK A A AE  +
Sbjct: 66  IIKPYEMSQIGPIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRRDLVKQAKAKAEDGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VR +RR  MD LK+ +K G+A ED V + E ++ K+T   + ++D   + K+ E+M  
Sbjct: 126 IAVRGVRRKAMDELKRIQKDGEAGEDEVTAAEKELDKLTQRYVADVDDLVKVKEGELMEV 185


>gi|239928669|ref|ZP_04685622.1| ribosome recycling factor [Streptomyces ghanaensis ATCC 14672]
          Length = 186

 Score =  233 bits (596), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 7   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA A  E +K
Sbjct: 67  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREFIKVAKAKGEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R +RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 127 VSIRAVRRKAKDAIDKLIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 186


>gi|268610455|ref|ZP_06144182.1| ribosome recycling factor [Ruminococcus flavefaciens FD-1]
          Length = 184

 Score =  233 bits (596), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M + I+    K++M   I+ L  +  ++R GR +PS+LD V V+ YG+  P+NQ+A V+V
Sbjct: 1   MKETIN--QAKEKMTKCINSLGNEFASIRAGRANPSVLDKVTVDYYGAPTPINQLAAVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R LV+S W+K  + ++E+ I  S++G+NP  +G V+R+  P+ TE+RR  L K    
Sbjct: 59  SEGRTLVISPWEKPQLKAIEKAIQASDIGINPTNDGNVIRLTFPQLTEDRRKELAKEIKG 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K++VRN RRD M+ LKK +K+ + +ED +A  E  +QKITD  I +ID    +K+
Sbjct: 119 LGEKAKVTVRNARRDTMEKLKKMKKNSEITEDELADGEKKVQKITDGFIDDIDKAVADKE 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMTV 184


>gi|118617645|ref|YP_905977.1| ribosome recycling factor [Mycobacterium ulcerans Agy99]
 gi|166230805|sp|A0PQ87|RRF_MYCUA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118569755|gb|ABL04506.1| ribosome recycling factor Frr [Mycobacterium ulcerans Agy99]
          Length = 185

 Score =  233 bits (596), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  ++DM T+RTGR +P M   + ++ YG+H P+ Q+A++ V E RM+
Sbjct: 6   LFDAEEKMEKAVSVAREDMATIRTGRANPGMFSRIVIDYYGTHTPITQLASINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A    E+++
Sbjct: 66  VIKPYEANQLHAIETAIRNSDLGVNPTNDGTIIRVAVPQLTEERRRDLVKQAKHKGEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + RK G+A ED VA  E D+ K T   +  ID   + K+ +++  
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVARAEKDLDKSTHQYVAQIDELVKHKEGDLLEV 185


>gi|134102473|ref|YP_001108134.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
 gi|291004136|ref|ZP_06562109.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
 gi|166231222|sp|A4FMD4|RRF_SACEN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|133915096|emb|CAM05209.1| ribosome recycling factor [Saccharopolyspora erythraea NRRL 2338]
          Length = 185

 Score =  233 bits (596), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K ++ T+RTGR +P+M   + V+ YGS  PLNQ+A+++V E R++
Sbjct: 6   LLEGEEKMQKAVEVAKDELATVRTGRANPAMFSGIVVDYYGSPTPLNQLASISVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   + ++E+ I +S+LG+NP  +GQ++R+ +P+ TEERR  +VK+A    E+ +
Sbjct: 66  VIKPYDASQLGAMEKAIRDSDLGVNPSNDGQLIRVSIPQMTEERRKEMVKLAKHKGEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VR IRR   + + +  K G+A ED     E +++ +T   +  ID   + K+ E++  
Sbjct: 126 ITVRGIRRKVKEEIDRIVKDGEAGEDEGTRGEKELENLTHRYVAQIDELVKHKEAELLEV 185


>gi|254439528|ref|ZP_05053022.1| ribosome recycling factor [Octadecabacter antarcticus 307]
 gi|198254974|gb|EDY79288.1| ribosome recycling factor [Octadecabacter antarcticus 307]
          Length = 187

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 84/185 (45%), Positives = 120/185 (64%), Gaps = 1/185 (0%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++D  ++  RM   I+ L+ +  +LRTGR S S+L+ + V+AYGS  P+NQV  V V 
Sbjct: 4   DFILDTDDLTRRMDGAIANLRVEFASLRTGRASASILEPIMVDAYGSQTPINQVGTVNVP 63

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E RM+ V+VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y
Sbjct: 64  ESRMVTVNVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTQLTKVAGTY 123

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE  ++S+RN+RRDGMD +KK++  G  SED     E ++Q +T+  IK ID   E K+ 
Sbjct: 124 AENGRVSIRNLRRDGMDQIKKAKNDG-ISEDDQKFWEGEMQGLTNDYIKRIDDQLEIKQA 182

Query: 182 EIMHF 186
           EIM  
Sbjct: 183 EIMQV 187


>gi|322372351|ref|ZP_08046887.1| ribosome recycling factor [Streptococcus sp. C150]
 gi|321277393|gb|EFX54462.1| ribosome recycling factor [Streptococcus sp. C150]
          Length = 185

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD + VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFAHSHESLAREFGSIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKGSIADIERAINESDLGINPANDGSVVRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K  + +ED +  LE DIQK TD  +K IDS   EK+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKDKEITEDQLKGLEKDIQKATDDAVKKIDSMTAEKEKELLTV 185


>gi|210615979|ref|ZP_03290879.1| hypothetical protein CLONEX_03098 [Clostridium nexile DSM 1787]
 gi|210149984|gb|EEA80993.1| hypothetical protein CLONEX_03098 [Clostridium nexile DSM 1787]
          Length = 185

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 80/186 (43%), Positives = 114/186 (61%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+   LQ    +M  T+  L  ++ T+R GR +P +LD + V+ YGS  P+ QVAN++V
Sbjct: 3   MNE--KLQVYDTKMQKTLHSLDAELATIRAGRANPHILDKLTVDYYGSATPIQQVANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+K MV  +E+ I  S++G+NP  +G V+R+  PE TEERR  LVK    
Sbjct: 61  PEARMIQIQPWEKSMVKEIEKAILTSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRNIRRDG D  KK  K    SED +  LE ++QK+TD  IK +D   E K 
Sbjct: 121 KGEAAKVAVRNIRRDGNDAFKKL-KGSDVSEDEIKGLEEELQKLTDKYIKEVDKSVEAKS 179

Query: 181 KEIMHF 186
           KE++  
Sbjct: 180 KEVLTV 185


>gi|166031004|ref|ZP_02233833.1| hypothetical protein DORFOR_00685 [Dorea formicigenerans ATCC
           27755]
 gi|166029271|gb|EDR48028.1| hypothetical protein DORFOR_00685 [Dorea formicigenerans ATCC
           27755]
          Length = 183

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 80/186 (43%), Positives = 118/186 (63%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+   L+    +M  T+  L  +M T+R GR +P++L+ + V+ YG+  P+ QVANV+V
Sbjct: 1   MNE--KLKVYDTKMQKTMDSLDSEMGTIRAGRANPNVLNRIMVDYYGTPTPIQQVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+ +  W+K M+  +E+ I  S+LG+NP  +G  +R+  PE TEERR  LVK    
Sbjct: 59  PEPRMIQIQPWEKSMLKVIEKAIMVSDLGINPTNDGTAVRLIFPELTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+++RNIRRDG D  KK  K    SED + +LE+++QK+TD  +K IDS  E K 
Sbjct: 119 KGEAAKVAIRNIRRDGNDAFKKL-KGSDVSEDEIKNLEDELQKMTDKYVKEIDSAVEVKS 177

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 178 KEVMTV 183


>gi|319892274|ref|YP_004149149.1| Ribosome recycling factor [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161970|gb|ADV05513.1| Ribosome recycling factor [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464629|gb|ADX76782.1| ribosome recycling factor [Staphylococcus pseudintermedius ED99]
          Length = 184

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 78/186 (41%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M ++I  Q+ K RM  +   L +++  +  GR + ++L  V+V+ YG+  P+ Q+A++ V
Sbjct: 1   MKEII--QDAKTRMKKSTENLSRELAQINAGRANSNLLAGVQVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LVVS +DK  +A +E+ I  +NLG+NP  +G V+RI VP  TEERR  +VK    
Sbjct: 59  PEARLLVVSPYDKTSLADIEKAIIAANLGVNPTSDGDVIRIMVPALTEERRKEIVKEVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  D LK+  K G  SED + +  +++QKITDS+IK ID    +K+
Sbjct: 119 TGENAKVSIRNIRRDANDTLKRQEKDGDISEDELRNGSDEVQKITDSSIKEIDQLVADKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|157376290|ref|YP_001474890.1| ribosome recycling factor [Shewanella sediminis HAW-EB3]
 gi|189044077|sp|A8FY39|RRF_SHESH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157318664|gb|ABV37762.1| ribosome recycling factor [Shewanella sediminis HAW-EB3]
          Length = 185

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + K RM   +   K  M  +RTGR  PS+LD +KV  YGS  PL QV NV++ + R L 
Sbjct: 7   NDAKSRMEKCVESTKTQMAKVRTGRAHPSLLDTIKVSYYGSMTPLKQVGNVSIEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+V+D  M+ +VE+ I  S+LGLNP+  G  +RIP+P  TEERR  L+KV  A AE  +I
Sbjct: 67  VNVFDSTMIQAVEKAIMSSDLGLNPMSAGATIRIPLPALTEERRKDLIKVVRAEAENGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD    +K   K  + +ED V   E+D+QK TD+ IK ID     K+ E+M  
Sbjct: 127 AVRNVRRDANSDVKSLEKEKECTEDDVRRTEDDVQKFTDAHIKLIDEILTAKEAELMEV 185


>gi|328543714|ref|YP_004303823.1| ribosome-recycling factor [polymorphum gilvum SL003B-26A1]
 gi|326413458|gb|ADZ70521.1| Ribosome-recycling factor [Polymorphum gilvum SL003B-26A1]
          Length = 173

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 92/173 (53%), Positives = 125/173 (72%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +S LK ++  LRTGR S SM+D + V AYG  +P+NQVA V+V EPRM+ V VWDK
Sbjct: 1   MQGALSVLKTELAGLRTGRASSSMMDAIVVNAYGQSMPINQVATVSVPEPRMVAVQVWDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            MV +VER I ESNLGLNP+V+GQ+LR+P+PE  +ERR  L+KVAH YAE++K+++R++R
Sbjct: 61  SMVGAVERAIRESNLGLNPVVDGQLLRLPIPELNQERRQELIKVAHKYAEQAKVAIRHVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RDGMD +KK  K G  S+D      +D+QK+TD  I  +DS  E+K++EI   
Sbjct: 121 RDGMDMIKKLEKDGAISQDDSRVAADDVQKLTDREIAEVDSMLEKKQQEISQV 173


>gi|291436992|ref|ZP_06576382.1| ribosome recycling factor [Streptomyces ghanaensis ATCC 14672]
 gi|291339887|gb|EFE66843.1| ribosome recycling factor [Streptomyces ghanaensis ATCC 14672]
          Length = 185

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA A  E +K
Sbjct: 66  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREFIKVAKAKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R +RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 126 VSIRAVRRKAKDAIDKLIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|257084575|ref|ZP_05578936.1| ribosome recycling factor [Enterococcus faecalis Fly1]
 gi|307287723|ref|ZP_07567766.1| ribosome recycling factor [Enterococcus faecalis TX0109]
 gi|256992605|gb|EEU79907.1| ribosome recycling factor [Enterococcus faecalis Fly1]
 gi|306501461|gb|EFM70764.1| ribosome recycling factor [Enterococcus faecalis TX0109]
 gi|315164822|gb|EFU08839.1| ribosome recycling factor [Enterococcus faecalis TX1302]
          Length = 185

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L++++  +R GR + S+LD ++VE YG+  P+NQ+A++ + E R+L
Sbjct: 6   LATAKEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A +E+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE SK
Sbjct: 66  MITPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RRD MD LKK++K+G  +ED + S E D+QK+TD +IKNID+   EK++E++  
Sbjct: 126 IAVRNVRRDAMDELKKAQKNGDITEDELRSFEKDVQKLTDDSIKNIDAITAEKEQELLEV 185


>gi|225570389|ref|ZP_03779414.1| hypothetical protein CLOHYLEM_06489 [Clostridium hylemonae DSM
           15053]
 gi|225160760|gb|EEG73379.1| hypothetical protein CLOHYLEM_06489 [Clostridium hylemonae DSM
           15053]
          Length = 183

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 114/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   D+M  TI+ L+ ++  +R GR +P++L+ + V  YG+  P+ QVANV+V E RM+
Sbjct: 5   LKVYDDKMNKTIASLEGELAAIRAGRANPNVLNKIMVNYYGTPTPIQQVANVSVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K MV  +E+ I  S+LG+NP  +G  +R+  PE TEERR  L K      E +K
Sbjct: 65  HIQPWEKSMVKEIEKAIMTSDLGINPTNDGSAIRLAFPELTEERRKELAKDVKKKGENAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRDG D LKK  K  + SED +  LE+++QK+TD  IK +D   E K KE+M  
Sbjct: 125 VAIRNIRRDGNDTLKKL-KGSEVSEDEIKDLEDELQKLTDKFIKEVDKAVEAKSKEVMTV 183


>gi|114562451|ref|YP_749964.1| ribosome recycling factor [Shewanella frigidimarina NCIMB 400]
 gi|122300314|sp|Q085D9|RRF_SHEFN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|114333744|gb|ABI71126.1| ribosome recycling factor [Shewanella frigidimarina NCIMB 400]
          Length = 185

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 82/180 (45%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + ++RM   +   K  M  +RTGR  PS+LD ++V  YGS  PL QVANV V + R L
Sbjct: 6   MLDAQERMSKCVDATKNQMAKVRTGRAHPSLLDSIQVSCYGSMSPLKQVANVGVEDSRTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+V+D+ MV +VE+ I  S+LGLNP+  G  LRIP+P  TEERR   +KV    AE  +
Sbjct: 66  TVNVFDRSMVQAVEKAIMSSDLGLNPMSAGATLRIPLPSLTEERRKDFIKVVRNEAENGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RRD +  +KK  K+   +ED V   E+++QK TDS+IKNID     K+KE+M  
Sbjct: 126 IAIRNVRRDAISEVKKLEKAKACTEDDVRRSEDEVQKHTDSSIKNIDQILAAKEKELMEV 185


>gi|163815219|ref|ZP_02206596.1| hypothetical protein COPEUT_01379 [Coprococcus eutactus ATCC 27759]
 gi|158449414|gb|EDP26409.1| hypothetical protein COPEUT_01379 [Coprococcus eutactus ATCC 27759]
          Length = 184

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  ++  L+ +  T+R GR +P++L+ ++VE YG   P+ Q+AN+TV E R L
Sbjct: 5   LSQYEEKMQKSLDNLEAEYATIRAGRANPNILNKLRVEYYGVPTPMQQLANITVPEARTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+  +V  +E+ I  S++G+ P  +G+ + +  PE TE+RR  LVK      E +K
Sbjct: 65  MIAPWEPSLVKEIEKAIMNSDIGITPNNDGRNIILNFPELTEDRRKELVKDIKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D +KK  KSG  SED +A  E+ IQK+TD  +  ID   E K KEIM  
Sbjct: 125 VAIRNIRRDANDAIKKMEKSGDISEDELADNEDKIQKLTDKYVGQIDKAVEAKSKEIMTV 184


>gi|296139389|ref|YP_003646632.1| ribosome recycling factor [Tsukamurella paurometabola DSM 20162]
 gi|296027523|gb|ADG78293.1| ribosome recycling factor [Tsukamurella paurometabola DSM 20162]
          Length = 185

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  ++D  ++RTGR +PSM   V V+ YGS  P+ Q++++T  E R++
Sbjct: 6   LFDAEEKMEKAVSVAREDFQSIRTGRANPSMFAKVMVDYYGSPTPITQISSITTPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +GQ++R+ +P+ TEERR  LVK   +  E +K
Sbjct: 66  VIKPYEANQLGNIETAIRNSDLGVNPTNDGQLIRVGIPQLTEERRKELVKQVKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN+RR   + + K  K G A ED  +  E D+ K T      ID   + K+ ++M  
Sbjct: 126 VSIRNVRRKANEQIAKFVKDGDAGEDEGSRAEKDLDKTTAKYTAQIDDLVKHKEADLMEV 185


>gi|171059528|ref|YP_001791877.1| ribosome recycling factor [Leptothrix cholodnii SP-6]
 gi|238689083|sp|B1XXJ2|RRF_LEPCP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|170776973|gb|ACB35112.1| ribosome recycling factor [Leptothrix cholodnii SP-6]
          Length = 186

 Score =  233 bits (596), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  ++   K ++  +RTGR  P +LD V V+ YGS++PL+QVANVT+++ R + 
Sbjct: 8   KNAEAKMAKSVEAFKNELQKIRTGRAHPGILDQVHVDYYGSNLPLSQVANVTLIDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M   +E+ I ES+LGLNP   G ++R+P+P  TEERR  L KV     E SK+
Sbjct: 68  VQPWEKSMAQKIEKAIRESDLGLNPSSMGDLIRVPMPALTEERRKELTKVVRHAGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  D  KK  K    SED      +++QK+TD  I  ID     K+ EI+  
Sbjct: 128 AVRNLRRDANDQAKKLLKDKLISEDDERRSVDEVQKLTDRVIAEIDRLVHGKEAEILAV 186


>gi|319946529|ref|ZP_08020764.1| ribosome recycling factor [Streptococcus australis ATCC 700641]
 gi|319747275|gb|EFV99533.1| ribosome recycling factor [Streptococcus australis ATCC 700641]
          Length = 185

 Score =  233 bits (596), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + V+ YG   PLNQ+A++T+ E R++
Sbjct: 6   VEKAKERMSQSHQSLGREFGSIRAGRANASLLDRIYVQYYGVDTPLNQIASITIPEARVM 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E  ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LITPFDKSSLKDIEHALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED +  LE +IQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKGLEKEIQKVTDDAVKHIDEMTAHKEKELLEV 185


>gi|257126427|ref|YP_003164541.1| ribosome recycling factor [Leptotrichia buccalis C-1013-b]
 gi|257050366|gb|ACV39550.1| ribosome recycling factor [Leptotrichia buccalis C-1013-b]
          Length = 185

 Score =  233 bits (596), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+ ++++M  ++   K     +R GR S SMLD V VEAYGS  PLNQV  V+  E R+L
Sbjct: 6   LKEVEEKMQKSVENTKTKFSHVRAGRASVSMLDGVTVEAYGSPTPLNQVGTVSAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++ ++E+ I ++NLG NP  +G+++R+ VPE TE+RR   VK+    AE+ K
Sbjct: 66  VIDPWDKSLIPAIEKTILQANLGFNPSNDGKIIRLVVPELTEDRRKEYVKMVKKEAEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+R++  + L+K  K+ + +ED + S E  +QK TD  I  +D    +K+KE++  
Sbjct: 126 VAIRNVRKEVNNKLRKLEKNSEITEDELKSSEEKVQKSTDKFIAQVDEALNKKEKELLTV 185


>gi|332982468|ref|YP_004463909.1| ribosome recycling factor [Mahella australiensis 50-1 BON]
 gi|332700146|gb|AEE97087.1| ribosome recycling factor [Mahella australiensis 50-1 BON]
          Length = 186

 Score =  233 bits (596), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 82/175 (46%), Positives = 125/175 (71%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            + +M   I  LKK++ TLRTGR +P +LD + V+ YG+  P+ Q+ N+T  EPR+LV++
Sbjct: 10  TEQKMNKVIDVLKKELSTLRTGRANPQILDNITVDYYGASTPITQLGNITSPEPRLLVIA 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WD +++  +E+ I +S+LG+NP  +G+V+R+ +PE TEERR  LVK+A    E++K++V
Sbjct: 70  PWDPKIIKDMEKAIQKSDLGINPSNDGKVIRLVIPELTEERRKELVKLARKMGEEAKVAV 129

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRR+ +DHLKK +K G  SED     ++DIQK+TD+ I  IDS  E+K+K+IM
Sbjct: 130 RNIRREAIDHLKKQKKDGDISEDEEKRQQDDIQKLTDNKINEIDSIIEQKEKDIM 184


>gi|152991633|ref|YP_001357354.1| ribosome recycling factor [Sulfurovum sp. NBC37-1]
 gi|226703269|sp|A6Q688|RRF_SULNB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151423494|dbj|BAF70997.1| ribosome recycling factor Frr [Sulfurovum sp. NBC37-1]
          Length = 185

 Score =  233 bits (596), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 65/185 (35%), Positives = 117/185 (63%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N++   ++ K+ M  ++  LK+D  +LRTG+V+ +++D +KV+ YG+  PLNQV +V   
Sbjct: 3   NEIF--EHTKENMDKSLEALKRDFASLRTGKVTTNIVDNIKVDYYGTPTPLNQVGSVIAT 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           +   + ++ W+K +++ +ER I E+N+G+NP  +G  +++  P  T E+R  +VK A A 
Sbjct: 61  DATTISITPWEKNLLSDIERAIQEANIGVNPNNDGDFIKLFFPPMTSEQRQEIVKQAKAM 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE +++++RNIR+D  + +KK  K  + SED      ++IQKITD  I  +D  F+ K+ 
Sbjct: 121 AENARVAIRNIRKDANNKIKKLEKDKEISEDESKRAHDEIQKITDDHIGMVDELFKAKEA 180

Query: 182 EIMHF 186
           +I+  
Sbjct: 181 DILKV 185


>gi|269955983|ref|YP_003325772.1| ribosome recycling factor [Xylanimonas cellulosilytica DSM 15894]
 gi|269304664|gb|ACZ30214.1| ribosome recycling factor [Xylanimonas cellulosilytica DSM 15894]
          Length = 185

 Score =  233 bits (596), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K+D   +RTGR +  M   + V+ YG+  PL Q+A+  + E R +
Sbjct: 6   LFEAEEKMDKAIEVAKEDFAGIRTGRANAGMFSKIVVDYYGAPTPLQQLASFNIPEARSV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A++E+ + +S+LG+NP  +G  +RI +P  TEERR   VK+A   AE ++
Sbjct: 66  LISPFDKSSMAAIEKALRDSDLGVNPSNDGNAIRIVLPALTEERRRDYVKLAKTKAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRR   D L K  K G+A ED V+  E +++ +T   +  +D     K+ E++  
Sbjct: 126 ITVRNIRRKAKDVLDKLVKDGEAGEDEVSRAEKELEALTKRHVDQVDQLLAGKESELLEV 185


>gi|118472629|ref|YP_886878.1| ribosome recycling factor [Mycobacterium smegmatis str. MC2 155]
 gi|166230801|sp|A0QVE0|RRF_MYCS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118173916|gb|ABK74812.1| ribosome recycling factor [Mycobacterium smegmatis str. MC2 155]
          Length = 185

 Score =  233 bits (596), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  + ++ ++RTGR +P M + + ++ YGS  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVSVARDELGSIRTGRANPGMFNRINIDYYGSMTPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ +P+ TEERR  LVK A +  E +K
Sbjct: 66  VIKPYEASQLRAIEDAIRNSDLGVNPSNDGNIIRVAIPQLTEERRRELVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + +K G+A ED V+  E D+ K T +    ID   + K+ E++  
Sbjct: 126 VSVRNIRRKAMEELSRIKKDGEAGEDEVSRAEKDLDKSTHTYTAQIDELVKHKESELLEV 185


>gi|225021116|ref|ZP_03710308.1| hypothetical protein CORMATOL_01128 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946116|gb|EEG27325.1| hypothetical protein CORMATOL_01128 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 205

 Score =  233 bits (595), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ M  T+   ++++ T+RTGR +P+M + V  + YG   P+ Q+A V+V E RM+
Sbjct: 26  LLECEEHMSTTVDRTREELTTIRTGRANPAMFNGVVADYYGVPTPITQMATVSVPEARMM 85

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++  M+  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A +  E  K
Sbjct: 86  LIKPYEMSMMGVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMVKLAKSKGEDGK 145

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RR GMD LKK  K G A ED V + E ++ K+T   +  +D   ++K+ E+M  
Sbjct: 146 IAIRNVRRKGMDQLKKIHKDGDAGEDEVQAAEKELDKVTQKYVAAVDEVVQKKEAELMEV 205


>gi|84686917|ref|ZP_01014801.1| ribosome recycling factor [Maritimibacter alkaliphilus HTCC2654]
 gi|84665114|gb|EAQ11594.1| ribosome recycling factor [Rhodobacterales bacterium HTCC2654]
          Length = 188

 Score =  233 bits (595), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 83/182 (45%), Positives = 124/182 (68%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID+ +++ RM   I  L+ ++ +LRTGR S +ML+ V VEAYG   P+NQV  V V EPR
Sbjct: 8   IDIDDLERRMEGAIGALRTELASLRTGRASAAMLEPVHVEAYGQRTPINQVGTVNVPEPR 67

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V +VE+ I ES LG+NP   G ++ +P+PE  EERR  L +VA  YAE 
Sbjct: 68  MVTINVWDKSLVNAVEKAIMESGLGINPQTNGTIIMLPIPELNEERRKELARVAAQYAES 127

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGM+ LKK++ +G  SED      +++Q++TD  I N+D   E K++EIM
Sbjct: 128 ARVAIRNVRRDGMEQLKKAKAAG-MSEDDNKIWHDEVQELTDKYIGNVDKTLETKQEEIM 186

Query: 185 HF 186
             
Sbjct: 187 QV 188


>gi|319786511|ref|YP_004145986.1| ribosome recycling factor [Pseudoxanthomonas suwonensis 11-1]
 gi|317465023|gb|ADV26755.1| ribosome recycling factor [Pseudoxanthomonas suwonensis 11-1]
          Length = 185

 Score =  233 bits (595), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+ +++ +RTGR S  ++D ++V AYGS VPL+QVA V+V + R LV
Sbjct: 7   QDAQARMAKSIEALRHNLVKVRTGRASTGLVDTIRVSAYGSDVPLSQVAAVSVSDARSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WDK MV  +E+ I  S+LGL P   G  +R+ +P  TEERR  L KV  +  E +K+
Sbjct: 67  ITPWDKSMVGPIEKAILASDLGLTPNTAGTTIRLNLPALTEERRRDLAKVVASEGEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD    +K   K  + +ED V   E+DIQKITD  IK++D   + K++E+M  
Sbjct: 127 AIRNVRRDANQQVKDLLKEKQVTEDDVRRAEDDIQKITDKAIKDVDEVVKAKEQELMAV 185


>gi|308233714|ref|ZP_07664451.1| ribosome recycling factor [Atopobium vaginae DSM 15829]
 gi|328944064|ref|ZP_08241529.1| ribosome recycling factor [Atopobium vaginae DSM 15829]
 gi|327492033|gb|EGF23807.1| ribosome recycling factor [Atopobium vaginae DSM 15829]
          Length = 181

 Score =  233 bits (595), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              +  M   I  LK +   +RTGR +P +LD ++V+ YG   P+ Q+A + V EP MLV
Sbjct: 6   DQAQKHMNKCIDALKNNFSKVRTGRANPQVLDGIRVDYYGQPTPIVQLAGIKVPEPSMLV 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WDK  + ++E+ I  S+LG+ P  +G  +R+P P+ TEERR  LVK    YAE +K+
Sbjct: 66  VEPWDKSSLKAIEKAIESSDLGITPSNDGTSIRLPFPKPTEERRRELVKECKQYAEDAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN RRD  +   K+ +  + +ED V   +  IQK+TD  +  ID   + K +E+M  
Sbjct: 126 AVRNARRDANN---KAERDEELNEDDVNREKKAIQKLTDEFVAKIDEMLKTKSQEVMEI 181


>gi|325281134|ref|YP_004253676.1| Ribosome-recycling factor [Odoribacter splanchnicus DSM 20712]
 gi|324312943|gb|ADY33496.1| Ribosome-recycling factor [Odoribacter splanchnicus DSM 20712]
          Length = 187

 Score =  233 bits (595), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 76/188 (40%), Positives = 114/188 (60%), Gaps = 3/188 (1%)

Query: 1   MNQVIDL--QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ + +     K++M + +  L+ ++  +R G+ +P +L+ V V+ YGS  PL+QVAN+
Sbjct: 1   MNEEVKMYMDEAKEQMQNALVHLENELAKIRAGKANPKILNDVLVDYYGSPTPLSQVANI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           T  +PR + V  W+K M+  +++ I  +NLG NP   G+V+RI VP  T ERR  LVK +
Sbjct: 61  TAPDPRTIAVQPWEKNMLGPIQKAIMNANLGFNPDNNGEVVRINVPPLTAERRKELVKQS 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E +K+S+RN RRD +D  KK  KSG   ED     E+++QKITDS  K ID     
Sbjct: 121 KGVGETAKVSIRNARRDAIDEFKKMVKSG-LPEDEAKDAEDEVQKITDSYNKKIDEILTA 179

Query: 179 KKKEIMHF 186
           K+K+IM  
Sbjct: 180 KEKDIMTI 187


>gi|134094563|ref|YP_001099638.1| ribosome recycling factor [Herminiimonas arsenicoxydans]
 gi|166230793|sp|A4G4S4|RRF_HERAR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|133738466|emb|CAL61511.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Herminiimonas arsenicoxydans]
          Length = 186

 Score =  233 bits (595), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +    +M  +I  LK D+  +RTGR    +LD V VE YG+   L QVANVT+++ R + 
Sbjct: 8   KTADQKMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLTQVANVTLIDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K+MVA VE+ I +++LGLNP  +G+++R+P P  TEERR  +VK+  + AE +KI
Sbjct: 68  VQPFEKKMVAVVEKAIRDADLGLNPATQGEMIRVPTPPLTEERRKEMVKLVKSEAEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  + LKK  K    SED     +++IQK+TD  +  +D    EK+KE++  
Sbjct: 128 AIRNIRRDANETLKKLLKDKACSEDDERRAQDEIQKLTDKFVLEVDKLVVEKEKEVLTV 186


>gi|311898628|dbj|BAJ31036.1| putative ribosome recycling factor [Kitasatospora setae KM-6054]
          Length = 185

 Score =  233 bits (595), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 103/180 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K D+  +RTGR  P+M   +  E YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVGVAKDDLAAIRTGRAHPAMFAKIVAEYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  + ++E  I +S+LG+NP  +G V+R+ +P+ TEERR   +K A    E +K
Sbjct: 66  MVTPFDKTALKAIETAIRDSDLGVNPSNDGSVIRVVLPQLTEERRREYIKQARGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVR+IRR   D + K  K  +  ED     E ++  +T   +  ID   + K+ E++  
Sbjct: 126 VSVRSIRRKAKDAIDKLVKDKEIGEDDGRRGEKELDDLTAKFVAQIDELLKHKEAELLEV 185


>gi|84516072|ref|ZP_01003432.1| ribosome recycling factor [Loktanella vestfoldensis SKA53]
 gi|84509768|gb|EAQ06225.1| ribosome recycling factor [Loktanella vestfoldensis SKA53]
          Length = 187

 Score =  233 bits (595), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 84/182 (46%), Positives = 122/182 (67%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++  RM   I+ L+ ++ +LRTGR S SML+ + V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLARRMDGAIANLRVELASLRTGRASGSMLEPIMVDAYGSPTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I +S LG+NP + G ++ +P+PE  EERR  L KVA  YAE+
Sbjct: 67  MVTINVWDKALVGKVEKAIRDSGLGINPQLNGTIIMLPIPELNEERRRELTKVAGNYAEQ 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN+RRDGMD +KK++  G  SED     E  +Q+ITD+  K +D   E K+ EIM
Sbjct: 127 ARVSIRNLRRDGMDQIKKAKSDG-LSEDDQKFWETTVQEITDAHTKLVDETLETKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|254519196|ref|ZP_05131252.1| ribosome recycling factor [Clostridium sp. 7_2_43FAA]
 gi|226912945|gb|EEH98146.1| ribosome recycling factor [Clostridium sp. 7_2_43FAA]
          Length = 185

 Score =  233 bits (595), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 80/180 (44%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M  TIS LK D+ T+R GR +P+MLD ++V+ YGS  PLNQVAN++  EPR+L
Sbjct: 6   IQKAEEKMKKTISVLKSDLSTMRAGRANPTMLDRIQVDYYGSPCPLNQVANISAPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S W+K ++  +E+ I  S+LG+NP  +G V+R+ VPE TEE R  LVK      E++K
Sbjct: 66  VISPWEKSLMKEIEKAILTSDLGINPSNDGSVIRLVVPELTEETRRNLVKNVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRR+  D +K  +K G+ +ED + + E  +QKI DS +K +D+    K+KEIM  
Sbjct: 126 VALRSIRREANDKIKALKKDGEITEDELKNSEEKVQKIIDSFVKEVDTIIVAKEKEIMSI 185


>gi|289578399|ref|YP_003477026.1| ribosome recycling factor [Thermoanaerobacter italicus Ab9]
 gi|297544675|ref|YP_003676977.1| ribosome recycling factor [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|289528112|gb|ADD02464.1| ribosome recycling factor [Thermoanaerobacter italicus Ab9]
 gi|296842450|gb|ADH60966.1| ribosome recycling factor [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 184

 Score =  233 bits (595), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 80/180 (44%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M  ++S LK ++  +R GR +P++LD + V+ YG+  PLN++A +T  E R+L
Sbjct: 5   LKASEEKMQKSLSVLKSELAAIRAGRANPALLDRIMVDYYGTPTPLNRLATITAPEARVL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WD   ++ +E+ I +S+LG+NP+ +G+VLR+  PE TEERR  LVK+ +  AE++K
Sbjct: 65  VVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVYKKAEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRRD  D +KK  K+G+ SED     E +IQK+TD  IK ID   E K+KEIM  
Sbjct: 125 VAVRQIRRDANDTVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKIAETKEKEIMEI 184


>gi|15924249|ref|NP_371783.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926842|ref|NP_374375.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           N315]
 gi|21282871|ref|NP_645959.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus MW2]
 gi|49483422|ref|YP_040646.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49486098|ref|YP_043319.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651829|ref|YP_186135.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus COL]
 gi|82750860|ref|YP_416601.1| ribosome recycling factor [Staphylococcus aureus RF122]
 gi|87160153|ref|YP_493849.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194969|ref|YP_499769.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148267749|ref|YP_001246692.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus JH9]
 gi|150393808|ref|YP_001316483.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus JH1]
 gi|151221381|ref|YP_001332203.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979580|ref|YP_001441839.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus Mu3]
 gi|221142493|ref|ZP_03566986.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253315615|ref|ZP_04838828.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253731878|ref|ZP_04866043.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733503|ref|ZP_04867668.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006046|ref|ZP_05144647.2| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257425313|ref|ZP_05601738.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427974|ref|ZP_05604372.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430607|ref|ZP_05606989.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433367|ref|ZP_05609725.1| ribosome-recycling factor [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436209|ref|ZP_05612256.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M876]
 gi|257795685|ref|ZP_05644664.1| ribosome recycling factor [Staphylococcus aureus A9781]
 gi|258416088|ref|ZP_05682356.1| ribosome recycling factor [Staphylococcus aureus A9763]
 gi|258421671|ref|ZP_05684595.1| ribosome recycling factor [Staphylococcus aureus A9719]
 gi|258434827|ref|ZP_05688901.1| ribosome recycling factor [Staphylococcus aureus A9299]
 gi|258444597|ref|ZP_05692926.1| ribosome-recycling factor [Staphylococcus aureus A8115]
 gi|258447570|ref|ZP_05695714.1| ribosome recycling factor [Staphylococcus aureus A6300]
 gi|258449412|ref|ZP_05697515.1| ribosome-recycling factor [Staphylococcus aureus A6224]
 gi|258452558|ref|ZP_05700564.1| ribosome recycling factor [Staphylococcus aureus A5948]
 gi|258454791|ref|ZP_05702755.1| ribosome recycling factor [Staphylococcus aureus A5937]
 gi|262051321|ref|ZP_06023544.1| ribosome recycling factor [Staphylococcus aureus 930918-3]
 gi|269202876|ref|YP_003282145.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892747|ref|ZP_06300982.1| ribosome recycling factor [Staphylococcus aureus A8117]
 gi|282903814|ref|ZP_06311702.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C160]
 gi|282905577|ref|ZP_06313432.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908552|ref|ZP_06316382.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910831|ref|ZP_06318634.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282914036|ref|ZP_06321823.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M899]
 gi|282916519|ref|ZP_06324277.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           D139]
 gi|282918958|ref|ZP_06326693.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C427]
 gi|282920503|ref|ZP_06328224.1| ribosome recycling factor [Staphylococcus aureus A9765]
 gi|282924081|ref|ZP_06331757.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C101]
 gi|282927601|ref|ZP_06335217.1| ribosome recycling factor [Staphylococcus aureus A10102]
 gi|283770323|ref|ZP_06343215.1| ribosome-recycling factor [Staphylococcus aureus subsp. aureus H19]
 gi|283958002|ref|ZP_06375453.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|284024252|ref|ZP_06378650.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus 132]
 gi|293501068|ref|ZP_06666919.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510030|ref|ZP_06668738.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526616|ref|ZP_06671301.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M1015]
 gi|294848255|ref|ZP_06789002.1| ribosome recycling factor [Staphylococcus aureus A9754]
 gi|295406196|ref|ZP_06816003.1| ribosome recycling factor [Staphylococcus aureus A8819]
 gi|295427746|ref|ZP_06820378.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296274817|ref|ZP_06857324.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus MR1]
 gi|297208095|ref|ZP_06924526.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297244424|ref|ZP_06928307.1| ribosome recycling factor [Staphylococcus aureus A8796]
 gi|297591296|ref|ZP_06949934.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus MN8]
 gi|300912176|ref|ZP_07129619.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304381177|ref|ZP_07363830.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|56749387|sp|Q6G9V4|RRF_STAAS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56749416|sp|Q6GHH6|RRF_STAAR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56753990|sp|P68785|RRF_STAAM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56753991|sp|P68786|RRF_STAAU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56753994|sp|P68787|RRF_STAAW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56753995|sp|P99130|RRF_STAAN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|62900781|sp|Q5HGH2|RRF_STAAC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122539692|sp|Q2FZ21|RRF_STAA8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123486185|sp|Q2FHH9|RRF_STAA3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123549062|sp|Q2YXK9|RRF_STAAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231513|sp|A7X1N7|RRF_STAA1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|172049020|sp|A6QGF9|RRF_STAAE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044079|sp|A6U178|RRF_STAA2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044080|sp|A5ISE3|RRF_STAA9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|2645713|gb|AAB87473.1| ribosome recycling factor [Staphylococcus aureus]
 gi|13701059|dbj|BAB42354.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247029|dbj|BAB57421.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21204310|dbj|BAB95007.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus MW2]
 gi|49241551|emb|CAG40237.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49244541|emb|CAG42970.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286015|gb|AAW38109.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus COL]
 gi|82656391|emb|CAI80810.1| ribosome recycling factor [Staphylococcus aureus RF122]
 gi|87126127|gb|ABD20641.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202527|gb|ABD30337.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147740818|gb|ABQ49116.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus JH9]
 gi|149946260|gb|ABR52196.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus JH1]
 gi|150374181|dbj|BAF67441.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156721715|dbj|BAF78132.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus Mu3]
 gi|253724288|gb|EES93017.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728557|gb|EES97286.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257271770|gb|EEV03908.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274815|gb|EEV06302.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278735|gb|EEV09354.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281460|gb|EEV11597.1| ribosome-recycling factor [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284491|gb|EEV14611.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M876]
 gi|257789657|gb|EEV27997.1| ribosome recycling factor [Staphylococcus aureus A9781]
 gi|257839236|gb|EEV63712.1| ribosome recycling factor [Staphylococcus aureus A9763]
 gi|257842357|gb|EEV66782.1| ribosome recycling factor [Staphylococcus aureus A9719]
 gi|257849188|gb|EEV73170.1| ribosome recycling factor [Staphylococcus aureus A9299]
 gi|257850090|gb|EEV74043.1| ribosome-recycling factor [Staphylococcus aureus A8115]
 gi|257853761|gb|EEV76720.1| ribosome recycling factor [Staphylococcus aureus A6300]
 gi|257857400|gb|EEV80298.1| ribosome-recycling factor [Staphylococcus aureus A6224]
 gi|257859776|gb|EEV82618.1| ribosome recycling factor [Staphylococcus aureus A5948]
 gi|257863174|gb|EEV85938.1| ribosome recycling factor [Staphylococcus aureus A5937]
 gi|259160696|gb|EEW45717.1| ribosome recycling factor [Staphylococcus aureus 930918-3]
 gi|262075166|gb|ACY11139.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269940750|emb|CBI49132.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282314053|gb|EFB44445.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316768|gb|EFB47142.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C427]
 gi|282319006|gb|EFB49358.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           D139]
 gi|282322104|gb|EFB52428.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M899]
 gi|282325436|gb|EFB55745.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327614|gb|EFB57897.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330869|gb|EFB60383.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282590604|gb|EFB95681.1| ribosome recycling factor [Staphylococcus aureus A10102]
 gi|282594165|gb|EFB99152.1| ribosome recycling factor [Staphylococcus aureus A9765]
 gi|282595432|gb|EFC00396.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           C160]
 gi|282764744|gb|EFC04869.1| ribosome recycling factor [Staphylococcus aureus A8117]
 gi|283460470|gb|EFC07560.1| ribosome-recycling factor [Staphylococcus aureus subsp. aureus H19]
 gi|283470474|emb|CAQ49685.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           ST398]
 gi|283790151|gb|EFC28968.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|285816941|gb|ADC37428.1| Ribosome recycling factor [Staphylococcus aureus 04-02981]
 gi|290920688|gb|EFD97751.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291096073|gb|EFE26334.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466974|gb|EFF09492.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           M809]
 gi|294825055|gb|EFG41477.1| ribosome recycling factor [Staphylococcus aureus A9754]
 gi|294968784|gb|EFG44806.1| ribosome recycling factor [Staphylococcus aureus A8819]
 gi|295128104|gb|EFG57738.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296887338|gb|EFH26240.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178454|gb|EFH37700.1| ribosome recycling factor [Staphylococcus aureus A8796]
 gi|297576182|gb|EFH94898.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus MN8]
 gi|298694551|gb|ADI97773.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300886422|gb|EFK81624.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302332865|gb|ADL23058.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|302751082|gb|ADL65259.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340160|gb|EFM06101.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312438362|gb|ADQ77433.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315131053|gb|EFT87037.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315194147|gb|EFU24540.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           CGS00]
 gi|315198501|gb|EFU28830.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140924|gb|EFW32771.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320144360|gb|EFW36126.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323441038|gb|EGA98745.1| ribosome recycling factor [Staphylococcus aureus O11]
 gi|323443907|gb|EGB01518.1| ribosome recycling factor [Staphylococcus aureus O46]
 gi|329313929|gb|AEB88342.1| Ribosome-recycling factor [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329727824|gb|EGG64275.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           21189]
 gi|329733642|gb|EGG69970.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           21193]
          Length = 184

 Score =  233 bits (595), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I+    K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDIIN--ETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR   VK    
Sbjct: 59  PEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++K+SVRNIRRD  D LKK  K+G  +ED + S   D+QK TD++IK ID    +K+
Sbjct: 119 IGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|227504802|ref|ZP_03934851.1| ribosome recycling factor [Corynebacterium striatum ATCC 6940]
 gi|227198652|gb|EEI78700.1| ribosome recycling factor [Corynebacterium striatum ATCC 6940]
          Length = 185

 Score =  233 bits (595), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 114/186 (61%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I L   ++ M  ++   ++ ++T+RTGR +P+M + +  E YG+  P+ Q+A ++V
Sbjct: 1   MIDEIQL-EAEEHMTASVEHTREQLITIRTGRANPAMFNGLVAEYYGAPTPITQMATISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+++  +++ M+  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  LVK A  
Sbjct: 60  PEPRMMLIKPYEQSMIHEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDLVKQAKG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  KI++RNIRR  MD LKK +K G A ED V + E +++K T   I  +D     K+
Sbjct: 120 KGEDGKIAIRNIRRKAMDQLKKLQKDGDAGEDEVVAAEKEMEKTTAGYIDQVDKLVANKE 179

Query: 181 KEIMHF 186
            E+M  
Sbjct: 180 NELMEV 185


>gi|197303245|ref|ZP_03168286.1| hypothetical protein RUMLAC_01968 [Ruminococcus lactaris ATCC
           29176]
 gi|197297671|gb|EDY32230.1| hypothetical protein RUMLAC_01968 [Ruminococcus lactaris ATCC
           29176]
          Length = 183

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 78/186 (41%), Positives = 116/186 (62%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+ I   ++  +M  TI+ L  ++ T+R GR +P +LD + V+ YGS  P+ QVANV+V
Sbjct: 1   MNEKIAAYDV--KMTKTINNLDGELATIRAGRANPHVLDKIAVDYYGSPTPIQQVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+K M+ ++E+ I  S++G+NP  +G  +R+  PE TE+RR  L K    
Sbjct: 59  PEARMIQIQPWEKSMLKAIEKAILTSDIGINPTNDGTSIRLVFPELTEDRRKELAKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++K++VRNIRRDG    KK  K  + SED +  LE+++QKITD  I  +D   E K 
Sbjct: 119 KGEEAKVAVRNIRRDGNVAFKKL-KGTEISEDEIKDLEDELQKITDKYIAQVDKMVEAKS 177

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 178 KEIMTV 183


>gi|29829166|ref|NP_823800.1| ribosome recycling factor [Streptomyces avermitilis MA-4680]
 gi|34924903|sp|Q82JY0|RRF_STRAW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29606272|dbj|BAC70335.1| putative ribosome recycling factor [Streptomyces avermitilis
           MA-4680]
          Length = 185

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +K
Sbjct: 66  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRKDYIKVAKTKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R++RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 126 VSIRSVRRKAKDAIDKLIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|119505669|ref|ZP_01627739.1| ribosome recycling factor [marine gamma proteobacterium HTCC2080]
 gi|119458481|gb|EAW39586.1| ribosome recycling factor [marine gamma proteobacterium HTCC2080]
          Length = 185

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/178 (39%), Positives = 105/178 (58%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             + RM   +  L      +RTGR  PS+LD ++ E YG+  PLNQ+AN+TV + R L V
Sbjct: 8   ETEQRMVKALDALGHHFNKIRTGRAHPSLLDGIRAEYYGALTPLNQLANITVEDARTLAV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S +DK M  ++E+ I +S+LGLNP   G V+RIP+P  TEE R   +K A A AE  ++S
Sbjct: 68  SAFDKSMTPTIEKAIMKSDLGLNPATAGDVMRIPMPMLTEETRRGFIKQAKAEAEAGRVS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +R+ RRD    LK+  K  + SED     ++ IQK+TD+ +  ++     K+ ++M  
Sbjct: 128 IRSARRDANGMLKELLKDKEISEDDERRAQDVIQKLTDNFVAKVEEALAAKETDLMEI 185


>gi|315144762|gb|EFT88778.1| ribosome recycling factor [Enterococcus faecalis TX2141]
          Length = 185

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L++++  +R GR + S+LD ++V+ YG+  P+NQ+A++ + E R+L
Sbjct: 6   LATAKEKMTKAEESLRRELGQIRAGRANASLLDRIQVKYYGAPTPVNQLASINIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A +E+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE SK
Sbjct: 66  MITPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD MD LKK++K+G  +ED + S E D+QK+TD +IKNID+   EK++E++  
Sbjct: 126 VAVRNVRRDAMDELKKAQKNGDITEDELRSFEKDVQKLTDDSIKNIDAITAEKEQELLEV 185


>gi|238924132|ref|YP_002937648.1| ribosome recycling factor [Eubacterium rectale ATCC 33656]
 gi|259494542|sp|C4ZA73|RRF_EUBR3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238875807|gb|ACR75514.1| ribosome recycling factor [Eubacterium rectale ATCC 33656]
 gi|291524866|emb|CBK90453.1| ribosome recycling factor [Eubacterium rectale DSM 17629]
 gi|291529007|emb|CBK94593.1| ribosome recycling factor [Eubacterium rectale M104/1]
          Length = 184

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M  T++ L+++   +R GR +P +LD ++V+ YG+  P+  VANV+V EPRM+
Sbjct: 5   LNPFQDKMEKTLNNLEEEYAGIRAGRANPHILDKLRVDYYGTPSPIQSVANVSVPEPRMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  MV  +E+ I+ S++G+NP  +G+++R+  PE TEERR  L K      E++K
Sbjct: 65  QIQPWEASMVKEIEKAINCSDIGINPTNDGKLIRLVFPELTEERRKDLAKDIKKKGEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD +D +KK+ K    SED +  LE+D QK+TD  +  +D+  + K KEI+  
Sbjct: 125 VAVRNIRRDAIDSIKKTGKEEGISEDEIKGLEDDAQKLTDKFVAKVDAAVDAKCKEILTV 184


>gi|251810690|ref|ZP_04825163.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876309|ref|ZP_06285176.1| ribosome recycling factor [Staphylococcus epidermidis SK135]
 gi|251805850|gb|EES58507.1| peptide chain release factor RF4 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295334|gb|EFA87861.1| ribosome recycling factor [Staphylococcus epidermidis SK135]
          Length = 184

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 78/186 (41%), Positives = 121/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDII--KDTKSRMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKSSVADIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKEVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD++IK ID    +K+
Sbjct: 119 IGEDAKVSIRNIRRDINDQLKKDEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVADKE 178

Query: 181 KEIMHF 186
           K+I+  
Sbjct: 179 KDIISV 184


>gi|325913951|ref|ZP_08176307.1| ribosome recycling factor [Xanthomonas vesicatoria ATCC 35937]
 gi|325539720|gb|EGD11360.1| ribosome recycling factor [Xanthomonas vesicatoria ATCC 35937]
          Length = 185

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQTRMTKSIDALRHSLTTVRTGRASPALLDGIKVKAYGTDTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ ++ S+LGL P V G V+R+ +P  TEERR  L K  H   E SK+
Sbjct: 67  ISLFDKGMIKDVEKALYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDSKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K  K +ED     E+DIQK+TD  IK++D   + K++E+M  
Sbjct: 127 AIRNIRRDANQQVKDLLKDKKVTEDEARGAEDDIQKLTDKAIKDVDEVVKGKEQELMTV 185


>gi|323484222|ref|ZP_08089591.1| hypothetical protein HMPREF9474_01342 [Clostridium symbiosum
           WAL-14163]
 gi|323692104|ref|ZP_08106351.1| ribosome recycling factor [Clostridium symbiosum WAL-14673]
 gi|323402464|gb|EGA94793.1| hypothetical protein HMPREF9474_01342 [Clostridium symbiosum
           WAL-14163]
 gi|323503904|gb|EGB19719.1| ribosome recycling factor [Clostridium symbiosum WAL-14673]
          Length = 184

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  +   L  +  ++R GR +P +LD ++V+ YG+  PL QVANV+V EPRM+
Sbjct: 5   IKVYEEKMVKSYEVLLDEYASIRAGRANPHVLDKLRVDYYGTPTPLQQVANVSVPEPRMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+++++  +E+ I  S+LG+NP  +G  +R+  PE TEERR  L K      E  K
Sbjct: 65  LIQPWERKLIKDIEKAILTSDLGINPNNDGNAIRLVFPELTEERRKELAKDVKKKGEGVK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D +KK  K+G+ SED  A  E  IQKITD  I+ ID   E K KEIM  
Sbjct: 125 VAVRNIRRDANDAIKKMEKAGEISEDDQAEGEEKIQKITDKMIEKIDKAVEAKTKEIMTV 184


>gi|228477911|ref|ZP_04062525.1| ribosome recycling factor [Streptococcus salivarius SK126]
 gi|228250401|gb|EEK09641.1| ribosome recycling factor [Streptococcus salivarius SK126]
          Length = 185

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD + VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFAHSHESLAREFGSIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKGSIADIERAINESDLGINPANDGSVVRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K  + +ED + +LE DIQK TD  +K IDS   EK+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKDKEITEDQLKALEKDIQKATDDAVKKIDSMTAEKEKELLTV 185


>gi|85859433|ref|YP_461635.1| ribosome recycling factor [Syntrophus aciditrophicus SB]
 gi|123516615|sp|Q2LTQ4|RRF_SYNAS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|85722524|gb|ABC77467.1| ribosome recycling factor [Syntrophus aciditrophicus SB]
          Length = 185

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
              +K  M   +  L+K    +RTGR S S+LD +K + YG+  PLNQVA ++V E R +
Sbjct: 6   FDELKQNMEKGLQALEKSFNKVRTGRASISLLDGIKADYYGTPTPLNQVATLSVPESRQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S WD   + ++E+ I +S+LGL P  +G+V+RI +P  TE RR  LVKV    AE+ K
Sbjct: 66  LISPWDTSALNAIEKAIQKSDLGLVPNNDGKVIRISIPPLTEARRKELVKVVRKMAEECK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +RN RRD  +  K  +K+   SED +   ++ +QK+TDS I+  +    +K+KEIM  
Sbjct: 126 VKLRNARRDANEEFKSMKKNNDISEDQMHDYQDQVQKMTDSYIEKSEDILVQKEKEIMEI 185


>gi|148241959|ref|YP_001227116.1| ribosome recycling factor [Synechococcus sp. RCC307]
 gi|147850269|emb|CAK27763.1| Ribosome recycling factor [Synechococcus sp. RCC307]
          Length = 179

 Score =  233 bits (595), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 63/178 (35%), Positives = 113/178 (63%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           +++D M  ++   +++  T+RTGR + S+LD V VE YG+  PL  +A ++  + + + +
Sbjct: 2   DLEDSMSKSLEATQRNFNTIRTGRANTSLLDKVMVEYYGADTPLKSLATISAPDSQTIQI 61

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   +A +E+ I  S+LGL P  +G+++RI +P  TEERR  L K+A  YAE+ K++
Sbjct: 62  QPFDMGSMALIEKAIGMSDLGLTPNNDGKLIRINIPPLTEERRKELCKIASKYAEEGKVA 121

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RN+RRD +D +KK  K G+ SED+    ++ +QK+TD  I +++    +K+ +I+  
Sbjct: 122 LRNVRRDAIDQIKKREKDGELSEDLSRDEQDKVQKVTDKFIADLEKLLADKEADILKV 179


>gi|325262932|ref|ZP_08129668.1| ribosome recycling factor [Clostridium sp. D5]
 gi|324032026|gb|EGB93305.1| ribosome recycling factor [Clostridium sp. D5]
          Length = 183

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 113/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M  T+  L  ++ T+R GR +P +LD + V+ YG+  P+ QVANV+V E RM+
Sbjct: 5   LKVYEEKMTKTVENLNSELATIRAGRANPHVLDRLSVDYYGTPTPIQQVANVSVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K ++  +E+ I+ S++G+NP  +G  +R+  PE TEERR  LVK      E +K
Sbjct: 65  QIQPWEKSLLKEIEKAINMSDIGINPTNDGNTIRLVFPELTEERRKELVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRDG +  KK  K G+ SED +  LE  +QK+TD  I  +D   E K KE++  
Sbjct: 125 VAVRNIRRDGNEAFKKL-KGGEISEDGIKDLEESLQKMTDKFIAKVDGCVETKSKEVLTV 183


>gi|224034227|gb|ACN36189.1| unknown [Zea mays]
          Length = 264

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              K++M   I  ++ +  T+RTGR +P+MLD ++VE YG+ V L  +A ++  +   L+
Sbjct: 86  DQAKEKMEKAIETVQANFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLL 145

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK  +  +E+ I  +NLG+ P  +G+V+R+ VP  T +RR  L K     AE  K+
Sbjct: 146 IQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELSKTVAKLAEDGKV 205

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +    K  K  K SED V  L  D+QK+TD  +K I+S  ++K++E+M  
Sbjct: 206 AIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIESIQKQKEQELMKI 264


>gi|329727208|gb|EGG63664.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           21172]
          Length = 184

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I+    K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDIIN--ETKSRMQKSIESLSRELANVSAGRANSNLLNGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR   VK    
Sbjct: 59  PEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++K+SVRNIRRD  D LKK  K+G  +ED + S   D+QK TD++IK ID    +K+
Sbjct: 119 IGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|282897920|ref|ZP_06305915.1| Ribosome recycling factor [Raphidiopsis brookii D9]
 gi|281197064|gb|EFA71965.1| Ribosome recycling factor [Raphidiopsis brookii D9]
          Length = 182

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 64/177 (36%), Positives = 107/177 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +  M  T+   ++   ++RTGR + S+LD V+V+ YGS  PL  ++N+T  +   +
Sbjct: 3   LAEAESTMNKTVEATQRAFNSIRTGRANASLLDKVQVDYYGSPTPLKSLSNITTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  +  VE+ I  S++GL P  +G V+R+ +P  T +RR  LVK+A  YAE+ +
Sbjct: 63  LIQPYDRSSLNIVEKAISLSDVGLTPSNDGSVVRLNIPPLTSDRRKELVKLAAKYAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           + +RNIRRD +D ++K  K+G+ SED     ++ +QKIT      ID    EK+K+I
Sbjct: 123 VGIRNIRRDALDSIRKQEKAGEISEDESRDQQDKLQKITGKYTAKIDELLAEKEKDI 179


>gi|145589629|ref|YP_001156226.1| ribosome recycling factor [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189044064|sp|A4SYU8|RRF_POLSQ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145048035|gb|ABP34662.1| ribosome recycling factor [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 186

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/178 (41%), Positives = 115/178 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N   +M  ++  LK  +  +R+GR +P +L+ + V+ YG+  PL+QVA++ + + R + V
Sbjct: 9   NTDQKMQKSLESLKSSLAKIRSGRANPGILEHIHVDYYGNPTPLSQVASLGLADARTINV 68

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             ++K MVA+VE+ I +S+LGLNP  +G V+R+P+P  TEERR  L KV  +  E +KI+
Sbjct: 69  QPFEKTMVAAVEKAIRDSDLGLNPASQGTVIRVPMPALTEERRRELTKVVKSEGEDTKIA 128

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRN+RRD  +HLK+  K  + SED      ++IQK+TD  + +ID    EK+KEIM  
Sbjct: 129 VRNLRRDANEHLKRLTKDKEISEDEERRATDEIQKMTDKAVVDIDKIIVEKEKEIMTV 186


>gi|256379903|ref|YP_003103563.1| ribosome recycling factor [Actinosynnema mirum DSM 43827]
 gi|255924206|gb|ACU39717.1| ribosome recycling factor [Actinosynnema mirum DSM 43827]
          Length = 185

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K+D+ T+RTGR +P+M   +  E YGS  P+NQ+A++ V EPRM 
Sbjct: 6   LLEAEEKMEKAVTVSKEDLATVRTGRATPAMFSRIVAEYYGSMTPINQLASIAVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +DK  + ++E+ I +S+LG+NP  +G V+R+  P+ +EERR  +VKVA    E +K
Sbjct: 66  VVKPFDKGSMTAIEKAIRDSDLGVNPSNDGTVIRVVFPQLSEERRREMVKVAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR   + L +  K G+  ED  A  E +++ +T   I  +D   + K+ E++  
Sbjct: 126 VSIRNIRRKAKEELDRLVKDGEVGEDDGARGEKELENVTHRYIAQVDEAMKNKEAELLEV 185


>gi|254283859|ref|ZP_04958827.1| ribosome recycling factor [gamma proteobacterium NOR51-B]
 gi|219680062|gb|EED36411.1| ribosome recycling factor [gamma proteobacterium NOR51-B]
          Length = 188

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 105/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + ++RM  ++  L  +   +RTGR  PS+LD +++E YG+  PL Q+AN+ V + R L 
Sbjct: 10  SDAEERMEKSLEALDHNFNKIRTGRAHPSLLDSIRIEYYGADTPLIQLANINVEDARTLT 69

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK     +E+ I  S+LGLNP   G V+RIP+P  TEE R   +K A + AE +++
Sbjct: 70  VVAFDKSTTPDIEKAIMRSDLGLNPSSAGDVIRIPMPMLTEETRRGYIKQARSEAESARV 129

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN RRD M  LK+  K  + SED     E  IQK+TD  +  I+    EK+ ++M  
Sbjct: 130 SVRNARRDAMAMLKELEKEKEISEDEQRRGEEQIQKLTDGFVAKIEKKLSEKESDLMEI 188


>gi|304436535|ref|ZP_07396508.1| ribosome recycling factor [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370478|gb|EFM24130.1| ribosome recycling factor [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 185

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ M   I  L+++  +LR GR +P++LD + V  YG+   +NQ+A VTV EP M+
Sbjct: 6   LSKHEESMSKAIEALRREFSSLRAGRATPNLLDKIMVPYYGTPTSVNQLAKVTVPEPHMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ W+K ++  +E  I +S+LGL+P  +G V+R+ +P+ T+ERR  L+K      E++K
Sbjct: 66  VITPWEKSILHEIEIAISKSDLGLSPNSDGNVIRLAIPQPTQERRKELIKTVGKKTEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  + +KK  K  + +ED     ++ +QK+ D  +K +D     K+KE+M  
Sbjct: 126 VALRNIRRDANEAIKKLEKDKEINEDESKRGQDSVQKLVDKFVKQMDEMRAAKEKEVMEI 185


>gi|229545182|ref|ZP_04433907.1| ribosome recycling factor [Enterococcus faecalis TX1322]
 gi|229309727|gb|EEN75714.1| ribosome recycling factor [Enterococcus faecalis TX1322]
          Length = 185

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L++++  +R GR + S+LD ++VE YG+  P+NQ+A++ + E R+L
Sbjct: 6   LATAKEKMTKAEESLRRELGQIRAGRANASLLDRIQVEYYGAPTPVNQLASINIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A +E+ I  S++G++P  +G V+R+ +P+ TEERR  L K     AE SK
Sbjct: 66  MITPFDKNSIADIEKAIQMSDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKKEAENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD MD LKK++K+   +ED + S E D+QK+TD +IKNID+   EK++E++  
Sbjct: 126 VAVRNVRRDAMDELKKAQKNSDITEDELRSFEKDVQKLTDDSIKNIDAITAEKEQELLEV 185


>gi|331001980|ref|ZP_08325500.1| ribosome-recycling factor [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411776|gb|EGG91181.1| ribosome-recycling factor [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 184

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/181 (40%), Positives = 117/181 (64%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
            ++  +++M  +I  L ++   +R GR +P +LD +KV+ YG+  P+ QV NV+V EPR+
Sbjct: 4   SIKKFEEKMNKSIDVLLEEYAAIRAGRANPHVLDRIKVDYYGTATPIQQVGNVSVPEPRI 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + +S W+K ++  +E+ I+ S+LG+NP  +G  +R+  PE TEERR  LVK      E  
Sbjct: 64  IQISPWEKSLLKEIEKAINMSDLGINPTNDGSCIRLVFPELTEERRKELVKDVKKKGEAC 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++RNIRRD +D +KK  K+G+ +ED V   EN IQK+TD  I+ +D   E+K KEI+ 
Sbjct: 124 KVAIRNIRRDAIDAVKKLEKAGEFTEDDVKDGENKIQKMTDKAIERVDKAIEDKSKEILT 183

Query: 186 F 186
            
Sbjct: 184 V 184


>gi|320547289|ref|ZP_08041581.1| ribosome recycling factor [Streptococcus equinus ATCC 9812]
 gi|320448093|gb|EFW88844.1| ribosome recycling factor [Streptococcus equinus ATCC 9812]
          Length = 185

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   + S L ++  ++R GR + S+LD ++VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFEQSHSSLAREFASIRAGRANASLLDRIQVEYYGAMTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +E  I+ S+LG+NP  +G V+R+ +P  TEE R AL K      E +K
Sbjct: 66  LISPFDKSSLKDIEHAINASDLGINPANDGSVIRLVIPALTEETRKALAKDVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED +  LE DIQK TD  +K+ID+    K+KE++  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKVLEKDIQKATDEAVKHIDTMTANKEKELLEV 185


>gi|239815583|ref|YP_002944493.1| ribosome recycling factor [Variovorax paradoxus S110]
 gi|239802160|gb|ACS19227.1| ribosome recycling factor [Variovorax paradoxus S110]
          Length = 189

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/174 (42%), Positives = 109/174 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  +++  + ++  +RTGR + ++LD + VE YGS VPL+QVANV+VL+ R + V  W+
Sbjct: 16  KMNQSLAAFQNNLTKIRTGRANSALLDSIHVEYYGSQVPLSQVANVSVLDSRTISVQPWE 75

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K M A +E+ I ES+LGLNP   G ++R+P+P  +EERR  + K+     E +KI+ RN+
Sbjct: 76  KGMGAKIEKAIRESDLGLNPASMGDLIRVPLPAMSEERRKEMTKLVRNEGESAKIATRNL 135

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD  + +KK  K   ASED     E +IQK+TD  I  ID     K+ EIM  
Sbjct: 136 RRDANESVKKLVKEKLASEDDQKRAEAEIQKVTDRHIAEIDRLVAAKEAEIMAV 189


>gi|331090948|ref|ZP_08339790.1| ribosome-recycling factor [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330405170|gb|EGG84706.1| ribosome-recycling factor [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 183

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 118/186 (63%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+ +  +   ++M  + + L  ++ T+R GR +P +LD + V+ YG   P+ Q AN++V
Sbjct: 1   MNERV--KAFDEKMTKSYNSLVGELATIRAGRANPHVLDKLTVDYYGVPTPIQQAANISV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+ +  W+K MV  +E+ I  S++G+NP  +G V+R+  PE TEERR  L K    
Sbjct: 59  PEPRMIQIQPWEKSMVKEIEKAILTSDIGINPTNDGSVIRLVFPELTEERRKELAKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++K+++RNIRRDG D  KK  K  + SED +  LE+++QK+TD  IK+ID   EEK 
Sbjct: 119 KGEQAKVAIRNIRRDGNDTFKKL-KGTEVSEDEIKDLEDELQKLTDKYIKDIDKAVEEKS 177

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 178 KEVMTV 183


>gi|325290374|ref|YP_004266555.1| ribosome recycling factor [Syntrophobotulus glycolicus DSM 8271]
 gi|324965775|gb|ADY56554.1| ribosome recycling factor [Syntrophobotulus glycolicus DSM 8271]
          Length = 185

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  T+  L+K+ +T+R G  + SMLD + V+ YG+  P+NQVAN++V EPRML
Sbjct: 6   VKETEEKMKKTLEVLRKEFVTIRAGSANQSMLDKIMVDYYGTPTPINQVANISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W+K M+  VE+ I +S+LG+NP+ +G V+R+ +P+ T +RR  +V+     AE+++
Sbjct: 66  VIQPWEKTMIQPVEKAIMKSDLGINPVNDGSVVRLVIPQLTADRRTEIVRTVKKKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRRD  + +KK  K    SED     +  IQK+TD  IK+ID    +K+KEI   
Sbjct: 126 VSVRNIRRDMNEEIKKMEKDKTVSEDESKKGQEKIQKLTDKYIKDIDDVLSKKEKEITEV 185


>gi|254492622|ref|ZP_05105793.1| ribosome recycling factor [Methylophaga thiooxidans DMS010]
 gi|224462143|gb|EEF78421.1| ribosome recycling factor [Methylophaga thiooxydans DMS010]
          Length = 185

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++  DRM  +++ L   M  +R GR   S+LD ++V  YGS VPL+QVANV V + R L 
Sbjct: 7   KDAADRMKKSVAALGTAMAKIRAGRAHTSLLDHLQVPYYGSDVPLSQVANVGVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K+MV+ VE+ I  S+LG+NP+  G  +RIP+P  TEERR  LVKVA   AE +++
Sbjct: 67  VTPWEKDMVSVVEKAIMTSDLGVNPMSAGMTIRIPIPPLTEERRRDLVKVAKGEAENARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED     E ++QK+TD+TIK ID    +K+ ++M  
Sbjct: 127 AVRNIRRDANSTLKDLLKEKEISEDEQRGAEEEVQKLTDATIKEIDQVLADKESDLMEV 185


>gi|332637898|ref|ZP_08416761.1| ribosome recycling factor [Weissella cibaria KACC 11862]
          Length = 185

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RMG     L++++  +R G  +PS+L  V  E YG+  PLNQ+A++TV E R+L
Sbjct: 6   LDSANERMGKAADVLRRELGNIRAGVANPSILRNVTAEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I  S+LGL P  +G V+R+ +P  TEE R +L K     +EK+K
Sbjct: 66  LITPFDKSILKDIEQAIFASDLGLTPANDGSVIRLVIPALTEETRKSLAKEVKGESEKAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD MD  KK+ K+G  SED    LE+DIQK TD+ +KNID    EK+KE++  
Sbjct: 126 VAVRNVRRDAMDDAKKALKNGDMSEDEARKLEDDIQKATDAAVKNIDGIAAEKEKELLTI 185


>gi|289434595|ref|YP_003464467.1| hypothetical protein lse_1230 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170839|emb|CBH27381.1| frr [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313638109|gb|EFS03374.1| ribosome recycling factor [Listeria seeligeri FSL S4-171]
          Length = 185

 Score =  232 bits (594), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A++++ E RML
Sbjct: 6   LTKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISIPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNID+  ++K+ EI+  
Sbjct: 126 VAVRNIRREANEDLKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDNITKDKEAEILEV 185


>gi|153815802|ref|ZP_01968470.1| hypothetical protein RUMTOR_02047 [Ruminococcus torques ATCC 27756]
 gi|317502106|ref|ZP_07960287.1| ribosome recycling factor [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331090380|ref|ZP_08339261.1| ribosome-recycling factor [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846827|gb|EDK23745.1| hypothetical protein RUMTOR_02047 [Ruminococcus torques ATCC 27756]
 gi|316896495|gb|EFV18585.1| ribosome recycling factor [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330401127|gb|EGG80720.1| ribosome-recycling factor [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 183

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 81/186 (43%), Positives = 113/186 (60%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+   L     +M  TI+ L  ++ T+R GR +P +LD + V+ YGS  P+ QVANV+V
Sbjct: 1   MNER--LTTYDSKMTKTINNLDGELATIRAGRANPHVLDKLTVDYYGSPTPIQQVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+K M+  +E+ I  S+LG+NP  +G  +R+  PE TE+RR  L K    
Sbjct: 59  PEARMIQIQPWEKSMLKEIEKAILMSDLGINPTNDGSTVRLVFPELTEDRRKELAKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRNIRRDG    KK  K  + SED +  LE+D+QKITD  I+ ID   E K 
Sbjct: 119 KGEAAKVAVRNIRRDGNVAFKKL-KGTEVSEDEIKDLEDDLQKITDKYIEKIDKMVEVKT 177

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 178 KEIMTV 183


>gi|225026987|ref|ZP_03716179.1| hypothetical protein EUBHAL_01243 [Eubacterium hallii DSM 3353]
 gi|224955672|gb|EEG36881.1| hypothetical protein EUBHAL_01243 [Eubacterium hallii DSM 3353]
          Length = 181

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D+M  +I  L+++  ++R GR +P +LD +KV+ YG+  PL QV N++V EPR++
Sbjct: 2   IKKFEDKMQKSIESLEREYNSIRAGRANPHVLDKIKVDYYGTPTPLQQVGNISVPEPRII 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++ ++E+ I +S++G+NP  +G+V+R+  PE TEERR  LVK      E +K
Sbjct: 62  TIQPWETSLLKAIEKEIMQSDIGINPTNDGKVIRLVFPELTEERRKELVKDVKKKGEAAK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D LKK+ K+ + +ED +   ++ +QK TD  IK ID   ++K KEI+  
Sbjct: 122 VAIRNIRRDANDSLKKANKNSEITEDELKDQQDKVQKATDKYIKTIDGMIDKKSKEILTV 181


>gi|314933438|ref|ZP_07840803.1| ribosome recycling factor [Staphylococcus caprae C87]
 gi|313653588|gb|EFS17345.1| ribosome recycling factor [Staphylococcus caprae C87]
          Length = 184

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 121/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDII--KDTKARMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  V  +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKTSVDDIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKNVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  DHLKK  K G  +ED + S  +D+QK TD++IK ID   E+K+
Sbjct: 119 IGEDAKVSIRNIRRDINDHLKKQEKKGDITEDDLRSQTDDVQKATDNSIKEIDQLVEDKE 178

Query: 181 KEIMHF 186
           ++IM  
Sbjct: 179 QDIMSV 184


>gi|312114736|ref|YP_004012332.1| ribosome recycling factor [Rhodomicrobium vannielii ATCC 17100]
 gi|311219865|gb|ADP71233.1| ribosome recycling factor [Rhodomicrobium vannielii ATCC 17100]
          Length = 188

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 84/183 (45%), Positives = 121/183 (66%), Gaps = 1/183 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEA-YGSHVPLNQVANVTVLEP 63
            D++ I+ RM  +++ LK +   LRTGR S ++LD + V+  YG+ +P+ QVA V   EP
Sbjct: 6   FDIKEIEKRMKSSVASLKSEFGGLRTGRASATLLDPIMVQTSYGAKMPIQQVAAVNAPEP 65

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R++ V VWDK  +  VE+ I ES+LGLNP+++G  LR+P+PE  +ERR  LVK+A  YAE
Sbjct: 66  RLITVQVWDKSNLHGVEKAIRESSLGLNPVIDGLTLRLPIPELNQERRQELVKIAKKYAE 125

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            ++++VRN+R+DGMD +KK  K GK SED        +Q +TD TIK ID+    K+ EI
Sbjct: 126 ATRVAVRNVRKDGMDQIKKLEKDGKISEDESGKTSTKVQDLTDKTIKEIDALLATKEHEI 185

Query: 184 MHF 186
           M  
Sbjct: 186 MQV 188


>gi|300858728|ref|YP_003783711.1| ribosome-recycling factor [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300686182|gb|ADK29104.1| ribosome-recycling factor [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302206435|gb|ADL10777.1| Ribosome-recycling factor (RRF) [Corynebacterium pseudotuberculosis
           C231]
 gi|302330991|gb|ADL21185.1| ribosome recycling factor [Corynebacterium pseudotuberculosis 1002]
 gi|308276677|gb|ADO26576.1| ribosome recycling factor [Corynebacterium pseudotuberculosis I19]
          Length = 185

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ MG T+   + D++ +RTGR +P+M + V  + YG   P+ Q+A ++V E RML
Sbjct: 6   LLESEEHMGTTVERTRDDLVNIRTGRANPAMFNGVIADYYGVPTPITQMATISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++  M+  +E  I  S+LG+NP  +GQVLR+ VP+ TEERR  +VKVA +  E  K
Sbjct: 66  LIKPYEMSMMGEIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRKEMVKVAKSKGEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RR GMD LKK +K G A ED V + E ++ KIT   +  +D    +K+ E+M  
Sbjct: 126 IAIRNVRRKGMDQLKKIQKDGDAGEDEVQAAEKELDKITAKYVAQVDEVVSKKEAELMEV 185


>gi|228475010|ref|ZP_04059738.1| ribosome recycling factor [Staphylococcus hominis SK119]
 gi|314936580|ref|ZP_07843927.1| ribosome recycling factor [Staphylococcus hominis subsp. hominis
           C80]
 gi|228270995|gb|EEK12383.1| ribosome recycling factor [Staphylococcus hominis SK119]
 gi|313655199|gb|EFS18944.1| ribosome recycling factor [Staphylococcus hominis subsp. hominis
           C80]
          Length = 184

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 82/186 (44%), Positives = 124/186 (66%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+++I  Q+ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSEII--QDTKSRMKKSIENLSRELANISAGRANSNLLNGVNVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  VA +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRITVPALTEERRKELVKNVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E SK+S+RNIRRD  D LKK  K+G  +ED + S   D+QK+TD++IK ID+  +EK+
Sbjct: 119 IGEDSKVSIRNIRRDINDQLKKDEKNGDITEDDLRSQTEDVQKVTDNSIKEIDNLVDEKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|296110369|ref|YP_003620750.1| ribosome recycling factor [Leuconostoc kimchii IMSNU 11154]
 gi|295831900|gb|ADG39781.1| ribosome recycling factor [Leuconostoc kimchii IMSNU 11154]
          Length = 181

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 77/182 (42%), Positives = 122/182 (67%), Gaps = 3/182 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            +L + K RM      L++++ ++RTGR +P +LD ++VE YG+  PLNQVA+++V E R
Sbjct: 3   FNLTDAKARMQGAQDALQRELGSIRTGRANPHILDRIEVEYYGAMTPLNQVASISVPEAR 62

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L+++ +DK ++  + R I+ S+LGLNP  +G ++R+ +P+ TEE R  LVK   A AEK
Sbjct: 63  ILMITPFDKTVLEEIIRAINISDLGLNPASDGNIVRLAIPQMTEEGRKDLVKQVKAEAEK 122

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+SVRN+RRD MD +K   K  +  ED     E+D+QK+TD  IK ID+   +K+KE++
Sbjct: 123 AKVSVRNVRRDAMDSVK---KDKELPEDDARHAEDDVQKLTDENIKAIDTIASDKEKELL 179

Query: 185 HF 186
             
Sbjct: 180 TI 181


>gi|260890240|ref|ZP_05901503.1| ribosome recycling factor [Leptotrichia hofstadii F0254]
 gi|260859860|gb|EEX74360.1| ribosome recycling factor [Leptotrichia hofstadii F0254]
          Length = 185

 Score =  232 bits (593), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M  ++   K     +R GR S SMLD V VEAYGS  PLNQV  V+  E R+L
Sbjct: 6   LKEAEEKMQKSVENTKTKFSHVRAGRASVSMLDGVTVEAYGSATPLNQVGTVSAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++ ++E+ I ++NLG NP  +G+++R+ VPE TE+RR   VK+    AE+ K
Sbjct: 66  VIDPWDKSLIPAIEKTILQANLGFNPSNDGKIIRLVVPELTEDRRKEYVKMVKKEAEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+R++  + L+K  K  + +ED + S E  +QK TD  I  +D    +K+KE++  
Sbjct: 126 VAIRNVRKEVNNKLRKLEKDSEITEDELKSSEEKVQKSTDKFIAQVDDALSKKEKELLTV 185


>gi|172040501|ref|YP_001800215.1| ribosome recycling factor [Corynebacterium urealyticum DSM 7109]
 gi|238057837|sp|B1VG92|RRF_CORU7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|171851805|emb|CAQ04781.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 185

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/186 (39%), Positives = 123/186 (66%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+++  L   ++RM  ++ F ++D+ T+RTGR +P+M + V  E YG   P+ Q+A ++V
Sbjct: 2   MDEI--LLECEERMTSSVEFAREDLTTIRTGRANPAMFNSVIAEYYGVPTPITQMATISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+++  +++  +  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +V+ A +
Sbjct: 60  PEARMMLIKPYEQSQIQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRREMVRQAKS 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +KI++RNIRR GM+ L K +K G A ED V + EN+++KIT + +K +D   E K+
Sbjct: 120 KGEDAKIAIRNIRRHGMEQLAKIQKDGDAGEDEVRASENELEKITSNYVKQVDELVERKE 179

Query: 181 KEIMHF 186
           +E+M  
Sbjct: 180 EELMEV 185


>gi|113953351|ref|YP_731208.1| ribosome recycling factor [Synechococcus sp. CC9311]
 gi|122945600|sp|Q0I8L4|RRF_SYNS3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|113880702|gb|ABI45660.1| ribosome recycling factor [Synechococcus sp. CC9311]
          Length = 182

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/179 (34%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            +++  M  ++   +++  T+RTGR +PS+LD + VE YG+  PL  +A+++  + + + 
Sbjct: 4   SDLEANMRKSVEATQRNFNTIRTGRANPSLLDRINVEYYGADTPLKSLASLSTPDSQTIA 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +D   +A +E+ I  S+LG  P  +G+++RI VP  TEERR    K+A  Y+E+ K+
Sbjct: 64  VQPFDMGSLALIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLAAKYSEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++R++RRD +D +KK  K G  SED     ++ +QK TD  I  ++    +K+ EI+  
Sbjct: 124 ALRSVRRDAIDKIKKQEKEGDLSEDQSRDEQDQVQKTTDRFIAELEKHLADKEVEILKV 182


>gi|319762178|ref|YP_004126115.1| ribosome recycling factor [Alicycliphilus denitrificans BC]
 gi|330826010|ref|YP_004389313.1| ribosome recycling factor [Alicycliphilus denitrificans K601]
 gi|317116739|gb|ADU99227.1| ribosome recycling factor [Alicycliphilus denitrificans BC]
 gi|329311382|gb|AEB85797.1| ribosome recycling factor [Alicycliphilus denitrificans K601]
          Length = 186

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N+  +M  +I+ LK ++  +RTGR +P++LD + VE YGS VPL+QVANV++L+ R + 
Sbjct: 8   KNLDAKMDQSIAALKNNLSKVRTGRANPALLDSIHVEYYGSMVPLSQVANVSLLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A VE+ I ES+LGLNP   G ++R+P+P  +EERR  + K+A    E +K+
Sbjct: 68  VQPWEKNMGAKVEKAIRESDLGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGENAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + +KK  K   ASED     E DIQK TD  I  ID+    K+++I+  
Sbjct: 128 AVRNLRRDANEAVKKLVKEKLASEDEQKRAEADIQKTTDKHIAEIDALVAAKEQDILAI 186


>gi|221632994|ref|YP_002522217.1| ribosome recycling factor [Thermomicrobium roseum DSM 5159]
 gi|254809539|sp|B9L003|RRF_THERP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|221155498|gb|ACM04625.1| ribosome recycling factor [Thermomicrobium roseum DSM 5159]
          Length = 185

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + RM  +I  L++++  +R GR +PS+L+ ++V  YG+  PLNQ+A ++  E R+L
Sbjct: 6   LRDAEQRMKKSIELLRQELAGIRAGRAAPSLLEHLEVNYYGTPTPLNQLATISAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV VWD+  V++VE+ I +S LGLNP V+GQ LRI +P  TEERR  LVK+ H   E++K
Sbjct: 66  VVQVWDRNAVSAVEKAIRQSELGLNPSVDGQTLRIQLPPLTEERRRQLVKLVHEEVEETK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +  +K+  K+ + SED     E  +Q +T+  I   D   ++K+ +I+  
Sbjct: 126 VAIRNIRRDALADIKELLKNKEISEDDERRAEQRLQDLTNRYIAEADKLGKQKEHDILEI 185


>gi|71903032|ref|YP_279835.1| ribosome recycling factor [Streptococcus pyogenes MGAS6180]
 gi|123640384|sp|Q48UX6|RRF_STRPM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|71802127|gb|AAX71480.1| ribosome recycling factor [Streptococcus pyogenes MGAS6180]
          Length = 185

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  IK ID    EK+KE++  
Sbjct: 126 IAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKVTDDAIKEIDRMTAEKEKELLSV 185


>gi|313813385|gb|EFS51099.1| ribosome recycling factor [Propionibacterium acnes HL025PA1]
 gi|327334225|gb|EGE75939.1| ribosome recycling factor [Propionibacterium acnes HL097PA1]
          Length = 184

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 64/186 (34%), Positives = 113/186 (60%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ + +MG  +   +++   +RTGR +P+M + + VE Y +  PL Q+A+  V
Sbjct: 1   MSDII--KDAEKKMGSAVDHAREEFAAIRTGRANPAMFNKLMVEYYDTPTPLQQLASFQV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R ++++ +DK  V  VE+ I +S+LG+NP  +G V+R  +P  TEERR   +K+A  
Sbjct: 59  PEARTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKT 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ +I+VRN+RR   D +KK  K  + SED +  LE ++ ++T   ++ ID   + K+
Sbjct: 119 KAEEGRIAVRNVRRASNDVVKKQEKDKEISEDEMTRLEKELDQVTRKYVEQIDELLKSKE 178

Query: 181 KEIMHF 186
            E++  
Sbjct: 179 SELLEI 184


>gi|330950678|gb|EGH50938.1| ribosome recycling factor [Pseudomonas syringae Cit 7]
          Length = 213

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV
Sbjct: 2   INEI--KKDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A  
Sbjct: 60  KDSRTLQVVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARD 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE ++++VRNIRRD +  LK   K  + SED      +DIQK+TD  +  I+   ++K+
Sbjct: 120 AAEDARVAVRNIRRDALSQLKDLVKEKEISEDEERRAADDIQKLTDKFVAEIEVAVKQKE 179

Query: 181 KEIMHF 186
            ++M  
Sbjct: 180 ADLMAV 185


>gi|163750354|ref|ZP_02157594.1| ribosome recycling factor [Shewanella benthica KT99]
 gi|161329844|gb|EDQ00830.1| ribosome recycling factor [Shewanella benthica KT99]
          Length = 185

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 85/179 (47%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + + RM   I   K  M  +RTGR  PS+LD +KV  YGS  PL QV NVT+ + R L 
Sbjct: 7   ADAQTRMAKCIEATKTQMAKVRTGRAHPSLLDSIKVSYYGSMTPLKQVGNVTIEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VSV+D  M+ +VE+ I  S+LGLNP+  G V+RIP+P  TEERR  L+KV  A AE S+I
Sbjct: 67  VSVFDVSMIKAVEKAIMTSDLGLNPMSAGAVIRIPLPSLTEERRKDLIKVVRAEAENSRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD    +K   K  + +ED V   E++IQK TD+ IK ID     K+ E+M  
Sbjct: 127 SVRNVRRDANSDVKVLEKEKECTEDDVHRTEDEIQKFTDAHIKQIDDLLSAKEAELMKV 185


>gi|291563192|emb|CBL42008.1| ribosome recycling factor [butyrate-producing bacterium SS3/4]
          Length = 184

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/181 (38%), Positives = 112/181 (61%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+  +++M  +I  L  +  ++R GR +P +LD +KV+ YG+  P+ QV N++V E RM
Sbjct: 4   ELKVYEEKMEKSIDALLNEYASIRAGRANPHVLDKIKVDYYGTPTPIQQVGNISVPEARM 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +++  W+K ++  +E+ I  S LG+NP  +G V+R+  PE TEERR  L K      + +
Sbjct: 64  ILIQPWEKSLIRPIEKAIQTSELGINPSNDGSVIRLVFPELTEERRKELAKDVKKKGDGA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++RNIRRD  +  KK  KS + SED +  L   +QK+TD +I+ ID   E K KEI+ 
Sbjct: 124 KVAIRNIRRDANEAFKKMEKSDEISEDDLKELTEKVQKLTDKSIEKIDKAVENKTKEILT 183

Query: 186 F 186
            
Sbjct: 184 V 184


>gi|284044967|ref|YP_003395307.1| ribosome recycling factor [Conexibacter woesei DSM 14684]
 gi|283949188|gb|ADB51932.1| ribosome recycling factor [Conexibacter woesei DSM 14684]
          Length = 185

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ ++RM  ++   + +  ++RTGR +P++LD + VE YG++ PL Q+A +   E RML
Sbjct: 6   LQDARERMSKSVESTRHEFGSVRTGRATPALLDRIMVEYYGANTPLKQLATINAPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  +DK  + ++E+ I ES++GL P  +G ++R+ +PE TEERR  LVKV    AE+ +
Sbjct: 66  SVQPFDKSSIKAIEKAIMESDVGLTPNNDGNLIRLSIPELTEERRRQLVKVVRNIAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +RN+RRD M  L++ R +G+   D     E ++QK+TD  +  +++F + K++EI+  
Sbjct: 126 IGIRNVRRDTMHDLRELRDAGEVGADDEHRAEAELQKLTDEKVGELETFLKNKEEEILEV 185


>gi|227524388|ref|ZP_03954437.1| ribosome recycling factor [Lactobacillus hilgardii ATCC 8290]
 gi|227088619|gb|EEI23931.1| ribosome recycling factor [Lactobacillus hilgardii ATCC 8290]
          Length = 187

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K +M      L+ ++ ++R GR + S+L  V V+ YG+  PLNQ+A++++ E R++
Sbjct: 8   LNEAKTKMKKAQEVLEHELGSIRAGRANASLLSGVTVDYYGAPTPLNQIASISIPEARVI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + ++E+GI+E++LGL+P  +G  +R+ +P  TEERR  + K   A  EKSK
Sbjct: 68  LITPYDKSSLDNIEKGIYEADLGLSPANDGTAIRLAIPALTEERRREVAKQVKATGEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD  K+  KS + ++D +  LE+ +QK+TD++IK++D    +K+ E+M+
Sbjct: 128 VAVRNVRREAMDTFKRGNKSEEITDDELHRLEDQVQKLTDNSIKSVDKIVADKENEVMN 186


>gi|317121843|ref|YP_004101846.1| ribosome recycling factor [Thermaerobacter marianensis DSM 12885]
 gi|315591823|gb|ADU51119.1| ribosome recycling factor [Thermaerobacter marianensis DSM 12885]
          Length = 184

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 113/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++RM   +   ++++  +R GR +P++L+ ++V+ YG+  P++Q+A +T  EPRML
Sbjct: 6   LRQARERMEARVENFRRELAAVRAGRATPALLEKIRVDYYGTPTPIHQLATITAPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WDK ++  +E+ I +S+LG+NP  +GQV+RI +P  TEE R  LVK     AE+ +
Sbjct: 66  VVQPWDKSVMGEIEKAIAKSDLGVNPSSDGQVIRIVLPPLTEETRNELVKRVRKMAEEER 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RR   D LK+    G  SED +   +  +Q++TD TI  ID     K+KEI   
Sbjct: 126 VAVRNVRRQANDDLKELEDQG-FSEDEIRRAQEKVQELTDRTIARIDELLAAKEKEIREV 184


>gi|24380004|ref|NP_721959.1| ribosome recycling factor [Streptococcus mutans UA159]
 gi|290580017|ref|YP_003484409.1| putative ribosome recycling factor [Streptococcus mutans NN2025]
 gi|34924954|sp|Q8DSY2|RRF_STRMU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|24377992|gb|AAN59265.1|AE014993_9 putative ribosome recycling factor [Streptococcus mutans UA159]
 gi|254996916|dbj|BAH87517.1| putative ribosome recycling factor [Streptococcus mutans NN2025]
          Length = 185

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++VE YG   PLNQ+A++TV E R+L
Sbjct: 6   VEKAKERFEQSHQSLAREFGSIRAGRANASLLDRIEVEYYGVPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +DK  +  +E  I+ S++G+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVSPFDKSSLKDIEHAINASDIGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K  + +ED + SLE DIQK+TD  +K+IDS    K+KE++  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKIKEITEDELKSLEKDIQKVTDEAVKHIDSMTANKEKELLEV 185


>gi|223044216|ref|ZP_03614253.1| ribosome recycling factor [Staphylococcus capitis SK14]
 gi|222442366|gb|EEE48474.1| ribosome recycling factor [Staphylococcus capitis SK14]
          Length = 184

 Score =  232 bits (593), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/186 (41%), Positives = 122/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I  ++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDII--KDTKARMQKSIDNLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  V  +E+ I  +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKTSVDDIEKAIIAANLGVNPTSDGEVIRISVPALTEERRKELVKNVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  DHLKK  K+G  +ED + S  +D+QK TD++IK ID   ++K+
Sbjct: 119 IGEDAKVSIRNIRRDINDHLKKEEKNGDITEDDLRSQTDDVQKATDNSIKEIDQLVDDKE 178

Query: 181 KEIMHF 186
           ++IM  
Sbjct: 179 QDIMSV 184


>gi|300173184|ref|YP_003772350.1| ribosome Recycling Factor, RRF [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887563|emb|CBL91531.1| Ribosome Recycling Factor, RRF [Leuconostoc gasicomitatum LMG
           18811]
          Length = 181

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 77/182 (42%), Positives = 120/182 (65%), Gaps = 3/182 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            +L + K RM      LK+++ ++RTGR +P +LD ++VE YG+  PL QVA+++V E R
Sbjct: 3   FNLTDAKTRMQGAQDALKRELGSIRTGRANPHILDRIEVEYYGAMTPLKQVASISVPEAR 62

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L+++ +DK  +  + R I+ S+LGLNP  +G ++R+ +P+ TEE R  L K   A AEK
Sbjct: 63  ILLITPFDKSALEEIVRAINMSDLGLNPASDGNIVRLAIPQMTEEGRKDLAKQVKAEAEK 122

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+S+RN+RRD MD +K   K  +  ED V + E+D+QK+TD  IK ID    EK+KE++
Sbjct: 123 AKVSIRNVRRDAMDTVK---KDKELPEDDVRNAEDDVQKLTDDNIKAIDVIAAEKEKELL 179

Query: 185 HF 186
             
Sbjct: 180 TI 181


>gi|304320071|ref|YP_003853714.1| putative ribosome recycling factor [Parvularcula bermudensis
           HTCC2503]
 gi|303298974|gb|ADM08573.1| putative ribosome recycling factor [Parvularcula bermudensis
           HTCC2503]
          Length = 183

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 85/186 (45%), Positives = 121/186 (65%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M    D++ ++ RM   I+ LK +   LR+GR + S+LD V V AYGS +PLNQV  V V
Sbjct: 1   MADGPDMKELEKRMDGAIASLKSEYAGLRSGRATISLLDPVTVNAYGSEMPLNQVGTVGV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V VWDK +V++VE+GI ES L LNP+ +GQ +R+P+P  TEERR  L K+   
Sbjct: 61  PDARTLSVQVWDKGLVSAVEKGIRESGLDLNPVTDGQTVRVPMPPMTEERRRDLAKLTGK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE +K+++RN+RRDGM+  KK+      SED    +  ++QK+TD+ +K ID    +K+
Sbjct: 121 YAEAAKVAIRNVRRDGMEEAKKAE---GVSEDDQKRMSEEVQKLTDAKVKEIDQMHAQKE 177

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 178 KEIMQV 183


>gi|148984686|ref|ZP_01817954.1| ribosome recycling factor [Streptococcus pneumoniae SP3-BS71]
 gi|148988384|ref|ZP_01819831.1| ribosome recycling factor [Streptococcus pneumoniae SP6-BS73]
 gi|148998620|ref|ZP_01826060.1| ribosome recycling factor [Streptococcus pneumoniae SP11-BS70]
 gi|149002494|ref|ZP_01827428.1| ribosome recycling factor [Streptococcus pneumoniae SP14-BS69]
 gi|149006380|ref|ZP_01830092.1| ribosome recycling factor [Streptococcus pneumoniae SP18-BS74]
 gi|168485896|ref|ZP_02710404.1| ribosome recycling factor [Streptococcus pneumoniae CDC1087-00]
 gi|168575607|ref|ZP_02721543.1| ribosome recycling factor [Streptococcus pneumoniae MLV-016]
 gi|169832481|ref|YP_001694393.1| ribosome recycling factor [Streptococcus pneumoniae Hungary19A-6]
 gi|194397625|ref|YP_002037583.1| ribosome recycling factor [Streptococcus pneumoniae G54]
 gi|221231712|ref|YP_002510864.1| ribosome recycling factor [Streptococcus pneumoniae ATCC 700669]
 gi|225854450|ref|YP_002735962.1| ribosome recycling factor [Streptococcus pneumoniae JJA]
 gi|225861166|ref|YP_002742675.1| ribosome recycling factor [Streptococcus pneumoniae Taiwan19F-14]
 gi|237650519|ref|ZP_04524771.1| ribosome recycling factor [Streptococcus pneumoniae CCRI 1974]
 gi|237820813|ref|ZP_04596658.1| ribosome recycling factor [Streptococcus pneumoniae CCRI 1974M2]
 gi|298230564|ref|ZP_06964245.1| ribosome recycling factor [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254562|ref|ZP_06978148.1| ribosome recycling factor [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298503047|ref|YP_003724987.1| ribosome recycling factor [Streptococcus pneumoniae TCH8431/19A]
 gi|307067602|ref|YP_003876568.1| ribosome recycling factor [Streptococcus pneumoniae AP200]
 gi|307127503|ref|YP_003879534.1| ribosome recycling factor [Streptococcus pneumoniae 670-6B]
 gi|226749942|sp|B5E448|RRF_STRP4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238688288|sp|B1IBA8|RRF_STRPI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809533|sp|B8ZP45|RRF_STRPJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809535|sp|C1CDU1|RRF_STRZJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809537|sp|C1CRV3|RRF_STRZT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|147755618|gb|EDK62665.1| ribosome recycling factor [Streptococcus pneumoniae SP11-BS70]
 gi|147759431|gb|EDK66423.1| ribosome recycling factor [Streptococcus pneumoniae SP14-BS69]
 gi|147762157|gb|EDK69119.1| ribosome recycling factor [Streptococcus pneumoniae SP18-BS74]
 gi|147923077|gb|EDK74192.1| ribosome recycling factor [Streptococcus pneumoniae SP3-BS71]
 gi|147926065|gb|EDK77139.1| ribosome recycling factor [Streptococcus pneumoniae SP6-BS73]
 gi|168994983|gb|ACA35595.1| ribosome recycling factor [Streptococcus pneumoniae Hungary19A-6]
 gi|183571057|gb|EDT91585.1| ribosome recycling factor [Streptococcus pneumoniae CDC1087-00]
 gi|183578469|gb|EDT98997.1| ribosome recycling factor [Streptococcus pneumoniae MLV-016]
 gi|194357292|gb|ACF55740.1| ribosome recycling factor [Streptococcus pneumoniae G54]
 gi|220674172|emb|CAR68698.1| ribosome recycling factor [Streptococcus pneumoniae ATCC 700669]
 gi|225723622|gb|ACO19475.1| ribosome recycling factor [Streptococcus pneumoniae JJA]
 gi|225727526|gb|ACO23377.1| ribosome recycling factor [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238642|gb|ADI69773.1| ribosome recycling factor [Streptococcus pneumoniae TCH8431/19A]
 gi|301799925|emb|CBW32506.1| ribosome recycling factor [Streptococcus pneumoniae OXC141]
 gi|306409139|gb|ADM84566.1| Ribosome recycling factor [Streptococcus pneumoniae AP200]
 gi|306484565|gb|ADM91434.1| ribosome recycling factor [Streptococcus pneumoniae 670-6B]
 gi|327389222|gb|EGE87567.1| ribosome recycling factor [Streptococcus pneumoniae GA04375]
 gi|332075559|gb|EGI86027.1| ribosome recycling factor [Streptococcus pneumoniae GA17545]
 gi|332076224|gb|EGI86690.1| ribosome recycling factor [Streptococcus pneumoniae GA41301]
 gi|332202800|gb|EGJ16869.1| ribosome recycling factor [Streptococcus pneumoniae GA41317]
          Length = 185

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 117/186 (62%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  VI ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+
Sbjct: 1   MANVI-IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K    
Sbjct: 60  PEARVLLVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+
Sbjct: 120 VGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKE 179

Query: 181 KEIMHF 186
           KE++  
Sbjct: 180 KELLEV 185


>gi|253580861|ref|ZP_04858124.1| ribosome recycling factor [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847931|gb|EES75898.1| ribosome recycling factor [Ruminococcus sp. 5_1_39BFAA]
          Length = 183

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M  T++ L+ +++T+R GR +P +LD + V+ YG+  PL QVAN+TV E RM+
Sbjct: 5   IQKYEEKMKKTLASLESELVTIRAGRANPHILDKLAVDYYGAPTPLQQVANITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++  +E+ I  S+LGLNP  +G+V+R+  PE TEERR  LVK      E +K
Sbjct: 65  QIQPWESSLIKGIEKAILTSDLGLNPSNDGKVIRLVFPELTEERRKELVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D  KK  K    SED +  LE  IQK TD  IK +D+  + K KEIM  
Sbjct: 125 VAVRNIRRDANDAFKKLAKQ-DVSEDEIKELEEKIQKSTDKYIKEVDAAVDAKSKEIMTV 183


>gi|168491033|ref|ZP_02715176.1| ribosome recycling factor [Streptococcus pneumoniae CDC0288-04]
 gi|183574722|gb|EDT95250.1| ribosome recycling factor [Streptococcus pneumoniae CDC0288-04]
          Length = 185

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 117/186 (62%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  +I ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+
Sbjct: 1   MANII-IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K    
Sbjct: 60  PEARVLLVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+
Sbjct: 120 VGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKE 179

Query: 181 KEIMHF 186
           KE++  
Sbjct: 180 KELLEV 185


>gi|159044043|ref|YP_001532837.1| ribosome recycling factor [Dinoroseobacter shibae DFL 12]
 gi|190360241|sp|A8LK37|RRF_DINSH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157911803|gb|ABV93236.1| ribosome recycling factor [Dinoroseobacter shibae DFL 12]
          Length = 188

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 83/176 (47%), Positives = 116/176 (65%), Gaps = 1/176 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM   ++ L+ +  +LRTGR S SML+ V V+AYG   P+NQV  V V EPRM+ ++V
Sbjct: 14  KRRMDGALASLRTEFASLRTGRASASMLEPVMVDAYGQKTPINQVGTVNVPEPRMVTINV 73

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE +++++R
Sbjct: 74  WDKSLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAAQYAEHARVAIR 133

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRDGMD LKK +  G  SED      +++Q +TD+ IK +D   E K+ EIM  
Sbjct: 134 NVRRDGMDQLKKFKADG-MSEDDHKIWSDEVQALTDAEIKKVDDALENKQSEIMQV 188


>gi|297821238|ref|XP_002878502.1| hypothetical protein ARALYDRAFT_907901 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324340|gb|EFH54761.1| hypothetical protein ARALYDRAFT_907901 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 275

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 66/178 (37%), Positives = 109/178 (61%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K +M  TI  L+    ++RTGR + +MLD ++VE YGS V L  +A ++  +   L++
Sbjct: 98  DVKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLL 157

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +DK  + ++E+ I  S+LG+ P  +G V+R+ +P  T ERR  L KV    +E+ K++
Sbjct: 158 QPYDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSERRKELSKVVAKQSEEGKVA 217

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRRD +    K  K  K SED V  L +D+QK+ D  +K I+  +++K+KE+M  
Sbjct: 218 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEKELMKV 275


>gi|237734608|ref|ZP_04565089.1| flagellar biosynthetic protein flhB [Mollicutes bacterium D7]
 gi|229382428|gb|EEO32519.1| flagellar biosynthetic protein flhB [Coprobacillus sp. D7]
          Length = 181

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 116/180 (64%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM  TI   ++D+ ++RTGR +P+MLD V V  YGS  P+NQ+A ++V+E R L
Sbjct: 6   LDDTNERMTKTIESFQRDLSSVRTGRANPNMLDRVMVNYYGSPTPVNQIAGISVVEGRQL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E GI+E++LGL P  +G+++RI VP  TEERR    K    +AE +K
Sbjct: 66  VIKPYDKSSIKDIEHGIYEADLGLTPQNDGEIIRIMVPALTEERRKEFAKNVWKFAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D +KK+      SED + + +  +QK+TD  +K ID   + K+K+IM  
Sbjct: 126 VSIRNIRRDSNDEIKKT----DGSEDEIKAGQERVQKLTDKFVKEIDEIAKVKEKDIMTV 181


>gi|170017339|ref|YP_001728258.1| ribosome recycling factor [Leuconostoc citreum KM20]
 gi|190360251|sp|B1MZ62|RRF_LEUCK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169804196|gb|ACA82814.1| Ribosome recycling factor [Leuconostoc citreum KM20]
          Length = 181

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 81/182 (44%), Positives = 121/182 (66%), Gaps = 3/182 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL + K RM      L++++ ++RTGR +P +LD ++VE YG+  PLNQVA+++V E R
Sbjct: 3   FDLTDAKSRMQGAQDALQRELTSIRTGRANPHILDRIEVEYYGAMTPLNQVASISVPEAR 62

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L+++ +DK  +  + R I+ S+LGLNP  +G ++R+ +P+ TEE R  L K   A AEK
Sbjct: 63  VLLITPFDKTALEEIIRAINMSDLGLNPSSDGNIVRLMIPQMTEEGRKDLAKQVKAEAEK 122

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+SVRN+RRD MD +K   K  +  ED V   ENDIQK+TD+ IK ID    EK+KE++
Sbjct: 123 AKVSVRNVRRDAMDSVK---KEKEMPEDDVRKAENDIQKLTDNNIKAIDDIASEKEKELL 179

Query: 185 HF 186
             
Sbjct: 180 TI 181


>gi|313633414|gb|EFS00248.1| ribosome recycling factor [Listeria seeligeri FSL N1-067]
          Length = 176

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/176 (41%), Positives = 120/176 (68%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A++++ E RML+++ 
Sbjct: 1   KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISIPEARMLLITP 60

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K++VR
Sbjct: 61  YDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVR 120

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNID+  ++K+ EI+  
Sbjct: 121 NIRREANEDLKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDNITKDKEAEILEV 176


>gi|227551763|ref|ZP_03981812.1| ribosome recycling factor [Enterococcus faecium TX1330]
 gi|257878533|ref|ZP_05658186.1| ribosome recycling factor [Enterococcus faecium 1,230,933]
 gi|257883168|ref|ZP_05662821.1| ribosome recycling factor [Enterococcus faecium 1,231,502]
 gi|257884335|ref|ZP_05663988.1| ribosome recycling factor [Enterococcus faecium 1,231,501]
 gi|257887076|ref|ZP_05666729.1| ribosome recycling factor [Enterococcus faecium 1,141,733]
 gi|257889270|ref|ZP_05668923.1| ribosome recycling factor [Enterococcus faecium 1,231,410]
 gi|257895641|ref|ZP_05675294.1| ribosome recycling factor [Enterococcus faecium Com12]
 gi|257898231|ref|ZP_05677884.1| ribosome recycling factor [Enterococcus faecium Com15]
 gi|258615941|ref|ZP_05713711.1| ribosome recycling factor [Enterococcus faecium DO]
 gi|260560118|ref|ZP_05832296.1| ribosome recycling factor [Enterococcus faecium C68]
 gi|261208147|ref|ZP_05922821.1| ribosome recycling factor [Enterococcus faecium TC 6]
 gi|289566196|ref|ZP_06446629.1| ribosome recycling factor [Enterococcus faecium D344SRF]
 gi|293377748|ref|ZP_06623937.1| ribosome recycling factor [Enterococcus faecium PC4.1]
 gi|293556642|ref|ZP_06675207.1| ribosome recycling factor [Enterococcus faecium E1039]
 gi|293560147|ref|ZP_06676650.1| ribosome recycling factor [Enterococcus faecium E1162]
 gi|293567410|ref|ZP_06678757.1| ribosome recycling factor [Enterococcus faecium E1071]
 gi|293570620|ref|ZP_06681671.1| ribosome recycling factor [Enterococcus faecium E980]
 gi|294613944|ref|ZP_06693879.1| ribosome recycling factor [Enterococcus faecium E1636]
 gi|294620329|ref|ZP_06699645.1| ribosome recycling factor [Enterococcus faecium E1679]
 gi|294620756|ref|ZP_06699963.1| ribosome recycling factor [Enterococcus faecium U0317]
 gi|314937498|ref|ZP_07844831.1| ribosome recycling factor [Enterococcus faecium TX0133a04]
 gi|314942157|ref|ZP_07849011.1| ribosome recycling factor [Enterococcus faecium TX0133C]
 gi|314947503|ref|ZP_07850918.1| ribosome recycling factor [Enterococcus faecium TX0082]
 gi|314951490|ref|ZP_07854539.1| ribosome recycling factor [Enterococcus faecium TX0133A]
 gi|314992580|ref|ZP_07857998.1| ribosome recycling factor [Enterococcus faecium TX0133B]
 gi|314995485|ref|ZP_07860585.1| ribosome recycling factor [Enterococcus faecium TX0133a01]
 gi|227179068|gb|EEI60040.1| ribosome recycling factor [Enterococcus faecium TX1330]
 gi|257812761|gb|EEV41519.1| ribosome recycling factor [Enterococcus faecium 1,230,933]
 gi|257818826|gb|EEV46154.1| ribosome recycling factor [Enterococcus faecium 1,231,502]
 gi|257820173|gb|EEV47321.1| ribosome recycling factor [Enterococcus faecium 1,231,501]
 gi|257823130|gb|EEV50062.1| ribosome recycling factor [Enterococcus faecium 1,141,733]
 gi|257825630|gb|EEV52256.1| ribosome recycling factor [Enterococcus faecium 1,231,410]
 gi|257832206|gb|EEV58627.1| ribosome recycling factor [Enterococcus faecium Com12]
 gi|257836143|gb|EEV61217.1| ribosome recycling factor [Enterococcus faecium Com15]
 gi|260073953|gb|EEW62277.1| ribosome recycling factor [Enterococcus faecium C68]
 gi|260077581|gb|EEW65298.1| ribosome recycling factor [Enterococcus faecium TC 6]
 gi|289161974|gb|EFD09841.1| ribosome recycling factor [Enterococcus faecium D344SRF]
 gi|291589807|gb|EFF21608.1| ribosome recycling factor [Enterococcus faecium E1071]
 gi|291593219|gb|EFF24793.1| ribosome recycling factor [Enterococcus faecium E1636]
 gi|291593441|gb|EFF24999.1| ribosome recycling factor [Enterococcus faecium E1679]
 gi|291599736|gb|EFF30746.1| ribosome recycling factor [Enterococcus faecium U0317]
 gi|291601177|gb|EFF31464.1| ribosome recycling factor [Enterococcus faecium E1039]
 gi|291605880|gb|EFF35311.1| ribosome recycling factor [Enterococcus faecium E1162]
 gi|291609291|gb|EFF38562.1| ribosome recycling factor [Enterococcus faecium E980]
 gi|292643748|gb|EFF61869.1| ribosome recycling factor [Enterococcus faecium PC4.1]
 gi|313590319|gb|EFR69164.1| ribosome recycling factor [Enterococcus faecium TX0133a01]
 gi|313592872|gb|EFR71717.1| ribosome recycling factor [Enterococcus faecium TX0133B]
 gi|313596330|gb|EFR75175.1| ribosome recycling factor [Enterococcus faecium TX0133A]
 gi|313599080|gb|EFR77925.1| ribosome recycling factor [Enterococcus faecium TX0133C]
 gi|313643139|gb|EFS07719.1| ribosome recycling factor [Enterococcus faecium TX0133a04]
 gi|313646053|gb|EFS10633.1| ribosome recycling factor [Enterococcus faecium TX0082]
          Length = 185

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/186 (37%), Positives = 120/186 (64%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I +   K++M      L++++  +R GR + S+LD + V  YG+  PLNQ+A++ +
Sbjct: 1   MADAI-MTEAKEKMKKAAQNLQRELGQIRAGRANASLLDRITVNYYGAPTPLNQMASIQI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+++ +DK ++  VE+ I  S++G++P  +G V+R+ +P+ TEERR  L K    
Sbjct: 60  PEARVLMITPFDKSILQDVEKAIMASDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE +KI++RNIRRD +D  KK +K+G  +ED +  LE D+Q +TD++IK +D    +K+
Sbjct: 120 EAENAKIAIRNIRRDAIDEYKKQQKNGDITEDDLRGLEKDVQTLTDNSIKEVDKIAADKE 179

Query: 181 KEIMHF 186
           KE++  
Sbjct: 180 KELLEV 185


>gi|18412657|ref|NP_567141.1| RRF (RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR) [Arabidopsis
           thaliana]
 gi|22001953|sp|Q9M1X0|RRFC_ARATH RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
 gi|13926252|gb|AAK49599.1|AF372883_1 AT3g63190/F16M2_40 [Arabidopsis thaliana]
 gi|15982709|gb|AAL09724.1| AT3g63190/F16M2_40 [Arabidopsis thaliana]
 gi|20260166|gb|AAM12981.1| putative protein [Arabidopsis thaliana]
 gi|27363350|gb|AAO11594.1| At3g63190/F16M2_40 [Arabidopsis thaliana]
 gi|332646925|gb|AEE80446.1| ribosome-recycling factor [Arabidopsis thaliana]
          Length = 275

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/178 (36%), Positives = 109/178 (61%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K +M  TI  L+    ++RTGR + +MLD ++VE YGS V L  +A ++  +   L++
Sbjct: 98  DVKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLL 157

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +DK  + ++E+ I  S+LG+ P  +G V+R+ +P  T +RR  L KV    +E+ K++
Sbjct: 158 QPYDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVA 217

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRRD +    K  K  K SED V  L +D+QK+ D  +K I+  +++K+KE+M  
Sbjct: 218 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEKELMKV 275


>gi|304388991|ref|ZP_07371038.1| ribosome recycling factor [Neisseria meningitidis ATCC 13091]
 gi|304337125|gb|EFM03312.1| ribosome recycling factor [Neisseria meningitidis ATCC 13091]
          Length = 203

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 117/186 (62%), Gaps = 1/186 (0%)

Query: 2   NQVIDLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           N + D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+
Sbjct: 18  NMINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTL 77

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV   
Sbjct: 78  LDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRG 137

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K+
Sbjct: 138 EAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKE 197

Query: 181 KEIMHF 186
           +++M  
Sbjct: 198 EDLMAI 203


>gi|289550950|ref|YP_003471854.1| Ribosome recycling factor [Staphylococcus lugdunensis HKU09-01]
 gi|315658452|ref|ZP_07911324.1| ribosome recycling factor [Staphylococcus lugdunensis M23590]
 gi|289180482|gb|ADC87727.1| Ribosome recycling factor [Staphylococcus lugdunensis HKU09-01]
 gi|315496781|gb|EFU85104.1| ribosome recycling factor [Staphylococcus lugdunensis M23590]
          Length = 184

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 118/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  +I  ++ K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MADII--KDTKARMNKSIENLSRELANINAGRANSNLLNGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  V  +ER I  +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKTSVKDIERAIIAANLGVNPTSDGEVIRITVPALTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RNIRRD  D LKK  K+G  +ED + S  +D+QK TD +IK ID    +K+
Sbjct: 119 VGEDAKVSIRNIRRDINDQLKKDEKNGDITEDDLRSQSDDVQKATDDSIKEIDQLVGDKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|153207713|ref|ZP_01946360.1| ribosome recycling factor [Coxiella burnetii 'MSU Goat Q177']
 gi|154705951|ref|YP_001424018.1| ribosome recycling factor [Coxiella burnetii Dugway 5J108-111]
 gi|165919005|ref|ZP_02219091.1| ribosome recycling factor [Coxiella burnetii RSA 334]
 gi|212212246|ref|YP_002303182.1| ribosome recycling factor [Coxiella burnetii CbuG_Q212]
 gi|212218981|ref|YP_002305768.1| ribosome recycling factor [Coxiella burnetii CbuK_Q154]
 gi|189044052|sp|A9KBR6|RRF_COXBN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749925|sp|B6J8M4|RRF_COXB1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749926|sp|B6IZA9|RRF_COXB2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|120576409|gb|EAX33033.1| ribosome recycling factor [Coxiella burnetii 'MSU Goat Q177']
 gi|154355237|gb|ABS76699.1| ribosome recycling factor [Coxiella burnetii Dugway 5J108-111]
 gi|165917330|gb|EDR35934.1| ribosome recycling factor [Coxiella burnetii RSA 334]
 gi|212010656|gb|ACJ18037.1| ribosome Recycling Factor (RRF) [Coxiella burnetii CbuG_Q212]
 gi|212013243|gb|ACJ20623.1| ribosome recycling factor [Coxiella burnetii CbuK_Q154]
          Length = 185

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/186 (38%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N +I+  + K RM  ++  LK ++  LRTGR  PS+L+ +KV+ Y    PL+QVA++ +
Sbjct: 2   INDIIN--DSKSRMEKSLGSLKTELAKLRTGRAHPSLLEHIKVDYYNVETPLSQVASIAI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
             PR L ++ W+K MV  +E+ I +++LGLNP   G V+R+P+P  TEERR  L +V   
Sbjct: 60  ENPRTLSITPWEKNMVGPIEKAIQKADLGLNPATVGMVIRVPLPPLTEERRKELARVVRE 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE +++++RNIRR+  + LK+  K  + SED     +  IQK+TD+ I  +D    +K+
Sbjct: 120 EAEHARVAIRNIRREANNDLKELMKEKEISEDEERRAQTAIQKLTDAQIAEVDKMASQKE 179

Query: 181 KEIMHF 186
            ++M  
Sbjct: 180 ADLMAV 185


>gi|312829653|emb|CBX34495.1| ribosome recycling factor [Staphylococcus aureus subsp. aureus
           ECT-R 2]
          Length = 184

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 118/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I+    K RM  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A++ V
Sbjct: 1   MSDIIN--ETKSRMQKSIESLSRELANISAGRANSNLLNGVTVDYYGAPTPVQQLASINV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  VA +E+ I  +NLG+NP   G+V+RI VP  TEERR   VK    
Sbjct: 59  PEARLLVISPYDKTSVADIEKAIIAANLGVNPTSNGEVIRIAVPALTEERRKERVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++K+SVRNIRRD  D LKK  K+G  +ED + S   D+QK TD++IK ID    +K+
Sbjct: 119 IGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQMIADKE 178

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 179 KDIMSV 184


>gi|312864198|ref|ZP_07724432.1| ribosome recycling factor [Streptococcus vestibularis F0396]
 gi|322517322|ref|ZP_08070197.1| ribosome recycling factor [Streptococcus vestibularis ATCC 49124]
 gi|311100199|gb|EFQ58408.1| ribosome recycling factor [Streptococcus vestibularis F0396]
 gi|322124019|gb|EFX95572.1| ribosome recycling factor [Streptococcus vestibularis ATCC 49124]
          Length = 185

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++   +R GR + S+LD + VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFAHSHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKGSIADIERAINESDLGINPANDGSVVRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K  + +ED + +LE DIQK TD  +K IDS   EK+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKDKEITEDQLKALEKDIQKATDDAVKKIDSMTAEKEKELLTV 185


>gi|257439607|ref|ZP_05615362.1| ribosome recycling factor [Faecalibacterium prausnitzii A2-165]
 gi|257197974|gb|EEU96258.1| ribosome recycling factor [Faecalibacterium prausnitzii A2-165]
          Length = 184

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/181 (38%), Positives = 118/181 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           + +  +++M  ++  L +++  +R GR +P++LD V V+ YG+  P+ QVA+V V E R 
Sbjct: 4   NTKAFEEKMKSSVEHLDRELAAVRAGRANPAVLDKVSVDYYGAPTPIQQVASVAVSEART 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L ++ WD+ ++ ++ + I  S++G+ PI +G  +R+  P  TEERR  L K      E++
Sbjct: 64  LTITPWDRTLLRAISKAIMASDVGITPIDDGSTIRLNFPAPTEERRKQLAKEVAKLGEEA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K++VRN+RRD MD  K  +K+G+ +ED   ++E ++QK+TD  IKNID+  EEK+KEIM 
Sbjct: 124 KVAVRNVRRDAMDKAKAMKKAGELTEDTQKTMEEEVQKLTDKYIKNIDAAVEEKQKEIMS 183

Query: 186 F 186
            
Sbjct: 184 V 184


>gi|255263510|ref|ZP_05342852.1| ribosome recycling factor [Thalassiobium sp. R2A62]
 gi|255105845|gb|EET48519.1| ribosome recycling factor [Thalassiobium sp. R2A62]
          Length = 187

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 85/182 (46%), Positives = 122/182 (67%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  ++  RM   ++ L+ +  +LRTGR S SML+ V V+AYG+  P+NQV  V V EPR
Sbjct: 7   IDTDDLTRRMDGAMANLRTEFASLRTGRASGSMLEPVMVDAYGTMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA +YAE 
Sbjct: 67  MVTINVWDKGLVNKVEKAIRESGLGINPQMNGTIIMLPIPELNEERRRELTKVAASYAEN 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++SVRN+RRDGM  +KK + +G   ED     E ++Q++TDS IK +D   E K++EIM
Sbjct: 127 ARVSVRNVRRDGMVQIKKGKAAG-MPEDDQKLWETEVQELTDSFIKQVDGALETKQEEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|254449718|ref|ZP_05063155.1| ribosome recycling factor [Octadecabacter antarcticus 238]
 gi|198264124|gb|EDY88394.1| ribosome recycling factor [Octadecabacter antarcticus 238]
          Length = 187

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 83/185 (44%), Positives = 121/185 (65%), Gaps = 1/185 (0%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++D  ++  RM   I+ L+ +  +LRTGR S S+L+ + V+AYGS  P+NQV  V V 
Sbjct: 4   DFILDTDDLTRRMDGAIANLRVEFASLRTGRASASILEPIMVDAYGSQTPINQVGTVNVP 63

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E RM+ V+VWDK +V+ VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y
Sbjct: 64  ESRMVTVNVWDKGLVSKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRTQLTKVAGTY 123

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE  ++S+RN+RRDGMD +KK++  G  SED     E  +Q++T+  IK +D   E K+ 
Sbjct: 124 AENGRVSIRNVRRDGMDQVKKAKNDG-MSEDDQKFWEGAVQEMTNDYIKRVDDQLEIKQA 182

Query: 182 EIMHF 186
           EIM  
Sbjct: 183 EIMQV 187


>gi|329893773|ref|ZP_08269861.1| Ribosome recycling factor [gamma proteobacterium IMCC3088]
 gi|328923496|gb|EGG30810.1| Ribosome recycling factor [gamma proteobacterium IMCC3088]
          Length = 185

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + RM  +I  L  +   +RTGR  PS+LD +KVE YGS  PLNQVAN+ + + R L 
Sbjct: 7   EEAQARMQKSIEALGHNFNKIRTGRAHPSLLDGIKVEYYGSDTPLNQVANINIEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           + VWD+ M+++VE+ I +S+LGLNP   G+V+RIP+P  TEE R   +K A A AE +++
Sbjct: 67  LQVWDRTMISAVEKAIMKSDLGLNPSSAGEVIRIPMPMLTEETRKGYIKQARAEAEAARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN RRD M  LK   K  + SED     ++++QK+TD  +K +D     K+ ++M  
Sbjct: 127 SLRNARRDAMSMLKDLVKEKEISEDDERRGQDEVQKLTDKMVKKVDELLAAKEADLMEI 185


>gi|325267098|ref|ZP_08133767.1| ribosome recycling factor [Kingella denitrificans ATCC 33394]
 gi|324981451|gb|EGC17094.1| ribosome recycling factor [Kingella denitrificans ATCC 33394]
          Length = 185

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +++M  ++  L++++  +RTGR    +LD V VE +GS VP++QV NVT+L+ R + 
Sbjct: 7   KTAENKMQRSLEVLRENLAKVRTGRAHTGLLDQVTVEYWGSEVPVSQVGNVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A +E+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE  ++
Sbjct: 67  VKPFESNMAAKIEKAIRDSNLGLNPSSVGDLIRVPMPMLTEERRKDLIKVVRGEAEDGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I ++D     K++++M  
Sbjct: 127 SIRNVRRDANDHVKKLLKDKEISEDEARRAEESVQKLTDKYIADVDKMLAAKEEDLMAI 185


>gi|225858740|ref|YP_002740250.1| ribosome recycling factor [Streptococcus pneumoniae 70585]
 gi|289167793|ref|YP_003446062.1| ribosome recycling factor [Streptococcus mitis B6]
 gi|307704917|ref|ZP_07641808.1| ribosome recycling factor [Streptococcus mitis SK597]
 gi|307706446|ref|ZP_07643255.1| ribosome recycling factor [Streptococcus mitis SK321]
 gi|307708583|ref|ZP_07645047.1| ribosome recycling factor [Streptococcus mitis NCTC 12261]
 gi|307709131|ref|ZP_07645590.1| ribosome recycling factor [Streptococcus mitis SK564]
 gi|322376444|ref|ZP_08050937.1| ribosome recycling factor [Streptococcus sp. M334]
 gi|254809532|sp|C1C6S4|RRF_STRP7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|225721445|gb|ACO17299.1| ribosome recycling factor [Streptococcus pneumoniae 70585]
 gi|288907360|emb|CBJ22197.1| ribosome recycling factor [Streptococcus mitis B6]
 gi|301801786|emb|CBW34497.1| ribosome recycling factor [Streptococcus pneumoniae INV200]
 gi|307615332|gb|EFN94541.1| ribosome recycling factor [Streptococcus mitis NCTC 12261]
 gi|307618156|gb|EFN97314.1| ribosome recycling factor [Streptococcus mitis SK321]
 gi|307620077|gb|EFN99194.1| ribosome recycling factor [Streptococcus mitis SK564]
 gi|307621531|gb|EFO00577.1| ribosome recycling factor [Streptococcus mitis SK597]
 gi|321282251|gb|EFX59258.1| ribosome recycling factor [Streptococcus sp. M334]
          Length = 185

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLEV 185


>gi|293365195|ref|ZP_06611912.1| ribosome recycling factor [Streptococcus oralis ATCC 35037]
 gi|307703733|ref|ZP_07640674.1| ribosome recycling factor [Streptococcus oralis ATCC 35037]
 gi|291316645|gb|EFE57081.1| ribosome recycling factor [Streptococcus oralis ATCC 35037]
 gi|307622568|gb|EFO01564.1| ribosome recycling factor [Streptococcus oralis ATCC 35037]
          Length = 185

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D+  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDRSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLEV 185


>gi|226945938|ref|YP_002801011.1| ribosome recycling factor [Azotobacter vinelandii DJ]
 gi|259494533|sp|C1DSU3|RRF_AZOVD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226720865|gb|ACO80036.1| ribosome recycling factor [Azotobacter vinelandii DJ]
          Length = 185

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L+     +RTGR  PS+LD V V  YG+  PL QVANV   + R L 
Sbjct: 7   KDAQARMKKSLESLEHAFAKIRTGRAHPSILDGVMVSYYGADTPLRQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK M+ +VE+ I  S+LGLNP   G  +R+P+P  TEE R    + A A AE +++
Sbjct: 67  LTVFDKSMIQAVEKAIMTSDLGLNPATAGTTIRVPMPALTEETRKGYTRQARAEAESARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LK   K  + SED      +++QK+TD  I  +D   E K+ ++M  
Sbjct: 127 AVRNIRRDALAQLKDLVKEKEISEDEERRAADEVQKLTDKAIAEVDKALEAKEADLMAV 185


>gi|325105870|ref|YP_004275524.1| ribosome recycling factor [Pedobacter saltans DSM 12145]
 gi|324974718|gb|ADY53702.1| ribosome recycling factor [Pedobacter saltans DSM 12145]
          Length = 187

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 86/188 (45%), Positives = 116/188 (61%), Gaps = 3/188 (1%)

Query: 1   MNQVI--DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I  +L+  K  M   I+    ++M +R G+ SPSMLD V VE YGS  PL QVAN+
Sbjct: 1   MNEFIKLELEEAKATMQKAITHTDNELMKIRAGKASPSMLDGVLVEYYGSPTPLAQVANI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R +VV  W+K M+  +E+GI  SN GLNP  +G V+R+ VP  TEERR  LVK A
Sbjct: 61  NTPDARTIVVQPWEKSMIGPIEKGILNSNCGLNPQNDGSVVRLNVPPLTEERRKQLVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AE  KIS+RNIR++  + +KK +  G  SED + + E ++QKITD  I  ID   E 
Sbjct: 121 KEEAEAGKISIRNIRKNTNESIKKLKSEG-VSEDEIKAGEAEVQKITDGFIAKIDVMIEG 179

Query: 179 KKKEIMHF 186
           K+K+IM  
Sbjct: 180 KEKDIMTV 187


>gi|28198252|ref|NP_778566.1| ribosome recycling factor [Xylella fastidiosa Temecula1]
 gi|32129996|sp|Q87EH6|RRF_XYLFT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|28056322|gb|AAO28215.1| ribosome recycling factor [Xylella fastidiosa Temecula1]
 gi|307579357|gb|ADN63326.1| ribosome recycling factor [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 185

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 122/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ +DRM  +I  L+  + ++RTGR SPS+LD +K++AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQDRMTKSIDALRNSLASVRTGRASPSLLDGIKIKAYGTDTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK M   VE+ I+ S+LGL P V G ++R+ +P  TEERR  L KV H+  E +K+
Sbjct: 67  ITVFDKNMSKDVEKAIYASDLGLTPTVVGTLIRLNLPPLTEERRKELTKVVHSEGEDTKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   KS + +ED V   E DIQK+TD  IK++D   + K++E+M  
Sbjct: 127 AIRNIRRDANQQIKDMLKSKEITEDEVRHGEEDIQKLTDKAIKSVDEVVKSKEQELMTV 185


>gi|227510244|ref|ZP_03940293.1| ribosome recycling factor [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227513173|ref|ZP_03943222.1| ribosome recycling factor [Lactobacillus buchneri ATCC 11577]
 gi|227083554|gb|EEI18866.1| ribosome recycling factor [Lactobacillus buchneri ATCC 11577]
 gi|227189896|gb|EEI69963.1| ribosome recycling factor [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 187

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K +M      L+ ++ ++R GR + S+L  V V+ YG+  PLNQ+A++++ E R++
Sbjct: 8   LNEAKTKMKKAQEVLEHELGSIRAGRANASLLSGVTVDYYGAPTPLNQIASISIPEARVI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + ++E+GI+E++LGL+P  +G  +R+ +P  TEERR  + K   A  EKSK
Sbjct: 68  LITPYDKSSLDNIEKGIYEADLGLSPANDGTAIRLAIPALTEERRKEVAKQVKATGEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD  K+  KS + ++D +  LE+ +QK+TD++IK++D    +K+ E+M+
Sbjct: 128 VAVRNVRREAMDTFKRGNKSEEITDDELHRLEDQVQKLTDNSIKSVDKIVADKENEVMN 186


>gi|33239972|ref|NP_874914.1| ribosome recycling factor [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|39932093|sp|Q7VD62|RRF_PROMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33237498|gb|AAP99566.1| Ribosome recycling factor [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 182

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/179 (36%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q ++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + L 
Sbjct: 4   QEVELNMQKSVEACQRNFNTIRTGRANTSLLDRLTVEYYGADTPLKSLATISTPDSQTLA 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +  +E+ I  S+LG  P  +G+++RI +P  TEERR    K+A  YAE++KI
Sbjct: 64  IQPFDLGSLGLIEKAISISDLGFTPNNDGKIIRINIPPLTEERRKQFCKLASKYAEEAKI 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD ++ +K S K G+ SED     ++ IQKIT+  I  I+     K++EI+  
Sbjct: 124 SLRNIRRDAIEKIKGSEKDGEFSEDQSRDQQDSIQKITNKYINEIEKNLSGKEEEILKV 182


>gi|254805769|ref|YP_003083990.1| Ribosome recycling factor [Neisseria meningitidis alpha14]
 gi|254669311|emb|CBA08313.1| Ribosome recycling factor [Neisseria meningitidis alpha14]
 gi|316985712|gb|EFV64658.1| ribosome recycling factor [Neisseria meningitidis H44/76]
          Length = 208

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 117/186 (62%), Gaps = 1/186 (0%)

Query: 2   NQVIDLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           N + D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+
Sbjct: 23  NMINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTL 82

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV   
Sbjct: 83  LDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRG 142

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K+
Sbjct: 143 EAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKE 202

Query: 181 KEIMHF 186
           +++M  
Sbjct: 203 EDLMAI 208


>gi|301794085|emb|CBW36491.1| ribosome recycling factor [Streptococcus pneumoniae INV104]
 gi|332204947|gb|EGJ19012.1| ribosome recycling factor [Streptococcus pneumoniae GA47901]
          Length = 185

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ VP  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVVPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLEV 185


>gi|294677163|ref|YP_003577778.1| ribosome recycling factor [Rhodobacter capsulatus SB 1003]
 gi|294475983|gb|ADE85371.1| ribosome recycling factor [Rhodobacter capsulatus SB 1003]
          Length = 187

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 84/182 (46%), Positives = 121/182 (66%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  +++ RM   +  LK +  TLRTGR S SM++ + V+AYGS VP+NQV  + V EPR
Sbjct: 7   IDTDDLERRMEGAMHALKHEFGTLRTGRASASMVEPIMVDAYGSLVPINQVGTINVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ V+VWDK M+  VE+ I +S LG+NP   G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 67  MVTVNVWDKGMINKVEKAIRDSGLGINPQTNGPIIMLPIPELNEERRRELTKVAAQYAEH 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++ +G  SED     E +I+++T   I  +D   E K+ EIM
Sbjct: 127 ARVAIRNVRRDGMDQIKKAKANG-MSEDDQKFWEGEIEELTKKHIGLVDKALEGKQAEIM 185

Query: 185 HF 186
           H 
Sbjct: 186 HV 187


>gi|312898662|ref|ZP_07758052.1| ribosome recycling factor [Megasphaera micronuciformis F0359]
 gi|310620581|gb|EFQ04151.1| ribosome recycling factor [Megasphaera micronuciformis F0359]
          Length = 186

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + +   TI   K+++ ++RTGR S S+LD V V+ YG+  P+NQVANV+  EPR++
Sbjct: 7   LNECEAKADKTIENFKRNLSSIRTGRASTSLLDRVSVDYYGTPTPVNQVANVSAPEPRLI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S W++ M+  +E+ I +S+LGLNP  +G ++R+ +P+ TEERR  L K     AE +K
Sbjct: 67  TISPWERTMLGEIEKAILKSDLGLNPNNDGTIIRLEIPQLTEERRKELSKKVGKEAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D +KKS K  + +ED     +  IQKITD+ IK ID   ++K+KE+M  
Sbjct: 127 VAVRNIRRDSNDAVKKSEKKKEITEDDSKEAQTKIQKITDAKIKQIDEIKDKKEKEVMEV 186


>gi|307111396|gb|EFN59630.1| hypothetical protein CHLNCDRAFT_29191 [Chlorella variabilis]
          Length = 255

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 8/187 (4%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++  ++M  ++  +K+   T+RTGR + +MLD ++ + YG+  PL  VA+V+  E  +LV
Sbjct: 69  EDTMEKMEKSVESVKRSFGTVRTGRANAAMLDRIEFDYYGAMTPLRTVASVSTPESTLLV 128

Query: 68  VS--------VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           +          +D   + ++ER I +S+LGL P  +G+V+R+ VP+ T ERR  +VK+  
Sbjct: 129 IQARALLAAAPYDTSAIPAIERAIMQSDLGLTPNNDGRVIRLQVPQLTAERRKEMVKIVS 188

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E+ K++VRN+RRD M  ++K  K G  SED    LEN +QK+TD  +K I+   + K
Sbjct: 189 KLGEEGKVAVRNVRRDAMKAIEKLEKDGGISEDQRKDLENAVQKLTDEYVKEIEGLAKSK 248

Query: 180 KKEIMHF 186
             E+   
Sbjct: 249 SDELTKV 255


>gi|306819855|ref|ZP_07453509.1| ribosome recycling factor [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304552102|gb|EFM40039.1| ribosome recycling factor [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 185

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q   ++M  TIS LK+D+ T+RTGR +P MLD + V+ YG+  P+ Q+A ++  +PR L 
Sbjct: 7   QTTNEKMEKTISVLKEDLNTIRTGRANPKMLDKLTVDYYGTVTPVKQIAAISSPDPRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +  +E+ I  ++LG+NP  +G ++RI +P+ TEERR  LVK A    E++K+
Sbjct: 67  IQPWDKSSLHLIEKAIQVADLGVNPTNDGLIIRISIPQLTEERRKELVKQAQKMGEQAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D +KK  K G  +ED      +DIQK+TD  IK ID     K+K+I   
Sbjct: 127 AIRNLRRDANDLIKKGEKDGSIAEDEAKKELDDIQKLTDEHIKAIDGVIANKEKDIKEI 185


>gi|256832239|ref|YP_003160966.1| ribosome recycling factor [Jonesia denitrificans DSM 20603]
 gi|256685770|gb|ACV08663.1| ribosome recycling factor [Jonesia denitrificans DSM 20603]
          Length = 185

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/186 (32%), Positives = 108/186 (58%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+  I L   +++M   +   K++   +RTGR + +M   + V+ YG+  PL Q+A++ +
Sbjct: 1   MSDEI-LLEAEEKMDRAVEVAKEEFAAIRTGRANAAMFSKITVDYYGAPTPLQQLASMNI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R +++S +DK  ++ +E+ + +S+LG+NP  +G  +RI +P  TEERR   VK+A  
Sbjct: 60  PEARTVLISPYDKSAMSLIEKALRDSDLGVNPSNDGNAIRINLPALTEERRRDYVKLAKN 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ ++SVRNIRR   D L +  K G+ SED     E +++ +T   +  ID+    K+
Sbjct: 120 KGEEGRVSVRNIRRKAKDQLDRLVKDGELSEDEGTRAEKELEALTRRHVDEIDTLLAGKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 AELLEV 185


>gi|119487064|ref|ZP_01620936.1| ribosome releasing factor [Lyngbya sp. PCC 8106]
 gi|119455993|gb|EAW37127.1| ribosome releasing factor [Lyngbya sp. PCC 8106]
          Length = 182

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/177 (36%), Positives = 104/177 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++  M   +   ++   T+RTGR + S+LD V VE YG+   L  +A +   +   +
Sbjct: 3   LAEVESLMQKAVESTQRSFNTIRTGRANTSLLDRVMVEYYGTPTSLKSLATINTPDSSTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D++ +  +E+ I  S++GL P  +G ++R+ +P  T ERR   VK+A  YAE+ K
Sbjct: 63  MIQPFDRKTLDIIEKAISLSDVGLTPNNDGSIIRLNIPPLTSERRQEFVKLASKYAEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +SVRN+RRD +D ++K  KS   SED    L++ IQK+TD     ID  FE K K+I
Sbjct: 123 VSVRNVRRDAVDSVRKQEKSKDLSEDEARDLQDQIQKLTDKYTAKIDEMFEAKDKDI 179


>gi|254819038|ref|ZP_05224039.1| ribosome recycling factor [Mycobacterium intracellulare ATCC 13950]
          Length = 185

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D+ T+RTGR +P M   + ++ YG+  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRIVIDYYGAATPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   V ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A +  E +K
Sbjct: 66  VIKPYEASQVGAIETAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + RK G+A ED V   E D+ K T      I+   + K+ E++  
Sbjct: 126 VSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDKTTHQYTTQIEELVKHKEGELLEV 185


>gi|108798972|ref|YP_639169.1| ribosome recycling factor [Mycobacterium sp. MCS]
 gi|119868087|ref|YP_938039.1| ribosome recycling factor [Mycobacterium sp. KMS]
 gi|126434572|ref|YP_001070263.1| ribosome recycling factor [Mycobacterium sp. JLS]
 gi|123070322|sp|Q1BAH1|RRF_MYCSS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230802|sp|A3PXZ5|RRF_MYCSJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230803|sp|A1UEJ1|RRF_MYCSK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|108769391|gb|ABG08113.1| ribosome recycling factor [Mycobacterium sp. MCS]
 gi|119694176|gb|ABL91249.1| ribosome recycling factor [Mycobacterium sp. KMS]
 gi|126234372|gb|ABN97772.1| ribosome recycling factor [Mycobacterium sp. JLS]
          Length = 185

 Score =  231 bits (591), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  + D+ ++RTGR +P M   + V+ YG+  P+ Q++++ V E RM+
Sbjct: 6   LFDAEEKMEKAVSVARDDLSSIRTGRANPGMFSRINVDYYGATTPITQLSSINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ +P+ TEERR  LVK A A  E +K
Sbjct: 66  VIKPYEANQLRNIEDAIRNSDLGVNPTNDGNIIRVSIPQLTEERRRDLVKQAKAKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + +K G+A ED V+  E D+ K T +    ID   + K+ E++  
Sbjct: 126 VSVRNIRRKAMEELARIKKDGEAGEDEVSRAEKDLDKTTHTYTHQIDELVKHKEGELLEV 185


>gi|213964585|ref|ZP_03392785.1| ribosome recycling factor [Corynebacterium amycolatum SK46]
 gi|213952778|gb|EEB64160.1| ribosome recycling factor [Corynebacterium amycolatum SK46]
          Length = 185

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++ G ++   ++++  +RTGR +P+M + V  E YG   P+ Q+A ++V EPRML
Sbjct: 6   LLDCEEKYGSSVEHCREELTHIRTGRANPAMFNGVIAEYYGVPTPITQMATISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++  ++  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VKV+ +  E +K
Sbjct: 66  LIKPYELSVMGDIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRREMVKVSRSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RR GM+ LKK +K G A ED V + E ++ ++T + ++ +DS  E K+ E+M  
Sbjct: 126 IAIRNVRRKGMETLKKIQKDGDAGEDEVQAGEKELDQVTKNYVEQVDSLVERKEAELMEV 185


>gi|270292949|ref|ZP_06199160.1| ribosome recycling factor [Streptococcus sp. M143]
 gi|270278928|gb|EFA24774.1| ribosome recycling factor [Streptococcus sp. M143]
          Length = 185

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLEV 185


>gi|115472897|ref|NP_001060047.1| Os07g0570700 [Oryza sativa Japonica Group]
 gi|158513666|sp|A2YMU2|RRFC_ORYSI RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=Protein OsL8; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
 gi|158513703|sp|A3BLC3|RRFC_ORYSJ RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=Protein OsL8; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
 gi|34394208|dbj|BAC84660.1| putative Ribosome recycling factor, chloroplast precursor [Oryza
           sativa Japonica Group]
 gi|113611583|dbj|BAF21961.1| Os07g0570700 [Oryza sativa Japonica Group]
 gi|218199871|gb|EEC82298.1| hypothetical protein OsI_26546 [Oryza sativa Indica Group]
 gi|222637311|gb|EEE67443.1| hypothetical protein OsJ_24808 [Oryza sativa Japonica Group]
          Length = 266

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 65/179 (36%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              ++RM   I  ++ +  T+RTGR +P+MLD ++VE YG+ V L  +A +   +   L+
Sbjct: 88  DQARERMEKAIETVQNNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQINTPDATSLL 147

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK  +  +E+ I  +NLG+ P  +G+V+R+ VP  T +RR  L K     AE+ K+
Sbjct: 148 IQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELAKTVAKLAEEGKV 207

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +    K  K  K SED V  L  D+QK+TD  +K I++  ++K++E+M  
Sbjct: 208 AIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIEAIQKQKEQELMKI 266


>gi|15610019|ref|NP_217398.1| ribosome recycling factor [Mycobacterium tuberculosis H37Rv]
 gi|15842423|ref|NP_337460.1| ribosome recycling factor [Mycobacterium tuberculosis CDC1551]
 gi|31794058|ref|NP_856551.1| ribosome recycling factor [Mycobacterium bovis AF2122/97]
 gi|148662726|ref|YP_001284249.1| ribosome recycling factor [Mycobacterium tuberculosis H37Ra]
 gi|148824071|ref|YP_001288825.1| ribosome recycling factor [Mycobacterium tuberculosis F11]
 gi|167969509|ref|ZP_02551786.1| ribosome recycling factor [Mycobacterium tuberculosis H37Ra]
 gi|215404856|ref|ZP_03417037.1| ribosome recycling factor [Mycobacterium tuberculosis 02_1987]
 gi|215412723|ref|ZP_03421435.1| ribosome recycling factor [Mycobacterium tuberculosis 94_M4241A]
 gi|215428323|ref|ZP_03426242.1| ribosome recycling factor [Mycobacterium tuberculosis T92]
 gi|215431829|ref|ZP_03429748.1| ribosome recycling factor [Mycobacterium tuberculosis EAS054]
 gi|215447144|ref|ZP_03433896.1| ribosome recycling factor [Mycobacterium tuberculosis T85]
 gi|218754634|ref|ZP_03533430.1| ribosome recycling factor [Mycobacterium tuberculosis GM 1503]
 gi|219558903|ref|ZP_03537979.1| ribosome recycling factor [Mycobacterium tuberculosis T17]
 gi|253798030|ref|YP_003031031.1| ribosome recycling factor frr [Mycobacterium tuberculosis KZN 1435]
 gi|254232977|ref|ZP_04926304.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis C]
 gi|254365523|ref|ZP_04981568.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254551951|ref|ZP_05142398.1| ribosome recycling factor [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187900|ref|ZP_05765374.1| ribosome recycling factor [Mycobacterium tuberculosis CPHL_A]
 gi|260202016|ref|ZP_05769507.1| ribosome recycling factor [Mycobacterium tuberculosis T46]
 gi|260206197|ref|ZP_05773688.1| ribosome recycling factor [Mycobacterium tuberculosis K85]
 gi|289444437|ref|ZP_06434181.1| ribosome recycling factor [Mycobacterium tuberculosis T46]
 gi|289448548|ref|ZP_06438292.1| ribosome recycling factor frr [Mycobacterium tuberculosis CPHL_A]
 gi|289553329|ref|ZP_06442539.1| ribosome recycling factor frr [Mycobacterium tuberculosis KZN 605]
 gi|289571072|ref|ZP_06451299.1| ribosome recycling factor frr [Mycobacterium tuberculosis T17]
 gi|289575587|ref|ZP_06455814.1| ribosome recycling factor frr [Mycobacterium tuberculosis K85]
 gi|289746681|ref|ZP_06506059.1| ribosome recycling factor frr [Mycobacterium tuberculosis 02_1987]
 gi|289751547|ref|ZP_06510925.1| ribosome recycling factor frr [Mycobacterium tuberculosis T92]
 gi|289754994|ref|ZP_06514372.1| ribosome recycling factor frr [Mycobacterium tuberculosis EAS054]
 gi|289759003|ref|ZP_06518381.1| ribosome releasing factor [Mycobacterium tuberculosis T85]
 gi|289763059|ref|ZP_06522437.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis GM 1503]
 gi|294994025|ref|ZP_06799716.1| ribosome recycling factor [Mycobacterium tuberculosis 210]
 gi|297635498|ref|ZP_06953278.1| ribosome recycling factor [Mycobacterium tuberculosis KZN 4207]
 gi|297732497|ref|ZP_06961615.1| ribosome recycling factor [Mycobacterium tuberculosis KZN R506]
 gi|298526351|ref|ZP_07013760.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis 94_M4241A]
 gi|306777168|ref|ZP_07415505.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu001]
 gi|306781075|ref|ZP_07419412.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu002]
 gi|306785714|ref|ZP_07424036.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu003]
 gi|306789754|ref|ZP_07428076.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu004]
 gi|306794568|ref|ZP_07432870.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu005]
 gi|306798809|ref|ZP_07437111.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu006]
 gi|306804656|ref|ZP_07441324.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu008]
 gi|306808849|ref|ZP_07445517.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu007]
 gi|306968949|ref|ZP_07481610.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu009]
 gi|306973285|ref|ZP_07485946.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu010]
 gi|307080993|ref|ZP_07490163.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu011]
 gi|307085590|ref|ZP_07494703.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu012]
 gi|313659830|ref|ZP_07816710.1| ribosome recycling factor [Mycobacterium tuberculosis KZN V2475]
 gi|54039295|sp|P66735|RRF_MYCBO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|54042003|sp|P66734|RRF_MYCTU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230804|sp|A5U6N7|RRF_MYCTA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|61680226|pdb|1WQF|A Chain A, Crystal Structure Of Ribosome Recycling Factor From
           Mycobacterium Tuberculosis
 gi|61680227|pdb|1WQG|A Chain A, Crystal Structure Of Ribosome Recycling Factor From
           Mycobacterium Tuberculosis
 gi|61680228|pdb|1WQH|A Chain A, Crystal Structure Of Ribosome Recycling Factor From
           Mycobacterium Tuberculosis
 gi|1403402|emb|CAA98358.1| RIBOSOME RECYCLING FACTOR FRR (RIBOSOME RELEASING FACTOR) (RRF)
           [Mycobacterium tuberculosis H37Rv]
 gi|13882725|gb|AAK47274.1| ribosome recycling factor [Mycobacterium tuberculosis CDC1551]
 gi|31619653|emb|CAD96593.1| RIBOSOME RECYCLING FACTOR FRR (RIBOSOME RELEASING FACTOR) (RRF)
           [Mycobacterium bovis AF2122/97]
 gi|124602036|gb|EAY61046.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis C]
 gi|134151036|gb|EBA43081.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148506878|gb|ABQ74687.1| ribosome releasing factor [Mycobacterium tuberculosis H37Ra]
 gi|148722598|gb|ABR07223.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis F11]
 gi|253319533|gb|ACT24136.1| ribosome recycling factor frr [Mycobacterium tuberculosis KZN 1435]
 gi|289417356|gb|EFD14596.1| ribosome recycling factor [Mycobacterium tuberculosis T46]
 gi|289421506|gb|EFD18707.1| ribosome recycling factor frr [Mycobacterium tuberculosis CPHL_A]
 gi|289437961|gb|EFD20454.1| ribosome recycling factor frr [Mycobacterium tuberculosis KZN 605]
 gi|289540018|gb|EFD44596.1| ribosome recycling factor frr [Mycobacterium tuberculosis K85]
 gi|289544826|gb|EFD48474.1| ribosome recycling factor frr [Mycobacterium tuberculosis T17]
 gi|289687209|gb|EFD54697.1| ribosome recycling factor frr [Mycobacterium tuberculosis 02_1987]
 gi|289692134|gb|EFD59563.1| ribosome recycling factor frr [Mycobacterium tuberculosis T92]
 gi|289695581|gb|EFD63010.1| ribosome recycling factor frr [Mycobacterium tuberculosis EAS054]
 gi|289710565|gb|EFD74581.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis GM 1503]
 gi|289714567|gb|EFD78579.1| ribosome releasing factor [Mycobacterium tuberculosis T85]
 gi|298496145|gb|EFI31439.1| ribosome recycling factor frr (ribosome releasing factor)
           [Mycobacterium tuberculosis 94_M4241A]
 gi|308214453|gb|EFO73852.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu001]
 gi|308326125|gb|EFP14976.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu002]
 gi|308329628|gb|EFP18479.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu003]
 gi|308333767|gb|EFP22618.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu004]
 gi|308337161|gb|EFP26012.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu005]
 gi|308340971|gb|EFP29822.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu006]
 gi|308344804|gb|EFP33655.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu007]
 gi|308348752|gb|EFP37603.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu008]
 gi|308353453|gb|EFP42304.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu009]
 gi|308357318|gb|EFP46169.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu010]
 gi|308361203|gb|EFP50054.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu011]
 gi|308364898|gb|EFP53749.1| ribosome recycling factor frr [Mycobacterium tuberculosis SUMu012]
 gi|323718492|gb|EGB27663.1| ribosome recycling factor frr [Mycobacterium tuberculosis CDC1551A]
 gi|326904497|gb|EGE51430.1| ribosome recycling factor frr [Mycobacterium tuberculosis W-148]
 gi|328457804|gb|AEB03227.1| ribosome recycling factor frr [Mycobacterium tuberculosis KZN 4207]
          Length = 185

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D+ T+RTGR +P M   + ++ YG+  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A    E++K
Sbjct: 66  VIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + RK G+A ED V   E D+ K T   +  ID   + K+ E++  
Sbjct: 126 VSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV 185


>gi|87123906|ref|ZP_01079756.1| ribosome recycling factor protein Rrf [Synechococcus sp. RS9917]
 gi|86168475|gb|EAQ69732.1| ribosome recycling factor protein Rrf [Synechococcus sp. RS9917]
          Length = 182

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 63/179 (35%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            +++  M  ++   ++   T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   NDLETSMQKSVESTQRMFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +A++E+ I  S LG  P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDLSALAAIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D +KK  K G+ SED     ++ +QK+TD  I  I++   +K+ +I+  
Sbjct: 124 ALRNIRRDAIDKVKKQEKEGEISEDQSRDEQDKVQKLTDRFIAAIETHLADKEADILKV 182


>gi|305681279|ref|ZP_07404086.1| ribosome recycling factor [Corynebacterium matruchotii ATCC 14266]
 gi|305659484|gb|EFM48984.1| ribosome recycling factor [Corynebacterium matruchotii ATCC 14266]
          Length = 185

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ M  T+   ++++ T+RTGR +P+M + V  + YG   P+ Q+A V+V E RM+
Sbjct: 6   LLECEEHMSTTVDRTREELTTIRTGRANPAMFNGVVADYYGVPTPITQMATVSVPEARMM 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++  M+  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A +  E  K
Sbjct: 66  LIKPYEMSMMGVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMVKLAKSKGEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RR GMD LKK  K G A ED V + E ++ K+T   +  +D   ++K+ E+M  
Sbjct: 126 IAIRNVRRKGMDQLKKIHKDGDAGEDEVQAAEKELDKVTQKYVAAVDEVVQKKEAELMEV 185


>gi|148238974|ref|YP_001224361.1| ribosome recycling factor [Synechococcus sp. WH 7803]
 gi|166231523|sp|A5GJE9|RRF_SYNPW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|147847513|emb|CAK23064.1| Ribosome recycling factor [Synechococcus sp. WH 7803]
          Length = 182

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 60/179 (33%), Positives = 104/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            +++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   SDLESSMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +A +E+ I  S LG  P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISALALIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +D +KK  K G+ SED     ++ +QK  D  I  ++     K+ +I+  
Sbjct: 124 ALRNLRRDAIDKIKKQEKEGEFSEDQSRDAQDSVQKTLDKFIAEVEQHLATKEADILKV 182


>gi|15837653|ref|NP_298341.1| ribosome recycling factor [Xylella fastidiosa 9a5c]
 gi|22001954|sp|Q9PEH7|RRF_XYLFA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|9105995|gb|AAF83861.1|AE003942_5 ribosome recycling factor [Xylella fastidiosa 9a5c]
          Length = 185

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 122/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ +DRM  +I  L+  + ++RTGR SPS+LD +K++AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDAQDRMTKSIDALRNSLASVRTGRASPSLLDGIKIKAYGTDTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK M   VE+ I+ S+LGL P V G ++R+ +P  TEERR  L KV H+  E +K+
Sbjct: 67  ITVFDKNMSKDVEKAIYASDLGLTPTVVGTLIRLNLPPLTEERRKELTKVVHSEGEDTKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   KS + +ED V   E DIQK+TD  IK++D   + K++E+M  
Sbjct: 127 AIRNIRRDANQQIKDMLKSKEITEDEVRQGEEDIQKLTDKAIKSVDEVVKSKEQELMTV 185


>gi|38234084|ref|NP_939851.1| ribosome recycling factor [Corynebacterium diphtheriae NCTC 13129]
 gi|47116991|sp|P61303|RRF_CORDI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|38200346|emb|CAE50032.1| ribosome recycling factor [Corynebacterium diphtheriae]
          Length = 185

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ M  ++   + +++ +RTGR +P+M + V  + YG   P+ Q+A ++V E RML
Sbjct: 6   LFEAEEHMNTSVERTRDELVNIRTGRANPAMFNGVIADYYGVPTPITQMATISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++  M+  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  + K+A +  E  K
Sbjct: 66  LIKPYEMSMMNEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMAKLAKSKGEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RR GMD LKK +K G A ED V + E ++ K+T   +  +D    +K+ E+M  
Sbjct: 126 IAIRNVRRKGMDQLKKIQKDGDAGEDEVQAAEKELDKVTAKYVAQVDEVVAKKEAELMEV 185


>gi|332967732|gb|EGK06839.1| ribosome recycling factor [Kingella kingae ATCC 23330]
          Length = 185

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +++M  ++  L  ++  +RTGR    +LD V VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAENKMQRSLEVLGDNLSKVRTGRAHTGLLDQVSVEYWGSEVPISQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M + +E+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE  ++
Sbjct: 67  VKPFESNMASKIEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEDGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I ++D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIADVDKMLAAKEEDLMAI 185


>gi|306829302|ref|ZP_07462492.1| ribosome recycling factor [Streptococcus mitis ATCC 6249]
 gi|315612956|ref|ZP_07887867.1| ribosome recycling factor [Streptococcus sanguinis ATCC 49296]
 gi|322374516|ref|ZP_08049030.1| ribosome recycling factor [Streptococcus sp. C300]
 gi|331266588|ref|YP_004326218.1| ribosome recycling factor [Streptococcus oralis Uo5]
 gi|304428388|gb|EFM31478.1| ribosome recycling factor [Streptococcus mitis ATCC 6249]
 gi|315315066|gb|EFU63107.1| ribosome recycling factor [Streptococcus sanguinis ATCC 49296]
 gi|321280016|gb|EFX57055.1| ribosome recycling factor [Streptococcus sp. C300]
 gi|326683260|emb|CBZ00878.1| ribosome recycling factor [Streptococcus oralis Uo5]
          Length = 185

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KEI+  
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKEILEV 185


>gi|221124412|ref|XP_002163993.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
 gi|260220938|emb|CBA29007.1| Ribosome-recycling factor [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 186

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + +  +M  +I+ LK ++  +RTGR +P++LD V V+ YGS VPL+QVAN+++++ R + 
Sbjct: 8   KTLDAKMDQSIASLKNNLTKIRTGRANPALLDTVHVDYYGSMVPLSQVANLSLIDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M   +E+ I +S+LGLNP   G+++R+P+P  TEERR  L KV     E +K+
Sbjct: 68  VQPWEKNMAPKIEKAIRDSDLGLNPSSMGELIRVPMPAMTEERRKELTKVVRGEGEGAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD  + +K+  K   ASED     E D+QK TD  I  ID     K+++IM  
Sbjct: 128 AVRNLRRDANEAVKRLVKDKLASEDDQKRCEADVQKTTDKHITEIDRLVASKEQDIMAV 186


>gi|124022470|ref|YP_001016777.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9303]
 gi|123962756|gb|ABM77512.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9303]
          Length = 173

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 63/173 (36%), Positives = 107/173 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   +++  T+RTGR +PS+LD + VE YG+  PL  +A ++  + + + +  +D 
Sbjct: 1   MHKSVEATQRNFATIRTGRANPSLLDRINVEYYGTETPLKSLATISTPDSQTIAIQPFDN 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E+ I  S+LGL P  +G+++RI VP  TEERR    K+A  YAE+ K+++RNIR
Sbjct: 61  GSMGLIEKAIATSDLGLTPNNDGKIIRINVPPLTEERRKEFCKLAAKYAEEGKVALRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD +D +KK  K  + S+D     ++ IQK+TD+ I  I+ +  EK+ +I+  
Sbjct: 121 RDAIDKVKKLEKDAELSKDQSHDEQDGIQKLTDTFITEIEKYLAEKEADILKV 173


>gi|15674582|ref|NP_268756.1| ribosome recycling factor [Streptococcus pyogenes M1 GAS]
 gi|21909863|ref|NP_664131.1| ribosome recycling factor [Streptococcus pyogenes MGAS315]
 gi|28896442|ref|NP_802792.1| ribosome recycling factor [Streptococcus pyogenes SSI-1]
 gi|50913751|ref|YP_059723.1| ribosome recycling factor [Streptococcus pyogenes MGAS10394]
 gi|71910193|ref|YP_281743.1| ribosome recycling factor [Streptococcus pyogenes MGAS5005]
 gi|94988011|ref|YP_596112.1| ribosome recycling factor [Streptococcus pyogenes MGAS9429]
 gi|94989890|ref|YP_597990.1| ribosome recycling factor [Streptococcus pyogenes MGAS10270]
 gi|94991895|ref|YP_599994.1| ribosome recycling factor [Streptococcus pyogenes MGAS2096]
 gi|94993775|ref|YP_601873.1| ribosome recycling factor [Streptococcus pyogenes MGAS10750]
 gi|139474297|ref|YP_001129013.1| ribosome recycling factor [Streptococcus pyogenes str. Manfredo]
 gi|209558949|ref|YP_002285421.1| ribosome recycling factor [Streptococcus pyogenes NZ131]
 gi|306827884|ref|ZP_07461152.1| ribosome recycling factor [Streptococcus pyogenes ATCC 10782]
 gi|57014111|sp|P68903|RRF_STRP1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|57014112|sp|P68904|RRF_STRP3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|57014114|sp|Q5XDH3|RRF_STRP6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231514|sp|Q1JD58|RRF_STRPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231515|sp|Q1JN31|RRF_STRPC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231516|sp|Q1JI77|RRF_STRPD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231517|sp|Q1J832|RRF_STRPF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231518|sp|A2RG30|RRF_STRPG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749943|sp|B5XK64|RRF_STRPZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|13621691|gb|AAK33477.1| putative ribosome recycling factor [Streptococcus pyogenes M1 GAS]
 gi|21904050|gb|AAM78934.1| putative ribosome recycling factor [Streptococcus pyogenes MGAS315]
 gi|28811693|dbj|BAC64625.1| putative ribosome recycling factor [Streptococcus pyogenes SSI-1]
 gi|50902825|gb|AAT86540.1| Ribosome Recycling Factor [Streptococcus pyogenes MGAS10394]
 gi|71852975|gb|AAZ50998.1| ribosome recycling factor [Streptococcus pyogenes MGAS5005]
 gi|94541519|gb|ABF31568.1| ribosome recycling factor (RRF) [Streptococcus pyogenes MGAS9429]
 gi|94543398|gb|ABF33446.1| Ribosome Recycling Factor (RRF) [Streptococcus pyogenes MGAS10270]
 gi|94545403|gb|ABF35450.1| Ribosome Recycling Factor (RRF) [Streptococcus pyogenes MGAS2096]
 gi|94547283|gb|ABF37329.1| Ribosome Recycling Factor (RRF) [Streptococcus pyogenes MGAS10750]
 gi|134272544|emb|CAM30809.1| ribosome recycling factor [Streptococcus pyogenes str. Manfredo]
 gi|209540150|gb|ACI60726.1| Ribosome recycling factor [Streptococcus pyogenes NZ131]
 gi|304429932|gb|EFM32973.1| ribosome recycling factor [Streptococcus pyogenes ATCC 10782]
          Length = 185

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  IK ID    EK+KE++  
Sbjct: 126 IAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEIDRMTAEKEKELLSV 185


>gi|288905833|ref|YP_003431055.1| ribosome recycling factor [Streptococcus gallolyticus UCN34]
 gi|306831922|ref|ZP_07465077.1| ribosome recycling factor [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|306834034|ref|ZP_07467155.1| ribosome recycling factor [Streptococcus bovis ATCC 700338]
 gi|325978868|ref|YP_004288584.1| ribosome-recycling factor [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732559|emb|CBI14131.1| ribosome recycling factor [Streptococcus gallolyticus UCN34]
 gi|304423822|gb|EFM26967.1| ribosome recycling factor [Streptococcus bovis ATCC 700338]
 gi|304425848|gb|EFM28965.1| ribosome recycling factor [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178796|emb|CBZ48840.1| Ribosome-recycling factor [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 185

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   + S L ++   +R GR + S+LD ++VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFEQSHSSLAREFAAIRAGRANASLLDRIQVEYYGAMTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +E  I+ S+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSLKDIEHAINASDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED +  LE DIQK TD  +K+ID+    K+KE++  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKVLEKDIQKATDEAVKHIDAMTANKEKELLEV 185


>gi|167770609|ref|ZP_02442662.1| hypothetical protein ANACOL_01955 [Anaerotruncus colihominis DSM
           17241]
 gi|167667204|gb|EDS11334.1| hypothetical protein ANACOL_01955 [Anaerotruncus colihominis DSM
           17241]
          Length = 184

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 111/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+   L++  ++M  TI  L+ +   +R GR +P++LD + V+ YG+   +  +A ++V
Sbjct: 1   MNER--LKHYNEKMEKTIRVLENEYSAIRAGRANPAVLDKITVDYYGTPTQIQAMAAISV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+  WDK  +  +E+ I  S++G+NP  +G V+RI  P  TEERR  + K    
Sbjct: 59  SEARILVIQPWDKSTLRPIEKAIQASDIGINPTNDGTVIRIVFPPLTEERRKEICKQIKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E SK+++R+IRRD  +  K  +KS + SED    LE+ +QK+TD   K ID    +K+
Sbjct: 119 QGEDSKVAIRSIRRDANEKFKALKKSSEVSEDEEKDLEDQMQKMTDKFCKRIDEIAAKKE 178

Query: 181 KEIMHF 186
           KEI+  
Sbjct: 179 KEILEI 184


>gi|251781912|ref|YP_002996214.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390541|dbj|BAH81000.1| ribosome releasing factor [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323126728|gb|ADX24025.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 185

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFAQSHHSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  IK ID    EK+KE++  
Sbjct: 126 IAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEIDRMTAEKEKELLSV 185


>gi|152980540|ref|YP_001353745.1| ribosome recycling factor [Janthinobacterium sp. Marseille]
 gi|166230794|sp|A6SZP8|RRF_JANMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151280617|gb|ABR89027.1| ribosome recycling factor [Janthinobacterium sp. Marseille]
          Length = 186

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +    +M  +I  LK D+  +RTGR    +LD V VE YG+   L+QVANVT+++ R + 
Sbjct: 8   KTADQKMQKSIETLKADLAKVRTGRAHTGILDHVMVEYYGNPTNLSQVANVTLIDARTIG 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K+MVA VE+ I E++LGLNP  +G+++R+P P  TEERR  +VK+  + AE +KI
Sbjct: 68  VQPFEKKMVAVVEKAIREADLGLNPATQGELIRVPTPPLTEERRKEMVKLVKSEAEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LKK  K    SED     +++IQK+TD  +  ID    EK+KE++  
Sbjct: 128 AVRNIRRDANESLKKLVKEKACSEDEERRAQDEIQKLTDKFVIEIDKLVVEKEKEVLTV 186


>gi|159901469|ref|YP_001547716.1| ribosome recycling factor [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894508|gb|ABX07588.1| ribosome recycling factor [Herpetosiphon aurantiacus ATCC 23779]
          Length = 192

 Score =  231 bits (591), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + +M  +I  L+  +  +RTGR SP++++ +KVE YGS +PLNQ+AN+   E RM+
Sbjct: 13  LRDAESKMKKSIDSLRHTLGAVRTGRASPALVEDLKVEYYGSEMPLNQLANIATPESRMI 72

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D+  + ++E+ I  S LG+NP  +G+V+R+ +P+ T+ERR  LVK   A  E  K
Sbjct: 73  TIQPYDQGAIKAIEKAIQNSELGINPSNDGRVIRLAIPQLTQERRKELVKQVKAKVEDGK 132

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR+  D ++K ++    SED     + ++QK+TD   K +++    K+ E+M  
Sbjct: 133 VAIRNVRREAQDAIRKLQQDKAISEDDERRGQEELQKLTDRFQKEVETIGTTKEAEVMEV 192


>gi|239626444|ref|ZP_04669475.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516590|gb|EEQ56456.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 183

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/181 (40%), Positives = 111/181 (61%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+  +D+M  T+  L  D  T+R GR +P +LD +KV+ YG+  PL QV NV+V E RM
Sbjct: 3   ELKIYEDKMNKTLDVLLSDFGTIRAGRANPHVLDKLKVDYYGTPTPLQQVGNVSVPEARM 62

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+  W+K ++  +E+ I  S LG+NP  +G  +R+  PE TE+RR  + K      E +
Sbjct: 63  IVIQPWEKSLLKPIEKAILTSELGINPTNDGNCIRLVFPEMTEDRRKEVSKDVKKKGEGA 122

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++RNIRRD  +  KK+ K+G  SED +      +QK+TD  ++ +D   EEK KEIM 
Sbjct: 123 KVALRNIRRDANEAFKKAEKAGDMSEDDLKEATEKMQKLTDKMVEKVDKAVEEKTKEIMT 182

Query: 186 F 186
            
Sbjct: 183 V 183


>gi|306825442|ref|ZP_07458782.1| ribosome recycling factor [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432380|gb|EFM35356.1| ribosome recycling factor [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 185

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLEV 185


>gi|291533215|emb|CBL06328.1| ribosome recycling factor [Megamonas hypermegale ART12/1]
          Length = 185

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 84/180 (46%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   ++RM  T+S  K +  +LR GR +P++LD V VE YGS VP+NQV N++V EPRM+
Sbjct: 6   IAKNEERMKKTLSAAKSEFASLRAGRATPALLDKVMVEYYGSLVPVNQVGNISVPEPRMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+K M+  +E+ I  S+LGL+P  +G V+R+ +P+ TEERR  LVK  +  AE+SK
Sbjct: 66  LIQPWEKPMLHEIEKAITRSDLGLSPNNDGTVIRLNIPQLTEERRTDLVKTLNKRAEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRRD  + +KK  K+   +ED     + DIQKI D  IK ID    EK+KEIM  
Sbjct: 126 VSVRNIRRDANEAIKKLEKAKSITEDDAKKAQEDIQKIVDKYIKEIDIARAEKEKEIMEV 185


>gi|269468297|gb|EEZ79979.1| ribosome recycling factor [uncultured SUP05 cluster bacterium]
          Length = 185

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 118/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   Q+  +RM  TI  L+     +R GR  PS+L+ + V+ YGS VP++QVAN++ 
Sbjct: 2   LNEI--QQDAGERMNKTIDSLENAFSKIRAGRAHPSLLEQIHVDYYGSMVPISQVANISA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V+ W+K+MVA +E+ I  S+LGLNP   GQV+RIP+P  TEERR  LV+V   
Sbjct: 60  EDSRTLKVTPWEKDMVAVIEKAIMTSDLGLNPQTMGQVMRIPLPPLTEERRRELVRVVKD 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++K+++RNIRRD     K+  K  + SED     E++IQKITD  +K+++     K+
Sbjct: 120 EAEQAKVAIRNIRRDANSDFKELLKEKEVSEDEARKAEDNIQKITDDHVKSVEDKLTHKE 179

Query: 181 KEIMHF 186
             ++  
Sbjct: 180 DSLLEI 185


>gi|329117138|ref|ZP_08245855.1| ribosome recycling factor [Streptococcus parauberis NCFD 2020]
 gi|326907543|gb|EGE54457.1| ribosome recycling factor [Streptococcus parauberis NCFD 2020]
          Length = 185

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++   +R   +   L ++  ++R GR + S+LD ++VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKANERFQQSHQSLSREYASIRAGRANASLLDRIQVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER I+ S+LG+ P  +G ++R+ +P  TEE R  L K      E SK
Sbjct: 66  MISPFDKSSIKDIERAINASDLGITPANDGSIIRLVIPALTEETRKELAKEVKKVGESSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K+ + +ED + SLE DIQK TD  IK+ID     K+KE++  
Sbjct: 126 IAIRNIRRDAMDDAKKQEKAKEITEDELKSLEKDIQKATDDAIKHIDQMTANKEKELLEV 185


>gi|290957080|ref|YP_003488262.1| ribosome recycling factor [Streptomyces scabiei 87.22]
 gi|260646606|emb|CBG69703.1| ribosome recycling factor [Streptomyces scabiei 87.22]
          Length = 186

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 7   LLEAEEKMEKAVVVAKDDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA + AE SK
Sbjct: 67  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRRDYIKVARSKAEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R +RR   D + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 127 VSIRAVRRKAKDAIDKLVKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 186


>gi|218133702|ref|ZP_03462506.1| hypothetical protein BACPEC_01571 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991077|gb|EEC57083.1| hypothetical protein BACPEC_01571 [Bacteroides pectinophilus ATCC
           43243]
          Length = 183

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 70/181 (38%), Positives = 111/181 (61%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D+   +D+M  ++  L +D  T+R GR +P +LD ++V+ Y +  PL QVAN++V E R+
Sbjct: 3   DIAIYEDKMKKSVEALLEDYKTIRAGRANPHILDKIRVDYYNTPTPLQQVANISVPEARI 62

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + +  WD  ++  +E+ I  S+LGL P  +G+V+R+  PE TE+RR  L K      E +
Sbjct: 63  IQIQPWDASLIKEIEKAIIVSDLGLTPNNDGKVIRLVFPELTEDRRKELSKDVKKKGENA 122

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++RN+RRD  D  KK  K+ + SED +   E+ IQKITD  I  +D   ++K KE+M 
Sbjct: 123 KVAIRNVRRDANDVFKKQNKANEISEDELKDAEDSIQKITDKYITEVDKCVDDKIKEVMT 182

Query: 186 F 186
            
Sbjct: 183 V 183


>gi|71275615|ref|ZP_00651900.1| Ribosome recycling factor [Xylella fastidiosa Dixon]
 gi|71899512|ref|ZP_00681669.1| Ribosome recycling factor [Xylella fastidiosa Ann-1]
 gi|170729576|ref|YP_001775009.1| ribosome recycling factor [Xylella fastidiosa M12]
 gi|182680889|ref|YP_001829049.1| ribosome recycling factor [Xylella fastidiosa M23]
 gi|71163506|gb|EAO13223.1| Ribosome recycling factor [Xylella fastidiosa Dixon]
 gi|71730732|gb|EAO32806.1| Ribosome recycling factor [Xylella fastidiosa Ann-1]
 gi|167964369|gb|ACA11379.1| ribosome recycling factor [Xylella fastidiosa M12]
 gi|182630999|gb|ACB91775.1| ribosome recycling factor [Xylella fastidiosa M23]
          Length = 190

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 122/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ +DRM  +I  L+  + ++RTGR SPS+LD +K++AYG+  PLNQVA+++V E R LV
Sbjct: 12  QDAQDRMTKSIDALRNSLASVRTGRASPSLLDGIKIKAYGTDTPLNQVASISVSEGRSLV 71

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK M   VE+ I+ S+LGL P V G ++R+ +P  TEERR  L KV H+  E +K+
Sbjct: 72  ITVFDKNMSKDVEKAIYASDLGLTPTVVGTLIRLNLPPLTEERRKELTKVVHSEGEDTKV 131

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   KS + +ED V   E DIQK+TD  IK++D   + K++E+M  
Sbjct: 132 AIRNIRRDANQQIKDMLKSKEITEDEVRHGEEDIQKLTDKAIKSVDEVVKSKEQELMTV 190


>gi|328885353|emb|CCA58592.1| Ribosome recycling factor [Streptomyces venezuelae ATCC 10712]
          Length = 186

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 7   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAITPINQLASFSVPEPRMA 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA   AE SK
Sbjct: 67  VVTPFDKSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRREYIKVAKGKAEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R++RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 127 ISIRSVRRKAKETIDKFVKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 186


>gi|148992922|ref|ZP_01822541.1| ribosome recycling factor [Streptococcus pneumoniae SP9-BS68]
 gi|168490239|ref|ZP_02714438.1| ribosome recycling factor [Streptococcus pneumoniae SP195]
 gi|147928374|gb|EDK79390.1| ribosome recycling factor [Streptococcus pneumoniae SP9-BS68]
 gi|183571379|gb|EDT91907.1| ribosome recycling factor [Streptococcus pneumoniae SP195]
 gi|332073277|gb|EGI83756.1| ribosome recycling factor [Streptococcus pneumoniae GA17570]
          Length = 185

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAVRNIRRDAMDEAKKREKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLEV 185


>gi|254670407|emb|CBA05960.1| Ribosome recycling factor [Neisseria meningitidis alpha153]
          Length = 208

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 117/186 (62%), Gaps = 1/186 (0%)

Query: 2   NQVIDLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           N + D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+
Sbjct: 23  NMINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTL 82

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R + V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV   
Sbjct: 83  LDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRG 142

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K+
Sbjct: 143 EAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTTKE 202

Query: 181 KEIMHF 186
           +++M  
Sbjct: 203 EDLMAI 208


>gi|285018794|ref|YP_003376505.1| ribosome recycling factor (rrf) protein [Xanthomonas albilineans
           GPE PC73]
 gi|283474012|emb|CBA16513.1| probable ribosome recycling factor (rrf) protein [Xanthomonas
           albilineans]
          Length = 185

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 116/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  +I  L+  ++ +RTGR S ++++ +KV  YGS +PL+QVA+V V + R L 
Sbjct: 7   QDAQTRMAKSIDALRHTLIKVRTGRASTALVEHLKVNYYGSEMPLSQVASVAVADARSLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K+MV++VE+ I  S+LGL P   G  +R+ +P  TEERR  L KV H   E +K+
Sbjct: 67  ITPWEKQMVSAVEKAILASDLGLTPNTAGTTIRLNLPALTEERRRELSKVVHGEGEDTKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD   H+K   K  K +ED     E+DIQK+TD  IK++D   + K++E+M  
Sbjct: 127 AIRNIRRDANQHIKDLLKDKKVTEDEARGSEDDIQKLTDKAIKDVDEVVKSKEQELMAV 185


>gi|125625049|ref|YP_001033532.1| Frr protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|166230795|sp|A2RNG1|RRF_LACLM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|124493857|emb|CAL98850.1| Frr protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071855|gb|ADJ61255.1| ribosome recycling factor [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 185

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 76/185 (41%), Positives = 125/185 (67%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+++     ++RM  +++ L++D+  LR GR + S+LD V+V  YG+  PLNQ+A++T+ 
Sbjct: 3   NEIV--TTAQERMKHSLASLQRDLGHLRAGRANASLLDRVQVVYYGAPTPLNQLASITIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+V+ +DK ++  +E+ ++ES+LG+ P  +G V+R+ +P  TEERR  LVK    Y
Sbjct: 61  EARVLMVTPFDKSILKDIEKALYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKY 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E +K+++RNIRRD MD  KKS K+ + +ED +  LEN+IQK+TD  +K  D     K+K
Sbjct: 121 IESAKVAIRNIRRDAMDTAKKSEKAKEITEDDLKDLENEIQKVTDDAVKEADRLASVKEK 180

Query: 182 EIMHF 186
           E++  
Sbjct: 181 ELLDI 185


>gi|17228703|ref|NP_485251.1| ribosome recycling factor [Nostoc sp. PCC 7120]
 gi|22001942|sp|Q8YXK4|RRF_ANASP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|17130555|dbj|BAB73165.1| ribosome recycling factor [Nostoc sp. PCC 7120]
          Length = 182

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 64/177 (36%), Positives = 108/177 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + +M  T+   ++   T+RTGR + S+LD V V+ YGS  PL  +AN++  +   +
Sbjct: 3   LAEAESKMQHTVEATQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +  VE+ I  S++GL P  +G V+R+ +P  T +RR  LVK+A  YAE+ +
Sbjct: 63  LIQPYDKSSLNIVEKAISLSDVGLTPSNDGAVIRLNIPPLTSDRRKELVKIAAKYAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD +D ++K  K+ + SED     ++ +QK+T+     ID    EK+K+I
Sbjct: 123 VAIRNIRRDAVDSIRKLEKNAEVSEDEAKDQQDKLQKLTNKYTARIDELLVEKEKDI 179


>gi|269217144|ref|ZP_06160998.1| ribosome recycling factor [Slackia exigua ATCC 700122]
 gi|269129281|gb|EEZ60366.1| ribosome recycling factor [Slackia exigua ATCC 700122]
          Length = 186

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 71/186 (38%), Positives = 110/186 (59%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+   +   ++ M   +S LK+    +RTGR +  +LD VKV+ YG   P+NQ+A V V
Sbjct: 1   MNEEEIMLEAEEGMEKALSNLKEAFAGVRTGRANAMVLDKVKVDYYGVPTPVNQMAAVKV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +  ML +  WDK MV ++E  I  S+LG+ P  +G V+R+P P+ TEERR  L K    
Sbjct: 61  PDAHMLTIEPWDKSMVRAIEAAILASDLGITPSNDGSVIRLPFPQLTEERRRDLAKQCKT 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           ++E+ +++VR  R      ++K +K+ + SED     E  IQK+TDS IK +D  F++K+
Sbjct: 121 FSEEGRVAVRKARGAANAAVEKLKKASEISEDDARRDEESIQKLTDSYIKKVDEMFKKKE 180

Query: 181 KEIMHF 186
            E+M  
Sbjct: 181 AELMAI 186


>gi|254467840|ref|ZP_05081246.1| ribosome recycling factor [beta proteobacterium KB13]
 gi|207086650|gb|EDZ63933.1| ribosome recycling factor [beta proteobacterium KB13]
          Length = 180

 Score =  231 bits (590), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ +K +M  TI  LK D   +RTGR    +LD + V+ YG+  PL+Q+ANVT+ +   +
Sbjct: 1   MEELKIKMEKTIERLKNDFSKIRTGRAHTGLLDHLSVDYYGTITPLSQMANVTLGDNVTI 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  +DK   +++E+ I +S+LGLNP V G ++R+P+P  TEERR  L+KV  +  E +K
Sbjct: 61  NVQPYDKTQTSAIEKVIRDSDLGLNPAVNGDLIRVPMPPLTEERRKDLIKVVKSEGENAK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RNIRRDG D LKK  K    SED     +  IQ +TD  IK+ID+    K+K+++  
Sbjct: 121 ISIRNIRRDGNDELKKQLKEKLISEDDEKRDQAKIQTLTDEFIKSIDNLITSKEKDLLEI 180


>gi|19745589|ref|NP_606725.1| ribosome recycling factor [Streptococcus pyogenes MGAS8232]
 gi|24418654|sp|Q8P274|RRF_STRP8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|19747714|gb|AAL97224.1| putative ribosome recycling factor [Streptococcus pyogenes
           MGAS8232]
          Length = 185

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 73/178 (41%), Positives = 115/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFAQSHQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  IK ID    EK+KE++
Sbjct: 126 IAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEIDRMTAEKEKELL 183


>gi|300866975|ref|ZP_07111646.1| Ribosome-recycling factor [Oscillatoria sp. PCC 6506]
 gi|300335010|emb|CBN56812.1| Ribosome-recycling factor [Oscillatoria sp. PCC 6506]
          Length = 182

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 61/177 (34%), Positives = 109/177 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D M   +   ++   T+RTGR + S+LD V V+ YGS  P+  +A+++  +   +
Sbjct: 3   LAEAEDHMQKAVESTQRSFNTIRTGRANASLLDRVMVDYYGSPTPIKSLASISTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D++ +  +E+ I  S++GL P  +G V+R+ +P  T +RRL LVK+A  ++E+ K
Sbjct: 63  NIQPFDRKTINLIEKAISLSDVGLTPSNDGSVIRLNIPPLTTDRRLELVKLAAKFSEEGK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +S+RNIRRD ++ ++K  KS + S+D    L++ +QK+TD  I  I+     K+K+I
Sbjct: 123 VSIRNIRRDAVESIRKQEKSSELSKDEARDLQDKMQKLTDKYIAKIEEVLAAKEKDI 179


>gi|300933102|ref|ZP_07148358.1| ribosome recycling factor [Corynebacterium resistens DSM 45100]
          Length = 185

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM  ++   ++++ T+RTGR +P+M + +  E YG   P+ Q+A ++V EPRML
Sbjct: 6   LLESEERMTSSVEHAREELTTIRTGRANPAMFNGIIAEYYGVPTPITQMATISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  ++   +  +E  I  S+LG+NP  +GQVLR+ VP+ TEERR  LVKVA +  E +K
Sbjct: 66  IIKPYEASTMQDIENAIRNSDLGVNPTNDGQVLRVTVPQLTEERRRDLVKVAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR GM+ L K +K G+A ED V + E D++K+T + ++ +D+  E K+KE+M  
Sbjct: 126 IAIRNIRRKGMEGLGKIQKDGEAGEDEVKAAEKDLEKVTQNHVEQVDALVENKEKELMEV 185


>gi|297538506|ref|YP_003674275.1| ribosome recycling factor [Methylotenera sp. 301]
 gi|297257853|gb|ADI29698.1| ribosome recycling factor [Methylotenera sp. 301]
          Length = 185

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 73/177 (41%), Positives = 106/177 (59%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +  +M   +  LK D+  +RTGR    +LD V VE YGS V +NQVANV + + R + V 
Sbjct: 9   VDQKMQRALEALKTDLAKVRTGRAHTGLLDHVMVEYYGSMVAVNQVANVNLGDSRTIHVQ 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            ++K M+  VE+ I + +LGLNP   G ++R+P+P  TEERR  + K+  + AE +K+SV
Sbjct: 69  PFEKSMIGKVEKAIRDCDLGLNPATNGDLIRVPMPMLTEERRRDMTKIVRSEAEGAKVSV 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RN RRD  D LKK  K  + SED     ++D+QK TD  +  ID   + K+ E+M  
Sbjct: 129 RNARRDANDTLKKLLKDKEISEDEERRAQDDVQKATDKAVAEIDKMLQVKEVELMAV 185


>gi|225388995|ref|ZP_03758719.1| hypothetical protein CLOSTASPAR_02740 [Clostridium asparagiforme
           DSM 15981]
 gi|225044935|gb|EEG55181.1| hypothetical protein CLOSTASPAR_02740 [Clostridium asparagiforme
           DSM 15981]
          Length = 183

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 74/181 (40%), Positives = 111/181 (61%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+  +D+M  T+  L+ +   +R GR +P +LD +KV+ YG+  PL QV N++V E RM
Sbjct: 3   ELKKYEDKMNKTLDVLEDEFGAIRAGRANPHVLDKIKVDYYGTPTPLQQVGNISVPEARM 62

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+  W+K ++  +E+ I  S LG+NP  +G  +R+  PE TE+RR  L K      +++
Sbjct: 63  IVIQPWEKSLIKPIEKAILTSELGINPNNDGNAIRLIFPELTEDRRKELAKDVKKKGDQA 122

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++RNIRRD MD  KK  KSG  SED     E  +QK+TD  I+ +D   E K KEIM 
Sbjct: 123 KVAIRNIRRDAMDAFKKMEKSGDMSEDDRDLAEEKMQKLTDKMIEKVDKAVETKTKEIMT 182

Query: 186 F 186
            
Sbjct: 183 V 183


>gi|328948074|ref|YP_004365411.1| ribosome-recycling factor [Treponema succinifaciens DSM 2489]
 gi|328448398|gb|AEB14114.1| Ribosome-recycling factor [Treponema succinifaciens DSM 2489]
          Length = 179

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 122/179 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + + RM  T++ LK++  ++RTGR S ++ D V+V+ YG+  PLNQV N+++ E R +
Sbjct: 1   MADNESRMEKTVNSLKEEYKSIRTGRASAAIFDKVRVDYYGTPTPLNQVGNISIPEARTI 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK ++  +E+ I ++ LGLNP  +G+V+RI +P  T +RR  LVK A A AE  +
Sbjct: 61  VISPFDKSIMGDIEKAIQKAELGLNPNNDGKVIRIAIPPLTADRRKELVKQAKATAENYR 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            ++RNIRRDG + LKK +K+G+ +ED + +    +QK+TD  I+ I+  +E K+KEIM 
Sbjct: 121 TTIRNIRRDGNEDLKKQQKAGELTEDQLKTETEKLQKLTDKYIEEINGIYEAKEKEIME 179


>gi|323339424|ref|ZP_08079706.1| ribosome recycling factor [Lactobacillus ruminis ATCC 25644]
 gi|323093135|gb|EFZ35725.1| ribosome recycling factor [Lactobacillus ruminis ATCC 25644]
          Length = 240

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 78/184 (42%), Positives = 122/184 (66%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M    +L   +++M    + L+ ++  +R G  + S+L+ V VE YG+  PLNQ+A ++V
Sbjct: 55  MGVSSELVKYQEKMQKAEAALQHELGGIRAGVANASLLNRVMVEYYGAPTPLNQMAQISV 114

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+V+ +DK  +  VE  +  S+LGL P+ +G  +R+ +P+ TEERR  L K   A
Sbjct: 115 PEARVLLVTPYDKSSLKDVEHALLASDLGLTPMNDGSAIRLVIPQLTEERRKELAKQVRA 174

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AEK K++VRN+RR+ MD LKK++K+G  SED++  LE++ QKITD++IKNID     K+
Sbjct: 175 AAEKGKVAVRNVRREMMDSLKKAQKNGDMSEDVLHDLEDEAQKITDASIKNIDGITAAKE 234

Query: 181 KEIM 184
           KEI+
Sbjct: 235 KEIL 238


>gi|153853432|ref|ZP_01994841.1| hypothetical protein DORLON_00830 [Dorea longicatena DSM 13814]
 gi|149754218|gb|EDM64149.1| hypothetical protein DORLON_00830 [Dorea longicatena DSM 13814]
          Length = 183

 Score =  231 bits (590), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 119/186 (63%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+   L+  +++M  TI  L  ++  +R GR +P++L+ + V+ YG+  P+ QVANV+V
Sbjct: 1   MNER--LKPFEEKMKKTIGNLDGELSAIRAGRANPNVLNKIMVDYYGTPTPIQQVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+K+MV  +E+ I  S+LG+NP  +G  +R+  PE TE+RR  LVK    
Sbjct: 59  PEARMIQIQPWEKKMVREIEKAIMTSDLGINPTNDGTTVRLLFPELTEDRRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+++RNIRRDG+D +KK  K    SED +  +E+D+QK+TD  +K +D   E K 
Sbjct: 119 KGEAAKVAIRNIRRDGIDSVKKL-KGSDVSEDEMKDMEDDLQKLTDKYVKEVDKAVEAKS 177

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 178 KEVMTV 183


>gi|161870876|ref|YP_001600050.1| ribosome recycling factor [Neisseria meningitidis 053442]
 gi|161596429|gb|ABX74089.1| ribosome recycling factor [Neisseria meningitidis 053442]
 gi|254672753|emb|CBA06770.1| Ribosome recycling factor [Neisseria meningitidis alpha275]
 gi|308388405|gb|ADO30725.1| ribosome recycling factor [Neisseria meningitidis alpha710]
          Length = 208

 Score =  231 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 116/186 (62%), Gaps = 1/186 (0%)

Query: 2   NQVIDLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           N + D+Q   + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+
Sbjct: 23  NMINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTL 82

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R + V  ++  M   VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV   
Sbjct: 83  LDARTIGVKPFEGNMAVKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRG 142

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K+
Sbjct: 143 EAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKE 202

Query: 181 KEIMHF 186
           +++M  
Sbjct: 203 EDLMAI 208


>gi|145224703|ref|YP_001135381.1| ribosome recycling factor [Mycobacterium gilvum PYR-GCK]
 gi|315445033|ref|YP_004077912.1| ribosome recycling factor [Mycobacterium sp. Spyr1]
 gi|189044062|sp|A4TC77|RRF_MYCGI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145217189|gb|ABP46593.1| ribosome recycling factor [Mycobacterium gilvum PYR-GCK]
 gi|315263336|gb|ADU00078.1| ribosome recycling factor [Mycobacterium sp. Spyr1]
          Length = 185

 Score =  231 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  + D+ ++RTGR +P M + + ++ YG+  P+ Q++++ V E RM+
Sbjct: 6   LFDAEEKMEKAVSVARDDLASIRTGRANPGMFNRIHIDYYGASTPITQLSSINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   +  +E  I  S+LG+NP  +G ++R+ +P+ TEERR  LVK A +  E +K
Sbjct: 66  VIKPYEANQLRPIEDAIRNSDLGVNPTNDGNIIRVSIPQLTEERRRDLVKQAKSKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR  M+ L + +K G A ED V   E D+ K T      +D   + K+ E++  
Sbjct: 126 VSIRNIRRKAMEELARIKKDGDAGEDDVTRAEKDLDKSTHQYTSQVDDLVKHKEGELLEV 185


>gi|227536081|ref|ZP_03966130.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300772051|ref|ZP_07081921.1| ribosome recycling factor [Sphingobacterium spiritivorum ATCC
           33861]
 gi|227243978|gb|EEI93993.1| peptide chain release factor RF4 [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300760354|gb|EFK57180.1| ribosome recycling factor [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 187

 Score =  231 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 84/188 (44%), Positives = 124/188 (65%), Gaps = 3/188 (1%)

Query: 1   MNQVIDLQ--NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN++I LQ  + KD M   +SF + ++  +R G+ SPSMLD + V+ YGS  PL QV+NV
Sbjct: 1   MNELISLQLDDCKDSMTKAVSFAESELTKIRAGKASPSMLDGISVDYYGSPTPLAQVSNV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R +V+  W+K +++++E+ I +SNLGLNP  +G V+R+ VP  TEERR  LVK A
Sbjct: 61  NTTDARTIVIQPWEKSLISAIEKAIIDSNLGLNPQNDGIVIRLVVPALTEERRRDLVKKA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AEK +I++RNIR+D  + +KK +  G ASED +   E ++QK+TDS I  +D   E 
Sbjct: 121 KEEAEKGRIAIRNIRKDTNESIKKLKNDG-ASEDEIKVGEAEVQKLTDSFIVQVDKLAEL 179

Query: 179 KKKEIMHF 186
           K+K+IM  
Sbjct: 180 KEKDIMTV 187


>gi|197119126|ref|YP_002139553.1| ribosome recycling factor [Geobacter bemidjiensis Bem]
 gi|226749930|sp|B5EHV8|RRF_GEOBB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|197088486|gb|ACH39757.1| ribosome recycling factor [Geobacter bemidjiensis Bem]
          Length = 185

 Score =  231 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + ++   M  +I  L+K+   +RTGR S S+LD +KV++YG+  PLNQVA + + E R +
Sbjct: 6   ISSMNVHMDKSIESLRKEYQKVRTGRASTSLLDDIKVDSYGTLSPLNQVATLAIPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S WD +M+A +E+ I  SNLGLNP  +G+++R+ +P  TEERR  +VK     AE +K
Sbjct: 66  TISPWDSKMIAPIEKAIMNSNLGLNPANDGKMIRLTLPPLTEERRKDIVKQLKRDAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +D LKK  K    SED     E ++Q  T+S +  +D     K+KE+M  
Sbjct: 126 VALRNIRRDAIDQLKKLEKDKSISEDEQKRAEKEVQDFTNSHVAKVDEVLLHKEKEVMEV 185


>gi|325923975|ref|ZP_08185564.1| ribosome recycling factor [Xanthomonas gardneri ATCC 19865]
 gi|325545558|gb|EGD16823.1| ribosome recycling factor [Xanthomonas gardneri ATCC 19865]
          Length = 185

 Score =  231 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+   RM  +I  L+  + T+RTGR SP++LD +KV+AYG+  PLNQVA+++V E R LV
Sbjct: 7   QDALTRMTKSIDALRHSLTTVRTGRASPALLDNIKVKAYGTDTPLNQVASISVSEGRSLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S++DK M+  VE+ I+ S+LGL P V G V+R+ +P  TEERR  L K  H   E SK+
Sbjct: 67  ISLFDKGMIKDVEKAIYASDLGLTPTVVGTVIRLNLPPLTEERRKELSKSVHGEGEDSKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   K    +ED   S E+DIQK+TD  IK++D   + K++E+M  
Sbjct: 127 AIRNIRRDANQQVKDLLKDKAVTEDEARSAEDDIQKLTDKAIKDVDEVVKGKEQELMTV 185


>gi|148553387|ref|YP_001260969.1| ribosome recycling factor [Sphingomonas wittichii RW1]
 gi|166231512|sp|A5V3G5|RRF_SPHWW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|148498577|gb|ABQ66831.1| ribosome recycling factor [Sphingomonas wittichii RW1]
          Length = 185

 Score =  231 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 88/169 (52%), Positives = 117/169 (69%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  +++ RM   +  LK D+  LRTGR S ++LD V VE YG+H+PLNQ A VT  EPR
Sbjct: 4   YDKADLERRMHGAVEALKSDLTGLRTGRASVNLLDPVTVEIYGAHMPLNQAATVTAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V VWD+  V  V++ I  + LGLNPIV+GQ LRIP+P+ TEERR  L K+A  YAEK
Sbjct: 64  MLSVQVWDRSNVGPVDKAIRSAGLGLNPIVDGQTLRIPIPDLTEERRKELAKLASQYAEK 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           ++++VRN+RRDGMD LK   K G+  ED     E ++QK+TD+TI ++D
Sbjct: 124 ARVAVRNVRRDGMDSLKTDEKKGEIGEDDRKRRETEVQKLTDATISDVD 172


>gi|160893344|ref|ZP_02074131.1| hypothetical protein CLOL250_00893 [Clostridium sp. L2-50]
 gi|156865036|gb|EDO58467.1| hypothetical protein CLOL250_00893 [Clostridium sp. L2-50]
          Length = 181

 Score =  231 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  T+  L+ +  T+R GR +P++L+ +KVE YG   P+ Q+AN+TV E R L
Sbjct: 2   LTQYEEKMTKTVENLEGEYATIRAGRANPNILNKIKVEYYGVPTPMQQLANITVPEARTL 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+  +V ++E+ I  S+LGL P  +G+ + +  PE TEERR  +VK      E +K
Sbjct: 62  MIAPWEPSLVKAIEKAILNSDLGLTPNNDGKNIILNFPELTEERRKEIVKDIKKKGENAK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRD  D +KK  K+G  SED + + E+ IQK+TD  +  ID   E+K  EI+  
Sbjct: 122 VAIRNVRRDANDAIKKMEKAGDISEDELKTNEDKIQKMTDKYVGLIDKAIEKKSTEILTV 181


>gi|301165592|emb|CBW25163.1| ribosome recycling factor [Bacteriovorax marinus SJ]
          Length = 185

 Score =  231 bits (589), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 74/186 (39%), Positives = 108/186 (58%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I L  +  +M  +I  LK  +  +RTGR S S+LD V V+ YGS  P+ QV  ++ 
Sbjct: 1   MMDEIKLA-LNTQMTKSIDSLKYQLTKVRTGRASASVLDGVHVDYYGSPTPVAQVGQIST 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L +  +DK M+A++E+ I  +NLGL P  +G ++RIP P  TEERR   VK    
Sbjct: 60  PEARLLQIQPFDKTMIAAIEKAILGANLGLTPSNDGNLIRIPFPALTEERRKEQVKEIKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +KI +RN RRD  + +KK+ K+ + SED     + DIQ ITD  +  +D   E K+
Sbjct: 120 SGEDAKIGIRNSRRDQNEVVKKAEKAKEISEDESKKFQADIQTITDKYVAEVDVIIEAKE 179

Query: 181 KEIMHF 186
           KE++  
Sbjct: 180 KELLSI 185


>gi|15902890|ref|NP_358440.1| ribosome recycling factor [Streptococcus pneumoniae R6]
 gi|116516857|ref|YP_816318.1| ribosome recycling factor [Streptococcus pneumoniae D39]
 gi|32171542|sp|Q8DQ49|RRF_STRR6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122278796|sp|Q04KY0|RRF_STRP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|15458449|gb|AAK99650.1| Ribosome recycling factor [Streptococcus pneumoniae R6]
 gi|116077433|gb|ABJ55153.1| ribosome recycling factor [Streptococcus pneumoniae D39]
          Length = 185

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 117/186 (62%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  VI ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+
Sbjct: 1   MANVI-IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+V+ +DK  +  ++R ++ S+LG+ P  +G V+R+ +P  TEE R  L K    
Sbjct: 60  PEARVLLVTPFDKSSLKDIDRALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+
Sbjct: 120 VGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKE 179

Query: 181 KEIMHF 186
           KE++  
Sbjct: 180 KELLEV 185


>gi|71899406|ref|ZP_00681565.1| Ribosome recycling factor [Xylella fastidiosa Ann-1]
 gi|71730815|gb|EAO32887.1| Ribosome recycling factor [Xylella fastidiosa Ann-1]
          Length = 190

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 82/179 (45%), Positives = 122/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ +DRM  +I  L+  + ++RTGR SPS+LD +K++AYG+  PLNQVA+++V E R LV
Sbjct: 12  QDAQDRMTKSIDALRNSLASVRTGRASPSLLDGIKIKAYGTDTPLNQVASISVSEGRSLV 71

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DK M   VE+ I+ S+LGL P V G ++R+ +P  TEERR  L KV H+  E +K+
Sbjct: 72  ITVFDKNMSKDVEKAIYASDLGLTPTVVGTLIRLNLPPLTEERRKELTKVVHSEGEDTKV 131

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K   KS + +ED V   E DIQK+TD  IK++D   + K++E+M  
Sbjct: 132 AIRNIRRDANQQIKDMLKSKEITEDEVRHGEEDIQKLTDKAIKSVDKVVKSKEQELMTV 190


>gi|325983649|ref|YP_004296051.1| ribosome recycling factor [Nitrosomonas sp. AL212]
 gi|325533168|gb|ADZ27889.1| ribosome recycling factor [Nitrosomonas sp. AL212]
          Length = 185

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  ++  LK D+  +R+GR     LD + V+ YG+  PL+QVAN+ +++ R + 
Sbjct: 7   KSAEQKMQKSLEALKVDLSKVRSGRAHAGFLDHITVDYYGTQTPLSQVANINLIDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+M   +E+ I ES+LGLNP+  G+ +R+P+P  TEERR  L+KV    AE  +I
Sbjct: 67  VIPWEKKMGNVIEKAIRESDLGLNPMPVGETIRVPMPALTEERRRDLIKVVKQEAENVRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD   HLK   KS + SED     +++IQK+TD  I  ID     K+ E+M  
Sbjct: 127 AMRNIRRDANTHLKDLLKSKEISEDDERRGQDEIQKLTDRYITEIDKILHIKETELMAV 185


>gi|312194965|ref|YP_004015026.1| ribosome recycling factor [Frankia sp. EuI1c]
 gi|311226301|gb|ADP79156.1| ribosome recycling factor [Frankia sp. EuI1c]
          Length = 185

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K D   +RTGR++PS+   + V+ YG+  P+ Q+A+  + EPRM+
Sbjct: 6   LLEAEEKMDKAVTVAKDDFANIRTGRITPSVFSKILVDYYGAPTPVQQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  ++++E+ + +S+LG+NP  +G ++R+  PE +E+RR  LVKVA   AE +K
Sbjct: 66  IITPFDKSSLSAIEKAVRDSDLGVNPSNDGTIIRVVFPELSEQRRRDLVKVARGKAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RN+RR   + L K  K G A ED     E D+++ T   +  ID   + K+ +++  
Sbjct: 126 ISIRNVRRHAKEALDKIVKDGDAGEDEGRRAEKDLEESTHRYVAQIDELLKAKESDLLSV 185


>gi|18310679|ref|NP_562613.1| ribosome recycling factor [Clostridium perfringens str. 13]
 gi|110800605|ref|YP_696384.1| ribosome recycling factor [Clostridium perfringens ATCC 13124]
 gi|110802993|ref|YP_698984.1| ribosome recycling factor [Clostridium perfringens SM101]
 gi|168208114|ref|ZP_02634119.1| ribosome recycling factor [Clostridium perfringens E str. JGS1987]
 gi|168211415|ref|ZP_02637040.1| ribosome recycling factor [Clostridium perfringens B str. ATCC
           3626]
 gi|168214470|ref|ZP_02640095.1| ribosome recycling factor [Clostridium perfringens CPE str. F4969]
 gi|168216984|ref|ZP_02642609.1| ribosome recycling factor [Clostridium perfringens NCTC 8239]
 gi|169342698|ref|ZP_02863739.1| ribosome recycling factor [Clostridium perfringens C str. JGS1495]
 gi|182627138|ref|ZP_02954853.1| ribosome recycling factor [Clostridium perfringens D str. JGS1721]
 gi|20141648|sp|Q46293|RRF_CLOPE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122956643|sp|Q0SSC3|RRF_CLOPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123344670|sp|Q0TPQ6|RRF_CLOP1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|18145360|dbj|BAB81403.1| ribosome recycling factor [Clostridium perfringens str. 13]
 gi|110675252|gb|ABG84239.1| ribosome recycling factor [Clostridium perfringens ATCC 13124]
 gi|110683494|gb|ABG86864.1| ribosome recycling factor [Clostridium perfringens SM101]
 gi|169299204|gb|EDS81274.1| ribosome recycling factor [Clostridium perfringens C str. JGS1495]
 gi|170660605|gb|EDT13288.1| ribosome recycling factor [Clostridium perfringens E str. JGS1987]
 gi|170710572|gb|EDT22754.1| ribosome recycling factor [Clostridium perfringens B str. ATCC
           3626]
 gi|170714030|gb|EDT26212.1| ribosome recycling factor [Clostridium perfringens CPE str. F4969]
 gi|177907475|gb|EDT70141.1| ribosome recycling factor [Clostridium perfringens D str. JGS1721]
 gi|182380949|gb|EDT78428.1| ribosome recycling factor [Clostridium perfringens NCTC 8239]
          Length = 185

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI+ L  ++ T++ GR +P+MLD ++VE YGS  PLNQVANV+  EPR+L
Sbjct: 6   IKKSEEKMNKTINSLNSELATMKAGRANPTMLDRIQVEYYGSMCPLNQVANVSSPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ W+K M+  +E+ I +S+LG+NP  +G ++R+ VPE TEE R  LVK      E++K
Sbjct: 66  VITPWEKPMLKEIEKAILKSDLGINPNNDGTIIRLLVPELTEETRKNLVKNVKKVGEQAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IR+D  D +K  +K G  +ED +   E+DIQK+TD  +K ID+    K+KEIM  
Sbjct: 126 VAIRSIRKDANDKVKNFKKEGTITEDEMKKGEDDIQKVTDKFVKEIDTIVAAKEKEIMSI 185


>gi|77408576|ref|ZP_00785312.1| ribosome recycling factor [Streptococcus agalactiae COH1]
 gi|77172850|gb|EAO75983.1| ribosome recycling factor [Streptococcus agalactiae COH1]
          Length = 185

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   ++R   +   L ++   +R GR + S+LD ++VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   VTKAQERFEQSHQSLSREFAGIRAGRANASLLDRIQVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERAINESDLGINPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD   K  K+ + +ED + SLE DIQK TD  +K+ID     K+KE++  
Sbjct: 126 IAIRNIRRDAMDEAXKQEKNKEITEDDLKSLEKDIQKATDDAVKHIDEMTVNKEKELLEV 185


>gi|284032627|ref|YP_003382558.1| ribosome recycling factor [Kribbella flavida DSM 17836]
 gi|283811920|gb|ADB33759.1| ribosome recycling factor [Kribbella flavida DSM 17836]
          Length = 185

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +M   +   K D   +RTGR  PSM   +  + YGS  PL Q+A   V EPR +
Sbjct: 6   LREAEQKMAKAVEVAKNDFAAIRTGRAHPSMFASLLADYYGSPTPLQQLAGFQVPEPRTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A++E+ I +S+LG+NP  +G V+R+ +P+ TEERR   +KVA   AE++K
Sbjct: 66  LISPYDKGAMAAIEKAIRDSDLGVNPGNDGSVIRVVMPQLTEERRKEYIKVARTKAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR   D + K+ K G+A ED   S E  +  +T   + +ID   + K+ E++  
Sbjct: 126 VSMRNIRRHAKDVVDKTVKDGQAGEDEGKSAEKRLDGLTKKYVDSIDELLKHKEAELLEV 185


>gi|86140791|ref|ZP_01059350.1| ribosome releasing factor [Leeuwenhoekiella blandensis MED217]
 gi|85832733|gb|EAQ51182.1| ribosome releasing factor [Leeuwenhoekiella blandensis MED217]
          Length = 187

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 78/188 (41%), Positives = 112/188 (59%), Gaps = 3/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I   L   ++ M + ++ LKK    +R G+ SPSML  V V+ YGS  PL QVANV
Sbjct: 1   MNEDIQFILDGTEEAMQNAVNHLKKQFANIRAGKASPSMLGSVMVDYYGSQTPLAQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + +  W+K M+  +E+ I  +NLG NP+  G+ + I VP  TEERR  LVK A
Sbjct: 61  NTPDGRTISIQPWEKSMIQEIEKAIMNANLGFNPMNNGESVIINVPPLTEERRRDLVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE +K+ VRN R++  + +KK  K G  +ED+ ++ E D+Q +TD  IK ID     
Sbjct: 121 KAEAEDAKVGVRNDRKNANNDIKKLEKDG-LAEDICSNAEVDVQDLTDKYIKRIDELLAV 179

Query: 179 KKKEIMHF 186
           K+KEI+  
Sbjct: 180 KEKEILTV 187


>gi|288575126|ref|ZP_06393483.1| ribosome recycling factor [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570867|gb|EFC92424.1| ribosome recycling factor [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 186

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 68/184 (36%), Positives = 116/184 (63%), Gaps = 1/184 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ V    +++++M   + FLK + + +RTGR  P ++  +KV+ YG+  PL Q+A ++V
Sbjct: 1   MSDVTKF-DLEEKMRKAVDFLKGEFVGIRTGRAHPGLVSDIKVDYYGASTPLKQLATISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R L+++ +DK ++  +E+ I  S+LG+ P  +GQV+R+ +PE T +RR  L K+ H 
Sbjct: 60  PEGRSLLITPFDKTVLKDLEKAILASDLGVTPQNDGQVIRLNLPELTGDRRKELTKMVHK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E+++I+VRN+RRD  D  KK     +  ED      + IQKITD  I+ ID   ++K+
Sbjct: 120 LSEEARIAVRNLRRDCNDFYKKKLNESEIGEDQYHDFLDQIQKITDGYIQEIDKVMKDKE 179

Query: 181 KEIM 184
           +EI+
Sbjct: 180 EEIL 183


>gi|195978553|ref|YP_002123797.1| ribosome recycling factor [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|225868107|ref|YP_002744055.1| ribosome recycling factor [Streptococcus equi subsp. zooepidemicus]
 gi|225870940|ref|YP_002746887.1| ribosome recycling factor [Streptococcus equi subsp. equi 4047]
 gi|226749941|sp|B4U467|RRF_STREM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809531|sp|C0MBT1|RRF_STRE4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|259494555|sp|C0MCC9|RRF_STRS7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|195975258|gb|ACG62784.1| ribosome recycling factor Frr [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225700344|emb|CAW94656.1| ribosome recycling factor [Streptococcus equi subsp. equi 4047]
 gi|225701383|emb|CAW98452.1| ribosome recycling factor [Streptococcus equi subsp. zooepidemicus]
          Length = 185

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFTQSHHSLAREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGETAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  +K ID    +K+KE++  
Sbjct: 126 VSIRNIRRDAMDEAKKQEKAKEITEDELKALEKDIQKATDEAVKEIDRMTADKEKELLSV 185


>gi|297624998|ref|YP_003706432.1| ribosome recycling factor [Truepera radiovictrix DSM 17093]
 gi|297166178|gb|ADI15889.1| ribosome recycling factor [Truepera radiovictrix DSM 17093]
          Length = 184

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + RM  ++   + ++  +RTGR +P++L+ ++V  YG+  PLNQ+A V+  + R L
Sbjct: 5   LDEARTRMQKSLEAFENNIAAVRTGRANPAILNRIQVNYYGAQTPLNQLATVSSPDARTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK +   +E+ I ES+LG NP   G  L I VP   +ERR ALVK     AE+++
Sbjct: 65  VITPFDKSVAKDIEKAIRESDLGFNPNNRGDSLFISVPPLNDERRRALVKQVKTMAEEAR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  + LK+ RK    ++D +   END+Q++TD  +  ID   + K+++IM  
Sbjct: 125 VAVRNVRRDANEELKEMRKENLLTDDELRQGENDVQRLTDEFVGQIDKRVKSKEEDIMAV 184


>gi|290968867|ref|ZP_06560404.1| ribosome recycling factor [Megasphaera genomosp. type_1 str. 28L]
 gi|290781163|gb|EFD93754.1| ribosome recycling factor [Megasphaera genomosp. type_1 str. 28L]
          Length = 186

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +QN +++M  TI  LK+D  ++RTGR S S+LD V VE YG+  P+ QVANV+  EP ++
Sbjct: 7   VQNYEEKMDKTIEALKRDFTSIRTGRASTSLLDRVTVEYYGTPTPIKQVANVSAPEPSLI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+++++  +E+ I +S+LGLNP  +G ++R+ +P+ TEERR  L K    YAE++K
Sbjct: 67  TIVPWERKILGDIEKAILKSDLGLNPNNDGAMIRLEIPKPTEERRKELTKKVSKYAEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +RNIRRD  D +KK+ K+ + +ED    +++ IQK+TD  +K ID    +K+KE+M  
Sbjct: 127 VVIRNIRRDANDSIKKAEKAKEITEDESKDVQDKIQKLTDKKVKFIDELKLKKEKEVMEV 186


>gi|219847470|ref|YP_002461903.1| ribosome recycling factor [Chloroflexus aggregans DSM 9485]
 gi|254809501|sp|B8G461|RRF_CHLAD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219541729|gb|ACL23467.1| ribosome recycling factor [Chloroflexus aggregans DSM 9485]
          Length = 185

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 73/186 (39%), Positives = 119/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N VI+    +  +      L+  + ++RTGR S ++++ + VEAYG+++PLNQ+AN++V
Sbjct: 2   LNDVIN--EYEAHLKKATEALRHHLASIRTGRASAALVEHLHVEAYGTNMPLNQLANISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+++  +D  M+ ++E+ I +S+LGLNP  +G+++R+PVP  TEERR  LVK+   
Sbjct: 60  PEPRMIIIQPYDTGMIKAIEKAIQQSDLGLNPSNDGRIIRLPVPPLTEERRRELVKMVRH 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ K+SVRN RRD +D LKK       SED +   +  IQ++TD   + +D    EK+
Sbjct: 120 RVEEVKVSVRNQRRDAIDDLKKLEADKLISEDELHRGQERIQQLTDRCNRELDQIGAEKE 179

Query: 181 KEIMHF 186
            E+M  
Sbjct: 180 AEVMAI 185


>gi|295114850|emb|CBL35697.1| ribosome recycling factor [butyrate-producing bacterium SM4/1]
          Length = 181

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 72/173 (41%), Positives = 108/173 (62%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +++M  +   L  +  ++R GR +P +LD ++V+ YG+  PL QVAN++V EPRM+ +  
Sbjct: 9   EEKMDKSYDALLNEFSSIRAGRANPHVLDKLRVDYYGAPTPLQQVANISVPEPRMIQIQP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K +V ++E+ I  S+LG+NP  +G V+R+  PE TEERR  L K      E +K++VR
Sbjct: 69  WEKSLVKAIEKAILTSDLGINPSNDGSVIRLIFPELTEERRKELAKDIKKKGEGAKVAVR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           NIRRD  D  KK  K+ + SED ++  E  IQK+TD  I  ID   E K K +
Sbjct: 129 NIRRDANDTFKKMEKANEISEDDLSDAEEKIQKMTDKMIDKIDKAVETKTKRL 181


>gi|291557942|emb|CBL35059.1| ribosome recycling factor [Eubacterium siraeum V10Sc8a]
          Length = 184

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 70/186 (37%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  VI+    KD+MG  ++ ++ +  ++R GR +P++LD V V+ YG    +N +A V V
Sbjct: 1   MKDVIN--TAKDKMGKCVAAVETEYASIRAGRANPAVLDKVTVDYYGVPTQINAMAAVAV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV++ WD   + S+E+ I  S++G+ P  +G+ +RI  P+ TEERR  L K    
Sbjct: 59  SEARVLVITPWDASTLKSIEKAILASDIGITPTNDGKAIRITFPQLTEERRKELCKQVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ K++VRN+RRD M+  K  +K+ + +ED + + E D+QK+TD     +D+    K+
Sbjct: 119 IAEEGKVAVRNVRRDAMEKFKAMKKNSEITEDDLKNCEKDVQKLTDKYCDEMDAACSAKE 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMTV 184


>gi|313891269|ref|ZP_07824887.1| ribosome recycling factor [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120336|gb|EFR43457.1| ribosome recycling factor [Streptococcus pseudoporcinus SPIN 20026]
          Length = 185

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ++++TV E R+L
Sbjct: 6   IDKAKQRFEQSFQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLSSITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E  K
Sbjct: 66  LISPFDKNSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKNLAKEVKKVGENQK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K  + SED + +LE DIQK+TD  IK+ID+   EK+KE++  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKDKEISEDELKTLEKDIQKVTDDAIKHIDAMTAEKEKELLSV 185


>gi|270290321|ref|ZP_06196546.1| ribosome recycling factor [Pediococcus acidilactici 7_4]
 gi|270281102|gb|EFA26935.1| ribosome recycling factor [Pediococcus acidilactici 7_4]
          Length = 186

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 65/179 (36%), Positives = 116/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +++M      L++D+ ++R GR + S+LD V V+ YG+  PLNQ+A++++ EPR+L
Sbjct: 7   LKTAEEKMHKAHQALERDLGSIRAGRANASLLDRVTVDYYGAPTPLNQMASISIPEPRVL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ +  ++LG+NP  +G  +R+ +P+ TEE R  L K   A  EK K
Sbjct: 67  LITPYDKSVLNDIEQALLVADLGINPANDGSAIRLVIPQLTEETRKELAKDVKAEGEKGK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RR+ M+ LKK+ K+G  ++D    LE   Q ITD  IK ++     K+KE++ 
Sbjct: 127 VAIRNVRREAMEALKKAHKNGDYNDDEFHDLEKQAQDITDKAIKKVEEIVANKEKEVLE 185


>gi|158320548|ref|YP_001513055.1| ribosome recycling factor [Alkaliphilus oremlandii OhILAs]
 gi|166991552|sp|A8MHH2|RRF_ALKOO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|158140747|gb|ABW19059.1| ribosome recycling factor [Alkaliphilus oremlandii OhILAs]
          Length = 185

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 124/179 (69%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M  TI+ LK ++ ++R GR +P+MLD + VE YGS  P+ Q+A +T  EPR++ 
Sbjct: 7   KNLEEKMNKTINALKDELASIRAGRANPAMLDRIVVEYYGSPTPIKQIAAITAPEPRIIS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   ++S+E+ I +S+LG+NP  +G+++RI VP+ TEERR  L KVA   +E +K+
Sbjct: 67  IQPYDGSALSSIEKAILQSDLGVNPSNDGKLIRIIVPQLTEERRKELTKVAKKTSEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RN RR+  D LKK +K  + +ED + + ++++QKITD  IK +D   E+K+K+IM  
Sbjct: 127 VLRNERRNANDRLKKMQKDNEITEDELKTAQDEVQKITDKFIKMVDELTEKKEKDIMEV 185


>gi|302865909|ref|YP_003834546.1| ribosome recycling factor [Micromonospora aurantiaca ATCC 27029]
 gi|315502466|ref|YP_004081353.1| ribosome recycling factor [Micromonospora sp. L5]
 gi|302568768|gb|ADL44970.1| ribosome recycling factor [Micromonospora aurantiaca ATCC 27029]
 gi|315409085|gb|ADU07202.1| ribosome recycling factor [Micromonospora sp. L5]
          Length = 185

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K++   +RTGR + +M   + ++ YGS  PL Q+A++ V EPRM+
Sbjct: 6   LLEAEEKMERAIEHAKEEFGGIRTGRANAAMFSRIVIDYYGSPTPLPQMASIAVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   + ++E+ I +S+LG NP  EG  LRI +P+ TEERR  ++KVA    E++K
Sbjct: 66  IIKPYDNSQLGAMEKAIRDSDLGANPNNEGNQLRIVLPQMTEERRRDMIKVARQKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + L +  K G+  ED     E ++  +T   +  +D   + K+ E++  
Sbjct: 126 VAVRNIRRKAKEELDRLVKDGEVGEDEGRRAEKELDDLTQRFVAGVDELVKHKESELLEV 185


>gi|312866459|ref|ZP_07726677.1| ribosome recycling factor [Streptococcus downei F0415]
 gi|311098153|gb|EFQ56379.1| ribosome recycling factor [Streptococcus downei F0415]
          Length = 185

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +    +R   +   L ++   +R GR + S+LD ++V+ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IDKANERFKHSHEALGREFSAIRAGRANASLLDRIEVDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKNSIKEIERAINESDLGINPANDGSVIRLVIPALTEETRKDLAKEVKKLGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K  + +ED + SLE DIQK TD  +K IDS   EK+KE++  
Sbjct: 126 VAIRNIRRDAMDDAKKQEKDKEITEDELKSLEKDIQKATDDAVKKIDSMTNEKEKELLTV 185


>gi|303240826|ref|ZP_07327339.1| ribosome recycling factor [Acetivibrio cellulolyticus CD2]
 gi|302591714|gb|EFL61449.1| ribosome recycling factor [Acetivibrio cellulolyticus CD2]
          Length = 185

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 121/179 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++I+++M  TI+ LK ++  +R GR +P++LD + V+ YG+  P+NQ+A+V+V E R+++
Sbjct: 7   KSIEEKMKKTINVLKDELTGVRAGRANPAILDKLTVDYYGTPTPINQIASVSVPEGRVIM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  W+ +M+  +E+ I +S++G+NP  +G+V+R+  P  TEERR  L KV   Y E +K+
Sbjct: 67  IQPWEAKMIKEIEKEIQKSDIGINPNNDGKVIRLVFPMLTEERRKELTKVVKKYGEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++R IRRDG++H+K  +K G+ +ED + + E DIQ +TD  I  ID   E K  EI+  
Sbjct: 127 AIRAIRRDGIEHMKTLKKDGELTEDDLKTAEKDIQNMTDKYIAEIDKVVELKDAEILEV 185


>gi|119477105|ref|ZP_01617341.1| ribosome releasing factor [marine gamma proteobacterium HTCC2143]
 gi|119449468|gb|EAW30706.1| ribosome releasing factor [marine gamma proteobacterium HTCC2143]
          Length = 185

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ ++RM  T+  L   +  +RTGR  PS+LD ++V  YGS  PL+Q+A + V + R L 
Sbjct: 7   QDAQERMQKTLVALGGALNKIRTGRAHPSILDGLRVNYYGSETPLSQLAAINVEDARTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K +V  VER I +S+LGLNP   G V+RIP+P  TEE R    + A   AE S++
Sbjct: 67  VVPWEKAIVPDVERAIMKSDLGLNPSTAGTVIRIPMPMLTEETRRGFTRQAKKEAEHSRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD +  +K  +K  + SED     ++DIQK+TD  +  I+     K+ ++M  
Sbjct: 127 SIRNIRRDVIADIKDLQKEKEISEDQERKAQDDIQKLTDRFVGEIEVILSAKEADLMEI 185


>gi|322392100|ref|ZP_08065562.1| ribosome recycling factor [Streptococcus peroris ATCC 700780]
 gi|321145000|gb|EFX40399.1| ribosome recycling factor [Streptococcus peroris ATCC 700780]
          Length = 185

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHHSLAREFGGIRAGRANASLLDRITVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED + +LE +IQK TD  +K+ID     K+KEI+  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKEIQKATDDAVKHIDDMTANKEKEILEV 185


>gi|322385103|ref|ZP_08058750.1| ribosome recycling factor [Streptococcus cristatus ATCC 51100]
 gi|321270727|gb|EFX53640.1| ribosome recycling factor [Streptococcus cristatus ATCC 51100]
          Length = 185

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ++++T+ E R+L
Sbjct: 6   VEKAKERMTHSHQSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQLSSITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERAINASDLGITPSSDGSVIRLVIPALTEETRRELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K+ + +ED +  LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKAKEITEDELKVLEKDIQKVTDDAVKHIDDMTATKEKELLEV 185


>gi|225077039|ref|ZP_03720238.1| hypothetical protein NEIFLAOT_02091 [Neisseria flavescens
           NRL30031/H210]
 gi|224951596|gb|EEG32805.1| hypothetical protein NEIFLAOT_02091 [Neisseria flavescens
           NRL30031/H210]
          Length = 185

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK ++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSLEVLKDNLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFESNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SVRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLAAKEEDLMAI 185


>gi|168494373|ref|ZP_02718516.1| ribosome recycling factor [Streptococcus pneumoniae CDC3059-06]
 gi|183575679|gb|EDT96207.1| ribosome recycling factor [Streptococcus pneumoniae CDC3059-06]
          Length = 185

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHHSLAREFGAIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLEV 185


>gi|209885087|ref|YP_002288944.1| ribosome recycling factor [Oligotropha carboxidovorans OM5]
 gi|254809524|sp|B6JH69|RRF_OLICO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|209873283|gb|ACI93079.1| ribosome recycling factor [Oligotropha carboxidovorans OM5]
          Length = 183

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 95/182 (52%), Positives = 125/182 (68%), Gaps = 4/182 (2%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+ ++K RM      L+ ++  LRTGR + SML+ V+VEAYGSH+PLNQVA V+V EPR
Sbjct: 6   FDINDLKRRMDGAKESLRYELGGLRTGRAAISMLEPVQVEAYGSHMPLNQVATVSVPEPR 65

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK MV +VE  I  SNLGLNP  EGQV+R+ +PE  EERR  LVKVAH YAE 
Sbjct: 66  LLSVQVWDKSMVKAVETAIVNSNLGLNPATEGQVIRLRIPELNEERRKELVKVAHKYAEA 125

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++++VR++RRDG+D +KK     K SED       +IQK+TD+ I +ID     K+KEI+
Sbjct: 126 ARVAVRHVRRDGLDIVKK----DKMSEDEQERASGEIQKVTDAAIADIDKLLATKEKEIL 181

Query: 185 HF 186
             
Sbjct: 182 TV 183


>gi|225873898|ref|YP_002755357.1| ribosome recycling factor [Acidobacterium capsulatum ATCC 51196]
 gi|225791980|gb|ACO32070.1| ribosome recycling factor [Acidobacterium capsulatum ATCC 51196]
          Length = 195

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q +K RM   +   +  + +LRTGR S  MLD ++V+ YG+  PLNQV  V   + + +V
Sbjct: 17  QQLKTRMDKAVKDFQTQLTSLRTGRASVQMLDQIRVDYYGTPTPLNQVGQVNTPDAQSIV 76

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WD  ++  +E  +  S+LG NP  +G+++RIPVP  TEERR  +VK  +   E+ + 
Sbjct: 77  VQPWDTSILKDIENALRTSDLGFNPQNDGKIIRIPVPPMTEERRREVVKHLNKVLEEHRT 136

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            VRNIRRDG D +KK+ K    SED      +++QK+TD  IK ++    +K+ EIM  
Sbjct: 137 GVRNIRRDGNDAIKKAAKDKLISEDEEKRSLDEMQKLTDEEIKRMEEISRKKEAEIMQV 195


>gi|254392087|ref|ZP_05007276.1| ribosome recycling factor [Streptomyces clavuligerus ATCC 27064]
 gi|326443741|ref|ZP_08218475.1| ribosome recycling factor [Streptomyces clavuligerus ATCC 27064]
 gi|197705763|gb|EDY51575.1| ribosome recycling factor [Streptomyces clavuligerus ATCC 27064]
          Length = 185

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA   AE SK
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRRDYIKVAKGKAEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R++RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 126 ISIRSVRRKAKEAIDKLVKDGEVGEDEGRRGEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|146298338|ref|YP_001192929.1| ribosome recycling factor [Flavobacterium johnsoniae UW101]
 gi|190360242|sp|A5FMF6|RRF_FLAJO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146152756|gb|ABQ03610.1| ribosome recycling factor [Flavobacterium johnsoniae UW101]
          Length = 187

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 73/188 (38%), Positives = 117/188 (62%), Gaps = 3/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M + ID  L++ ++ M  +I+ L+K+ + +R G+ SP+ML  V V+ YGS  PL+QV+ +
Sbjct: 1   MTEEIDFILESTEESMNGSIAHLEKEFLNIRAGKASPAMLGGVFVDYYGSATPLSQVSKI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +V + R + +  ++K M+ ++E+ I  +N+G NP+  G V+ I VP  TEERR  L K A
Sbjct: 61  SVPDARTITLQPFEKNMLQAIEKAILIANIGFNPMNNGDVIIISVPPLTEERRRDLAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            + AE +KI +RN+R+D    +KK  K G  SED+  S E ++Q +T++ IK ID     
Sbjct: 121 KSEAEDAKIGIRNVRKDANTDIKKLEKEG-TSEDICKSAEEEVQNLTNTYIKKIDELLAA 179

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 180 KEAEIMKV 187


>gi|256390730|ref|YP_003112294.1| ribosome recycling factor [Catenulispora acidiphila DSM 44928]
 gi|256356956|gb|ACU70453.1| ribosome recycling factor [Catenulispora acidiphila DSM 44928]
          Length = 185

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D+  +RTGR +P+M   +  + YGS  PL+Q+A+  V + RM+
Sbjct: 6   LLEAEEKMDKAVEVAKEDLSGVRTGRANPAMFSKLTADYYGSPTPLSQMASFQVQDARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK  + ++ER I +S+LG+NP  +G V+R+  P+ TEERR   +KVA    E +K
Sbjct: 66  VIAPYDKTALGAIERSIRDSDLGVNPSSDGVVIRVVFPQLTEERRKEYIKVAKTKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ISVRNIRR   + L K  K G A ED V   E  + ++T      ID   + K+ E++  
Sbjct: 126 ISVRNIRRHSKESLDKLAKDGDAGEDDVRRAEKHLDELTQKHTAQIDEMLKHKEAELLEV 185


>gi|319957835|ref|YP_004169098.1| ribosome recycling factor [Nitratifractor salsuginis DSM 16511]
 gi|319420239|gb|ADV47349.1| ribosome recycling factor [Nitratifractor salsuginis DSM 16511]
          Length = 185

 Score =  230 bits (588), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            +  +D M  +I  +K+D  TLRTG+V+  ++D +KV+ YG+  PLNQV NVTV +   +
Sbjct: 6   FEETRDHMDKSIEAMKRDFATLRTGKVTTQIVDNIKVDYYGTPTPLNQVGNVTVTDATTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K M+ ++E+ I E+N+G+NP  +G  +++  P  T E+R  +VK A   AEK+K
Sbjct: 66  AINPWEKSMLPAIEKAIQEANIGVNPNNDGDFIKLFFPPMTVEQRQEIVKQAKQMAEKAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+R++  + +K+     + SED +    + IQK+TD  I  +D   + K+ +I+  
Sbjct: 126 VAIRNVRKESNNKIKRLEHDKEISEDEMKRALDQIQKLTDEFIAKVDESLKAKEADILRV 185


>gi|171780175|ref|ZP_02921079.1| hypothetical protein STRINF_01963 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281523|gb|EDT46958.1| hypothetical protein STRINF_01963 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 185

 Score =  230 bits (588), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   + S L ++   +R GR + S+LD ++VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFEQSHSSLAREFAAIRAGRANASLLDRIQVEYYGAMTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +E  I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSLKDIEHAINASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED +  LE DIQK TD  +K+ID+    K+KE++  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKVLEKDIQKATDEAVKHIDAMTANKEKELLEV 185


>gi|239982586|ref|ZP_04705110.1| ribosome recycling factor [Streptomyces albus J1074]
          Length = 186

 Score =  230 bits (588), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 7   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +D   + ++E+ I +S+LG+NP  +G+++R+  PE TEERR   +KVA   AE SK
Sbjct: 67  VVTPFDSSALRNIEQAIRDSDLGVNPSNDGRIIRVSFPELTEERRREFIKVAKGKAEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R +RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 127 ISIRAVRRKAKETIDKLVKDGEVGEDEGRRGEKELDDTTAKYVAQVDELLKHKEAELLEV 186


>gi|169350431|ref|ZP_02867369.1| hypothetical protein CLOSPI_01199 [Clostridium spiroforme DSM 1552]
 gi|169292751|gb|EDS74884.1| hypothetical protein CLOSPI_01199 [Clostridium spiroforme DSM 1552]
          Length = 181

 Score =  230 bits (588), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 115/180 (63%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    +RMG TI   K+D+ T+RTGR +P+MLD V V  YGS  P+NQ+A ++V+E R L
Sbjct: 6   LDEASERMGKTIDSFKRDLTTVRTGRANPAMLDRVMVNYYGSPTPINQMAGISVVEGRQL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E GI+E+ LGL P  +G+++RI VP  TE+RR    K    +AE +K
Sbjct: 66  VIKPYDKSVIKDIEHGIYEAELGLTPQNDGEIIRIMVPALTEDRRREFAKQVWKFAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D +KK       SED + + +  +QK+TD  +K ID   + K+KEIM  
Sbjct: 126 VSIRNIRRDSNDEIKKV----DGSEDEIKAGQEKVQKLTDKFVKEIDEIAKVKEKEIMTV 181


>gi|294012399|ref|YP_003545859.1| ribosome recycling factor RF-4 [Sphingobium japonicum UT26S]
 gi|292675729|dbj|BAI97247.1| ribosome recycling factor RF-4 [Sphingobium japonicum UT26S]
          Length = 185

 Score =  230 bits (588), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 94/180 (52%), Positives = 124/180 (68%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  +++ RM   +  LK D+  LRTGR +  +LD V VE YG+H+PLNQVA V+  EPR
Sbjct: 4   YDKADLERRMAGAVESLKGDLSGLRTGRANIQLLDPVTVEVYGAHMPLNQVATVSAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ML V VWDK  V  V++ I  + LGLNPIV+GQ LR+P+P+ TEERR  L K+A  YAE 
Sbjct: 64  MLSVQVWDKSNVGPVDKAIRSAGLGLNPIVDGQTLRLPIPDLTEERRKELAKLASKYAEG 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++I+VRN+RRDGMD LK   K G+ SED     E ++QK+TDSTI +ID+    K+KEI+
Sbjct: 124 ARIAVRNVRRDGMDSLKTDEKKGEISEDERKRKETEVQKLTDSTIADIDAATAAKEKEIL 183


>gi|239631340|ref|ZP_04674371.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301066628|ref|YP_003788651.1| ribosome recycling factor [Lactobacillus casei str. Zhang]
 gi|239525805|gb|EEQ64806.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439035|gb|ADK18801.1| Ribosome recycling factor [Lactobacillus casei str. Zhang]
          Length = 185

 Score =  230 bits (587), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 79/185 (42%), Positives = 118/185 (63%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQ+ID    K  MG T   L++++  +R GR + S+L+ + VE YG+  PLNQ+A +T+ 
Sbjct: 3   NQIID--QAKVNMGKTEESLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPR+L VS +DK  + ++E  ++ S+LG+NP  +G V+R+ +P+ T ERR  + K    Y
Sbjct: 61  EPRVLQVSPYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKY 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +E +KI+VRNIRR+G+D LK+  K G  +ED +  LE D+QK TD   K ID     K+K
Sbjct: 121 SESAKIAVRNIRREGLDKLKRQEKDGDITEDDLHRLEKDMQKATDDATKRIDEIAAAKEK 180

Query: 182 EIMHF 186
           EI   
Sbjct: 181 EITEV 185


>gi|167750047|ref|ZP_02422174.1| hypothetical protein EUBSIR_01015 [Eubacterium siraeum DSM 15702]
 gi|167657068|gb|EDS01198.1| hypothetical protein EUBSIR_01015 [Eubacterium siraeum DSM 15702]
 gi|291530445|emb|CBK96030.1| ribosome recycling factor [Eubacterium siraeum 70/3]
          Length = 184

 Score =  230 bits (587), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 70/186 (37%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  VI+    KD+MG  ++ ++ +  ++R GR +P++LD V V+ YG    +N +A V V
Sbjct: 1   MKDVIN--TAKDKMGKCVAAVETEYASIRAGRANPAVLDKVTVDYYGVPTQINAMAAVAV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV++ WD   + S+E+ I  S++G+ P  +G+ +RI  P+ TEERR  L K    
Sbjct: 59  SEARVLVITPWDASTLKSIEKAILASDIGITPTNDGKAIRITFPQLTEERRKELCKQVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ K++VRN+RRD M+  K  +K+ + +ED + + E D+QK+TD     +D+    K+
Sbjct: 119 IAEEGKVAVRNVRRDAMEKFKAMKKNNEITEDDLKNCEKDVQKLTDKYCDEMDAACSAKE 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMTV 184


>gi|154484746|ref|ZP_02027194.1| hypothetical protein EUBVEN_02463 [Eubacterium ventriosum ATCC
           27560]
 gi|149734594|gb|EDM50511.1| hypothetical protein EUBVEN_02463 [Eubacterium ventriosum ATCC
           27560]
          Length = 184

 Score =  230 bits (587), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 75/176 (42%), Positives = 112/176 (63%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +D+M  +++ L ++  T+R GR +P +LD +K++ YG+  PL QV NV+V E RM+ +  
Sbjct: 9   EDKMEKSLANLGEEYATIRAGRANPHILDKIKIDYYGTPTPLQQVGNVSVPEARMICIQP 68

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WD  ++  +E  I+ S++G+NP  +G+V+R+  PE TE+RR  LVK      E +KI++R
Sbjct: 69  WDASILKDIEHAINMSDVGINPTNDGKVIRLVFPELTEDRRKELVKDVKKKGENAKIAIR 128

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           NIRRD +D +KK  K    SED V   ++D+QK TD  IK ID   EEK  EIM  
Sbjct: 129 NIRRDAIDAIKKKGKEDGISEDEVKGYQDDVQKKTDEYIKKIDVAIEEKSNEIMTV 184


>gi|116512953|ref|YP_811860.1| ribosome recycling factor [Lactococcus lactis subsp. cremoris SK11]
 gi|123320141|sp|Q02WC5|RRF_LACLS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116108607|gb|ABJ73747.1| ribosome recycling factor [Lactococcus lactis subsp. cremoris SK11]
          Length = 185

 Score =  230 bits (587), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 76/185 (41%), Positives = 125/185 (67%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+++     ++RM  +++ L++D+  LR GR + S+LD V+V  YG+  PLNQ+A++T+ 
Sbjct: 3   NEIV--TTAQERMKHSLASLQRDLGHLRAGRANASLLDRVQVVYYGAPTPLNQLASITIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+V+ +DK ++  +E+ ++ES+LG+ P  +G V+R+ +P  TEERR  LVK    Y
Sbjct: 61  EARVLMVTPFDKSILKDIEKSLYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKY 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E +K+++RNIRRD MD  KKS K+ + +ED +  LEN+IQK+TD  +K  D     K+K
Sbjct: 121 IESAKVAIRNIRRDAMDTAKKSEKAKEITEDDLKDLENEIQKVTDDAVKEADRLASVKEK 180

Query: 182 EIMHF 186
           E++  
Sbjct: 181 ELLDI 185


>gi|225856606|ref|YP_002738117.1| ribosome recycling factor [Streptococcus pneumoniae P1031]
 gi|254809536|sp|C1CK29|RRF_STRZP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|225725685|gb|ACO21537.1| ribosome recycling factor [Streptococcus pneumoniae P1031]
          Length = 185

 Score =  230 bits (587), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG  P  +G V+R+ VP  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDLGNTPANDGSVIRLVVPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLEV 185


>gi|241760709|ref|ZP_04758801.1| ribosome recycling factor [Neisseria flavescens SK114]
 gi|241318890|gb|EER55416.1| ribosome recycling factor [Neisseria flavescens SK114]
          Length = 185

 Score =  230 bits (587), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK ++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSLEVLKDNLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFESNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLAAKEEDLMAI 185


>gi|304316875|ref|YP_003852020.1| ribosome recycling factor [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778377|gb|ADL68936.1| ribosome recycling factor [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 184

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+N +++M  +I+ LK ++M++R GR +P++LD + ++ YG+  P+N++A +T  EP+++
Sbjct: 5   LKNTEEKMKKSIAVLKNELMSIRAGRANPALLDRISIDYYGTMTPINKLATITAPEPKVI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD   ++ +E+ I +S+L +NP  +G+++R+  P+ TEERR  LVK+ H   E+++
Sbjct: 65  IIQPWDTSKISEIEKAIQKSDLNINPTSDGKIIRLVFPDLTEERRKELVKLVHKKGEEAR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRRD  D +KK  K+G+ SED     E  +QK+TD  IK ID   E+K+KEIM F
Sbjct: 125 VAVRQIRRDANDIIKKMDKNGEISEDEKLKSEESVQKLTDKYIKEIDKILEQKEKEIMEF 184


>gi|255283877|ref|ZP_05348432.1| ribosome recycling factor [Bryantella formatexigens DSM 14469]
 gi|255265598|gb|EET58803.1| ribosome recycling factor [Bryantella formatexigens DSM 14469]
          Length = 183

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++   ++M  T + L  +   +R GR +P +LD + V+ YG+  P+ QV NV V E RM+
Sbjct: 5   MKVYDEKMTKTYNNLLAEFGAIRAGRANPHVLDRIMVDYYGTPTPIQQVGNVNVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD  M+ ++ + I  S+LG+NP  +G+V+R+  PE TEERR  LVK      E +K
Sbjct: 65  QIQPWDTSMLKAITKAIQTSDLGINPTNDGRVIRLVFPELTEERRKDLVKEVKKKGEGAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D  KK  K    SED +  LEN +QK+TD  +K+IDS  EEK KEIM  
Sbjct: 125 VAVRNIRRDANDAFKKL-KGTDVSEDTIKELENAMQKLTDKYMKDIDSAVEEKSKEIMTV 183


>gi|291454429|ref|ZP_06593819.1| ribosome recycling factor [Streptomyces albus J1074]
 gi|291357378|gb|EFE84280.1| ribosome recycling factor [Streptomyces albus J1074]
          Length = 185

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +D   + ++E+ I +S+LG+NP  +G+++R+  PE TEERR   +KVA   AE SK
Sbjct: 66  VVTPFDSSALRNIEQAIRDSDLGVNPSNDGRIIRVSFPELTEERRREFIKVAKGKAEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R +RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 126 ISIRAVRRKAKETIDKLVKDGEVGEDEGRRGEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|255325237|ref|ZP_05366343.1| ribosome recycling factor [Corynebacterium tuberculostearicum
           SK141]
 gi|311739711|ref|ZP_07713546.1| ribosome recycling factor [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|255297802|gb|EET77113.1| ribosome recycling factor [Corynebacterium tuberculostearicum
           SK141]
 gi|311305527|gb|EFQ81595.1| ribosome recycling factor [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 185

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 71/178 (39%), Positives = 115/178 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             ++ M  ++   ++ ++T+RTGR +P+M + +  E YG   P+ Q+A ++V EPRML++
Sbjct: 8   EAEEHMTASVEHTREQLVTIRTGRANPTMFNGLVAEYYGVPTPITQMATISVPEPRMLLI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +++ M+  +E  I  S+LG+NP  +GQVLR+ VP+ TEERR  +VK+A +  E  KI+
Sbjct: 68  KPYEQSMIHEIENSIRNSDLGVNPTNDGQVLRVTVPQLTEERRKEMVKLAKSKGEDGKIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRR  M+ LKK +K G A ED V + E +++KIT   I+ +D   E K+ E+M  
Sbjct: 128 IRNIRRKAMEQLKKLQKDGDAGEDEVIAAEKEMEKITSGYIEQVDKLVENKENELMEV 185


>gi|313115645|ref|ZP_07801101.1| ribosome recycling factor [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622031|gb|EFQ05530.1| ribosome recycling factor [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 184

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 72/181 (39%), Positives = 117/181 (64%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           + +  +D+M  ++  L +++  +R GR +P++LD V V+ YG+  P+ QVA+V V E R 
Sbjct: 4   NTKVYEDKMKSSVEHLGRELGAVRAGRANPAVLDKVSVDYYGAPTPIQQVASVAVAEART 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L ++ WD+ ++  + + I  S++G+ PI +G  +R+  P  TEERR  L K      E++
Sbjct: 64  LTITPWDRTLLRPISKAIMASDVGITPIDDGSTIRLNFPAPTEERRKQLAKEVSKLGEEA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K++VRNIRR+ MD  K  +K+G+ +ED   ++E D+QK+TD  IKNID+  EEK+KEIM 
Sbjct: 124 KVAVRNIRREAMDKAKAMKKAGELTEDSQKTMEEDVQKLTDKYIKNIDAAVEEKQKEIMS 183

Query: 186 F 186
            
Sbjct: 184 V 184


>gi|313896240|ref|ZP_07829793.1| ribosome recycling factor [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320529259|ref|ZP_08030351.1| ribosome recycling factor [Selenomonas artemidis F0399]
 gi|312975039|gb|EFR40501.1| ribosome recycling factor [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|320138889|gb|EFW30779.1| ribosome recycling factor [Selenomonas artemidis F0399]
          Length = 185

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +  M   I  L+++  +LR GR +P++LD V V  YG+   +NQ+A VTV EP M+
Sbjct: 6   LSKHETSMTKAIESLRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ W+K ++  +E  I +S+LGL+P  +G V+R+ +P+ T+ERR  L+K      E++K
Sbjct: 66  VITPWEKSVLHDIEIAISKSDLGLSPNSDGNVIRLAIPQPTQERRKELIKTVGKKTEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  + +KK  K  + +ED     +  +QK+ D  +K ++     K+KE+M  
Sbjct: 126 VALRNIRRDANEAIKKLEKDKEINEDESKRGQESVQKLVDKFVKQMEEMRAAKEKEVMEI 185


>gi|226497262|ref|NP_001150478.1| ribosome recycling factor [Zea mays]
 gi|195639534|gb|ACG39235.1| ribosome recycling factor [Zea mays]
          Length = 264

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              K++M   I  ++ +  T+RTGR +P+MLD ++VE YG+ V L  +A ++  +   L+
Sbjct: 86  DQAKEKMEKAIETVQANFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQISTPDATSLL 145

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK  +  +E+ I  +NLG+ P  +G+V+R+ VP  T +RR  L K     AE  K+
Sbjct: 146 IQPYDKSSLKLIEKTIVAANLGVTPSNDGEVIRVTVPPLTSDRRKELSKTVAKLAEDGKV 205

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +    K  K  K SED V  L  D+QK+TD  +K I+S  ++K++E+M  
Sbjct: 206 AIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKVTDEYMKKIESIQKQKEQELMKI 264


>gi|193215251|ref|YP_001996450.1| ribosome recycling factor [Chloroherpeton thalassium ATCC 35110]
 gi|193088728|gb|ACF14003.1| ribosome recycling factor [Chloroherpeton thalassium ATCC 35110]
          Length = 187

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 83/180 (46%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + RM  +I  ++ +   +RTG+ S  +LD +KVEAYG  +PL QV NV  L+ R L
Sbjct: 8   LSDAESRMQKSIENVRHEFAAIRTGKASAGLLDGIKVEAYGQAMPLKQVGNVGTLDSRTL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWDK MVA+VE+ I +SNLGLNP  +GQ +RIPVP  TEERR   VKV    AE+ K
Sbjct: 68  TVQVWDKGMVATVEKAIRDSNLGLNPATDGQTIRIPVPPLTEERRKEYVKVTKKQAEEGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD    + K  K    +ED  A  + DI  +T    K++D    +K+KEIM  
Sbjct: 128 VAVRNIRRDANHAIDKLEKEKLITEDEKARAKKDIDNLTHKYEKSLDELTSKKEKEIMEV 187


>gi|319638835|ref|ZP_07993593.1| ribosome-recycling factor [Neisseria mucosa C102]
 gi|317399739|gb|EFV80402.1| ribosome-recycling factor [Neisseria mucosa C102]
          Length = 185

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSLEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M + VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFESNMASKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLAAKEEDLMAI 185


>gi|238022655|ref|ZP_04603081.1| hypothetical protein GCWU000324_02564 [Kingella oralis ATCC 51147]
 gi|237865858|gb|EEP66994.1| hypothetical protein GCWU000324_02564 [Kingella oralis ATCC 51147]
          Length = 185

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + +M  ++  LK+++  +RTGR    +LD V+V+ YGS VP++QVANVT+L+ R + 
Sbjct: 7   KSAESKMQRSLEVLKENLAKVRTGRAHTGLLDQVEVDYYGSAVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V V++  M A+VE+ I +SNLGLNP   G V+R+P+P  TEERR  L+KV  + AE  ++
Sbjct: 67  VKVYESNMAAAVEKAIRDSNLGLNPAAMGDVIRVPMPMLTEERRKDLIKVVRSEAEDGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  IQK+TD  I  +D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAIQKLTDKAIAEVDKILAAKEEDLMAI 185


>gi|126736320|ref|ZP_01752062.1| ribosome recycling factor [Roseobacter sp. CCS2]
 gi|126714141|gb|EBA11010.1| ribosome recycling factor [Roseobacter sp. CCS2]
          Length = 187

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 85/182 (46%), Positives = 122/182 (67%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D  ++  RM   I+ L+ ++ +LRTGR S SML+ V V+AYGS  P+NQV  V V EPR
Sbjct: 7   LDTDDLTRRMEGAIANLRVELASLRTGRASGSMLEPVMVDAYGSMTPINQVGTVNVPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  Y E 
Sbjct: 67  MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAGQYGES 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RN+RRDGMD +KK++  G  SED     E+ +Q++TD+ IK +D   E K+ EIM
Sbjct: 127 ARVSIRNLRRDGMDKIKKAKTDG-LSEDDQKFWESTVQEVTDAHIKIVDETIESKQAEIM 185

Query: 185 HF 186
             
Sbjct: 186 QV 187


>gi|307330053|ref|ZP_07609204.1| ribosome recycling factor [Streptomyces violaceusniger Tu 4113]
 gi|306884314|gb|EFN15349.1| ribosome recycling factor [Streptomyces violaceusniger Tu 4113]
          Length = 185

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE TE+RR   +KVA A  E +K
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEQRRKEFIKVAKAKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R++RR   + + K  K G   ED     E ++   T   +  +D   + K+ E++  
Sbjct: 126 ISIRSVRRKAKESIDKLIKDGDVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|262202045|ref|YP_003273253.1| ribosome recycling factor [Gordonia bronchialis DSM 43247]
 gi|262085392|gb|ACY21360.1| ribosome recycling factor [Gordonia bronchialis DSM 43247]
          Length = 185

 Score =  230 bits (587), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  K DM ++RTGR +P+M + V +E YG+  P+ QVA++   EPR++
Sbjct: 6   LFDAEEKMEKAVSVAKDDMGSIRTGRANPAMFNKVVIEYYGAMTPVTQVASINTPEPRLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   +  +E  I  S+LG+NP  +G V+R+ VP+ TEERR  LVK A    E +K
Sbjct: 66  VIKPYEASTLRDIETAIRNSDLGVNPTNDGNVIRVAVPQLTEERRRDLVKQAKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR  +D LK+ +K G+A ED V   E ++ K T   ++ +D   + K+ E++  
Sbjct: 126 VSIRNIRRKAVDELKRIQKDGEAGEDEVTRAEKELDKTTAGYVQQVDELVKHKENELLEV 185


>gi|282898680|ref|ZP_06306668.1| Ribosome recycling factor [Cylindrospermopsis raciborskii CS-505]
 gi|281196548|gb|EFA71457.1| Ribosome recycling factor [Cylindrospermopsis raciborskii CS-505]
          Length = 182

 Score =  230 bits (587), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 64/177 (36%), Positives = 106/177 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +  M  T+   ++   ++RTGR + S+LD V+V+ YGS   L  +AN+T  +   +
Sbjct: 3   LAEAESTMNKTVEATQRAFNSIRTGRANASLLDKVQVDYYGSPTSLKSLANITTPDATTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  +  VE+ I  S++GL P  +G V+R+ +P  T +RR  LVK+A  YAE+ +
Sbjct: 63  LIQPYDRTSLNIVEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKELVKLAAKYAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           + +RNIRRD +D ++K  K+G+ SED     ++ +QKIT      ID    EK+K+I
Sbjct: 123 VGIRNIRRDALDSIRKQEKAGEVSEDESRDQQDKLQKITSKYTAKIDELLAEKEKDI 179


>gi|330720188|gb|EGG98575.1| Ribosome recycling factor [gamma proteobacterium IMCC2047]
          Length = 185

 Score =  230 bits (587), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +  L      +RTGR   S+LD V V  YGS  PLNQVAN++V + R L+
Sbjct: 7   KDAEQRMEKALVALGAAFNRIRTGRAHASILDSVSVTYYGSETPLNQVANISVDDGRTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K M+  VE+ I +SNLGLNP+  G ++RIP+P  TEE R  LVK A A AE++++
Sbjct: 67  ISPWEKPMIPEVEKAILKSNLGLNPVTTGDIIRIPMPALTEETRKDLVKQAKAEAEQARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVR++RRD    +K+ +K  + SED      ++IQKITD  I  I+  F  K+ ++   
Sbjct: 127 SVRSVRRDANSDIKELQKEKEISEDEERKASDEIQKITDKYIAKIEEAFTAKEADLKEI 185


>gi|261379562|ref|ZP_05984135.1| ribosome recycling factor [Neisseria subflava NJ9703]
 gi|284798036|gb|EFC53383.1| ribosome recycling factor [Neisseria subflava NJ9703]
          Length = 185

 Score =  230 bits (587), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK ++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSLEVLKDNLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M + VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV  + AE+ ++
Sbjct: 67  VKPFESNMASKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRSEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLAAKEEDLMAI 185


>gi|89900777|ref|YP_523248.1| ribosome recycling factor [Rhodoferax ferrireducens T118]
 gi|122479258|sp|Q21WY6|RRF_RHOFD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|89345514|gb|ABD69717.1| ribosome recycling factor [Rhodoferax ferrireducens T118]
          Length = 186

 Score =  230 bits (587), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
             ++ +M  +I   K ++  +RTGR +P++LD V V+ YG+ +P++QVANV++L+ R + 
Sbjct: 8   NTVEGKMDQSIEAFKHNLTKIRTGRANPALLDTVHVDYYGAMLPISQVANVSLLDARTIS 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K M A +E+ I +S+LGLNP   G ++R+P+P  +EERR  L KV     E +KI
Sbjct: 68  VQPWEKGMGAKIEKAIRDSDLGLNPSSMGDLIRVPMPAMSEERRKELSKVVRGEGEGAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  + ++K+ K   ASED     E DIQK+TD  +  ID     K+++IM  
Sbjct: 128 AIRNLRRDANEAIRKAVKDKLASEDEQKRCETDIQKVTDRHVIVIDQLVAAKEQDIMAV 186


>gi|328946695|gb|EGG40833.1| ribosome recycling factor [Streptococcus sanguinis SK1087]
          Length = 185

 Score =  230 bits (587), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTHSHQSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERALNASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTANKEKELLEV 185


>gi|291459117|ref|ZP_06598507.1| ribosome recycling factor [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418371|gb|EFE92090.1| ribosome recycling factor [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 184

 Score =  229 bits (586), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 72/175 (41%), Positives = 107/175 (61%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  T   L  ++ T+R GR +P +LD + V+ YG+  PL QV N++V E RML +  W
Sbjct: 10  EKMHKTHDNLMSELATIRAGRANPHVLDRITVDYYGTQTPLQQVGNISVPEARMLQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK M+  +E+ I+ S+LG+NP  +G  +R+  PE TEERR  L K      E +K+++RN
Sbjct: 70  DKGMLKEIEKAINLSDLGINPTNDGNTIRLVFPELTEERRRELTKEVKKKGEAAKVAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IRRD M+  KK  K+ + +ED ++    DIQ +TD  I+ ID   E K KE+M  
Sbjct: 130 IRRDAMELAKKLEKNSEITEDDLSRQTKDIQDLTDHMIEKIDRSVEAKNKELMTV 184


>gi|224368820|ref|YP_002602981.1| ribosome recycling factor [Desulfobacterium autotrophicum HRM2]
 gi|259494538|sp|C0QB20|RRF_DESAH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|223691536|gb|ACN14819.1| Frr [Desulfobacterium autotrophicum HRM2]
          Length = 185

 Score =  229 bits (586), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +DRM  ++  L+K+M  +RTGR S +MLD VKV+ YG+  PLNQ+A++ + E RM+ 
Sbjct: 7   KETRDRMVKSVKTLEKEMTRVRTGRASMTMLDGVKVDYYGTLTPLNQMASIAIPESRMIT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WD   +  VE+GI ++N+GL P  +G+++RI +P  TE+RR  + K  H   E+ K+
Sbjct: 67  VQPWDISAIKEVEKGILKANIGLTPSSDGKIIRITIPPLTEDRRREIAKTVHNTCEEFKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  D LK  +K G  SED     + ++Q ITD  IK I++ F  K+KEI+  
Sbjct: 127 AVRNIRRDSNDTLKSLQKDGDISEDENFKAQKEVQDITDEFIKQIEAVFAAKEKEILEL 185


>gi|15895066|ref|NP_348415.1| ribosome recycling factor [Clostridium acetobutylicum ATCC 824]
 gi|22001946|sp|Q97I63|RRF_CLOAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|15024762|gb|AAK79755.1|AE007688_4 Ribosome recycling factor [Clostridium acetobutylicum ATCC 824]
 gi|325509204|gb|ADZ20840.1| ribosome recycling factor [Clostridium acetobutylicum EA 2018]
          Length = 185

 Score =  229 bits (586), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ ++++M  +IS LKK++ +++ GR +P+MLD ++V+ YG+  PLNQ+AN++V E R+L
Sbjct: 6   IKELEEKMTKSISALKKELTSMKAGRANPAMLDRIEVDYYGTMTPLNQLANISVPESRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  + S+E+ I  S+LGLNP  +G  +R+ +PE TEE R  +VK      E  K
Sbjct: 66  MIQPWDKSAMKSIEKAILISDLGLNPSNDGTTMRLVIPELTEETRKNIVKNVKKAGEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R IRRD  D +K  +K    +ED + S ENDIQK TDS +K ID   E K+KEIM  
Sbjct: 126 VALRAIRRDANDKVKSLKKDNSITEDEMKSAENDIQKKTDSYVKEIDKMVEAKEKEIMSI 185


>gi|322388009|ref|ZP_08061616.1| ribosome recycling factor [Streptococcus infantis ATCC 700779]
 gi|321141282|gb|EFX36780.1| ribosome recycling factor [Streptococcus infantis ATCC 700779]
          Length = 185

 Score =  229 bits (586), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHHSLSREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKTSLKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  +K+ID     K+KE++  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKATDDAVKHIDDMTANKEKELLEV 185


>gi|116495065|ref|YP_806799.1| ribosome recycling factor [Lactobacillus casei ATCC 334]
 gi|191638568|ref|YP_001987734.1| ribosome recycling factor [Lactobacillus casei BL23]
 gi|227534923|ref|ZP_03964972.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|122263518|sp|Q038L5|RRF_LACC3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238693049|sp|B3WES5|RRF_LACCB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116105215|gb|ABJ70357.1| ribosome recycling factor [Lactobacillus casei ATCC 334]
 gi|190712870|emb|CAQ66876.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Lactobacillus casei BL23]
 gi|227187679|gb|EEI67746.1| ribosome recycling factor [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|327382607|gb|AEA54083.1| Ribosome recycling factor, RRF [Lactobacillus casei LC2W]
 gi|327385804|gb|AEA57278.1| Ribosome recycling factor, RRF [Lactobacillus casei BD-II]
          Length = 185

 Score =  229 bits (586), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 78/185 (42%), Positives = 118/185 (63%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQ+ID    K  MG T   L++++  +R GR + S+L+ + VE YG+  PLNQ+A +T+ 
Sbjct: 3   NQIID--QAKVNMGKTEESLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPR+L VS +DK  + ++E  ++ S+LG+NP  +G V+R+ +P+ T ERR  + K    Y
Sbjct: 61  EPRVLQVSPYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKY 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +E +KI++RNIRR+G+D LK+  K G  +ED +  LE D+QK TD   K ID     K+K
Sbjct: 121 SESAKIAIRNIRREGLDKLKRQEKDGDITEDDLHRLEKDMQKATDDATKRIDEIAAAKEK 180

Query: 182 EIMHF 186
           EI   
Sbjct: 181 EITEV 185


>gi|262283030|ref|ZP_06060797.1| ribosome-recycling factor [Streptococcus sp. 2_1_36FAA]
 gi|262261282|gb|EEY79981.1| ribosome-recycling factor [Streptococcus sp. 2_1_36FAA]
          Length = 185

 Score =  229 bits (586), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMSHSHQSLAREFGAVRAGRANASLLDRISVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERAINASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKIGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTAHKEKELLEV 185


>gi|332670031|ref|YP_004453039.1| ribosome recycling factor [Cellulomonas fimi ATCC 484]
 gi|332339069|gb|AEE45652.1| ribosome recycling factor [Cellulomonas fimi ATCC 484]
          Length = 185

 Score =  229 bits (586), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K D  T+RTGR + +M   V V+ YGS  PL Q+A+  V E R +
Sbjct: 6   LLEAEEKMDKAVEVAKDDFATIRTGRANAAMFSKVFVDYYGSPTPLQQLASFNVTEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +DK    ++E+ + +S+LG+NP  +G V+R+ +P  TEERR   VK+A A AE ++
Sbjct: 66  LVSPFDKSSTTAIEKALRDSDLGVNPTNDGNVIRVVLPALTEERRRDFVKLAKAKAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVR++RR   + L +  K G+A ED V   E +++ +T   ++ ID     K+ E++  
Sbjct: 126 VSVRSVRRKAKEELDRIVKDGEAGEDEVVRAEKELEALTKKHVETIDHLLASKESELLEV 185


>gi|304384860|ref|ZP_07367206.1| ribosome recycling factor [Pediococcus acidilactici DSM 20284]
 gi|304329054|gb|EFL96274.1| ribosome recycling factor [Pediococcus acidilactici DSM 20284]
          Length = 186

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 65/184 (35%), Positives = 119/184 (64%), Gaps = 2/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N++  L+  +++M      L++D+ ++R GR + S+LD V V+ YG+  PLNQ+A++++ 
Sbjct: 4   NEI--LKTAEEKMHKAHQALERDLGSIRAGRANASLLDRVTVDYYGAPTPLNQMASISIP 61

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPR+L+++ +DK ++  +E+ +  ++LG+NP  +G  +R+ +P+ TEE R  L K   A 
Sbjct: 62  EPRVLLITPYDKSVLNDIEQALLVADLGINPANDGSAIRLVIPQLTEETRKELAKDVKAE 121

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            EK K+++RN+RR+ M+ LKK+ K+G  ++D    LE   Q ITD  I+ ++     K+K
Sbjct: 122 GEKGKVAIRNVRREAMEALKKAHKNGDYNDDEFHDLEKQAQDITDKAIRKVEEIVANKEK 181

Query: 182 EIMH 185
           E++ 
Sbjct: 182 EVLE 185


>gi|238926718|ref|ZP_04658478.1| peptide chain release factor RF4 [Selenomonas flueggei ATCC 43531]
 gi|238885250|gb|EEQ48888.1| peptide chain release factor RF4 [Selenomonas flueggei ATCC 43531]
          Length = 185

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ M   I  L+++  +LR GR +P++LD V V  YG+   +NQ+A VTV EP M+
Sbjct: 6   LSKHEENMNKAIDVLRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ W+K ++  +E  I +S+LGL+P  +G V+R+ +P+ T+ERR  L+K      E++K
Sbjct: 66  VITPWEKAILHEIEIAISKSDLGLSPNSDGNVIRLAIPQPTQERRKELIKTVGKKTEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  + +KK  K  + +ED     ++ +QK+ D  +K +D     K+KE+M  
Sbjct: 126 VALRNIRRDANEAIKKLEKDKEINEDESKRGQDSVQKLVDKFVKQMDEMRTAKEKEVMEI 185


>gi|227833383|ref|YP_002835090.1| Ribosome recycling factor [Corynebacterium aurimucosum ATCC 700975]
 gi|262184370|ref|ZP_06043791.1| ribosome recycling factor [Corynebacterium aurimucosum ATCC 700975]
 gi|254809506|sp|C3PH48|RRF_CORA7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|227454399|gb|ACP33152.1| Ribosome recycling factor [Corynebacterium aurimucosum ATCC 700975]
          Length = 185

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 68/178 (38%), Positives = 115/178 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             ++ M  ++   ++ ++T+RTGR +P+M + +  E YG   P+ Q+A ++V EPRML++
Sbjct: 8   EAEEHMTASVEHTREQLLTIRTGRANPAMFNGLVAEYYGVPTPITQMATISVPEPRMLLI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +++ ++  +E  I  S+LG+NP  +GQVLR+ +P+ TEERR  +VK+A +  E  KI+
Sbjct: 68  KPYEQSVMNEIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRRDMVKMAKSKGEDGKIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRR  M+ LKK +K G A ED V + E +++KIT   I+ +D     K++E+M  
Sbjct: 128 IRNIRRRAMEQLKKLQKDGDAGEDEVIAAEKEMEKITSGYIEQVDKLVANKEEELMEV 185


>gi|168483015|ref|ZP_02707967.1| ribosome recycling factor [Streptococcus pneumoniae CDC1873-00]
 gi|172043555|gb|EDT51601.1| ribosome recycling factor [Streptococcus pneumoniae CDC1873-00]
 gi|332201410|gb|EGJ15480.1| ribosome recycling factor [Streptococcus pneumoniae GA47368]
          Length = 185

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 116/186 (62%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  VI ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+
Sbjct: 1   MANVI-IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+V+ +DK  +  +ER ++ S LG+ P  +G V+R+ +P  TEE R  L K    
Sbjct: 60  PEARVLLVTPFDKSSLKDIERALNASELGITPANDGSVIRLVIPALTEETRRDLAKEVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+
Sbjct: 120 VGENAKVAVRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKE 179

Query: 181 KEIMHF 186
           KE++  
Sbjct: 180 KELLEV 185


>gi|37519857|ref|NP_923234.1| ribosome recycling factor [Gloeobacter violaceus PCC 7421]
 gi|39932053|sp|Q7NNX0|RRF_GLOVI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|35210848|dbj|BAC88229.1| ribosome releasing factor [Gloeobacter violaceus PCC 7421]
          Length = 182

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 107/179 (59%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +++   +  M   I     +  T+RTGR S S+LD + VE YG   PL  +A +T  +  
Sbjct: 1   MNVSKTEQDMRKAIEATAGNFATIRTGRASTSLLDRINVEYYGQPTPLKTLATITTPDAS 60

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            +++  +D   +  +E+ I ES+LGL P  +G+ +R+ +P  T ERR  LVKV    AE+
Sbjct: 61  TVLIQPYDPSSLRLIEKTILESDLGLPPSNDGKTIRLNIPPLTAERRKDLVKVLRNLAEE 120

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +++VRNIRR  +D ++K  K  K SED    L++++QK+TD +I+ I+  FE K+KEI
Sbjct: 121 GRVAVRNIRRHAIDEVRKEEKDAKVSEDEARRLQDEVQKLTDKSIQQIEKLFEAKEKEI 179


>gi|327470583|gb|EGF16039.1| ribosome recycling factor [Streptococcus sanguinis SK330]
          Length = 185

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTHSHQSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERALNASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTANKEKELLEV 185


>gi|158338603|ref|YP_001519780.1| ribosome recycling factor [Acaryochloris marina MBIC11017]
 gi|158308844|gb|ABW30461.1| ribosome recycling factor [Acaryochloris marina MBIC11017]
          Length = 173

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 64/170 (37%), Positives = 100/170 (58%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +I  +K+ + T+RTGR + S+LD + VE YG+  PL  +A ++  +   + +  +D 
Sbjct: 1   MQKSIEAMKRSLNTIRTGRANASLLDRITVEYYGTETPLRSLATISTPDASTITIQPFDP 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +ER I  S++GL P  +G  +R+ +P  TEERR   VK+A   AE+ K+++RNIR
Sbjct: 61  SSLTDIERSISLSDVGLVPNNDGSAIRLNIPPLTEERRKDFVKMAGKIAEEGKVAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RD +D  +K  KSG  SED    L++ IQ +TD     +D    EK+ EI
Sbjct: 121 RDAIDTARKQGKSGDISEDESKDLQDKIQGLTDKYTGQVDKILAEKETEI 170


>gi|125718424|ref|YP_001035557.1| ribosome recycling factor [Streptococcus sanguinis SK36]
 gi|323351162|ref|ZP_08086818.1| ribosome recycling factor [Streptococcus sanguinis VMC66]
 gi|166231520|sp|A3CPA2|RRF_STRSV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|125498341|gb|ABN45007.1| Ribosome recycling factor, putative [Streptococcus sanguinis SK36]
 gi|322122386|gb|EFX94097.1| ribosome recycling factor [Streptococcus sanguinis VMC66]
 gi|324991441|gb|EGC23374.1| ribosome recycling factor [Streptococcus sanguinis SK353]
 gi|324993795|gb|EGC25714.1| ribosome recycling factor [Streptococcus sanguinis SK405]
 gi|324994886|gb|EGC26799.1| ribosome recycling factor [Streptococcus sanguinis SK678]
 gi|325687319|gb|EGD29341.1| ribosome recycling factor [Streptococcus sanguinis SK72]
 gi|325690743|gb|EGD32744.1| ribosome recycling factor [Streptococcus sanguinis SK115]
 gi|325694795|gb|EGD36700.1| ribosome recycling factor [Streptococcus sanguinis SK150]
 gi|325696189|gb|EGD38080.1| ribosome recycling factor [Streptococcus sanguinis SK160]
 gi|327460953|gb|EGF07286.1| ribosome recycling factor [Streptococcus sanguinis SK1057]
 gi|327463069|gb|EGF09390.1| ribosome recycling factor [Streptococcus sanguinis SK1]
 gi|327474670|gb|EGF20075.1| ribosome recycling factor [Streptococcus sanguinis SK408]
 gi|327490228|gb|EGF22016.1| ribosome recycling factor [Streptococcus sanguinis SK1058]
 gi|332358733|gb|EGJ36556.1| ribosome recycling factor [Streptococcus sanguinis SK355]
 gi|332359004|gb|EGJ36825.1| ribosome recycling factor [Streptococcus sanguinis SK49]
 gi|332367318|gb|EGJ45053.1| ribosome recycling factor [Streptococcus sanguinis SK1059]
          Length = 185

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTHSHQSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERALNASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTANKEKELLEV 185


>gi|186686172|ref|YP_001869368.1| ribosome recycling factor [Nostoc punctiforme PCC 73102]
 gi|238691203|sp|B2IVW4|RRF_NOSP7 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|186468624|gb|ACC84425.1| ribosome recycling factor [Nostoc punctiforme PCC 73102]
          Length = 182

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 110/177 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  ++   ++   T+RTGR + S+LD V V+ YGS  PL  +AN++  +   +
Sbjct: 3   LADAKSKMQSSVESTQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +++  +  +E+ I  S++GL P  +G V+R+ +P  T +RR   VK+A  YAE+ +
Sbjct: 63  LIQPYERNTLNIIEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKMATKYAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD +D ++K  K+ + S+D     ++++QK+T+     ID+   EK+K+I
Sbjct: 123 VAIRNIRRDAIDSIRKQEKASEISKDESKDQQDNLQKLTNEYTSRIDALLAEKEKDI 179


>gi|297191773|ref|ZP_06909171.1| ribosome recycling factor [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197721709|gb|EDY65617.1| ribosome recycling factor [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 185

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM 
Sbjct: 6   LLEAEEKMEKAVLVAKDDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ +DK  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE +K
Sbjct: 66  VVTPFDKTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTQDRRKEYIKVAKTKAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R++RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 126 ISIRSVRRKAKETIDKLIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|332523063|ref|ZP_08399315.1| ribosome recycling factor [Streptococcus porcinus str. Jelinkova
           176]
 gi|332314327|gb|EGJ27312.1| ribosome recycling factor [Streptococcus porcinus str. Jelinkova
           176]
          Length = 185

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 75/185 (40%), Positives = 115/185 (62%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N +ID      R   +   L ++  ++R GR + S+LD ++V+ YG+  PLNQ++++TV 
Sbjct: 3   NAIID--KANQRFEQSFQSLSREYASIRAGRANASLLDRIQVDYYGAPTPLNQLSSITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L++S +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K     
Sbjct: 61  EARVLLISPFDKNSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKNLAKEVKKV 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E  K+++RNIRRD MD  KK  K  + SED + +LE DIQK TD  IK+ID+   EK+K
Sbjct: 121 GENQKVAIRNIRRDAMDEAKKQEKDKEISEDELKTLEKDIQKATDDAIKHIDAMTAEKEK 180

Query: 182 EIMHF 186
           E++  
Sbjct: 181 ELLSV 185


>gi|255029475|ref|ZP_05301426.1| ribosome recycling factor [Listeria monocytogenes LO28]
          Length = 182

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/177 (42%), Positives = 120/177 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI
Sbjct: 126 VAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEI 182


>gi|322411286|gb|EFY02194.1| ribosome recycling factor [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 185

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   +   L ++  ++R GR + S+LD ++++ YG+  PLNQ+A++TV E R+L
Sbjct: 6   IETAKERFAQSHHSLSREYASIRAGRANASLLDRIQIDYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  IK ID    EK+KE++  
Sbjct: 126 ISIRNIRRDAMDDAKKQEKAKEITEDELKTLEKDIQKATDDAIKEIDRMTAEKEKELLSV 185


>gi|260575886|ref|ZP_05843881.1| ribosome recycling factor [Rhodobacter sp. SW2]
 gi|259021812|gb|EEW25113.1| ribosome recycling factor [Rhodobacter sp. SW2]
          Length = 188

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 84/182 (46%), Positives = 124/182 (68%), Gaps = 1/182 (0%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL  I+ RM   +  L+ +  +LRTGR S S+L+ + V+AYG   P+NQ+  V V EPR
Sbjct: 8   IDLDAIQRRMDGALHALRTEFGSLRTGRASASILEPIHVDAYGQMTPINQLGTVNVPEPR 67

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+V++VWDK MV  VER I +S +G+NP+V+G ++R+P+PE  EERR  L KVA  YAE 
Sbjct: 68  MVVINVWDKAMVQKVERAIRDSGIGINPVVDGPLIRLPIPELNEERRAQLSKVAAHYAET 127

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++++RN+RRDGMD +KK++ +G  +ED       ++Q +TD  I N+D   E K++EIM
Sbjct: 128 ARVAIRNVRRDGMDQIKKAKAAG-MAEDDQKMWSEEVQDLTDKAIANVDRTLELKQQEIM 186

Query: 185 HF 186
             
Sbjct: 187 QV 188


>gi|291550817|emb|CBL27079.1| ribosome recycling factor [Ruminococcus torques L2-14]
          Length = 183

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 116/186 (62%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+   + +  D+M  TI+ L  ++ T+R GR +P +LD + V+ YG+  P+ QVANV+V
Sbjct: 1   MNEKNKIYD--DKMTKTINNLDGELATIRAGRANPHVLDKLAVDYYGTPTPIQQVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+K M+ ++E+ I  S++G+NP  +G  +R+  PE TE+RR  L K    
Sbjct: 59  PEARMIQIQPWEKSMLKAIEKAILTSDIGINPTNDGTSIRLVFPELTEDRRKELAKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++K++VRN+RRDG    KK  K  + SED +  LE+++QKITD  +  ID   E K 
Sbjct: 119 KGEEAKVAVRNVRRDGNVAFKKL-KGTEISEDEIKDLEDELQKITDKYVAKIDKMVEAKS 177

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 178 KEIMTV 183


>gi|15900824|ref|NP_345428.1| ribosome recycling factor [Streptococcus pneumoniae TIGR4]
 gi|111658056|ref|ZP_01408758.1| hypothetical protein SpneT_02000789 [Streptococcus pneumoniae
           TIGR4]
 gi|182683889|ref|YP_001835636.1| ribosome releasing factor [Streptococcus pneumoniae CGSP14]
 gi|303254412|ref|ZP_07340518.1| ribosome recycling factor [Streptococcus pneumoniae BS455]
 gi|303259855|ref|ZP_07345830.1| ribosome releasing factor [Streptococcus pneumoniae SP-BS293]
 gi|303262269|ref|ZP_07348213.1| ribosome releasing factor [Streptococcus pneumoniae SP14-BS292]
 gi|303264691|ref|ZP_07350609.1| ribosome releasing factor [Streptococcus pneumoniae BS397]
 gi|303267220|ref|ZP_07353085.1| ribosome releasing factor [Streptococcus pneumoniae BS457]
 gi|303269506|ref|ZP_07355271.1| ribosome releasing factor [Streptococcus pneumoniae BS458]
 gi|22001947|sp|Q97R82|RRF_STRPN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238691154|sp|B2IPA0|RRF_STRPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|14972420|gb|AAK75068.1| ribosome recycling factor [Streptococcus pneumoniae TIGR4]
 gi|182629223|gb|ACB90171.1| ribosome releasing factor [Streptococcus pneumoniae CGSP14]
 gi|302598579|gb|EFL65619.1| ribosome recycling factor [Streptococcus pneumoniae BS455]
 gi|302636592|gb|EFL67083.1| ribosome releasing factor [Streptococcus pneumoniae SP14-BS292]
 gi|302639060|gb|EFL69520.1| ribosome releasing factor [Streptococcus pneumoniae SP-BS293]
 gi|302640942|gb|EFL71324.1| ribosome releasing factor [Streptococcus pneumoniae BS458]
 gi|302643229|gb|EFL73511.1| ribosome releasing factor [Streptococcus pneumoniae BS457]
 gi|302645778|gb|EFL76007.1| ribosome releasing factor [Streptococcus pneumoniae BS397]
          Length = 185

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S++G+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDIGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAVRNIRRDAMDEAKKREKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLEV 185


>gi|226322655|ref|ZP_03798173.1| hypothetical protein COPCOM_00427 [Coprococcus comes ATCC 27758]
 gi|225208992|gb|EEG91346.1| hypothetical protein COPCOM_00427 [Coprococcus comes ATCC 27758]
          Length = 183

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 119/186 (63%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+ + + +  ++M  TI  L  ++ ++R GR +P++L+ + VE YG+  P+ QVAN++V
Sbjct: 1   MNEKLKIYD--EKMQKTIHALDTELASIRAGRANPNILNKLTVEYYGTPTPIQQVANISV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  W+K+++  +E+ I  S++G+NP  +G V+R+  PE TEERR  LVK    
Sbjct: 59  PEARMIQIQPWEKKIIKDIEKAILMSDIGINPTNDGTVIRLVFPELTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E SK++VRNIRRDG D  KK  K    SED +  LE+ IQK+TD  IK +D+  + K 
Sbjct: 119 KGEASKVAVRNIRRDGNDAFKKL-KGTDVSEDEIQDLEDQIQKLTDKYIKEVDAAVDAKS 177

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 178 KEVMTV 183


>gi|326693032|ref|ZP_08230037.1| ribosome recycling factor [Leuconostoc argentinum KCTC 3773]
          Length = 181

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 77/182 (42%), Positives = 121/182 (66%), Gaps = 3/182 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D+ + K RM      L++++ ++RTGR +P +LD ++VE YG+  PLNQVA+++V E R
Sbjct: 3   FDITDAKARMQGAQDALQRELGSIRTGRANPRILDRIEVEYYGAMTPLNQVASISVPEAR 62

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L+++ +DK ++  + R I+ S+LGLNP  +G ++R+ +P+ TEE R  L K   A AEK
Sbjct: 63  ILLITPFDKSVLDEIIRAINMSDLGLNPASDGNIVRLAIPQMTEEGRKELAKQVKAEAEK 122

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+SVRN+RRD MD +K   K  +  ED+    E+ IQK+TD  IK ID+   EK+KE++
Sbjct: 123 AKVSVRNVRRDAMDSVK---KDKELPEDVARKAEDAIQKLTDDNIKAIDAIAAEKEKELL 179

Query: 185 HF 186
             
Sbjct: 180 TI 181


>gi|317125390|ref|YP_004099502.1| ribosome recycling factor [Intrasporangium calvum DSM 43043]
 gi|315589478|gb|ADU48775.1| ribosome recycling factor [Intrasporangium calvum DSM 43043]
          Length = 185

 Score =  229 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 59/178 (33%), Positives = 102/178 (57%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             +++M   +  LK+D   +RTGR +P + + + V  YG+  PL Q+A+    EPR ++V
Sbjct: 8   EAEEKMDKAVEVLKEDFAGIRTGRANPGLFNKLLVNYYGAPTPLQQLASFQNPEPRTILV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +DK  +  +E+ I +S+LG+NP  +G  +R  +PE TE+RR   +K+AH  AE+ ++S
Sbjct: 68  VPFDKSAMHEIEKAIRDSDLGVNPASDGHQIRCVMPELTEQRRKEYIKLAHHKAEEGRVS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RN+RR     + +  K G   ED  A  E +++ +T      IDS  + K+ E++  
Sbjct: 128 IRNVRRKAKTDIDRLVKDGDVGEDEGARAEKELEALTKKHTDLIDSLVKHKESELLEV 185


>gi|317969623|ref|ZP_07971013.1| ribosome recycling factor [Synechococcus sp. CB0205]
          Length = 179

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 60/178 (33%), Positives = 107/178 (60%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           +++  M  ++   ++   T+RTGR + S+LD ++VE YG+  PL  +A ++  +   + +
Sbjct: 2   DLEASMRKSVDSTQRTFNTIRTGRANASLLDKIQVEYYGADTPLKSLATISTPDSSTIQL 61

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   +  +E+ I  S+LGL    +G+++RI +P  TE+RR  L K+A  YAE+ K++
Sbjct: 62  QPFDGSSLGLIEKAISMSDLGLTCNNDGKLIRINIPPLTEDRRKELCKLAAKYAEEGKVA 121

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RN+RRD +D +KK  K G+ SED     ++ +QK+TD  I  I+    EK+ +I+  
Sbjct: 122 LRNVRRDAIDKVKKQEKEGEFSEDQSRDEQDKVQKLTDKFIAEIEKLLAEKEADILKV 179


>gi|167756899|ref|ZP_02429026.1| hypothetical protein CLORAM_02448 [Clostridium ramosum DSM 1402]
 gi|167703074|gb|EDS17653.1| hypothetical protein CLORAM_02448 [Clostridium ramosum DSM 1402]
          Length = 193

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 116/180 (64%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM  TI   ++D+ ++RTGR +P+MLD V V  YGS  P+NQ+A ++V+E R L
Sbjct: 18  LDDTNERMTKTIESFQRDLSSVRTGRANPNMLDRVMVNYYGSPTPVNQIAGISVVEGRQL 77

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E GI+E++LGL P  +G+++RI VP  TEERR    K    +AE +K
Sbjct: 78  VIKPYDKSSIKDIEHGIYEADLGLTPQNDGEIIRIMVPALTEERRKEFAKNVWKFAENAK 137

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD  D +KK+      SED + + +  +QK+TD  +K ID   + K+K+IM  
Sbjct: 138 VSIRNIRRDSNDEIKKT----DGSEDEIKAGQERVQKLTDKFVKEIDEIAKVKEKDIMTV 193


>gi|67459519|ref|YP_247143.1| ribosome recycling factor [Rickettsia felis URRWXCal2]
 gi|75536074|sp|Q4UKF3|RRF_RICFE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|67005052|gb|AAY61978.1| Ribosome recycling factor [Rickettsia felis URRWXCal2]
          Length = 186

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 86/186 (46%), Positives = 125/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+     +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++ 
Sbjct: 1   MDTETLKKNLQEKMDKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLST 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH 
Sbjct: 61  PDARTINVQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRKELVKLAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E +KIS+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K+
Sbjct: 121 YGEDTKISLRNIRRDGNEELKKLEKDNIIAKDEHHSLSEQVQKLTDDYSSKVDSAIKQKE 180

Query: 181 KEIMHF 186
           +EIM  
Sbjct: 181 QEIMTV 186


>gi|297568948|ref|YP_003690292.1| ribosome recycling factor [Desulfurivibrio alkaliphilus AHT2]
 gi|296924863|gb|ADH85673.1| ribosome recycling factor [Desulfurivibrio alkaliphilus AHT2]
          Length = 184

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 80/186 (43%), Positives = 125/186 (67%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++VI    + D+M  +I   ++++  +RTGR S S+LD VKVEAYGS +PLNQVA +T+
Sbjct: 1   MDEVI--LEMSDKMEKSIEAYRRELSRIRTGRASLSLLDGVKVEAYGSSMPLNQVATLTI 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+V+  WD + V+++E+ IH S++GL P  +G+V+R+ +P+ TEERR  +VK    
Sbjct: 59  PESRMIVIQPWDAQQVSAIEKAIHASDIGLTPNSDGKVIRLMIPQLTEERRKEMVKQVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E+ +++VRN RR+ +D LKK +   +  ED    L+++ Q+ TD  IK IDS   EK+
Sbjct: 119 ISEEYRVAVRNSRREAIDTLKKLKNDKQLPEDDFFRLQDEAQQETDRFIKQIDSIMAEKE 178

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 179 KEMMEV 184


>gi|302542189|ref|ZP_07294531.1| ribosome recycling factor [Streptomyces hygroscopicus ATCC 53653]
 gi|302459807|gb|EFL22900.1| ribosome recycling factor [Streptomyces himastatinicus ATCC 53653]
          Length = 185

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 59/174 (33%), Positives = 103/174 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM V++ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVITPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE TE+RR   +KVA    E +KIS+R+I
Sbjct: 72  KSALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEQRRKEFIKVAKGKGEDAKISIRSI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   + + K  K G+  ED     E ++  +T   +  +D   + K+ E++  
Sbjct: 132 RRKAKESIDKLIKDGEVGEDEGRRAEKELDDLTAKYVAQVDELLKHKEAELLEV 185


>gi|7388105|sp|P82231|RRFC_SPIOL RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
 gi|4689034|emb|CAB41419.1| chloroplast ribosome recycling factor protein [Spinacia oleracea]
          Length = 271

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 69/178 (38%), Positives = 113/178 (63%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N K RM  TI  ++ +  ++RT R SP+MLD ++VE YG+ V L  +A ++  +   L++
Sbjct: 94  NTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLI 153

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S +DK  + ++E+ I  S LG++P  +G+V+R+ +P  T +RR  L KV    AE+ K++
Sbjct: 154 SPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVA 213

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIRRD +   +K  K  K SED V  L  D+QK+TD  +K ++S +++K++E+M  
Sbjct: 214 VRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 271


>gi|313667490|ref|YP_004047774.1| ribosome recycling factor [Neisseria lactamica ST-640]
 gi|309379113|emb|CBX22244.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313004952|emb|CBN86379.1| ribosome recycling factor [Neisseria lactamica 020-06]
          Length = 185

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFEGNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLTAKEEDLMAV 185


>gi|84498386|ref|ZP_00997183.1| ribosome recycling factor [Janibacter sp. HTCC2649]
 gi|84381886|gb|EAP97769.1| ribosome recycling factor [Janibacter sp. HTCC2649]
          Length = 185

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 104/180 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K +   +RTGR  PSM + V V+ YG+  PL Q+A+    E R +
Sbjct: 6   LLEAEEKMDKAVEVAKDNFAAIRTGRAHPSMFNKVIVDYYGAPTPLQQLASFQTPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  + ++E+ + +++LG+NP  +G ++R  +P+ TEERR   +K+A   AE +K
Sbjct: 66  LISPFDKGAMNNIEKALRDADLGVNPSNDGNIIRCILPQLTEERRKEYIKMARGQAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR   + +++  K G   ED  +  E D++  T   +  ID   + K+ E++  
Sbjct: 126 VAIRNVRRTAKESIERLVKDGDVGEDEGSRAEKDLESTTKKYVDTIDEVLKGKETELLEV 185


>gi|303232806|ref|ZP_07319491.1| ribosome recycling factor [Atopobium vaginae PB189-T1-4]
 gi|302481292|gb|EFL44367.1| ribosome recycling factor [Atopobium vaginae PB189-T1-4]
          Length = 181

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 108/186 (58%), Gaps = 5/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++  D    K  M   IS LK +   +RTGR +P +LD +KV+ YG   P+ Q+A + V
Sbjct: 1   MSEYTDF--AKSHMTRAISALKTNFSKVRTGRANPQVLDGIKVDYYGQPTPILQLAGIKV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP +L V  WDK  + ++E+ I  S+LG+ P  +G  +R+P P+ T++RRL LVK    
Sbjct: 59  PEPTVLAVEPWDKSSLKAIEKAIEASDLGITPSNDGVTIRLPFPKPTQQRRLELVKECKQ 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE +K+++RN RRD      K+ +  + SED V+  +  IQKITD  I  +D   + K 
Sbjct: 119 YAEDAKVAIRNARRDANG---KAERDEELSEDGVSREKKAIQKITDDFIAQVDELLKTKS 175

Query: 181 KEIMHF 186
            E+M  
Sbjct: 176 AEVMEI 181


>gi|284107227|ref|ZP_06386368.1| ribosome recycling factor [Candidatus Poribacteria sp. WGA-A3]
 gi|283829974|gb|EFC34253.1| ribosome recycling factor [Candidatus Poribacteria sp. WGA-A3]
          Length = 186

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +  +M   +  LKK++ ++R  R S S+ D +KV+ YG+   L QV ++++ + R++
Sbjct: 7   IDALSQKMDGALDHLKKELGSIRGSRASLSLFDHIKVDYYGTPTALQQVGSLSMPDSRLI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD   +  +E+ I  S+LGLNP  +G+V+RIP+P  +EERR   VKV   Y E++K
Sbjct: 67  MIQPWDPTSIKDIEKSILSSDLGLNPSNDGKVIRIPIPALSEERRKEFVKVCRKYGEETK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +R IRR+G D LK+ +K    +ED +   E  IQKI D  IK +D   ++K++EI+  
Sbjct: 127 IHIRGIRREGNDELKRLQKDATITEDDLRRGEATIQKIVDGKIKLVDELLKKKEEEILEI 186


>gi|77164329|ref|YP_342854.1| ribosome recycling factor [Nitrosococcus oceani ATCC 19707]
 gi|254434229|ref|ZP_05047737.1| ribosome recycling factor [Nitrosococcus oceani AFC27]
 gi|123594762|sp|Q3JCX2|RRF_NITOC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|76882643|gb|ABA57324.1| ribosome recycling factor [Nitrosococcus oceani ATCC 19707]
 gi|207090562|gb|EDZ67833.1| ribosome recycling factor [Nitrosococcus oceani AFC27]
          Length = 187

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM  +++ LK+    LR  R   S+LD + V  YG++VPLNQVANV+V + R L 
Sbjct: 9   EDAAQRMDKSLNALKQAFARLRANRAHTSLLDHITVSYYGNNVPLNQVANVSVEDARTLT 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+++MV  +E+ I  S LGLNP+  G V+R+P+P  TEERR  +V++    AE +++
Sbjct: 69  VTPWERQMVPVIEKAIMTSELGLNPVTAGTVIRVPLPVLTEERRREMVRLVRQEAEAARV 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K+  K  + SED     E  IQKITD+ I  +D     K++++M  
Sbjct: 129 AMRNIRRDSNHTIKELIKEKEISEDDQRRAEEAIQKITDNHITQVDELLAVKEQDLMEV 187


>gi|330466307|ref|YP_004404050.1| ribosome recycling factor [Verrucosispora maris AB-18-032]
 gi|328809278|gb|AEB43450.1| ribosome recycling factor [Verrucosispora maris AB-18-032]
          Length = 185

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K++   +RTGR +P+M   + ++ YGS  PL Q+A+V + EPRM 
Sbjct: 6   LLEAEEKMERAVEHAKEEFGAIRTGRATPAMFSKIIIDYYGSPTPLTQMASVAIPEPRMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   + ++E+ I +S+LG+NP  EG  LRI +P+ TEERR  ++KVA    E++K
Sbjct: 66  IIKPYDNSQINAMEKAIRDSDLGVNPNNEGNQLRILLPQMTEERRRDMIKVARHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR G + L +  K G+  ED     E ++  +T   + ++D   + K+ E++  
Sbjct: 126 VAIRNIRRKGKEELDRLVKDGEVGEDDGRRAEKELDDLTQRYVAHVDELVKHKETELLEV 185


>gi|86742260|ref|YP_482660.1| ribosome recycling factor [Frankia sp. CcI3]
 gi|123723539|sp|Q2J711|RRF_FRASC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|86569122|gb|ABD12931.1| ribosome recycling factor [Frankia sp. CcI3]
          Length = 185

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +S  ++D   +RTGR++P++   + V+ YG+  P+ Q+A+  + EPRM+
Sbjct: 6   LLEAEEKMEKAVSVAREDFANIRTGRITPAVFSKILVDYYGAPTPVQQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + ++E+ + +S+LG+NP  +G ++R   PE +E+RR  LVKVA   AE+++
Sbjct: 66  IITPYDKSSLGAIEKAVRDSDLGVNPSNDGTIIRCVFPELSEQRRRDLVKVARTKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN+RR   D + +  + G A ED     E D+ + T   +  +D     K+ +++  
Sbjct: 126 VSIRNVRRHAKDTIDRIVRDGDAGEDEGRRGEKDLDEATHRYVGQVDELLRLKESDLLSV 185


>gi|226306032|ref|YP_002765992.1| ribosome recycling factor [Rhodococcus erythropolis PR4]
 gi|229491439|ref|ZP_04385263.1| ribosome recycling factor [Rhodococcus erythropolis SK121]
 gi|259494552|sp|C0ZY18|RRF_RHOE4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226185149|dbj|BAH33253.1| ribosome recycling factor [Rhodococcus erythropolis PR4]
 gi|229321724|gb|EEN87521.1| ribosome recycling factor [Rhodococcus erythropolis SK121]
          Length = 185

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K D+ ++RTGR +P M   + ++ YGS  P+ Q+A++ V E RM+
Sbjct: 6   LFEAEEKMEKAVTVAKDDLGSVRTGRANPGMFSRIVIDYYGSITPITQLASINVPEARMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  ++   + ++E  I  S+LG+NP  +G ++RI VP+ TEERR  LVK A +  E SK
Sbjct: 66  IVKPYEASQLNAIETAIRNSDLGVNPSNDGSIIRISVPQLTEERRRELVKQAKSKGEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR  MD L + +K G+A ED V   E ++ K T   +  ++   + K+ E+M  
Sbjct: 126 VTLRNIRRKAMDELGRIQKDGEAGEDEVGRAEKELDKTTAKYVHTVEELVKHKEAELMEV 185


>gi|227503382|ref|ZP_03933431.1| ribosome recycling factor [Corynebacterium accolens ATCC 49725]
 gi|306836376|ref|ZP_07469354.1| ribosome recycling factor [Corynebacterium accolens ATCC 49726]
 gi|227075885|gb|EEI13848.1| ribosome recycling factor [Corynebacterium accolens ATCC 49725]
 gi|304567736|gb|EFM43323.1| ribosome recycling factor [Corynebacterium accolens ATCC 49726]
          Length = 185

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 68/178 (38%), Positives = 115/178 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             ++ M  ++   ++ ++T+RTGR +P+M + +  E YG+  P+ Q+A ++V EPRML++
Sbjct: 8   EAEEHMTASVEHTREQLVTIRTGRANPAMFNGLIAEYYGAPTPITQMATISVPEPRMLLI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +++ M+  +E  I  S+LG+NP  +G VLR+ VP+ TEERR  +VK+A +  E  KI+
Sbjct: 68  KPYEQSMIQEIENSIRNSDLGVNPTNDGHVLRVTVPQLTEERRKEMVKLAKSKGEDGKIA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRR  M+ LKK +K G+  ED V + E +++KIT   ++ +D   E K+ E+M  
Sbjct: 128 IRNIRRKAMEQLKKLQKDGEEGEDEVLAAEKEMEKITAGYVEQVDKLVENKESELMEV 185


>gi|298489665|ref|YP_003719842.1| ribosome recycling factor ['Nostoc azollae' 0708]
 gi|298231583|gb|ADI62719.1| ribosome recycling factor ['Nostoc azollae' 0708]
          Length = 182

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 107/177 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + +M  T+   ++   T+RTGR + S+LD ++VE YGS  PL  +AN++  +   +
Sbjct: 3   LAEAESKMQKTVESTQQAFNTIRTGRANASLLDRIQVEYYGSPTPLKSLANISTPDASTI 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  +  +E+ I  S++G+ P  +G V+R+ +P  T +RR    K+A  YAE+ +
Sbjct: 63  LIQPYDRSSLNILEKAISLSDIGITPSNDGSVIRLNIPPLTSDRRKEFAKLAAKYAEEGR 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           + +RNIRRD +D ++K  K+ + SED     ++ +QK+T+   + ID    EK+K+I
Sbjct: 123 VGIRNIRRDALDSIRKQEKAAEISEDESRDQQDKLQKLTNKYTEKIDHLLTEKEKDI 179


>gi|225018404|ref|ZP_03707596.1| hypothetical protein CLOSTMETH_02351 [Clostridium methylpentosum
           DSM 5476]
 gi|224948822|gb|EEG30031.1| hypothetical protein CLOSTMETH_02351 [Clostridium methylpentosum
           DSM 5476]
          Length = 184

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +M  T+  L+ +  T+R GR +P++LD + V+ YG+   +NQ+A V+V E R+L
Sbjct: 5   LEKSESKMHKTVERLEHEYTTIRAGRANPNVLDKILVDYYGTPTQINQMAAVSVSEARIL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S WD   + ++E+ I  S+LG+NP  +G+V+RI  P+ TEERR  +VK  H   E +K
Sbjct: 65  VISPWDATSLKAIEKAIQASDLGINPTNDGKVIRIAFPQLTEERRKEIVKEVHKMREDAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  K  +K G  SED +   E  +Q + D   K ID+    K+KEIM  
Sbjct: 125 VAVRNIRRDAMDKFKAIKKEGSVSEDEIKDGEKKLQNMVDKFCKEIDNVAAGKEKEIMEI 184


>gi|307243333|ref|ZP_07525497.1| ribosome recycling factor [Peptostreptococcus stomatis DSM 17678]
 gi|306493280|gb|EFM65269.1| ribosome recycling factor [Peptostreptococcus stomatis DSM 17678]
          Length = 185

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 112/178 (62%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
            ++++M  TI  LK +  T+R GR + SMLD V+V+ YG+  P+NQ+A + V E R+L +
Sbjct: 8   QLEEQMEKTIEALKFEFGTIRAGRANASMLDKVRVDYYGTPTPVNQMAAIAVSEGRILTI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + WDK  + ++E+ I ES++G+ P  +G V+R+ VP  TEERR  L K A   +E  K+ 
Sbjct: 68  TPWDKSSIHTIEKAISESDVGIAPANDGSVIRLVVPPLTEERRKELAKKASKASESFKVR 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RN RRD  D +KK  K+G+ +ED      +++QK+TD  IK I+     K+K+IM  
Sbjct: 128 IRNDRRDANDKIKKMEKAGELAEDDAKKAIDEVQKMTDKYIKTIEELTANKEKDIMEV 185


>gi|157150295|ref|YP_001450730.1| ribosome recycling factor [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189044081|sp|A8AY70|RRF_STRGC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157075089|gb|ABV09772.1| ribosome recycling factor [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 185

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMSHSHQNLAREFGAVRAGRANASLLDRISVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERAINASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKIGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTAHKEKELLEV 185


>gi|240118875|ref|ZP_04732937.1| ribosome recycling factor [Neisseria gonorrhoeae PID1]
 gi|268604584|ref|ZP_06138751.1| ribosome recycling factor [Neisseria gonorrhoeae PID1]
 gi|268588715|gb|EEZ53391.1| ribosome recycling factor [Neisseria gonorrhoeae PID1]
          Length = 185

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKNLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKVLAAKEEDLMAV 185


>gi|152991582|ref|YP_001357304.1| ribosome recycling factor [Nitratiruptor sp. SB155-2]
 gi|166230808|sp|A6Q638|RRF_NITSB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151423443|dbj|BAF70947.1| ribosome recycling factor Frr [Nitratiruptor sp. SB155-2]
          Length = 186

 Score =  229 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ +    +D M  ++  LKKD  TLRTGRV+ ++++ +KV+ YG+  PLNQ A+V  
Sbjct: 3   LNEIYEY--ARDHMQKSLDVLKKDFNTLRTGRVTTAVVENIKVDYYGAPTPLNQAASVVA 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   +V+S WDK ++  +ER I E+N+G+NP  +G  +++  P  T E+R A  K A  
Sbjct: 61  ADATTIVISPWDKSLLGEIERAIQEANIGVNPNNDGDQIKLFFPPMTVEQREAEAKKAKQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + EK+KI++RN+RRD  D +KK  K    +ED       ++QKITD  IK +D   ++K+
Sbjct: 121 FGEKAKIAIRNVRRDANDKIKKLFKDKAITEDEEKRGLEEVQKITDEFIKKVDDLVKQKE 180

Query: 181 KEIMHF 186
           +EIM  
Sbjct: 181 QEIMKV 186


>gi|238759946|ref|ZP_04621100.1| Ribosome-recycling factor [Yersinia aldovae ATCC 35236]
 gi|238701853|gb|EEP94416.1| Ribosome-recycling factor [Yersinia aldovae ATCC 35236]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 70/166 (42%), Positives = 110/166 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L 
Sbjct: 7   KDTEVRMEKCLEAFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  LTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           S+RN+RRD  + +K   K  + SED     ++D+QK+TD+ IK +D
Sbjct: 127 SIRNVRRDANEKVKALLKDKEISEDEDRRSQDDVQKLTDAFIKKVD 172


>gi|313891920|ref|ZP_07825521.1| ribosome recycling factor [Dialister microaerophilus UPII 345-E]
 gi|329120951|ref|ZP_08249582.1| ribosome recycling factor [Dialister micraerophilus DSM 19965]
 gi|313119563|gb|EFR42754.1| ribosome recycling factor [Dialister microaerophilus UPII 345-E]
 gi|327471113|gb|EGF16567.1| ribosome recycling factor [Dialister micraerophilus DSM 19965]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 127/180 (70%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +++RM  +I  LK +  ++RTG+ SPS+LD + V+ YG+  P++QV +++V E RML
Sbjct: 6   INELRERMDKSIQALKTEFSSIRTGQASPSLLDRIFVDYYGTQTPISQVGSISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WDK ++  +E+ I +S+LGL P+ +G ++R+ +P+ TEERR  LVK+A+  AE++K
Sbjct: 66  VVQPWDKSVLKEIEKAILQSDLGLVPMNDGNLIRMAIPQLTEERRKDLVKIANKKAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRDG   LKK  K G  S+D+++  E+++Q +TD  IK ID+  E+K KEIM  
Sbjct: 126 VAIRNIRRDGNTFLKKEEKKGDISKDIISEAEDEVQDLTDIKIKEIDAVTEKKIKEIMSV 185


>gi|59802114|ref|YP_208826.1| Rrf [Neisseria gonorrhoeae FA 1090]
 gi|239997972|ref|ZP_04717896.1| ribosome recycling factor [Neisseria gonorrhoeae 35/02]
 gi|240015050|ref|ZP_04721963.1| ribosome recycling factor [Neisseria gonorrhoeae DGI18]
 gi|240017499|ref|ZP_04724039.1| ribosome recycling factor [Neisseria gonorrhoeae FA6140]
 gi|240081639|ref|ZP_04726182.1| ribosome recycling factor [Neisseria gonorrhoeae FA19]
 gi|240113920|ref|ZP_04728410.1| ribosome recycling factor [Neisseria gonorrhoeae MS11]
 gi|240116653|ref|ZP_04730715.1| ribosome recycling factor [Neisseria gonorrhoeae PID18]
 gi|240122119|ref|ZP_04735081.1| ribosome recycling factor [Neisseria gonorrhoeae PID24-1]
 gi|240124412|ref|ZP_04737368.1| ribosome recycling factor [Neisseria gonorrhoeae PID332]
 gi|240124716|ref|ZP_04737602.1| ribosome recycling factor [Neisseria gonorrhoeae SK-92-679]
 gi|240129089|ref|ZP_04741750.1| ribosome recycling factor [Neisseria gonorrhoeae SK-93-1035]
 gi|254494674|ref|ZP_05107845.1| ribosome recycling factor [Neisseria gonorrhoeae 1291]
 gi|260439588|ref|ZP_05793404.1| ribosome recycling factor [Neisseria gonorrhoeae DGI2]
 gi|268593821|ref|ZP_06127988.1| ribosome-recycling factor [Neisseria gonorrhoeae 35/02]
 gi|268597736|ref|ZP_06131903.1| ribosome-recycling factor [Neisseria gonorrhoeae FA19]
 gi|268599984|ref|ZP_06134151.1| ribosome recycling factor [Neisseria gonorrhoeae MS11]
 gi|268602321|ref|ZP_06136488.1| ribosome recycling factor [Neisseria gonorrhoeae PID18]
 gi|268683041|ref|ZP_06149903.1| ribosome recycling factor [Neisseria gonorrhoeae PID332]
 gi|268683291|ref|ZP_06150153.1| ribosome recycling factor [Neisseria gonorrhoeae SK-92-679]
 gi|268687470|ref|ZP_06154332.1| ribosome recycling factor [Neisseria gonorrhoeae SK-93-1035]
 gi|75432366|sp|Q5F5X3|RRF_NEIG1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|59719009|gb|AAW90414.1| putative ribosome recycling factor [Neisseria gonorrhoeae FA 1090]
 gi|226513714|gb|EEH63059.1| ribosome recycling factor [Neisseria gonorrhoeae 1291]
 gi|268547210|gb|EEZ42628.1| ribosome-recycling factor [Neisseria gonorrhoeae 35/02]
 gi|268551524|gb|EEZ46543.1| ribosome-recycling factor [Neisseria gonorrhoeae FA19]
 gi|268584115|gb|EEZ48791.1| ribosome recycling factor [Neisseria gonorrhoeae MS11]
 gi|268586452|gb|EEZ51128.1| ribosome recycling factor [Neisseria gonorrhoeae PID18]
 gi|268623325|gb|EEZ55725.1| ribosome recycling factor [Neisseria gonorrhoeae PID332]
 gi|268623575|gb|EEZ55975.1| ribosome recycling factor [Neisseria gonorrhoeae SK-92-679]
 gi|268627754|gb|EEZ60154.1| ribosome recycling factor [Neisseria gonorrhoeae SK-93-1035]
 gi|317165416|gb|ADV08957.1| ribosome recycling factor [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKVLAAKEEDLMAV 185


>gi|199597107|ref|ZP_03210539.1| Ribosome recycling factor [Lactobacillus rhamnosus HN001]
 gi|258508619|ref|YP_003171370.1| ribosome recycling factor [Lactobacillus rhamnosus GG]
 gi|199591911|gb|EDY99985.1| Ribosome recycling factor [Lactobacillus rhamnosus HN001]
 gi|257148546|emb|CAR87519.1| Ribosome-recycling factor [Lactobacillus rhamnosus GG]
 gi|259649926|dbj|BAI42088.1| ribosome recycling factor [Lactobacillus rhamnosus GG]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 76/185 (41%), Positives = 117/185 (63%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQ+I  +  K  MG T   L++++  +R GR + S+L+ + V+ YG+  PLNQ+A +TV 
Sbjct: 3   NQII--EQAKVNMGKTEESLQRELGNIRAGRANASLLNQITVDYYGAPTPLNQMAAITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L +S +DK  + ++E  I+ S+LG+NP  +G V+R+ +P+ T ERR  + K    +
Sbjct: 61  EARVLQISPYDKSSLKNIETAINASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKF 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +E +KI+VRNIRR+G+D LK+  K G  +ED +  LE D+QK TD   K ID     K+K
Sbjct: 121 SENAKIAVRNIRREGLDKLKRQEKDGDITEDELHRLEKDMQKATDDATKRIDEIAAAKEK 180

Query: 182 EIMHF 186
           EI   
Sbjct: 181 EITEV 185


>gi|323705413|ref|ZP_08116988.1| ribosome recycling factor [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535315|gb|EGB25091.1| ribosome recycling factor [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 184

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +++M  +I+ LK ++M++R GR +P++LD + ++ YG+  P+N++A +T  EP+++
Sbjct: 5   LKSTEEKMKKSIAVLKNELMSIRAGRANPALLDRISIDYYGTMTPINKLATITAPEPKII 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD   ++ +E+ I +S+L +NP  +G+++R+  P+ TEERR  LVK+ H   E++K
Sbjct: 65  IIQPWDTSKISEIEKAIQKSDLNINPTSDGKIIRLVFPDLTEERRKELVKLVHKKGEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRRD  D +KK  K+G+ SED     E ++QK+TD  IK ID   E+K+KEIM  
Sbjct: 125 VAVRQIRRDANDAIKKMDKNGEISEDEKLKSEENVQKLTDKYIKEIDKILEQKEKEIMEI 184


>gi|253996534|ref|YP_003048598.1| ribosome recycling factor [Methylotenera mobilis JLW8]
 gi|253983213|gb|ACT48071.1| ribosome recycling factor [Methylotenera mobilis JLW8]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N   +M  ++  LK D+  +RTGR    +LD V VE YGS V +NQVANV + + R + 
Sbjct: 7   KNADLKMQKSLEALKNDLAKVRTGRAHVGLLDHVMVEYYGSMVAVNQVANVNLGDARTIN 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++K M+A VE+ I +S+LGLNP   G ++R+P+P  TEERR  L K+     E +K+
Sbjct: 67  VQPYEKNMIAKVEKAIRDSDLGLNPATNGDLIRVPMPMLTEERRRDLTKIVRTEGEGAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD  D LKK  K    SED     ++++QK TD  +  +D   + K+ ++M  
Sbjct: 127 AIRNVRRDANDALKKLVKDKAISEDDERRAQDEVQKSTDKAVAEVDKMLQVKEADLMAV 185


>gi|160947396|ref|ZP_02094563.1| hypothetical protein PEPMIC_01330 [Parvimonas micra ATCC 33270]
 gi|158446530|gb|EDP23525.1| hypothetical protein PEPMIC_01330 [Parvimonas micra ATCC 33270]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  ++ +M  +I   + ++ T+R GR +P++LD   V+ YG+  P+ QVA+++V E R+L
Sbjct: 6   INELERKMSKSIESYETELTTVRAGRANPTILDQFTVDYYGTETPIKQVASISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD  ++  +E+ +  SNLG+ P  +G+V+R+P P  TE+RR  LVKV   Y E SK
Sbjct: 66  VIQPWDASLITPIEKVLLASNLGITPSNDGKVIRLPFPALTEDRRKELVKVVKGYGENSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RRDG+D LKK  K  + SED +   E ++QK+TD  IK ++   + K+KE+M  
Sbjct: 126 IAIRNLRRDGLDKLKKLEKDKEISEDELRQAEEEVQKVTDKFIKKVEDITKLKEKELMEI 185


>gi|289423559|ref|ZP_06425360.1| ribosome recycling factor [Peptostreptococcus anaerobius 653-L]
 gi|289156061|gb|EFD04725.1| ribosome recycling factor [Peptostreptococcus anaerobius 653-L]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 116/178 (65%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
            ++++M  TI  LK +  T+R GR + SMLD V+V+ YG+  P+NQ+A V V E R+L +
Sbjct: 8   ELEEQMEKTIEALKFEFGTIRAGRANASMLDKVRVDYYGTPTPVNQMAAVAVSEGRVLTI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + WDK ++ ++E+ I +S++G+ P  +G V+R+ VP+ TEERR  L K A+  +E  K+ 
Sbjct: 68  TPWDKSVIHAIEKAISDSDIGIAPSNDGSVIRLTVPQLTEERRKELAKKANKASESFKVR 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RN RRD  D +KK  K+ + +ED      +++QK+TD  IK ID   +EK+K+I+  
Sbjct: 128 IRNERRDANDKIKKMEKAAELTEDDAKKATDEVQKMTDKYIKVIDQLTDEKEKDILSV 185


>gi|257470869|ref|ZP_05634959.1| ribosome recycling factor (RRF) [Fusobacterium ulcerans ATCC 49185]
 gi|317065071|ref|ZP_07929556.1| ribosome Recycling Factor [Fusobacterium ulcerans ATCC 49185]
 gi|313690747|gb|EFS27582.1| ribosome Recycling Factor [Fusobacterium ulcerans ATCC 49185]
          Length = 188

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 85/179 (47%), Positives = 120/179 (67%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++  ++MG  I   K    ++R GR S SMLD VKVE YGS +PLNQV +V+  E R+L
Sbjct: 7   VKSCNEKMGKAIEATKHKFTSIRAGRASVSMLDSVKVEQYGSDMPLNQVGSVSAPEARLL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ I  +NLGL P  +G+V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 67  VIDPWDKSLISKIEKAIMAANLGLTPNNDGKVIRLVMPELTAERRKEYVKMAKTEAENGK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VRNIR+DG + LKK  K  +   SED V +LE +IQK+TD+ IK ID  F +K+KEI
Sbjct: 127 VAVRNIRKDGNNDLKKLSKDKESPISEDEVKTLEAEIQKLTDAHIKAIDDLFAKKEKEI 185


>gi|315641203|ref|ZP_07896280.1| ribosome recycling factor [Enterococcus italicus DSM 15952]
 gi|315482970|gb|EFU73489.1| ribosome recycling factor [Enterococcus italicus DSM 15952]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 120/186 (64%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I L  IK +M  T   L++++  +R GR + S+LD + V  YG+  P+NQ+A++T+
Sbjct: 1   MADAI-LNEIKTKMEKTAENLQRELGQIRAGRANASLLDRISVVYYGAPTPINQLASITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+++ +DK  +  +E+ I  S++G+NP  +G V+R+ +P+ TEERR  LVK    
Sbjct: 60  PEARILMITPFDKSTLKDIEKAILASDIGINPTSDGNVIRLVIPQLTEERRKELVKEVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +KI++RN RRDGMD  KK +K+G  +ED + + E  IQ++TD++IK +D     K+
Sbjct: 120 ETESAKIAIRNARRDGMDSYKKQQKAGDITEDDLRTSEKTIQELTDASIKELDKIAASKE 179

Query: 181 KEIMHF 186
           +E++  
Sbjct: 180 EELLEV 185


>gi|225375366|ref|ZP_03752587.1| hypothetical protein ROSEINA2194_00991 [Roseburia inulinivorans DSM
           16841]
 gi|225212855|gb|EEG95209.1| hypothetical protein ROSEINA2194_00991 [Roseburia inulinivorans DSM
           16841]
          Length = 183

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  T++ L ++  ++R GR +P +LD ++V+ YG+  P+ QVANV V EPRM+
Sbjct: 5   LVQFDEKMQKTMNNLSEEFGSIRAGRANPHVLDKLRVDYYGTPTPIQQVANVNVPEPRMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  MV  +E+ I  S+LG+NP  +G+ +R+  PE TEERR  L K      E +K
Sbjct: 65  QIQPWEASMVKEIEKVIMTSDLGINPTNDGKTIRLLFPELTEERRKDLAKDVKKKGESAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D  KK  K    SED + +LE + QK+TD  I  +D   E K KEI+  
Sbjct: 125 VAIRNIRRDANDSFKKLAKE-DVSEDEIKALEENAQKMTDKYIAAVDEAVEVKTKEILTV 183


>gi|167746791|ref|ZP_02418918.1| hypothetical protein ANACAC_01503 [Anaerostipes caccae DSM 14662]
 gi|317471594|ref|ZP_07930938.1| ribosome recycling protein [Anaerostipes sp. 3_2_56FAA]
 gi|167653751|gb|EDR97880.1| hypothetical protein ANACAC_01503 [Anaerostipes caccae DSM 14662]
 gi|316900909|gb|EFV22879.1| ribosome recycling protein [Anaerostipes sp. 3_2_56FAA]
          Length = 181

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +D+M  +   +  + M +R GR +P +LD V V+ YG   P+ QV NV+V E R +
Sbjct: 2   LKKFEDKMQKSYENMTSEFMAIRAGRANPHVLDKVTVDYYGVPTPIQQVGNVSVPEARTI 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+  ++  +E+ I  S++G+ P  +G  +R+  PE TEERR  L K      E +K
Sbjct: 62  LIQPWEPNLLGEIEKAIMMSDIGITPNNDGSAIRLNFPELTEERRKDLAKDIKKRGETTK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D LKK  K+ + ++D +   E+++QK+TD  IK ID   E K KEIM  
Sbjct: 122 VAVRNIRRDANDELKKMNKANELNDDQLKDQESEVQKLTDVYIKKIDDAVEAKSKEIMTV 181


>gi|94967292|ref|YP_589340.1| ribosome recycling factor [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549342|gb|ABF39266.1| ribosome recycling factor [Candidatus Koribacter versatilis
           Ellin345]
          Length = 195

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
              +K RM   +   +K++   RTGR S  MLD V+ E YGS +PLNQVA +TV EP+++
Sbjct: 16  FGQLKTRMEKAVDDFRKELSATRTGRASVHMLDTVQAEYYGSMMPLNQVATITVPEPQLI 75

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D   + ++E+ I   +LG+NP+ +G+++RIPVP  TE+RR  +VK  H   E+ +
Sbjct: 76  LVTPFDPSALGAIEKAIRSGDLGMNPMNDGKIIRIPVPPLTEDRRKEMVKHLHKALEEHR 135

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            ++RNIRRDG D +KK+ K  K +ED        +QK+TD  IK ++   + K+KE+M  
Sbjct: 136 TAIRNIRRDGNDFIKKTLKDKKITEDEERGTMEHLQKLTDDEIKKMEEMCKTKEKEVMTV 195


>gi|229552426|ref|ZP_04441151.1| ribosome recycling factor [Lactobacillus rhamnosus LMS2-1]
 gi|258539797|ref|YP_003174296.1| ribosome recycling factor [Lactobacillus rhamnosus Lc 705]
 gi|229314163|gb|EEN80136.1| ribosome recycling factor [Lactobacillus rhamnosus LMS2-1]
 gi|257151473|emb|CAR90445.1| Ribosome-recycling factor [Lactobacillus rhamnosus Lc 705]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/185 (40%), Positives = 117/185 (63%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQ+I  +  K  MG T   L++++  +R GR + S+L+ + V+ YG+  PLNQ+A +TV 
Sbjct: 3   NQII--EQAKVNMGKTEESLQRELGNIRAGRANASLLNQITVDYYGAPTPLNQMAAITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L +S +DK  + ++E  I+ S+LG+NP  +G V+R+ +P+ T ERR  + K    +
Sbjct: 61  EARVLQISPYDKSSLKNIETAINASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKF 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +E +KI++RNIRR+G+D LK+  K G  +ED +  LE D+QK TD   K ID     K+K
Sbjct: 121 SENAKIAIRNIRREGLDKLKRQEKDGDITEDELHRLEKDMQKATDDATKRIDEIAAAKEK 180

Query: 182 EIMHF 186
           EI   
Sbjct: 181 EITEV 185


>gi|146328643|ref|YP_001209628.1| ribosome recycling factor [Dichelobacter nodosus VCS1703A]
 gi|166230785|sp|A5EV26|RRF_DICNV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146232113|gb|ABQ13091.1| ribosome recycling factor [Dichelobacter nodosus VCS1703A]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 80/186 (43%), Positives = 114/186 (61%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M Q I L++ + RM  ++  L+ D+  +RTGR + S+LD ++VE YG+ VPL+Q ANV V
Sbjct: 1   MTQEI-LKDTQSRMKKSVQTLEADLTKIRTGRANVSLLDHIEVEYYGAMVPLSQAANVNV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L + +W+++MVA +E+ I  S+LGL P   GQ + I +P  TEERR  +VKV   
Sbjct: 60  TDHRTLSIQIWERDMVAKIEKAIINSDLGLTPNTAGQNIHINLPPLTEERRKEMVKVVKN 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++KI+VRNIRRD    L K     + SED     E +IQKITD  +  ID     K+
Sbjct: 120 EGEQAKIAVRNIRRDANQSLSKLLTQKEISEDEQRKSEEEIQKITDHFVAEIDKVLMAKE 179

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 180 KELMEL 185


>gi|261400102|ref|ZP_05986227.1| ribosome recycling factor [Neisseria lactamica ATCC 23970]
 gi|269210329|gb|EEZ76784.1| ribosome recycling factor [Neisseria lactamica ATCC 23970]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS +P++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMIPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFEGNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKLLTAKEEDLMAV 185


>gi|15673991|ref|NP_268166.1| ribosome recycling factor [Lactococcus lactis subsp. lactis Il1403]
 gi|281492614|ref|YP_003354594.1| ribosome recycling factor [Lactococcus lactis subsp. lactis KF147]
 gi|13878747|sp|Q9CE39|RRF_LACLA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|12725055|gb|AAK06107.1|AE006430_12 ribosome recycling factor [Lactococcus lactis subsp. lactis Il1403]
 gi|281376278|gb|ADA65769.1| Ribosome recycling factor [Lactococcus lactis subsp. lactis KF147]
 gi|326407547|gb|ADZ64618.1| ribosome recycling factor [Lactococcus lactis subsp. lactis CV56]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 76/185 (41%), Positives = 124/185 (67%), Gaps = 2/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+++     +DRM  ++  L++D+  +R GR + S+LD V+V  YG+  PLNQ+A++T+ 
Sbjct: 3   NEIV--TTAQDRMKQSLGSLQRDLGHIRAGRANASLLDRVQVVYYGAPTPLNQLASITIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+V+ +DK ++  +E+ ++ES+LG+ P  +G V+R+ +P  TEERR  LVK    Y
Sbjct: 61  EARVLMVTPFDKSILKDIEKALYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKY 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            E +K+++RNIRRD MD  KKS K+ + +ED +  LEN+IQK+TD  +K  D     K+K
Sbjct: 121 IESAKVAIRNIRRDAMDTAKKSEKAKEITEDDLKDLENNIQKVTDDAVKEADRLASIKEK 180

Query: 182 EIMHF 186
           E++  
Sbjct: 181 ELLDI 185


>gi|45644743|gb|AAS73131.1| predicted ribosome recycling factor [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 184

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+++ ++M  +++ LK     +RTGR +P++LD + V+ YG+  P+NQ +N++V E R L
Sbjct: 5   LKDLTEKMEKSVTALKNAFNKIRTGRANPAILDDINVDYYGNPTPINQTSNISVEEGRSL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S WDK ++  +E+ I  S+LGLNP   G ++R+ +P  TEE R   +K A A AE S+
Sbjct: 65  VISPWDKNLIPEIEKAILSSDLGLNPSTSGDLIRVTMPALTEETRQDYIKQARAEAENSR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RNIRRD  +  K  ++S + SED +  +E+ IQK TD  I  +DS  + K+ +++  
Sbjct: 125 ISIRNIRRDANNSAKDMQQSSEISEDDLRRIEDLIQKETDKFISIVDSDLKNKESDLLEI 184


>gi|320352945|ref|YP_004194284.1| ribosome recycling factor [Desulfobulbus propionicus DSM 2032]
 gi|320121447|gb|ADW16993.1| ribosome recycling factor [Desulfobulbus propionicus DSM 2032]
          Length = 185

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  ++++M  +   LK+D++ +RTGR S S+LD +KV AYGS + L+QV  +T+ E  M+
Sbjct: 6   IDQLREKMTASSEALKRDLVKIRTGRASLSLLDGIKVNAYGSQMSLDQVGTLTIPENNMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD +++ ++E+ I  S LGL P  +G V+R+ +P  T ERR  LVK      E+ K
Sbjct: 66  AIKPWDPQVLPAIEKAILASGLGLTPASDGNVVRLTIPPLTGERRKELVKQVKKIGEEYK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD ++ LKK +K  + SED +  L+ + QK+TD  I  ID     K+KE+M  
Sbjct: 126 VAIRNIRRDAIETLKKMKKDKELSEDELFRLQEEAQKVTDGYIGQIDEITGGKEKEVMAV 185


>gi|291523272|emb|CBK81565.1| ribosome recycling factor [Coprococcus catus GD/7]
          Length = 185

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  + +M  ++  L+++  T+R GR +P +LD +KV+ YG+  PL QV NVTV E R+L
Sbjct: 6   LQPYETKMQKSLDALEREYTTIRAGRANPHILDKLKVDYYGTPTPLQQVGNVTVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+ +++  +E+ I  S++G+ P  +G+ +R+  PE TEERR  L K      + +K
Sbjct: 66  MIQPWESKLIKDIEKAILASDIGITPTNDGKSIRLVFPELTEERRKELAKDVKKKGDAAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +VRNIRRDG D  KKS K+ + SED  A L+  +QKITD  +  +D   E K KEIM  
Sbjct: 126 TAVRNIRRDGNDAFKKSNKAKEISEDEYAELQEKLQKITDKYVAMVDKAVEAKTKEIMTV 185


>gi|329119073|ref|ZP_08247765.1| ribosome recycling factor [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464812|gb|EGF11105.1| ribosome recycling factor [Neisseria bacilliformis ATCC BAA-1200]
          Length = 185

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QV +VT+L+ R + 
Sbjct: 7   KTAESKMQRSLEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVGSVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A +E+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  VKPFESGMAAKIEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRAEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD      D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEVSEDEARRGEEAVQKLTDKYTAEADKILAAKEEDLMAV 185


>gi|256824967|ref|YP_003148927.1| ribosome recycling factor [Kytococcus sedentarius DSM 20547]
 gi|256688360|gb|ACV06162.1| ribosome recycling factor [Kytococcus sedentarius DSM 20547]
          Length = 186

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 58/180 (32%), Positives = 101/180 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + +M   I    +DM  +RTGR    M   + V+ YG+  PL Q+A+  V E R +
Sbjct: 7   LAEAQQKMDKAIEVAHEDMADIRTGRAHAGMFSKIMVDYYGAPTPLQQLASFQVPEARTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +DK  ++++E+ + ES+LG+NP  +G  +R  +P  TEERR   +K+A    E ++
Sbjct: 67  LVQPFDKSAMSAIEKALRESDLGVNPSNDGNQIRCVLPALTEERRKEYIKLAKGKGEDAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR   +H+ K  K G+  ED  A  E +++ +T      +++  + K+ E++  
Sbjct: 127 VSLRNIRRAAKEHIDKLVKDGEIGEDEGARGEKELEALTKKHTDQVETILKAKETELLEV 186


>gi|227890626|ref|ZP_04008431.1| ribosome recycling factor, RRF [Lactobacillus salivarius ATCC
           11741]
 gi|301300274|ref|ZP_07206483.1| ribosome recycling factor [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|227867564|gb|EEJ74985.1| ribosome recycling factor, RRF [Lactobacillus salivarius ATCC
           11741]
 gi|300852115|gb|EFK79790.1| ribosome recycling factor [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 187

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M      L++++  +R GR + S+L+ + VE YG+  PLNQ+A ++V E R+L
Sbjct: 8   IKEAQEKMTKAEDSLRRELGNIRAGRANASLLNRINVEYYGAPTPLNQMAQISVPEARVL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  + ++E  I  S+LG+ P+ +G  +R+ +P+ TEERR  L K   A +E  K
Sbjct: 68  LVTPYDKSSLKNIEHAIMASDLGIAPMNDGTAIRLVIPQLTEERRKELAKQVKAVSETGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD LKK++K+G  +ED +  LEN  QK+TD +IKNID   E+K+KE++ 
Sbjct: 128 VAVRNIRRDMMDALKKAQKNGDLTEDDLRDLENQAQKVTDESIKNIDKITEDKEKEVLE 186


>gi|29654680|ref|NP_820372.1| ribosome recycling factor [Coxiella burnetii RSA 493]
 gi|161830368|ref|YP_001597227.1| ribosome recycling factor [Coxiella burnetii RSA 331]
 gi|190569464|ref|ZP_03022332.1| ribosome recycling factor [Bacillus anthracis Tsiankovskii-I]
 gi|34924915|sp|Q83BV4|RRF_COXBU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044053|sp|A9N8Q7|RRF_COXBR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29541948|gb|AAO90886.1| ribosome recycling factor [Coxiella burnetii RSA 493]
 gi|161762235|gb|ABX77877.1| ribosome recycling factor [Coxiella burnetii RSA 331]
 gi|190559424|gb|EDV13441.1| ribosome recycling factor [Bacillus anthracis Tsiankovskii-I]
          Length = 185

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 70/186 (37%), Positives = 115/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N +I+  + K RM  ++  LK ++  LRT R  PS+L+ +KV+ Y    PL+QVA++ +
Sbjct: 2   INDIIN--DSKSRMEKSLGSLKTELAKLRTCRAHPSLLEHIKVDYYNVETPLSQVASIAI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
             PR L ++ W+K MV  +E+ I +++LGLNP   G V+R+P+P  TEERR  L +V   
Sbjct: 60  ENPRTLSITPWEKNMVGPIEKAIQKADLGLNPATVGMVIRVPLPPLTEERRKELARVVRE 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE +++++RNIRR+  + LK+  K  + SED     +  IQK+TD+ I  +D    +K+
Sbjct: 120 EAEHARVAIRNIRREANNDLKELMKEKEISEDEERRAQTAIQKLTDAQIAEVDKMASQKE 179

Query: 181 KEIMHF 186
            ++M  
Sbjct: 180 ADLMAV 185


>gi|116492646|ref|YP_804381.1| ribosome recycling factor [Pediococcus pentosaceus ATCC 25745]
 gi|122265890|sp|Q03FT3|RRF_PEDPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116102796|gb|ABJ67939.1| ribosome recycling factor [Pediococcus pentosaceus ATCC 25745]
          Length = 186

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 76/184 (41%), Positives = 120/184 (65%), Gaps = 2/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N++I  Q  +++M    + L++D+ ++R GR + S+LD V V+ YG+  PLNQ+A++T+ 
Sbjct: 4   NEII--QKAEEKMQKAQNVLERDLGSIRAGRANASLLDKVSVDYYGAPTPLNQMASITIP 61

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           EPR+L+V+ +DK ++  +E+ I  S+LG+NP  +G  +R+ VP+ TEE R  L K   A 
Sbjct: 62  EPRVLLVTPYDKSVLNDIEQAILMSDLGINPANDGSAIRLVVPQLTEETRKDLAKNVKAE 121

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            EK+K++VRNIRRD MD LKK+ K+G  ++D    LE   Q  TD  IK +D     K+K
Sbjct: 122 GEKAKVAVRNIRRDAMDTLKKANKNGDYNDDEFHDLEKQTQDSTDKAIKVVDEIVANKEK 181

Query: 182 EIMH 185
           E++ 
Sbjct: 182 EVLE 185


>gi|313901478|ref|ZP_07834931.1| ribosome recycling factor [Thermaerobacter subterraneus DSM 13965]
 gi|313468252|gb|EFR63713.1| ribosome recycling factor [Thermaerobacter subterraneus DSM 13965]
          Length = 184

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 112/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++RM   +   ++++  +R GR +P++L+ ++V+ YG+ +P++Q+A +T  EPRML
Sbjct: 6   LRETRERMEARVENFRRELAGVRAGRATPALLEKIRVDYYGTPMPIHQLATITAPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WDK ++  +ER I +S+LG+NP  +GQV+RI +P  TEE R  LVK     AE+ +
Sbjct: 66  VVQPWDKGVMGEIERAIAKSDLGVNPSSDGQVIRIVLPPLTEETRNELVKRVRKMAEEER 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RR   + LK     G  SED +   +  +Q++TD  I  ID     K+KEI   
Sbjct: 126 VAVRNLRRQANEDLKDLEDEG-FSEDEIRRAQEKVQELTDRIIARIDELLAAKEKEIREV 184


>gi|220931612|ref|YP_002508520.1| ribosome recycling factor [Halothermothrix orenii H 168]
 gi|254809515|sp|B8CW56|RRF_HALOH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219992922|gb|ACL69525.1| ribosome recycling factor [Halothermothrix orenii H 168]
          Length = 185

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N K +M   +   K D+ T+RTGR  PS+++ + V+ YG+  P+ Q+A V   E R LV
Sbjct: 7   KNAKQKMEKVLEATKHDLNTVRTGRARPSLVENIMVDYYGTQTPIQQMAKVVAPEARQLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK ++ S+E+ I +SNLGLNP  +G V+RI +P+ TEERR  LVKVAH  AEK +I
Sbjct: 67  IEPWDKSVIESIEKAILKSNLGLNPSNDGNVIRINIPQLTEERRKELVKVAHEKAEKGRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRR+  D LK+  K+ + SED      + IQ++TD+ I  ID   E+K+++IM  
Sbjct: 127 AIRNIRREANDELKEMEKNSEISEDNYHRGLDMIQELTDTYIDKIDKMLEDKEQDIMEV 185


>gi|145593876|ref|YP_001158173.1| ribosome recycling factor [Salinispora tropica CNB-440]
 gi|189044073|sp|A4X4J5|RRF_SALTO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145303213|gb|ABP53795.1| ribosome recycling factor [Salinispora tropica CNB-440]
          Length = 185

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K++   +RTGR + +M   + ++ YGS  PL Q+A++ V EPRM+
Sbjct: 6   LLEAEEKMERAIEHAKEEFGAIRTGRANAAMFSKIVIDYYGSPTPLPQMASIGVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D     ++E+ I +S+LG+NP  EG  LRI +P+ TEERR  ++KVA    E++K
Sbjct: 66  IIKPYDTSQTNAMEKAIRDSDLGVNPNNEGNQLRILLPQMTEERRREMIKVARHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RR   + L +  K+G+  ED     E ++  +T   +  +D   + K+ E++  
Sbjct: 126 VAVRNVRRKAKEELDRLVKAGEVGEDDGRRAEKELDDLTQRFVGTVDELIKHKEAELLEV 185


>gi|284928759|ref|YP_003421281.1| ribosome recycling factor [cyanobacterium UCYN-A]
 gi|284809218|gb|ADB94923.1| ribosome recycling factor [cyanobacterium UCYN-A]
          Length = 181

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++KD M  T+   +K   TLRTGR + ++LD V V+ YGS V L  +AN+   +   L
Sbjct: 2   LNDLKDSMKKTVESTQKSFNTLRTGRANSAILDRVTVDYYGSEVQLKSLANINTPDATTL 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  +  +E+ I+ S++GL P  +GQV+R+ +P  T+ERR  LVK+A+  AE+ K
Sbjct: 62  LIQPFDRGSIGQIEKAINMSDVGLTPNNDGQVIRLNIPPLTKERRKELVKIANKMAEEGK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD ++ ++K  K G ASED   +L+++IQK+TD   K ID     K K+IM  
Sbjct: 122 VAIRNIRRDAIETVRKQEKDGDASEDESRNLQDNIQKVTDEFTKKIDELLTIKNKDIMTV 181


>gi|256823124|ref|YP_003147087.1| ribosome recycling factor [Kangiella koreensis DSM 16069]
 gi|256796663|gb|ACV27319.1| ribosome recycling factor [Kangiella koreensis DSM 16069]
          Length = 185

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM  +I   K D+  +RTGR  PS+L+ + V  YG   P++QVA++ V E R LV
Sbjct: 7   KDADQRMDKSIESYKGDLAKVRTGRAHPSLLEHIMVPYYGVDTPISQVASIGVQEGRTLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           + ++DK  + + E+ I +S+LGL P V GQV+RI +P  +EERR   +KV    AE +K+
Sbjct: 67  LQIFDKGAIEATEKAILKSDLGLTPNVAGQVIRIALPPLSEERRKEFIKVVKMEAENAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD  + LK+  K  + SED +   E+ IQK+TD+ I  ID    EK+ E+M  
Sbjct: 127 AVRNIRRDANNSLKELEKEKEISEDDLRRAEDLIQKLTDTKIARIDEILAEKETELMEI 185


>gi|297559222|ref|YP_003678196.1| ribosome recycling factor [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843670|gb|ADH65690.1| ribosome recycling factor [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 185

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K+D  T+RTGR +P+  + + V+ YG+  P+NQ+A+ +V EPRM+
Sbjct: 6   LLEAEEKMEKAVTVAKEDFATIRTGRPTPATFNKITVDYYGARTPINQLASFSVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +D      +   I  S+LG+NP  +GQV+R+  PE +EERR   VKVA   AE SK
Sbjct: 66  VISPFDVNSRTDIINAIRNSDLGVNPSDDGQVIRVVFPELSEERRKEYVKVARTKAEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN+RR   D  +K+ KSG   ED     + ++ +++   + ++D   + K+ E++  
Sbjct: 126 VSIRNVRRRAKDTFEKAVKSGDIGEDEAHRAQAELDELSSKYVASVDELLKHKESELLEV 185


>gi|238784883|ref|ZP_04628883.1| Ribosome-recycling factor [Yersinia bercovieri ATCC 43970]
 gi|238796611|ref|ZP_04640118.1| Ribosome-recycling factor [Yersinia mollaretii ATCC 43969]
 gi|238714200|gb|EEQ06212.1| Ribosome-recycling factor [Yersinia bercovieri ATCC 43970]
 gi|238719589|gb|EEQ11398.1| Ribosome-recycling factor [Yersinia mollaretii ATCC 43969]
          Length = 185

 Score =  228 bits (583), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/166 (41%), Positives = 110/166 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +   +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L 
Sbjct: 7   KDTEVRMEKCLEAFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  LTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           S+RN+RRD  + +K   K  + SED     ++++QK+TD+ IK +D
Sbjct: 127 SIRNVRRDANEKVKALLKDKEISEDEDRRSQDEVQKLTDAFIKKVD 172


>gi|160940991|ref|ZP_02088330.1| hypothetical protein CLOBOL_05885 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436081|gb|EDP13848.1| hypothetical protein CLOBOL_05885 [Clostridium bolteae ATCC
           BAA-613]
          Length = 183

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 73/181 (40%), Positives = 112/181 (61%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+  +D+M  T+  L  D  T+R GR +P +LD +KV+ YG+  PL QV NV+V E RM
Sbjct: 3   ELKVYEDKMNKTLDVLLSDYGTIRAGRANPHVLDKIKVDYYGTPTPLQQVGNVSVPEARM 62

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+  W+K ++  +E+ I  S LG+NP  +G  +R+  PE TEERR  + K      + +
Sbjct: 63  IVIQPWEKSLLKPIEKAILTSELGINPTNDGNCIRLVFPEMTEERRKEVSKDVKKKGDNA 122

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++RNIRRD  +  KK+ K+G  SED +  +   +QK+TD  ++ +D   EEK KEIM 
Sbjct: 123 KVALRNIRRDANEAFKKAEKAGDISEDDLTEMTEKMQKLTDKMVEKVDKAVEEKTKEIMT 182

Query: 186 F 186
            
Sbjct: 183 V 183


>gi|73748219|ref|YP_307458.1| ribosome recycling factor [Dehalococcoides sp. CBDB1]
 gi|289432268|ref|YP_003462141.1| ribosome recycling factor [Dehalococcoides sp. GT]
 gi|123620145|sp|Q3ZZC4|RRF_DEHSC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|73659935|emb|CAI82542.1| ribosome recycling factor [Dehalococcoides sp. CBDB1]
 gi|288945988|gb|ADC73685.1| ribosome recycling factor [Dehalococcoides sp. GT]
          Length = 185

 Score =  228 bits (583), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 61/186 (32%), Positives = 118/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++  LQ  + +M  ++  L +++  +RTGR SP++++ ++VE  G   P+N +AN++ 
Sbjct: 2   INEI--LQKSEKKMSASLDVLLQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLANISA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +PR + +  WD+  ++++E+ I +S+LGL P  +G ++R+ +P  +EERR  ++K+ + 
Sbjct: 60  PDPRYITIQPWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKIVNK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ KI++RN+RRD MD +KK  K+ + S+D +    + +QKITD+ I   D    +K+
Sbjct: 120 RLEEDKIAMRNVRRDAMDEMKKLEKAKEISQDDLKRGSDQLQKITDNFIAKADKLGADKE 179

Query: 181 KEIMHF 186
            E+   
Sbjct: 180 AELRQV 185


>gi|332970849|gb|EGK09828.1| ribosome recycling factor [Psychrobacter sp. 1501(2011)]
          Length = 184

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L+     +RTGR  P ML  V V  YG+  PLNQVA+V V + R L+
Sbjct: 7   KDGEARMKKSLEALENAFSKVRTGRAHPGMLSGVMVNYYGADTPLNQVASVNVEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV +V++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE S++
Sbjct: 67  VQPFERSMVQAVDKAIREADLGLNPMTA-DVIRVPMPALTEETRRDMQKLARGEAENSRV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD ++ +K+  K  + SED      +DIQK+TD  I +IDS  E K+KE+M  
Sbjct: 126 SVRNVRRDMLNDVKELAKEKEISEDEERRASDDIQKLTDKYIASIDSKLEAKEKELMEV 184


>gi|318041138|ref|ZP_07973094.1| ribosome recycling factor [Synechococcus sp. CB0101]
          Length = 179

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 62/178 (34%), Positives = 107/178 (60%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
            ++  M  ++   ++   T+RTGR + S+LD ++VE YG+  PL  +A ++  +   + +
Sbjct: 2   ELEASMRKSVDSTQRTFNTIRTGRANASLLDKIQVEYYGADTPLKSLATISTPDSSTIQL 61

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   ++ +E+ I  S+LGL    +G+V+RI +P  TE+RR  L K+A  YAE+ K++
Sbjct: 62  QPFDASSLSLIEKAISMSDLGLTCNNDGKVIRINIPPLTEDRRKDLCKLAAKYAEEGKVA 121

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRRD +D +KK  K G+ SED     ++ +QK+TD  I  I+    EK+ +I+  
Sbjct: 122 LRNIRRDAIDKVKKQEKEGEFSEDQSRDEQDKVQKLTDKFIAEIEKLLAEKEADILKV 179


>gi|28378683|ref|NP_785575.1| ribosome recycling factor [Lactobacillus plantarum WCFS1]
 gi|254556881|ref|YP_003063298.1| ribosome recycling factor [Lactobacillus plantarum JDM1]
 gi|300768196|ref|ZP_07078101.1| ribosome recycling factor [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308180824|ref|YP_003924952.1| ribosome recycling factor [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|34924944|sp|Q88VJ7|RRF_LACPL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|28271519|emb|CAD64424.1| ribosome recycling factor [Lactobacillus plantarum WCFS1]
 gi|254045808|gb|ACT62601.1| ribosome recycling factor [Lactobacillus plantarum JDM1]
 gi|300494260|gb|EFK29423.1| ribosome recycling factor [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|308046315|gb|ADN98858.1| ribosome recycling factor [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 187

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 119/179 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++RM    + L++++  +R GR + S+L+ +  + YG+  PLNQ+A +TV EPR+L
Sbjct: 8   LKEAQERMKKAEAALQRELGNIRAGRANASLLNRISADYYGAQTPLNQMAAITVPEPRVL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +E+ I  S+LG++P  +G  +R+ +P+ TEERR  L K   A  E++K
Sbjct: 68  MVTPFDKSALKEIEKAILASDLGISPANDGSAIRLVIPQLTEERRKELAKDVKAEGERAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RRD M+ LKK  K G+ ++D +  LE+  QK+TD   K++D+   +K+KEI+ 
Sbjct: 128 VAVRNVRRDAMEALKKGHKDGQFTDDQLHQLEDQAQKLTDQAGKDVDAIVADKEKEILE 186


>gi|257784511|ref|YP_003179728.1| ribosome recycling factor [Atopobium parvulum DSM 20469]
 gi|257473018|gb|ACV51137.1| ribosome recycling factor [Atopobium parvulum DSM 20469]
          Length = 181

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              K  M   I  LK +   +RTGR +P  LD +KV+ YG   P++Q+A + V E  ML+
Sbjct: 6   DKAKQSMEKCIEALKNNFGRVRTGRANPHALDHIKVDYYGQPTPISQLAAIKVPEASMLL 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WDK  + S+E+ I  S+LG+ P  +G  +R+P P  TEERR  L K     AE++++
Sbjct: 66  VEPWDKTALKSIEKAIESSDLGITPSNDGSAIRLPFPMPTEERRRELAKECSQIAEEARV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD    +    +  + SED     +N IQK+TD+ I  I+S  + K  EIM  
Sbjct: 126 AIRNVRRDINGKI---ERDEELSEDDQKREKNGIQKLTDTYIAQIESLLKTKTSEIMEI 181


>gi|111225137|ref|YP_715931.1| ribosome recycling factor [Frankia alni ACN14a]
 gi|123043981|sp|Q0RDQ6|RRF_FRAAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|111152669|emb|CAJ64410.1| ribosome releasing factor [Frankia alni ACN14a]
          Length = 185

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  K+D   +RTGR++P++   + V+ YG+  P+ Q+A+  + EPRM+
Sbjct: 6   LLDAEEKMEKAVSVAKEDFANIRTGRITPAVFSKIVVDYYGAPTPVQQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +AS+E+ + +S+LG+NP  +G ++RI  PE +E+RR  LVKVA + AE+++
Sbjct: 66  IITPYDKSSLASIEKAVRDSDLGVNPSNDGTIIRIVFPELSEQRRRDLVKVARSKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN+RR   D + +  + G A ED     E D+ + T   +  +D     K+ +++  
Sbjct: 126 VSIRNVRRHAKDGIDRIVRDGDAGEDEGRRAEKDLDEATHRYVGQVDELLRLKEADLLSV 185


>gi|292670556|ref|ZP_06603982.1| ribosome recycling factor [Selenomonas noxia ATCC 43541]
 gi|292647722|gb|EFF65694.1| ribosome recycling factor [Selenomonas noxia ATCC 43541]
          Length = 185

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++ M   I  L+++  +LR GR +P++LD V V  YG+   +NQ+A VTV EP M+
Sbjct: 6   LSKHEESMNKAIDVLRREFSSLRAGRATPNLLDKVMVPYYGTPTSVNQLAKVTVPEPHMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ W+KE++  +E  I +S+LGL+P  +G V+R+ VP+ T+ERR  L+K      E++K
Sbjct: 66  VITPWEKEILHDIEIAISKSDLGLSPNSDGTVIRLAVPQPTQERRKELIKTVGKKTEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  + +KK  K  + +ED     ++ +QK+ D  +K ++     K+KE+M  
Sbjct: 126 VALRNIRRDANEAIKKLEKDKEINEDESKRGQDSVQKLVDKFVKQMEEMRASKEKEVMEI 185


>gi|238792752|ref|ZP_04636383.1| Ribosome-recycling factor [Yersinia intermedia ATCC 29909]
 gi|238727860|gb|EEQ19383.1| Ribosome-recycling factor [Yersinia intermedia ATCC 29909]
          Length = 185

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 70/166 (42%), Positives = 109/166 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM       +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L 
Sbjct: 7   KDTEVRMEKCFEAFQNHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  LTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           S+RN+RRD  + +K   K  + SED     ++D+QK+TD+ IK +D
Sbjct: 127 SIRNVRRDANEKVKALLKDKEISEDEDRRSQDDVQKLTDAFIKKVD 172


>gi|116618296|ref|YP_818667.1| ribosome recycling factor [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227431621|ref|ZP_03913657.1| ribosome recycling factor [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|122271504|sp|Q03WX8|RRF_LEUMM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116097143|gb|ABJ62294.1| ribosome recycling factor [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227352613|gb|EEJ42803.1| ribosome recycling factor [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 181

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 78/182 (42%), Positives = 118/182 (64%), Gaps = 3/182 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            DL N K+RM      L++++  +RTGR +P++L+ V+VE YG+  PLNQVA+++V E R
Sbjct: 3   FDLTNAKERMKGAQEALQRELANIRTGRANPNILNRVEVEYYGAMTPLNQVASISVPEAR 62

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L+++ +DK  + ++   I+ S+LGLNP  +G ++R+ +P+ TEERR  L K   A AEK
Sbjct: 63  ILLITPFDKSALEAIVHAINVSDLGLNPASDGNIVRLAIPQMTEERRKELAKEVKAEAEK 122

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+SVRN+RRD MD +K   K     ED     E+  QK+TD  IK ID    EK+KE++
Sbjct: 123 AKVSVRNVRRDIMDDIK---KDKDMPEDDARKAEDQTQKLTDENIKAIDEIAAEKEKELL 179

Query: 185 HF 186
             
Sbjct: 180 TI 181


>gi|238650359|ref|YP_002916211.1| ribosome recycling factor [Rickettsia peacockii str. Rustic]
 gi|259494554|sp|C4K0R2|RRF_RICPU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238624457|gb|ACR47163.1| ribosome recycling factor [Rickettsia peacockii str. Rustic]
          Length = 186

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 85/179 (47%), Positives = 123/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRTELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM  
Sbjct: 128 SLRNIRRDGNEALKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIMTV 186


>gi|291544887|emb|CBL17996.1| ribosome recycling factor [Ruminococcus sp. 18P13]
          Length = 184

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 66/186 (35%), Positives = 113/186 (60%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+ I L   +++M   +  L  +  ++R GR +P +LD V V+ YG+  P+NQ+A VTV
Sbjct: 1   MNEHIKL--AEEKMDKALQHLAAEFASIRAGRANPGILDKVTVDYYGTPTPVNQMAAVTV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L++  WD  M+ ++ + +  S++G+ P  +G+V+R+  P+ TE+RR  + K    
Sbjct: 59  SEARILLIQPWDASMIKAINKALLASDIGITPTDDGKVIRLVFPQLTEDRRKEICKSIKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y +++K++VRN+RRD M+  K  +K+ + +ED +   E  IQ ITD      DS   +K+
Sbjct: 119 YGDETKVAVRNVRRDTMEKFKAMKKNSEITEDELKDAEKKIQNITDKFCTQTDSMVSDKE 178

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 179 KEVMSL 184


>gi|332362392|gb|EGJ40192.1| ribosome recycling factor [Streptococcus sanguinis SK1056]
          Length = 185

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTHSHQSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERALNASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 VAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEMTVNKEKELLEV 185


>gi|325282615|ref|YP_004255156.1| Ribosome-recycling factor [Deinococcus proteolyticus MRP]
 gi|324314424|gb|ADY25539.1| Ribosome-recycling factor [Deinococcus proteolyticus MRP]
          Length = 183

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 71/177 (40%), Positives = 116/177 (65%), Gaps = 3/177 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG +I  L+ ++  LRTGR +P +L  V VE +GS +P++QVA++   + R L 
Sbjct: 9   KDARERMGKSIEALESNLGVLRTGRANPGILKKVMVEYFGSTMPIDQVASINAPDARTLT 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ WD+  +  +E+ I +S+LGLNP  +G ++ I +P  TEERR  +VK A +YAE+++I
Sbjct: 69  VTPWDRGALNPIEKAIRDSDLGLNPNNKGDMIFISIPALTEERRKEMVKNAKSYAEEARI 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RN+R+  +D +KK        ED V   E ++QKITD  +K +D  F+ K+ EI+
Sbjct: 129 SIRNVRKSALDEVKKL---DDLGEDEVKRAEAEVQKITDEYVKKVDEVFDRKEAEIL 182


>gi|255067012|ref|ZP_05318867.1| ribosome recycling factor [Neisseria sicca ATCC 29256]
 gi|255048837|gb|EET44301.1| ribosome recycling factor [Neisseria sicca ATCC 29256]
          Length = 185

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAESKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV  + AE+ ++
Sbjct: 67  VKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRSEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYIAEADKTLAAKEEDLMAI 185


>gi|163791595|ref|ZP_02185996.1| ribosome recycling factor [Carnobacterium sp. AT7]
 gi|159873144|gb|EDP67247.1| ribosome recycling factor [Carnobacterium sp. AT7]
          Length = 185

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 124/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ   ++M  T S L++++ T+R GR +  +LD + V  YG+  PL Q+A ++V EPR+L
Sbjct: 6   LQTTNEKMVKTESALQRELGTIRAGRANAGLLDRINVVYYGAPTPLKQLAQISVPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  ++ +E+ I +S+LG++P  +G V+R+ +P+ TEERR  L K     AE +K
Sbjct: 66  MITPFDKTSISDIEKSIMQSDLGISPANDGNVIRLVIPQLTEERRKELAKKVGKEAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR+ MD LKK+ K+ + ++D + + E DIQKIT+ ++KNID+   EK+KE++  
Sbjct: 126 VSVRNIRREAMDELKKAEKNNEITQDDLRTFEEDIQKITNESVKNIDAIAAEKEKELLDV 185


>gi|223994729|ref|XP_002287048.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220978363|gb|EED96689.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 179

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 70/175 (40%), Positives = 116/175 (66%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + ++RM  T++ L +++ T+RTGR +P+MLD V+ + YG+  PL+Q+A ++V   + L V
Sbjct: 2   DCEERMDKTMASLAENLATIRTGRANPNMLDRVECDYYGATTPLSQMATISVPSSQQLQV 61

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S +DK ++  +E+ I  S LG  P  +G V+RI +P+ TEERR  L+K   +  E++K++
Sbjct: 62  SPFDKSVLNDIEKAIIYSGLGFTPNNDGSVIRINIPQLTEERRKELLKQCKSIGEEAKVA 121

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +RNIRRDG+D++KK  K+G   +D     ++ IQK TD  +K ID    +K+KE+
Sbjct: 122 IRNIRRDGVDNIKKMEKNGDLGKDQALDGQDAIQKSTDEHVKMIDETVAKKEKEV 176


>gi|15892120|ref|NP_359834.1| ribosome recycling factor [Rickettsia conorii str. Malish 7]
 gi|20139894|sp|Q92J72|RRF_RICCN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|15619247|gb|AAL02735.1| ribosome recycling factor [Rickettsia conorii str. Malish 7]
          Length = 186

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 86/179 (48%), Positives = 124/179 (69%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR ALVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRTALVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM  
Sbjct: 128 SLRNIRRDGNEALKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIMTV 186


>gi|304312451|ref|YP_003812049.1| Ribosome recycling factor [gamma proteobacterium HdN1]
 gi|301798184|emb|CBL46406.1| Ribosome recycling factor [gamma proteobacterium HdN1]
          Length = 185

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM   +  L++ +  +RTGR +P++LD VKV+ YG+  PL QVA++ V + R L 
Sbjct: 7   KDTEARMKKCLEALEQALRKVRTGRANPAILDGVKVKYYGTDTPLKQVASINVEDSRTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S +D+  +  +E+ I +++LGLNP   G V+R+P+P  T+E R  + K+A   AE +++
Sbjct: 67  ISAFDRGAIPDIEKAIMKADLGLNPSTSGVVIRVPMPALTQETRKEMTKIARNEAEHARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD    +K+  K  +  ED     E+++QK+TD  I  +D     K+ ++M  
Sbjct: 127 SVRNVRRDANADIKELLKEKQIGEDEARKGEDEVQKLTDRYIVEVDKILTAKEADLMQI 185


>gi|168045141|ref|XP_001775037.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673624|gb|EDQ60144.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 264

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 68/181 (37%), Positives = 119/181 (65%), Gaps = 1/181 (0%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           ++I++ +  +RM  ++   K    T+RTGR +PS+LD V+VE YG++V L  +A +T  +
Sbjct: 82  ELIEM-DAMERMEKSLEATKASFNTVRTGRATPSLLDRVQVEYYGTNVILKSIAQITTPD 140

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
              ++++ +DK  + S+E+ + +S++G+ P  +G V+R+ VP+ T +RR  L+K+    +
Sbjct: 141 GSTILITPFDKSSLTSIEKSLVKSDIGITPNNDGNVIRLNVPQLTADRRKELLKLVSKLS 200

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E+ K+++RN+RRD +   +K  K  K SED V  L  DIQK+TD  IK ID+ F++K+KE
Sbjct: 201 EEGKVAIRNVRRDAIKSYEKLEKEKKLSEDNVKDLSGDIQKMTDDYIKKIDALFKQKEKE 260

Query: 183 I 183
           +
Sbjct: 261 L 261


>gi|289643662|ref|ZP_06475775.1| ribosome recycling factor [Frankia symbiont of Datisca glomerata]
 gi|289506553|gb|EFD27539.1| ribosome recycling factor [Frankia symbiont of Datisca glomerata]
          Length = 185

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K+D   +RTGR++PS+   V V+ YG+  P+NQ+A+  + EPRM+
Sbjct: 6   LLEAEEKMDKAVAVAKEDFANIRTGRITPSVFSKVLVDYYGAPTPVNQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +A++E+ + +S+LG+NP  +G ++R   PE +E+RR  L KVA   AE+++
Sbjct: 66  IITPYDKGSLAAIEKAVRDSDLGVNPSNDGTIIRCLFPELSEQRRRDLAKVARTKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RN+RR   D + +  + G+A ED     E D+ + T   +  +D     K+ E++  
Sbjct: 126 ISIRNVRRHSKDAIDRIVRDGEAGEDEGRRGEKDLDEATHRYVSQVDELLRHKESELLAV 185


>gi|26988326|ref|NP_743751.1| ribosome recycling factor [Pseudomonas putida KT2440]
 gi|148549389|ref|YP_001269491.1| ribosome recycling factor [Pseudomonas putida F1]
 gi|34924941|sp|Q88MH7|RRF_PSEPK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231212|sp|A5W847|RRF_PSEP1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|24983074|gb|AAN67215.1|AE016348_7 ribosome recycling factor [Pseudomonas putida KT2440]
 gi|148513447|gb|ABQ80307.1| ribosome recycling factor [Pseudomonas putida F1]
 gi|313500238|gb|ADR61604.1| Frr [Pseudomonas putida BIRD-1]
          Length = 185

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG +I  L +++  +RTGR  PS+LD VKV A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMGKSIEALSRNLAAIRTGRAHPSILDSVKVTAWGSEMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A   AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQASGVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD +  LKK  K  + SED      ++IQK+TD  +  +D+ F+ K+K++M  
Sbjct: 127 AVRNVRRDALADLKKLTKDKEISEDEERRAADEIQKLTDKFVAEVDAAFKAKEKDLMAV 185


>gi|237736212|ref|ZP_04566693.1| ribosome recycling factor [Fusobacterium mortiferum ATCC 9817]
 gi|229421765|gb|EEO36812.1| ribosome recycling factor [Fusobacterium mortiferum ATCC 9817]
          Length = 188

 Score =  227 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 82/176 (46%), Positives = 118/176 (67%), Gaps = 2/176 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            K++MG  +   K    ++R GR + SMLD +KVE YGS +PLNQV +V+  E R+LV+ 
Sbjct: 10  CKEKMGKAVEATKHKFTSIRAGRANVSMLDGIKVEQYGSEMPLNQVGSVSAPEARLLVID 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  +NLGL P  +G+V+R+ +PE T +RR   VK+A + AE  K++V
Sbjct: 70  PWDKSLIGKIEKAIIAANLGLTPNNDGKVIRLIMPELTADRRKEYVKMAKSEAENGKVAV 129

Query: 130 RNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RNIR+DG + LKK  K  +   SED V +LE +IQK+TD+ IK ID  F +K+KEI
Sbjct: 130 RNIRKDGNNDLKKLLKDKENPVSEDEVKNLEAEIQKLTDAHIKEIDELFAKKEKEI 185


>gi|163849097|ref|YP_001637141.1| ribosome recycling factor [Chloroflexus aurantiacus J-10-fl]
 gi|222527070|ref|YP_002571541.1| ribosome recycling factor [Chloroflexus sp. Y-400-fl]
 gi|189044049|sp|A9WAG2|RRF_CHLAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809502|sp|B9LEM3|RRF_CHLSY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|163670386|gb|ABY36752.1| ribosome recycling factor [Chloroflexus aurantiacus J-10-fl]
 gi|222450949|gb|ACM55215.1| ribosome recycling factor [Chloroflexus sp. Y-400-fl]
          Length = 185

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N VI     +  +      L+  + ++RTGR S ++++ + VEAYG  +PLNQ+AN++V
Sbjct: 2   LNDVI--SEYEAHLKKATEALRHHLASIRTGRASSALVEHLHVEAYGMTMPLNQLANISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR++V+  +D  M+ ++E+ I +S+LGLNP  +G+V+R+PVP  TEERR  LVK+   
Sbjct: 60  PEPRLIVIQPYDANMIKAIEKAIQQSDLGLNPSNDGRVIRLPVPPLTEERRRELVKMVRH 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ KISVRN RRD +D LKK       SED +   +  IQ++TD   + +D    EK+
Sbjct: 120 RVEEVKISVRNQRRDAIDDLKKLEAEKLISEDELHRGQERIQQLTDRCTRELDQIGAEKE 179

Query: 181 KEIMHF 186
            E+M  
Sbjct: 180 AEVMAV 185


>gi|222152659|ref|YP_002561834.1| ribosome recycling factor [Streptococcus uberis 0140J]
 gi|254809534|sp|B9DRF1|RRF_STRU0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|222113470|emb|CAR41195.1| ribosome recycling factor [Streptococcus uberis 0140J]
          Length = 185

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++    R   +   L ++  ++R GR + S+LD ++VE YG   PLNQ+A++TV E R+L
Sbjct: 6   IEKANQRFEQSFQSLSREYASIRAGRANASLLDRIQVEYYGVPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER I+ S+LG+ P  +G V+R+ +P  TEE R  L K      E  K
Sbjct: 66  LISPFDKSSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGENQK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK TD  IK+ID    EK+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKNKEITEDELKALEKDIQKATDQAIKHIDGMTSEKEKELLTV 185


>gi|116669931|ref|YP_830864.1| ribosome recycling factor [Arthrobacter sp. FB24]
 gi|172044060|sp|A0JUP4|RRF_ARTS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116610040|gb|ABK02764.1| ribosome recycling factor [Arthrobacter sp. FB24]
          Length = 185

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    D+M   +   K+D  ++RTGR +P + + V V+ YGS  PL Q+A+  V + R +
Sbjct: 6   LLEAGDKMDKAVEVAKEDFASIRTGRATPGLYNRVLVDYYGSPTPLQQLASFAVPDARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +ER + +S +G NP  +G V+RI +PE T+ERR   VK+  A  E +K
Sbjct: 66  LITPFDKTALRDIERALSDSEVGANPSNDGNVIRITIPELTKERRKEYVKIVKAKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR   + L K  K G+A ED  A  E ++  +T + +  ID   + K+ E++  
Sbjct: 126 VSIRNIRRKAKETLDKLVKDGEAGEDEGARGEKELDALTKAHVDGIDDLLKRKEAELLEV 185


>gi|75700577|gb|ABA20253.1| ribosome recycling factor [Anabaena variabilis ATCC 29413]
          Length = 173

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 61/170 (35%), Positives = 103/170 (60%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+   ++   T+RTGR + S+LD V V+ YGS  PL  +AN++  +   + +  +DK
Sbjct: 1   MQHTVEATQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDATTIQIQPYDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E+ I  S++GL P  +G  +R+ +P  T +RR  LVK+A  YAE+ ++++RNIR
Sbjct: 61  TSLNIIEKAISLSDVGLTPSNDGSAIRLNIPPLTSDRRKELVKLAAKYAEEGRVAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RD +D ++K  K+ + SED     ++ +QK+T+     ID    EK+K+I
Sbjct: 121 RDAIDSIRKQEKNAEVSEDEAKDQQDKLQKLTNKYTARIDELLAEKEKDI 170


>gi|302670318|ref|YP_003830278.1| ribosome recycling factor Frr [Butyrivibrio proteoclasticus B316]
 gi|302394791|gb|ADL33696.1| ribosome recycling factor Frr [Butyrivibrio proteoclasticus B316]
          Length = 183

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 118/186 (63%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+   L+   D+M  +  +L++D+ ++R GR +P +LD +KV+ YG+  PL QV NV+V
Sbjct: 1   MNE--KLKAYNDKMQKSFDYLREDLASIRAGRANPHVLDKIKVDYYGTPTPLQQVGNVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R++ ++ WDK ++  +E+ I  S+LG+ P  +G V+R+  PE TEERR  L K    
Sbjct: 59  PEARIIQIAPWDKTLIKDIEKAIMMSDLGITPSNDGTVIRLVFPELTEERRKQLTKDIRK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRN+RRDG D  KK  K  + SED +  L  ++QKITD  IK+ID   EEK 
Sbjct: 119 KGEDAKVAVRNVRRDGNDAFKKL-KGTEVSEDEINDLNEELQKITDKFIKDIDVAVEEKN 177

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 178 KEVMTV 183


>gi|15827834|ref|NP_302097.1| ribosome recycling factor [Mycobacterium leprae TN]
 gi|221230311|ref|YP_002503727.1| ribosome recycling factor [Mycobacterium leprae Br4923]
 gi|3122778|sp|O33046|RRF_MYCLE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809523|sp|B8ZRV0|RRF_MYCLB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|2251188|emb|CAB10670.1| ribosome recycling factor [Mycobacterium leprae]
 gi|13093386|emb|CAC30541.1| ribosome recycling factor [Mycobacterium leprae]
 gi|219933418|emb|CAR71685.1| ribosome recycling factor [Mycobacterium leprae Br4923]
          Length = 185

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   +S  ++D+  +RTGR +P M   + ++ YGS  P+ Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVSVAREDLSMIRTGRANPGMFSRLVIDYYGSATPITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A    E +K
Sbjct: 66  VIKPYDAIQLHAIETAIRNSDLGVNPSNDGTLIRVAVPQLTEERRRELVKQAKCKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + RK G+A ED V+  E D+ K T   +  ID   + K+ E++  
Sbjct: 126 VSVRNIRRKVMEELHRIRKDGEAGEDEVSRAEKDLDKTTHQYVIQIDELVKHKEGELLEV 185


>gi|313904228|ref|ZP_07837607.1| ribosome recycling factor [Eubacterium cellulosolvens 6]
 gi|313471030|gb|EFR66353.1| ribosome recycling factor [Eubacterium cellulosolvens 6]
          Length = 184

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 77/175 (44%), Positives = 111/175 (63%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  TI+ L  ++ T+R GR +P +LD + VE YG+  PL QVAN+TV E R++ +  W
Sbjct: 10  EKMTKTIANLDSELATIRAGRANPHVLDRITVEYYGAPTPLQQVANITVPEARIIQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +  MV  + + I  S LG+NP  +G+V+R+  PE TE+RR  L K      E +K+++RN
Sbjct: 70  EASMVKEIVKAIQMSELGINPSTDGKVVRLIFPELTEDRRKELTKDVKKKGEAAKVAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IRRD  D  KK  K+   SED++A LE D+QK+TD  IK+ID   E K KE+M  
Sbjct: 130 IRRDANDSFKKLEKAEDLSEDIIAGLEEDVQKLTDKYIKDIDKAVEVKSKELMTV 184


>gi|148653598|ref|YP_001280691.1| ribosome recycling factor [Psychrobacter sp. PRwf-1]
 gi|172048549|sp|A5WGF0|RRF_PSYWF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|148572682|gb|ABQ94741.1| ribosome recycling factor [Psychrobacter sp. PRwf-1]
          Length = 184

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  T+  L+     +RTGR  P ML  V V  YG+  PLNQVA+V V + R L+
Sbjct: 7   KDGEDRMKKTLEVLENAFSKVRTGRAHPGMLSGVMVSYYGADTPLNQVASVNVEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV +V++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE S++
Sbjct: 67  VQPFERSMVQAVDKAIREADLGLNPMTA-DVIRVPMPALTEETRRDMQKLARGEAENSRV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD ++ +K+  K  + SED      +DIQKITD  I +IDS  E K+KE+M  
Sbjct: 126 SIRNVRRDMLNDIKELAKEKEISEDDERRASDDIQKITDKYIASIDSKLEAKEKELMEV 184


>gi|288922418|ref|ZP_06416606.1| ribosome recycling factor [Frankia sp. EUN1f]
 gi|288346221|gb|EFC80562.1| ribosome recycling factor [Frankia sp. EUN1f]
          Length = 185

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +S  K+D   +RTGR++P++   V V+ YG+  P+ Q+A+  + EPRM+
Sbjct: 6   LLEAEEKMDKAVSVAKEDFGNIRTGRITPAVFGKVLVDYYGAPTPVQQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + +VE+ + +S+LG+NP  +G ++R   PE +E+RR  LVKVA   AE+++
Sbjct: 66  IITPYDKSSLGAVEKAVRDSDLGVNPSNDGAIIRCVFPELSEQRRRELVKVARTKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR   D + +  + G A ED     E D+ + T   +  +D     K+ +++  
Sbjct: 126 VSIRNIRRHAKDAIDRIVRDGDAGEDEGRRGEKDLDEATHRYVAQVDELLRIKESDLLSV 185


>gi|298245133|ref|ZP_06968939.1| ribosome recycling factor [Ktedonobacter racemifer DSM 44963]
 gi|297552614|gb|EFH86479.1| ribosome recycling factor [Ktedonobacter racemifer DSM 44963]
          Length = 185

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
             + + RM   I  LK+D+ ++RTGR S S+LD + V+ YG+  P+NQVA +++ E R++
Sbjct: 6   FDDAERRMKRAIDALKQDLGSIRTGRASASLLDRITVDYYGAPTPVNQVATISIPEARLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK++ A +E+ I +S+LG+NP  +GQV+R+ +P   EERR  LVK  H   ++ K
Sbjct: 66  VIQPWDKKISADIEKAIQKSDLGINPNNDGQVIRLNIPPMNEERRKDLVKSLHKKLDEHK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D L++  K  + SED +      +QK+TD  I+ +D   + K+ EI+  
Sbjct: 126 VAVRNVRRDVQDKLREREKKKEVSEDELKRSTEKLQKLTDRFIEEMDKVGKTKELEILEV 185


>gi|188586056|ref|YP_001917601.1| ribosome recycling factor [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229564261|sp|B2A383|RRF_NATTJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|179350743|gb|ACB85013.1| ribosome recycling factor [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 184

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            ++ + +M   +S LK ++ +LR GR +PS+L+ + V+ YG   PLNQ+AN++  EPR+L
Sbjct: 5   FKDAEQKMKKALSSLKSELASLRAGRANPSILEGINVDYYGMATPLNQLANISAPEPRLL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +DK  +  +E+ I +S++GL P  +GQV+R+ VP+ TEERR  LVK+     E +K
Sbjct: 65  VVQPYDKSAIEDIEKAILKSDVGLTPNNDGQVIRLAVPQLTEERRNELVKIVRQKGEDTK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+RRD  D LKK  K  + SED     +++IQKITD  IK ID     K++EI  F
Sbjct: 125 VVVRNVRRDANDELKKLEKEKEISEDESIRGQDEIQKITDKYIKKIDEVMNAKEEEITSF 184


>gi|294102175|ref|YP_003554033.1| ribosome recycling factor [Aminobacterium colombiense DSM 12261]
 gi|293617155|gb|ADE57309.1| ribosome recycling factor [Aminobacterium colombiense DSM 12261]
          Length = 186

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ + ++M   I  LK++ +++RTGR  P +++ ++V+ YGS  P+ Q+A V+V E R +
Sbjct: 6   IKTMSEKMEKVIEHLKEEFISIRTGRAHPGLVNDIRVDYYGSQTPIKQLATVSVPEARQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+ ++  +E+ I  S+LG+NP  +G+ +R+ +PE T+ERR+ L KV   YAE+++
Sbjct: 66  LIAPFDRSILKGIEKAIQASSLGINPQNDGENIRLTLPELTKERRIELSKVVSKYAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRNIRR+  D LKK  K    SED       D+Q ITD  IK ID   + K+KEI+ 
Sbjct: 126 IAVRNIRREVNDTLKKMEKDSVISEDEQRKYTKDVQDITDDFIKKIDEVLKVKEKEIIE 184


>gi|149010411|ref|ZP_01831782.1| ribosome recycling factor [Streptococcus pneumoniae SP19-BS75]
 gi|147764892|gb|EDK71821.1| ribosome recycling factor [Streptococcus pneumoniae SP19-BS75]
          Length = 185

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S++G+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSLKDIERALNASDIGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+I+     K+KE++  
Sbjct: 126 VAVRNIRRDAMDEAKKREKAKEITEDELKTLEKDIQKVTDDAVKHINDMTANKEKELLEV 185


>gi|241896312|ref|ZP_04783608.1| ribosome recycling factor [Weissella paramesenteroides ATCC 33313]
 gi|241870473|gb|EER74224.1| ribosome recycling factor [Weissella paramesenteroides ATCC 33313]
          Length = 185

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ K+RM      L++++  +R G  +PS+L  + VE YG+  PLNQ+A+VTV E R+L
Sbjct: 6   IESAKERMSKAGDALRRELGNIRAGVANPSILRNITVEYYGAETPLNQLASVTVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I  S+LGL P  +G V+R+ +P  TEE R  L K   A +EK+K
Sbjct: 66  LITPFDKSVLKGIEQSIFASDLGLTPANDGSVIRLVIPALTEETRKDLAKEVKAESEKAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD MD  KK+ K+   SED   ++E+DIQK TD+ IKN+D    EK+KE++  
Sbjct: 126 VAVRNVRRDAMDDAKKALKNNDLSEDEAHNIEDDIQKATDAAIKNVDEIAAEKEKELLTI 185


>gi|90961538|ref|YP_535454.1| ribosome recycling factor [Lactobacillus salivarius UCC118]
 gi|122449175|sp|Q1WUG4|RRF_LACS1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|90820732|gb|ABD99371.1| Ribosome Recycling Factor, RRF [Lactobacillus salivarius UCC118]
          Length = 187

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M      L++++  +R GR + S+L+ + VE YG+  PLNQ+A ++V E R+L
Sbjct: 8   IKEAQEKMTKAEDSLRRELGNIRAGRANASLLNRINVEYYGAPTPLNQMAQISVPEARVL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  + ++E  I  S+LG+ P+ +G  +R+ +P+ TEERR  L K   A +E  K
Sbjct: 68  LVTPYDKTSLKNIEHAIMASDLGIAPMNDGTAIRLVIPQLTEERRKELAKQVKAVSETGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRNIRRD MD LKK++K+G  +ED +  LEN  QK+TD +IKNID   E+K+KE++ 
Sbjct: 128 VAVRNIRRDMMDALKKAQKNGDLTEDDLRDLENQAQKVTDESIKNIDKITEDKEKEVLE 186


>gi|310828069|ref|YP_003960426.1| ribosome recycling factor [Eubacterium limosum KIST612]
 gi|308739803|gb|ADO37463.1| ribosome recycling factor [Eubacterium limosum KIST612]
          Length = 185

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 73/186 (39%), Positives = 117/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ D     D+M   ++ L + +  LR GR +P +LD V V+ YG+   +NQ+A+V V
Sbjct: 2   LNEIKD--RANDKMQKALNNLNESLGGLRAGRANPHILDKVTVDYYGAATAINQLASVAV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+ +  +D   ++++E+ I  ++LG NP  +G+++R+ VPE TEERR  LVK+   
Sbjct: 60  PEARMITIQPYDSTSISAIEKAILTADLGFNPSNDGKIIRLIVPELTEERRKELVKLTKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E+ K+++RNIRR  +  LK + K G  SED +   E +IQK+TD  +KNI+   +EK+
Sbjct: 120 YGEECKVAMRNIRRKAVQDLKDAEKEGLISEDELHQGEKEIQKLTDDEVKNIEGVLKEKE 179

Query: 181 KEIMHF 186
            EIM  
Sbjct: 180 AEIMAV 185


>gi|91205947|ref|YP_538302.1| ribosome recycling factor [Rickettsia bellii RML369-C]
 gi|157826692|ref|YP_001495756.1| ribosome recycling factor [Rickettsia bellii OSU 85-389]
 gi|122425318|sp|Q1RHF1|RRF_RICBR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231217|sp|A8GV48|RRF_RICB8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|91069491|gb|ABE05213.1| Ribosome recycling factor [Rickettsia bellii RML369-C]
 gi|157801996|gb|ABV78719.1| ribosome recycling factor [Rickettsia bellii OSU 85-389]
          Length = 186

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 85/186 (45%), Positives = 124/186 (66%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++V   +N++++M   +  L  ++  LRTGR S ++LD V VEAYG  +PL+QVA++T 
Sbjct: 1   MDKVTLKKNLQEKMDKALKVLDHELKGLRTGRASVNLLDSVTVEAYGDRMPLSQVASLTT 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + V VWDK MV+SVE+ I  +NLGL P  +GQ++R+P+P  TEERR  L K+AH 
Sbjct: 61  PDARTINVQVWDKSMVSSVEKAITVANLGLTPSSDGQLIRLPIPALTEERRKELAKLAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E +KIS+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K+
Sbjct: 121 YGEDTKISLRNIRRDGNEELKKMEKDNIIAKDEHHSLAEQVQKLTDEYSSKVDSAIKQKE 180

Query: 181 KEIMHF 186
           +EIM  
Sbjct: 181 QEIMTV 186


>gi|158313016|ref|YP_001505524.1| ribosome recycling factor [Frankia sp. EAN1pec]
 gi|238686845|sp|A8L6D6|RRF_FRASN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|158108421|gb|ABW10618.1| ribosome recycling factor [Frankia sp. EAN1pec]
          Length = 185

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +S  K D   +RTGR++P++   V V+ YG+  P+ Q+A+  + EPRM+
Sbjct: 6   LLEAEEKMDKAVSVAKDDFANIRTGRITPAVFGKVLVDYYGAPTPVQQLASFHIPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + +VE+ + +S+LG+NP  +G ++R   PE +E+RR  LVKVA   AE+++
Sbjct: 66  IITPYDKSSLGAVEKAVRDSDLGVNPSNDGTIIRCVFPELSEQRRRDLVKVARTKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR   D + +  + G+A ED     E D+ + T   +  +D     K+ +++  
Sbjct: 126 VSIRNIRRHAKDAIDRIVRDGEAGEDEGRRGEKDLDEATHRYVSQVDELLRIKESDLLSV 185


>gi|154506087|ref|ZP_02042825.1| hypothetical protein RUMGNA_03629 [Ruminococcus gnavus ATCC 29149]
 gi|153793586|gb|EDN76006.1| hypothetical protein RUMGNA_03629 [Ruminococcus gnavus ATCC 29149]
          Length = 183

 Score =  227 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   D+M  TI+ L  ++  +R GR +P +LD + V+ YG   P+ Q AN++V E RM+
Sbjct: 5   LKVYDDKMTKTINNLGSELAAIRAGRANPHVLDKLTVDYYGVPTPIQQAANISVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K M+  +E+ I  S++G+NP  +G V+R+  PE TEERR  LVK      E +K
Sbjct: 65  QIQPWEKSMLKEIEKAILMSDIGINPTNDGTVVRLMFPELTEERRKELVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRDG D  KK  K  + SED +  LE+ +QK+TD  I  +D   E K KE++  
Sbjct: 125 VAIRNIRRDGNDAFKKL-KGTEISEDGIKDLEDSLQKLTDKYIAEVDKAVEAKSKEVLTV 183


>gi|284992372|ref|YP_003410926.1| ribosome recycling factor [Geodermatophilus obscurus DSM 43160]
 gi|284065617|gb|ADB76555.1| ribosome recycling factor [Geodermatophilus obscurus DSM 43160]
          Length = 185

 Score =  227 bits (580), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   +S  ++D+ ++RTGR +PSM + + V+ YG+  P+ Q++++TV E RM 
Sbjct: 6   LLDAEERMDKALSVAREDLGSVRTGRAAPSMFNKILVDYYGAPTPVPQMSSITVPEARMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   ++++E+ I +S+LG+NP  +GQ++R+  P+ TEERR  LVK A A  E +K
Sbjct: 66  VIKPYDTGQLSAIEKAIRDSDLGVNPTNDGQIIRVVFPQLTEERRRDLVKQARAKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR   + L +  K G+A ED V   E ++  +T      ID   + K+ E++  
Sbjct: 126 VAIRNVRRRAKEELDRIAKDGEAGEDDVRRAEKELDDLTAKHTHGIDEAVKNKENELLEV 185


>gi|170723240|ref|YP_001750928.1| ribosome recycling factor [Pseudomonas putida W619]
 gi|229564262|sp|B1JBQ7|RRF_PSEPW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169761243|gb|ACA74559.1| ribosome recycling factor [Pseudomonas putida W619]
          Length = 185

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRMG +I  L +++ ++RTGR  PS+LD VKV A+GS +PLNQVA V+V + R L 
Sbjct: 7   KDAQDRMGKSIEALGRNLASIRTGRAHPSILDSVKVPAWGSEMPLNQVAAVSVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQASAVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD +  LKK  K  + SED      ++IQK+TD  +  ID+ F+ K+K+++  
Sbjct: 127 AVRNVRRDALADLKKLTKDKEISEDEERRAADEIQKLTDKFVAEIDAAFKAKEKDLLAV 185


>gi|78212260|ref|YP_381039.1| ribosome recycling factor [Synechococcus sp. CC9605]
 gi|123578616|sp|Q3ALP8|RRF_SYNSC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78196719|gb|ABB34484.1| ribosome recycling factor [Synechococcus sp. CC9605]
          Length = 182

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 61/179 (34%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   QDLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +D +KK  K G+ SED     ++ +QK  D  I  ++     K+ +I+  
Sbjct: 124 ALRNLRRDAIDKIKKQEKEGEFSEDQSRDEQDGVQKTLDKFIAELEKHLASKEADILKV 182


>gi|298370305|ref|ZP_06981621.1| ribosome recycling factor [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281765|gb|EFI23254.1| ribosome recycling factor [Neisseria sp. oral taxon 014 str. F0314]
          Length = 185

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVAN+T+++ R + 
Sbjct: 7   KTAEGKMQRSLEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANITLVDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFESNMAAKVEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRNEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEVSEDEARRGEEAVQKLTDKYISEADKILAAKEEDLMAV 185


>gi|167766543|ref|ZP_02438596.1| hypothetical protein CLOSS21_01049 [Clostridium sp. SS2/1]
 gi|317498945|ref|ZP_07957228.1| ribosome recycling factor [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711666|gb|EDS22245.1| hypothetical protein CLOSS21_01049 [Clostridium sp. SS2/1]
 gi|291558581|emb|CBL37381.1| ribosome recycling factor [butyrate-producing bacterium SSC/2]
 gi|316893778|gb|EFV15977.1| ribosome recycling factor [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 181

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +D+M  ++  +  D MT+R GR +P +LD VKV+ YG   P+ QV NV+V E R +
Sbjct: 2   LKQFEDKMQKSLDSMANDFMTIRAGRANPHVLDKVKVDYYGVATPVAQVGNVSVPEARTI 61

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+  ++  +E+ I  S++G+ P  +G+ +R+  P+ TEERR  L K      E++K
Sbjct: 62  MIQPWEPNLLKEIEKAILVSDIGITPTNDGKAIRLNFPDLTEERRKELAKDVKKRGEEAK 121

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D +KK  K+G  ++D     E+ +QK+TD  IK ID   + K KEIM  
Sbjct: 122 VAVRNIRRDANDFVKKQNKAGDLNDDQAKDEEDKVQKMTDKYIKQIDEAVDAKSKEIMTV 181


>gi|114768798|ref|ZP_01446424.1| ribosome recycling factor [alpha proteobacterium HTCC2255]
 gi|114549715|gb|EAU52596.1| ribosome recycling factor [alpha proteobacterium HTCC2255]
          Length = 183

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 90/186 (48%), Positives = 127/186 (68%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+  ID+  I+ RM   +  +K +   LRTGR S S+LD + V AYG+  PLNQ A + V
Sbjct: 1   MSDDIDIDAIEKRMNGAVLAMKSEFQALRTGRASASLLDKIMVNAYGAMTPLNQCAGINV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRM+ V+VWDK ++ SV++ I ESNLG+NP+ +G +LR+P+PE  EERR+ L KVA  
Sbjct: 61  PEPRMITVTVWDKTLIDSVDKAIRESNLGINPVGDGMMLRLPIPELNEERRIELTKVAGG 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE ++I+VRN+RRDGMD +K   KS + SED      ++IQ++T+ +IK ID   E+K+
Sbjct: 121 YAESARIAVRNVRRDGMDQVK---KSDELSEDDQKIWSDEIQELTNVSIKKIDEVLEQKQ 177

Query: 181 KEIMHF 186
            EIM  
Sbjct: 178 AEIMQV 183


>gi|291299707|ref|YP_003510985.1| ribosome recycling factor [Stackebrandtia nassauensis DSM 44728]
 gi|290568927|gb|ADD41892.1| ribosome recycling factor [Stackebrandtia nassauensis DSM 44728]
          Length = 185

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M  +I   K++   +RTGR S +M   + V+ YGS  PL Q+A++ V EPRM+
Sbjct: 6   LFDAEEKMDGSIEHAKEEFAAIRTGRASAAMFSKIVVDYYGSPTPLPQLASIAVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D     ++ER I +S+LG+NP  EG  LR+ VP+ TEERR  ++KVA   AE+SK
Sbjct: 66  IIKPYDVSQTDALERAIRDSDLGVNPNNEGNQLRLFVPQMTEERRREMIKVARHKAEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RR   + L++    G+  ED     E D+ ++T   IK ID     K+ E++  
Sbjct: 126 IAVRNVRRKAKEELERLVSDGEVGEDEGHRAEKDLDELTQRHIKLIDELVAHKETELLEI 185


>gi|168184638|ref|ZP_02619302.1| ribosome recycling factor [Clostridium botulinum Bf]
 gi|170756757|ref|YP_001781975.1| ribosome recycling factor [Clostridium botulinum B1 str. Okra]
 gi|226949785|ref|YP_002804876.1| ribosome recycling factor [Clostridium botulinum A2 str. Kyoto]
 gi|237795867|ref|YP_002863419.1| ribosome recycling factor [Clostridium botulinum Ba4 str. 657]
 gi|229564223|sp|B1II63|RRF_CLOBK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809503|sp|C1FSK2|RRF_CLOBJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|259494535|sp|C3L0C9|RRF_CLOB6 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169121969|gb|ACA45805.1| ribosome recycling factor [Clostridium botulinum B1 str. Okra]
 gi|182672259|gb|EDT84220.1| ribosome recycling factor [Clostridium botulinum Bf]
 gi|226841674|gb|ACO84340.1| ribosome recycling factor [Clostridium botulinum A2 str. Kyoto]
 gi|229263177|gb|ACQ54210.1| ribosome recycling factor [Clostridium botulinum Ba4 str. 657]
 gi|322806698|emb|CBZ04267.1| ribosome recycling factor [Clostridium botulinum H04402 065]
          Length = 184

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 120/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG TI  LK+++ +++ GR +P+MLD ++ E YGS  PLNQ+ N++V E R+L
Sbjct: 6   LKKADEKMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  ++++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK IDS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKD-DVSEDDIKKAEDDIQKKTDKYIKEIDSIISAKEKEILSI 184


>gi|121638763|ref|YP_978987.1| ribosome recycling factor [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224991255|ref|YP_002645944.1| ribosome recycling factor [Mycobacterium bovis BCG str. Tokyo 172]
 gi|166230800|sp|A1KMM6|RRF_MYCBP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809522|sp|C1AFZ7|RRF_MYCBT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|121494411|emb|CAL72892.1| Ribosome recycling factor frr [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|224774370|dbj|BAH27176.1| ribosome recycling factor [Mycobacterium bovis BCG str. Tokyo 172]
          Length = 185

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++  + D+ T+RTGR +P M   + ++ YG+   + Q+A++ V E R++
Sbjct: 6   LFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATLITQLASINVPEARLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I  S+LG+NP  +G ++R+ VP+ TEERR  LVK A    E++K
Sbjct: 66  VIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR  M+ L + RK G+A ED V   E D+ K T   +  ID   + K+ E++  
Sbjct: 126 VSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV 185


>gi|168180688|ref|ZP_02615352.1| ribosome recycling factor [Clostridium botulinum NCTC 2916]
 gi|182668443|gb|EDT80422.1| ribosome recycling factor [Clostridium botulinum NCTC 2916]
          Length = 184

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 120/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG TI  LK+++ +++ GR +P+MLD ++ E YGS  PLNQ+ N++V E R+L
Sbjct: 6   LKKADEKMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  ++++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKGALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK IDS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKD-DVSEDDIKKAEDDIQKKTDKYIKEIDSIISAKEKEILSI 184


>gi|313677103|ref|YP_004055099.1| ribosome recycling factor [Marivirga tractuosa DSM 4126]
 gi|312943801|gb|ADR22991.1| ribosome recycling factor [Marivirga tractuosa DSM 4126]
          Length = 186

 Score =  227 bits (580), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 74/186 (39%), Positives = 113/186 (60%), Gaps = 3/186 (1%)

Query: 3   QVIDL--QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + IDL     K+ M   I   K ++  +R G+ SP+MLD + V+ YG+  P+NQVA+++ 
Sbjct: 2   EEIDLVLDEAKELMEKAIQHTKSNLQKIRAGKASPAMLDGLMVDYYGNDTPINQVASIST 61

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R +++  W+K ++  +ER I  S+LG  P  +G+++RI +P  TEERR++L K A  
Sbjct: 62  PDARSIIIKPWEKNIIGEIERAIINSDLGFTPQNDGEIVRINIPPLTEERRISLTKQAKN 121

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  KIS+RN R+D  D LK+ +K G  SED V   E+ +Q +T+   K ID   E K+
Sbjct: 122 EAEDGKISIRNARKDANDQLKQLQKEG-ISEDDVKRGEDKVQSLTNDFTKKIDDILEHKE 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMTV 186


>gi|322420123|ref|YP_004199346.1| ribosome recycling factor [Geobacter sp. M18]
 gi|320126510|gb|ADW14070.1| ribosome recycling factor [Geobacter sp. M18]
          Length = 185

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + ++   M  TI  L+KD   +RTGR S S+LD +KV++YG+  PLNQVA + V E R +
Sbjct: 6   ISSMNVHMDKTIESLRKDYQKVRTGRASTSLLDEIKVDSYGNLSPLNQVATLAVPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD +M+  +E+ I  SNLGLNP  +G+++R+ +P  TEERR  +VK     AE+SK
Sbjct: 66  TIQPWDSKMIQPIEKAIMNSNLGLNPANDGKMIRLTLPPLTEERRKDIVKQLKRDAEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +D LKK  K  + SED +   E D+Q  T++ +  ID     K+KE++  
Sbjct: 126 VALRNIRRDAIDQLKKLEKDKQISEDELKRAEKDVQDSTNAHVAKIDEVLVHKEKEVLEV 185


>gi|302335682|ref|YP_003800889.1| ribosome recycling factor [Olsenella uli DSM 7084]
 gi|301319522|gb|ADK68009.1| ribosome recycling factor [Olsenella uli DSM 7084]
          Length = 181

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 5/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+Q  D  + +  M   ++ L+ +   +RTGR +  +LD ++V+ YG   P+ Q+A V V
Sbjct: 1   MSQYSD--SARKHMDKCLNALRGNFARVRTGRANAHVLDDIRVDYYGQMTPITQLAGVKV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E  MLVV  WDK  + S+E+ I  S+LG+ P  +G  +R+P P+ TEERR  LVK  H 
Sbjct: 59  PEASMLVVEPWDKSALKSIEKAIESSDLGITPSNDGVSIRLPFPKPTEERRKELVKECHK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE++K+++RN RRD      K+ +S + SED VA  +  IQK+TD  +  +D   + K 
Sbjct: 119 YAEEAKVAIRNARRDANG---KAERSEELSEDEVAREKKGIQKVTDDYVAKVDQMLKAKT 175

Query: 181 KEIMHF 186
            E+M  
Sbjct: 176 AEVMEI 181


>gi|297571182|ref|YP_003696956.1| ribosome recycling factor [Arcanobacterium haemolyticum DSM 20595]
 gi|296931529|gb|ADH92337.1| ribosome recycling factor [Arcanobacterium haemolyticum DSM 20595]
          Length = 185

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++MG  I   + D   +R+GR +P +   + V+ YG+  PL Q+A V+V E R +
Sbjct: 6   LLEAEEKMGKAIEVAQSDFSKIRSGRANPELFTSLVVDYYGAPTPLQQLATVSVPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D+  +  +ER I ES+LG+NP  +GQVLRI +P  TEERR   VK+A   AE ++
Sbjct: 66  LISPYDRSAMKDIERAIQESDLGVNPTDDGQVLRINLPALTEERRREYVKLAKGKAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+R IRR   + L K +K G A ED V   E +++ +T   ++N+DS  E K+KE+M  
Sbjct: 126 ISIRAIRRKAKETLDKIKKDGDAGEDDVERAEKELESLTKKFVENVDSLLESKEKELMEI 185


>gi|315924376|ref|ZP_07920598.1| ribosome recycling factor [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622255|gb|EFV02214.1| ribosome recycling factor [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 185

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M   +  L   + TLR GR +  +LD V V+ YG+   +NQ+A V   E R++
Sbjct: 6   MQRAEEKMNKALENLSGSLNTLRAGRANAHILDKVTVDYYGAPTAINQLATVAAPEARLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  +D   + ++E+ I  ++LG NP  +G+++R+ VP+ TEERR  LVK+   Y E+ K
Sbjct: 66  TVQPYDTTALPAIEKAILTADLGFNPSNDGKIIRLAVPQLTEERRKELVKLTKKYGEECK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR     LK ++K G  SED +   +N +QK+TD  IK ID+  + K++EI+  
Sbjct: 126 VAMRNIRRKSDQKLKTAQKDGDISEDEMHDGQNSVQKLTDKKIKEIDAVLKAKEEEILAV 185


>gi|270307747|ref|YP_003329805.1| ribosome recycling factor [Dehalococcoides sp. VS]
 gi|270153639|gb|ACZ61477.1| ribosome recycling factor [Dehalococcoides sp. VS]
          Length = 185

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 62/186 (33%), Positives = 117/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++  LQ  + +M  ++  L +++  +RTGR SP++++ ++VE  G   P+N +A ++ 
Sbjct: 2   INEI--LQKSEKKMTASLDVLSQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLAGISA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +PR + +  WDK  ++++E+ I +S+LGL P  +G ++R+ +P  +EERR  ++K+ + 
Sbjct: 60  PDPRYITIQPWDKSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVNK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ KI++RN+RRD MD +KK  K+ + S+D +    + +QKITDS I   D    +K+
Sbjct: 120 RLEEDKIAMRNVRRDAMDEMKKLEKAKEISQDDLKRGSDQLQKITDSFIAKADKLGADKE 179

Query: 181 KEIMHF 186
            E+   
Sbjct: 180 TELKQV 185


>gi|50084551|ref|YP_046061.1| ribosome recycling factor [Acinetobacter sp. ADP1]
 gi|60390252|sp|Q6FCH2|RRF_ACIAD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|49530527|emb|CAG68239.1| ribosome releasing factor [Acinetobacter sp. ADP1]
          Length = 184

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 112/179 (62%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV + + R LV
Sbjct: 7   KDSEQRMQKTLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGIEDSRTLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA + AE +K+
Sbjct: 67  VQPFERTMVSAIDKAIRESDLGLNPITA-DSIRVPLPALTEETRRDMQKVARSEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  LK   K  + SED      +DIQKITD  +  +D     K+ E+M  
Sbjct: 126 AIRNIRRDVLGDLKSLLKDKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELMKV 184


>gi|297156857|gb|ADI06569.1| ribosome recycling factor [Streptomyces bingchenggensis BCW-1]
          Length = 185

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 59/174 (33%), Positives = 102/174 (58%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAMTPINQLASFSVPEPRMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE TE+RR   +KVA    E +KIS+R++
Sbjct: 72  KTALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEQRRKEFIKVAKGKGEDAKISIRSV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   + + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 132 RRKAKESIDKLIKDGEVGEDEGRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|167626815|ref|YP_001677315.1| ribosome recycling factor [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667396|ref|ZP_04754974.1| ribosome recycling factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875945|ref|ZP_05248655.1| ribosome recycling factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|189044055|sp|B0U0Z8|RRF_FRAP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167596816|gb|ABZ86814.1| ribosome recycling factor [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254841966|gb|EET20380.1| ribosome recycling factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 185

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 110/178 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  T+  L  D+  +RTGR  P +L  V ++ YGS  P+ QVANVTVL+ R L
Sbjct: 6   LKDAENRMSKTLEVLADDLAKIRTGRAHPDILAHVTIDYYGSATPITQVANVTVLDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K +   +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+  +  E  +
Sbjct: 66  GITPWEKGLAGKIEKAIITSDLGLNPTNLGDSLRVPMPALNEERRKELVKLVKSETESGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD    +K+  K  + +ED     E++IQKITD  I   D+   +K++++M
Sbjct: 126 VSIRNIRRDANGDIKELLKEKEITEDEAKRAEDNIQKITDKMIAQADALAVKKEQDLM 183


>gi|104783192|ref|YP_609690.1| ribosome recycling factor [Pseudomonas entomophila L48]
 gi|122402174|sp|Q1I629|RRF_PSEE4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|95112179|emb|CAK16906.1| ribosome releasing factor [Pseudomonas entomophila L48]
          Length = 185

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 117/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG +I  L +++ ++RTGR  PS+LD VKV A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMGKSIEALGRNLASIRTGRAHPSILDSVKVPAWGSDMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A + AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQASSVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD +  LKK  K  + SED      ++IQK+TD  +  ID+ F+ K+K+++  
Sbjct: 127 AVRNVRRDALADLKKLTKDKEISEDEERRAADEIQKLTDKFVAEIDAAFKAKEKDLLAV 185


>gi|261364373|ref|ZP_05977256.1| ribosome recycling factor [Neisseria mucosa ATCC 25996]
 gi|288567641|gb|EFC89201.1| ribosome recycling factor [Neisseria mucosa ATCC 25996]
          Length = 185

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAESKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV  + AE+ ++
Sbjct: 67  VKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRSEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKEKEISEDEARRGEEAVQKLTDKYIAEADKTLAAKEEDLMAI 185


>gi|15676114|ref|NP_273245.1| ribosome recycling factor [Neisseria meningitidis MC58]
 gi|121634062|ref|YP_974307.1| ribosome recycling factor [Neisseria meningitidis FAM18]
 gi|218767120|ref|YP_002341632.1| ribosome recycling factor [Neisseria meningitidis Z2491]
 gi|296313408|ref|ZP_06863349.1| ribosome recycling factor [Neisseria polysaccharea ATCC 43768]
 gi|54039296|sp|P66737|RRF_NEIMB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|54042004|sp|P66736|RRF_NEIMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230807|sp|A1KRL9|RRF_NEIMF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|7225406|gb|AAF40644.1| ribosome recycling factor [Neisseria meningitidis MC58]
 gi|120865768|emb|CAM09497.1| ribosome recycling factor [Neisseria meningitidis FAM18]
 gi|121051128|emb|CAM07399.1| ribosome recycling factor [Neisseria meningitidis Z2491]
 gi|261391723|emb|CAX49172.1| ribosome recycling factor (ribosome-releasing factor; RRF)
           [Neisseria meningitidis 8013]
 gi|296840119|gb|EFH24057.1| ribosome recycling factor [Neisseria polysaccharea ATCC 43768]
 gi|319411327|emb|CBY91738.1| ribosome recycling factor (ribosome-releasing factor; RRF)
           [Neisseria meningitidis WUE 2594]
 gi|325129106|gb|EGC51955.1| ribosome recycling factor [Neisseria meningitidis N1568]
 gi|325133101|gb|EGC55773.1| ribosome recycling factor [Neisseria meningitidis M6190]
 gi|325139079|gb|EGC61625.1| ribosome recycling factor [Neisseria meningitidis ES14902]
 gi|325141201|gb|EGC63701.1| ribosome recycling factor [Neisseria meningitidis CU385]
 gi|325145384|gb|EGC67661.1| ribosome recycling factor [Neisseria meningitidis M01-240013]
 gi|325199400|gb|ADY94855.1| ribosome recycling factor [Neisseria meningitidis H44/76]
 gi|325202978|gb|ADY98432.1| ribosome recycling factor [Neisseria meningitidis M01-240149]
 gi|325203308|gb|ADY98761.1| ribosome recycling factor [Neisseria meningitidis M01-240355]
 gi|325205280|gb|ADZ00733.1| ribosome recycling factor [Neisseria meningitidis M04-240196]
          Length = 185

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLMAI 185


>gi|325001877|ref|ZP_08122989.1| ribosome recycling factor [Pseudonocardia sp. P1]
          Length = 185

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++++M   +   + D+  +RTGR +PSM   + V+ YG+  PLNQ+A+V++ E RM 
Sbjct: 6   LFDVEEKMEKAVGVARDDLTGVRTGRATPSMFSRIVVDYYGAATPLNQLASVSIPEARMA 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   + ++E+ I ES+LG+NP  +GQ++R+ +P+ +EERR  +VKVA    E ++
Sbjct: 66  VIKPYDASQLKAMEKAIAESDLGVNPSNDGQIIRVIIPQLSEERRRDMVKVARGKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +R +RR  MD L + ++ G+A ED V   E ++Q +TD  +  ID   + K+ E++  
Sbjct: 126 VVMRGLRRKAMDELHRIQRDGEAGEDEVVRGEKELQVLTDRYVAQIDELVKNKESELLEV 185


>gi|118594910|ref|ZP_01552257.1| ribosome releasing factor [Methylophilales bacterium HTCC2181]
 gi|118440688|gb|EAV47315.1| ribosome releasing factor [Methylophilales bacterium HTCC2181]
          Length = 184

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 70/177 (39%), Positives = 114/177 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N +++M ++I  LK ++  +RTGR    +LD + V+ YGS   LNQVA VT+ +   + 
Sbjct: 6   KNTRNKMQNSIDALKGNLSKIRTGRAHTGVLDHINVDYYGSQTALNQVAGVTLGDATTIN 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  ++K M+A +E+ I ES+LGLNP   G ++R+P+P  TEERR  L+KV  +  E +KI
Sbjct: 66  IQPYEKTMIAVIEKAIRESDLGLNPATSGDLIRVPMPPLTEERRKDLIKVVKSEGENTKI 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++RN+RRD  + LKK  K  + SED     + ++QK+TD  I ++D   E K+K+++
Sbjct: 126 AIRNVRRDANEALKKLTKEKEISEDDERRAQEEVQKMTDQFIVSVDQTIETKEKDLL 182


>gi|116749216|ref|YP_845903.1| ribosome recycling factor [Syntrophobacter fumaroxidans MPOB]
 gi|166231522|sp|A0LJ66|RRF_SYNFM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116698280|gb|ABK17468.1| ribosome recycling factor [Syntrophobacter fumaroxidans MPOB]
          Length = 185

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
             + +DRM   +  L+ D   LRTGR S S++D ++ E YG+   LNQ+A +T+ EPR +
Sbjct: 6   FADARDRMSKALDNLETDYKRLRTGRASVSLVDGIRAEYYGTPTALNQLATITIPEPRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD  ++  +E+ I +S LGL P+ +G+V+RI +P  T +RR  LVKV    +E+SK
Sbjct: 66  MIQPWDTSVIGEIEKSILKSELGLTPMSDGKVIRINIPVLTADRRRELVKVVKKMSEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + +K  +K  + SED     + + Q+ITD  IK ID  +  K+KEI+  
Sbjct: 126 VAVRNIRRDVNEMIKDLKKEKEISEDEQFKAQEETQRITDDFIKKIDVVYSAKEKEILEI 185


>gi|126726888|ref|ZP_01742727.1| ribosome recycling factor [Rhodobacterales bacterium HTCC2150]
 gi|126703846|gb|EBA02940.1| ribosome recycling factor [Rhodobacterales bacterium HTCC2150]
          Length = 188

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 87/176 (49%), Positives = 122/176 (69%), Gaps = 1/176 (0%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           K RM   ++ LK +  TLRTGR + +MLD + VEAYG   P+NQV  V V EPRML ++V
Sbjct: 14  KRRMDGAMTSLKSEFQTLRTGRAAATMLDPISVEAYGQRTPINQVGTVNVPEPRMLTINV 73

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK MV +VE+ I ES LG+NP+V+G ++R+P+PE  EERR  L KVA  YAE +K++VR
Sbjct: 74  WDKTMVQAVEKAIRESGLGINPVVDGTIIRLPIPELNEERRRELTKVAAQYAESAKVAVR 133

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+RRDGMD +KK++ +G   ED      ++IQ++TD+ I  +D+    K++EIM  
Sbjct: 134 NVRRDGMDQIKKAKGNG-MGEDDQKIWADEIQEVTDAAIAAVDASLAAKQEEIMQV 188


>gi|254430178|ref|ZP_05043881.1| ribosome recycling factor [Cyanobium sp. PCC 7001]
 gi|197624631|gb|EDY37190.1| ribosome recycling factor [Cyanobium sp. PCC 7001]
          Length = 179

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 63/178 (35%), Positives = 111/178 (62%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           +++  M  ++    ++  T+RTGR +PS+LD + VE YG+  PL  +A+++  + + + +
Sbjct: 2   DLEASMRKSVDAALRNFNTIRTGRANPSLLDKISVEYYGAETPLKSLASLSTPDSQTIQI 61

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   +  +E+ I  S+LGL    +G+V+RI +P  TE+RR  L K+A  YAE+ K++
Sbjct: 62  QPFDTGAMGLIEKAIAMSDLGLTCNNDGRVIRINIPPLTEDRRKELCKIAAKYAEEGKVA 121

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RN RRDG+D +KK  K G+ SED     ++ +QK+TD  I+ ++   +EK+ EI+  
Sbjct: 122 LRNNRRDGIDRIKKQEKDGELSEDQSRDEQDKVQKLTDKFIEELEKHLKEKEAEILKV 179


>gi|160944136|ref|ZP_02091366.1| hypothetical protein FAEPRAM212_01638 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444812|gb|EDP21816.1| hypothetical protein FAEPRAM212_01638 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105052|emb|CBL02596.1| ribosome recycling factor [Faecalibacterium prausnitzii SL3/3]
          Length = 184

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 70/181 (38%), Positives = 114/181 (62%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           + +  +D+M  ++  L +++  +R GR +P++LD V V+ YG+  P+ Q+A V V E R 
Sbjct: 4   NTKVYEDKMKSSVEHLSRELAAVRAGRANPAVLDKVVVDYYGAPTPIQQLAAVAVSEART 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L ++ WD+ ++  + + I  S++G+ PI +G  +R+  P   EERR  L K      E +
Sbjct: 64  LTITPWDRTLLRPISKAIMASDVGITPIDDGVTIRLNFPAPNEERRKQLAKEVSKLGEDA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K++VRN+RRD MD  K  +K+G+ +ED   ++E D+QK+TD  IKNID+  EEK+KEIM 
Sbjct: 124 KVAVRNVRRDAMDKAKAMKKAGELTEDTQKTMEEDVQKLTDKYIKNIDAAVEEKQKEIMA 183

Query: 186 F 186
            
Sbjct: 184 V 184


>gi|33866285|ref|NP_897844.1| ribosome recycling factor [Synechococcus sp. WH 8102]
 gi|39932068|sp|Q7U5F4|RRF_SYNPX RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33639260|emb|CAE08268.1| ribosome recycling factor protein Rrf [Synechococcus sp. WH 8102]
          Length = 182

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 61/179 (34%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   QDLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +D +KK  K G  SED     ++ +QK  D  I  ++    +K+ +I+  
Sbjct: 124 ALRNLRRDAIDKVKKQEKDGDFSEDQSRDEQDAVQKTLDKFIAELEKHLADKEADILKV 182


>gi|326490946|dbj|BAJ90140.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326512904|dbj|BAK03359.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 266

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 63/176 (35%), Positives = 107/176 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  K++M   I  ++ +  T+RTGR +PSMLD ++VE YG+ V L  +A V   +   L+
Sbjct: 88  EQAKEKMEKAIETVQSNFNTVRTGRANPSMLDRIEVEYYGTPVNLKTIAQVNTPDATSLL 147

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK  +  +E+ I  +N+G+ P  +G+V+R+ VP  T +RR  + K     +E+ K+
Sbjct: 148 IQPYDKSCLKLIEKAIVAANIGVTPSNDGEVIRVTVPPLTSDRRKEMTKTVAKLSEEGKV 207

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++RNIRRD +    K  K  K SED V  L  D+QKITD  +K +++  ++K++E+
Sbjct: 208 AIRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKITDEYMKKVEAIQKQKEQEL 263


>gi|261378087|ref|ZP_05982660.1| ribosome recycling factor [Neisseria cinerea ATCC 14685]
 gi|269145536|gb|EEZ71954.1| ribosome recycling factor [Neisseria cinerea ATCC 14685]
          Length = 185

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAESKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV  + AE+ ++
Sbjct: 67  VKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRSEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLMAI 185


>gi|253581352|ref|ZP_04858578.1| ribosome recycling factor [Fusobacterium varium ATCC 27725]
 gi|251836716|gb|EES65250.1| ribosome recycling factor [Fusobacterium varium ATCC 27725]
          Length = 188

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 85/176 (48%), Positives = 117/176 (66%), Gaps = 2/176 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
             ++MG  I   K    ++R GR S SMLD V+VE YGS +PLNQV +V+  E R+LV+ 
Sbjct: 10  CNEKMGKAIEATKHKFTSIRAGRASVSMLDSVRVEQYGSEMPLNQVGSVSAPEARLLVID 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK +++ +E+ I  +NLGL P  +G+V+R+ +PE T ERR   VK+A   AE  K++V
Sbjct: 70  PWDKSLISKIEKAIMAANLGLTPNNDGKVIRLVMPELTAERRKEYVKMAKTEAENGKVAV 129

Query: 130 RNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RNIR+DG + LKK  K  +   SED V +LE +IQKITD+ IK ID  F +K+KEI
Sbjct: 130 RNIRKDGNNDLKKLSKDKENPISEDEVKTLEAEIQKITDAHIKVIDDLFAKKEKEI 185


>gi|269123002|ref|YP_003305579.1| ribosome recycling factor [Streptobacillus moniliformis DSM 12112]
 gi|268314328|gb|ACZ00702.1| ribosome recycling factor [Streptobacillus moniliformis DSM 12112]
          Length = 185

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 70/174 (40%), Positives = 109/174 (62%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M  T+   K     +R GR + SM+D V V+ YG   PLNQV +VT  E R+LV+  WD
Sbjct: 12  KMEKTLESTKVRFSHVRAGRANVSMVDGVLVDYYGQMSPLNQVGSVTAPEARLLVIDPWD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K ++ ++E+ I  +N+G NP  +G+++R+ VPE TE+RR   VKV    AE+ K++ RNI
Sbjct: 72  KSLIPAIEKAILAANIGFNPSNDGRIIRLVVPELTEDRRKEYVKVVKKEAEEGKVAARNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           R+D  + ++K  K  + +ED +  +E  IQK+TD  IK+ID    +K+KE++  
Sbjct: 132 RKDYNNKVRKMEKDSEITEDDLKHVEEKIQKLTDECIKHIDELLAKKEKELLSI 185


>gi|325197474|gb|ADY92930.1| ribosome recycling factor [Neisseria meningitidis G2136]
          Length = 185

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFESNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLMAI 185


>gi|159903064|ref|YP_001550408.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9211]
 gi|226749934|sp|A9BEE4|RRF_PROM4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|159888240|gb|ABX08454.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9211]
          Length = 182

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 60/179 (33%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + ++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   KELEQNMRKSVEAAQRNFNTIRTGRANTSLLDRLTVEYYGADTPLKSLATISTPDSQTIS 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +  +E+ I  S+LG  P  +G+++RI +P  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDLSSLVLIEKSIAMSDLGFTPNNDGKIIRINIPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD ++ +KKS K  + SED     ++++QK+TD  I  I+    +K++EI+  
Sbjct: 124 ALRNIRRDAIERIKKSEKESEISEDQSRDEQDNVQKLTDRFITEIEKNLSDKEQEILKV 182


>gi|124025289|ref|YP_001014405.1| ribosome recycling factor [Prochlorococcus marinus str. NATL1A]
 gi|166230815|sp|A2C0Y0|RRF_PROM1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123960357|gb|ABM75140.1| Ribosome recycling factor [Prochlorococcus marinus str. NATL1A]
          Length = 182

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q +K+ M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A +T  + + + 
Sbjct: 4   QELKNTMSKSVEAAQRNFNTIRTGRANTSLLDRISVEYYGAETPLKSLATITTPDSQTIA 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S+LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDLGSLASIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRR+ +D +KKS K G  SED     +  IQK TD+ IK+I+    EK+ EI+  
Sbjct: 124 ALRNIRREAIDRVKKSEKDGDLSEDQSRDEQEKIQKETDNFIKDIEKKLSEKEAEILKV 182


>gi|260588561|ref|ZP_05854474.1| ribosome recycling factor [Blautia hansenii DSM 20583]
 gi|331082136|ref|ZP_08331264.1| ribosome recycling factor [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260541036|gb|EEX21605.1| ribosome recycling factor [Blautia hansenii DSM 20583]
 gi|330405731|gb|EGG85261.1| ribosome recycling factor [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 185

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +M  T+  L K+++T+R GR +P +LD + V+ YG+  PL QVAN+TV E RM+
Sbjct: 7   IQVYEHKMTKTLEGLTKELVTIRAGRANPHILDKLTVDYYGTPTPLQQVANITVPEARMI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++  + + I  S+L LNP  +G+++R+ +PE TEERR  LVK      E +K
Sbjct: 67  QIQPWEASLIKEISKAILSSDLNLNPNSDGKIIRLVLPELTEERRKELVKDVKKKGEAAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  D  KK  K    SED +  LE  IQKITD  +K I+   EEK KEI+  
Sbjct: 127 VAVRNVRRDANDAFKKLAKQ-DVSEDEIKELEEQIQKITDKFVKEIEKAVEEKSKEILTV 185


>gi|269795652|ref|YP_003315107.1| ribosome recycling factor [Sanguibacter keddieii DSM 10542]
 gi|269097837|gb|ACZ22273.1| ribosome recycling factor [Sanguibacter keddieii DSM 10542]
          Length = 185

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 99/180 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M   I   K    ++RTGR + +M   + VE YG+  PL Q+A+    E R +
Sbjct: 6   LLEAEDKMDKAIEVAKNGFASIRTGRANSAMFSRITVEYYGAQTPLQQLASFNTPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +DK  + ++ER + +S+LG+NP  +G V+RI +P  T ERR   VK+A   AE ++
Sbjct: 66  LVVPFDKTALPAIERALRDSDLGVNPSNDGNVIRIVLPVLTAERRKEYVKLAKTQAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVR +RR   D L K  K G A ED     E +++ IT   +  +D     K+ E++  
Sbjct: 126 VSVRAVRRKAKDTLDKLVKDGDAGEDEGVRAEKELEAITKRHVDVVDQLLASKEAELLEV 185


>gi|72383689|ref|YP_293044.1| ribosome recycling factor [Prochlorococcus marinus str. NATL2A]
 gi|123620292|sp|Q46GQ5|RRF_PROMT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|72003539|gb|AAZ59341.1| ribosome recycling factor [Prochlorococcus marinus str. NATL2A]
          Length = 182

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q +K  M  +I   +++  T+RTGR + S+LD + VE YG+  PL  +A +T  + + + 
Sbjct: 4   QELKTTMSKSIEAAQRNFNTIRTGRANTSLLDRISVEYYGAETPLKSLATITTPDSQTIA 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S+LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDLGSLASIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRR+ +D +KKS K G  SED     +  IQK TD+ IK+I+    EK+ EI+  
Sbjct: 124 ALRNIRREAIDRVKKSEKDGDLSEDQSRDEQETIQKETDNFIKDIEKKLSEKEAEILKV 182


>gi|283783270|ref|YP_003374024.1| ribosome recycling factor [Gardnerella vaginalis 409-05]
 gi|297243503|ref|ZP_06927435.1| ribosome recycling factor [Gardnerella vaginalis AMD]
 gi|298252794|ref|ZP_06976588.1| ribosome recycling factor [Gardnerella vaginalis 5-1]
 gi|283442171|gb|ADB14637.1| ribosome recycling factor [Gardnerella vaginalis 409-05]
 gi|296888548|gb|EFH27288.1| ribosome recycling factor [Gardnerella vaginalis AMD]
 gi|297533158|gb|EFH72042.1| ribosome recycling factor [Gardnerella vaginalis 5-1]
          Length = 184

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 70/186 (37%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +ID    +++M  ++   K++ M +RTGR +P++L+ + V+ YG+  P+  VA++ V
Sbjct: 1   MSAIID--QAREQMNKSVEATKENFMGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ I +S+LG++P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 59  PEPRTLSVTPFDASQANAVEKAIRDSDLGVSPNRDGNVIRVTMPELTEERRKEYVKLAKN 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ K++VRNIRR   + + KS K G+  ED    L+ ++ K+T     ++D   E K+
Sbjct: 119 KAEEGKVAVRNIRRKAKESIDKSVKDGELGEDEGDRLQKELDKVTKQVTDSLDVLLEGKQ 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEV 184


>gi|124267165|ref|YP_001021169.1| ribosome recycling factor [Methylibium petroleiphilum PM1]
 gi|166230798|sp|A2SH95|RRF_METPP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|124259940|gb|ABM94934.1| ribosome recycling factor [Methylibium petroleiphilum PM1]
          Length = 186

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 74/184 (40%), Positives = 110/184 (59%), Gaps = 1/184 (0%)

Query: 4   VIDLQNI-KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + D++   + +   +I   K ++  +RTGR  P +LD V VE YGS V ++QVANV++L+
Sbjct: 3   IADIKKTFEQKSARSIESFKSELQKIRTGRAHPGILDQVHVEYYGSMVSISQVANVSLLD 62

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R + V  W+K M   +E+ I ES+LGLNP  +G++LR+P+P   EERR  L KV     
Sbjct: 63  ARTISVQPWEKGMGPKIEKAIRESDLGLNPSSQGELLRVPMPALNEERRRDLTKVVRGAG 122

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E ++I+VRN+RRD  D  KK  K    SED      +++QK+TD  I  ID   + K+ E
Sbjct: 123 EDARIAVRNLRRDANDQAKKLLKDKAISEDDERRSLDEVQKLTDRVIAEIDRLVQSKEAE 182

Query: 183 IMHF 186
           I+  
Sbjct: 183 ILAV 186


>gi|328957401|ref|YP_004374787.1| ribosome recycling factor [Carnobacterium sp. 17-4]
 gi|328673725|gb|AEB29771.1| ribosome recycling factor [Carnobacterium sp. 17-4]
          Length = 185

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 125/180 (69%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+ +K++M  T   L++++ T+R GR +  +LD + V  YG+  PL Q+A +++ EPR+L
Sbjct: 6   LETMKEKMVKTEGALQRELGTIRAGRANAGLLDRINVVYYGAPTPLKQLAQISIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  ++ +E+ I +S+LG++P  +G V+R+ +P+ TEERR  L K     AE +K
Sbjct: 66  MVTPFDKTSISDIEKAIMQSDLGISPANDGNVIRLVIPQLTEERRKELAKKVGKEAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRNIRR+ +D LKK+ K+ + ++D + + E DIQKIT++++KNID    +K+KE++  
Sbjct: 126 VSVRNIRREAIDELKKAEKNNEITQDDLRTFEEDIQKITNTSVKNIDGIAADKEKELLDV 185


>gi|315221842|ref|ZP_07863754.1| ribosome recycling factor [Streptococcus anginosus F0211]
 gi|315189075|gb|EFU22778.1| ribosome recycling factor [Streptococcus anginosus F0211]
          Length = 185

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGSIRAGRANASLLDRISVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +E  ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIEHALNASDLGITPASDGTVIRLVIPALTEETRRNLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDEAVKHIDEMTASKEKELIEV 185


>gi|318056584|ref|ZP_07975307.1| ribosome recycling factor [Streptomyces sp. SA3_actG]
 gi|318075679|ref|ZP_07983011.1| ribosome recycling factor [Streptomyces sp. SA3_actF]
 gi|333024152|ref|ZP_08452216.1| putative ribosome recycling factor [Streptomyces sp. Tu6071]
 gi|332744004|gb|EGJ74445.1| putative ribosome recycling factor [Streptomyces sp. Tu6071]
          Length = 186

 Score =  227 bits (579), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 60/174 (34%), Positives = 102/174 (58%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D+  +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 13  KMEKAVVVAKEDLAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +++S+R +
Sbjct: 73  KSALRNIEQAIRDSDLGVNPSNDGHIIRVVFPELTEERRKEFIKVARTKGEDARVSIRAV 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   D L K  K  +  ED V   E ++   T   +  +D   + K+ E++  
Sbjct: 133 RRKAKDALDKLVKDKETGEDEVRRAEKELDDTTAKYVAQVDELLKHKESELLEV 186


>gi|42519369|ref|NP_965299.1| ribosome recycling factor [Lactobacillus johnsonii NCC 533]
 gi|227890234|ref|ZP_04008039.1| ribosome recycling factor [Lactobacillus johnsonii ATCC 33200]
 gi|268319254|ref|YP_003292910.1| hypothetical protein FI9785_769 [Lactobacillus johnsonii FI9785]
 gi|47116993|sp|P61305|RRF_LACJO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|41583657|gb|AAS09265.1| ribosome recycling factor [Lactobacillus johnsonii NCC 533]
 gi|227849236|gb|EEJ59322.1| ribosome recycling factor [Lactobacillus johnsonii ATCC 33200]
 gi|262397629|emb|CAX66643.1| frr [Lactobacillus johnsonii FI9785]
 gi|329667112|gb|AEB93060.1| ribosome recycling factor [Lactobacillus johnsonii DPC 6026]
          Length = 185

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 75/182 (41%), Positives = 113/182 (62%), Gaps = 2/182 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+VI  +  KD M  +I+  +K++  +R G  + S+LD +KV  YG   PL Q+++V++ 
Sbjct: 3   NEVI--EKAKDNMKKSIAVFQKELGGIRAGVANASLLDGIKVNYYGVPTPLTQMSSVSIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+V+ +DK  +  +E  I  S+LG+ P  +G V+RI +P+ T ERR  + K     
Sbjct: 61  EARVLMVTPYDKSTLDDIEHAILASDLGITPANDGTVIRIVIPQLTGERRQEIAKQVGKL 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AEK KI+VRN+RRD MD LK+  K G  +ED   SLE  +QK+TD   K ID   ++K +
Sbjct: 121 AEKGKIAVRNVRRDAMDTLKRQEKDGDITEDEQRSLEKQVQKVTDDATKEIDKLADQKSQ 180

Query: 182 EI 183
           EI
Sbjct: 181 EI 182


>gi|253700113|ref|YP_003021302.1| ribosome recycling factor [Geobacter sp. M21]
 gi|259494543|sp|C6E515|RRF_GEOSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|251774963|gb|ACT17544.1| ribosome recycling factor [Geobacter sp. M21]
          Length = 185

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N+   MG +I  L+K+   +RTGR + S+LD +K+++YG+  PLNQVA + + E R +
Sbjct: 6   ISNMNVHMGKSIESLRKEYQKVRTGRATTSLLDDIKIDSYGTLSPLNQVATLAIPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S WD +M+A +E+ I  SNLGLNP  +G+++R+ +P  TEERR  +VK     AE++K
Sbjct: 66  TISPWDSKMIAPIEKAIMNSNLGLNPANDGKMIRLVLPPLTEERRKDIVKQLKRDAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +D LKK  K    SED +   E D+Q  T+S +  +D     K+KE+M  
Sbjct: 126 VALRNIRRDAIDQLKKLEKDKSISEDELKRAEKDVQDSTNSHVAKVDEVLLHKEKEVMEV 185


>gi|184155193|ref|YP_001843533.1| ribosome recycling factor [Lactobacillus fermentum IFO 3956]
 gi|260662307|ref|ZP_05863203.1| ribosome recycling factor [Lactobacillus fermentum 28-3-CHN]
 gi|183226537|dbj|BAG27053.1| ribosome recycling factor [Lactobacillus fermentum IFO 3956]
 gi|260553690|gb|EEX26582.1| ribosome recycling factor [Lactobacillus fermentum 28-3-CHN]
          Length = 186

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M  +   LK+ +  +R GR + S+L+ V VE YG+  PLNQ+A++T+ E R L
Sbjct: 7   LAEAKEKMAKSGDALKRTLADIRAGRANASLLNTVTVEYYGAPTPLNQLASITIPEARQL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER I+ESNLGL P  +G+ +R+ VP+ TE+RR  LVK   A  EK+K
Sbjct: 67  LISPYDKTTLKDIERAIYESNLGLTPQNDGETIRLVVPQLTEDRRKELVKDVKAEMEKAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K G  ++D    LE  +Q+ TD+ IKN++    +K+KE++ 
Sbjct: 127 VAVRNVRREAMDDLKKGNKDGDFNDDEFHDLEKQVQEETDAGIKNLEQIAADKEKELLE 185


>gi|257455346|ref|ZP_05620581.1| ribosome recycling factor [Enhydrobacter aerosaccus SK60]
 gi|257447308|gb|EEV22316.1| ribosome recycling factor [Enhydrobacter aerosaccus SK60]
          Length = 184

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 108/179 (60%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +D+M   I  L+     LRTGR  P +L  V V  YGS +PLNQVA++ V + R L+
Sbjct: 7   KQGEDKMKKAIEALENAFSKLRTGRAHPGILQGVMVSYYGSEMPLNQVASINVEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +D+ MV +V++ I ES+LGLNP+   +V+R+P+P  TEE R  + K+A   AE+ ++
Sbjct: 67  VQPFDRSMVQAVDKAIRESDLGLNPMSA-EVIRVPLPALTEETRKDMQKLARHEAEERRV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN RRD  + LK   K  + SED      +DIQK+TD  I +ID     K+ E+M  
Sbjct: 126 SVRNARRDANNALKALVKDKQISEDDERRANDDIQKMTDKYIDSIDKMLSSKEAELMAV 184


>gi|260435842|ref|ZP_05789812.1| ribosome recycling factor [Synechococcus sp. WH 8109]
 gi|260413716|gb|EEX07012.1| ribosome recycling factor [Synechococcus sp. WH 8109]
          Length = 182

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 60/179 (33%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   QDLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +D +KK  K G+ SED     ++ +QK  D  I  ++     K+ +++  
Sbjct: 124 ALRNLRRDAIDKIKKQEKEGEFSEDQSRDEQDGVQKTLDKFIAELEQHLATKEADVLKV 182


>gi|119963211|ref|YP_947274.1| ribosome recycling factor [Arthrobacter aurescens TC1]
 gi|171704626|sp|A1R4W2|RRF_ARTAT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119950070|gb|ABM08981.1| ribosome recycling factor [Arthrobacter aurescens TC1]
          Length = 185

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 104/180 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M   +   K D  ++RTGR +P++ + V VE YG+  PL Q+A+  V + R +
Sbjct: 6   LLEAGEKMDKAVEVAKDDFASIRTGRANPALYNKVIVEYYGTPTPLQQLASFGVPDARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+ + +S +G NP  +G V+R+ +PE T+ERR   VK+     E +K
Sbjct: 66  LITPYDKTALRDIEKALSDSEVGANPSNDGNVIRVTIPELTKERRKEYVKIVKGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R+IRR   D L K  K G+A ED  A  E ++  +T   + +ID   + K+ E++  
Sbjct: 126 VSIRSIRRKAKDSLDKLVKDGEAGEDEGARAEKELDALTKQHVDSIDELLKRKEAELLEV 185


>gi|147669001|ref|YP_001213819.1| ribosome recycling factor [Dehalococcoides sp. BAV1]
 gi|146269949|gb|ABQ16941.1| ribosome recycling factor [Dehalococcoides sp. BAV1]
          Length = 173

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 58/173 (33%), Positives = 110/173 (63%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++  L +++  +RTGR SP++++ ++VE  G   P+N +AN++  +PR + +  WD+
Sbjct: 1   MSASLDVLLQELSGIRTGRSSPALVEHIRVEYAGVPTPINHLANISAPDPRYITIQPWDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             ++++E+ I +S+LGL P  +G ++R+ +P  +EERR  ++K+ +   E+ KI++RN+R
Sbjct: 61  SCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKIVNKRLEEDKIAMRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD MD +KK  K+ + S+D +    + +QKITD+ I   D    +K+ E+   
Sbjct: 121 RDAMDEMKKLEKAKEISQDDLKRGSDQLQKITDNFIAKADKLGADKEAELRQV 173


>gi|298712852|emb|CBJ33372.1| ribosome recycling factor [Ectocarpus siliculosus]
          Length = 251

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + ++RM  ++  ++ ++ TLRTGR +P +LD V VE YG+  PLNQVA+V       L
Sbjct: 72  MASAQERMDKSVESVRLNLETLRTGRANPKILDRVVVECYGAETPLNQVASVKTTSATAL 131

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +D  ++A +   I E++LGL P  +G V+R+ +P  TE+RR  L K A    E+ K
Sbjct: 132 LVESYDPTILADIAAAIQEADLGLTPNNDGTVIRLNMPPVTEDRRKELAKEAKGLGEEGK 191

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+ +D +KK+ K+    +D     ++ IQK+TD T K ID     K+K+I+  
Sbjct: 192 VAIRNIRREAVDTVKKAEKAKNLGKDQSKDAQDAIQKLTDKTTKTIDEKVAAKEKDILKV 251


>gi|300114873|ref|YP_003761448.1| ribosome recycling factor [Nitrosococcus watsonii C-113]
 gi|299540810|gb|ADJ29127.1| ribosome recycling factor [Nitrosococcus watsonii C-113]
          Length = 185

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM  +++ LK+    LR  R   S+LD + V  YG++VPLNQVAN+ V + R L 
Sbjct: 7   EDASQRMDKSLTALKQTFAKLRANRAHTSLLDHITVSYYGNNVPLNQVANIAVEDARTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+++MV ++E+ I  S LGLNP+  G V+R+P+P  TEERR  +V++    AE +++
Sbjct: 67  VTPWERQMVPTIEKAIITSELGLNPVTAGTVIRVPLPVLTEERRREMVRLVRQEAEAARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD    +K+  K  + SED     E  IQKITD+ I  +D     K++++M  
Sbjct: 127 AMRNIRRDSNHTIKELIKEKEISEDDQRRAEEAIQKITDNHITQVDELLVVKEQDLMEV 185


>gi|187778975|ref|ZP_02995448.1| hypothetical protein CLOSPO_02570 [Clostridium sporogenes ATCC
           15579]
 gi|187772600|gb|EDU36402.1| hypothetical protein CLOSPO_02570 [Clostridium sporogenes ATCC
           15579]
          Length = 184

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 120/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG TI  LK+++ +++ GR +P+MLD ++ E YGS  PLNQ+ N++V E R+L
Sbjct: 6   LKKADEKMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  ++++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK +DS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKD-DVSEDDIKKAEDDIQKKTDKYIKEVDSIISVKEKEILSI 184


>gi|160934097|ref|ZP_02081484.1| hypothetical protein CLOLEP_02960 [Clostridium leptum DSM 753]
 gi|156866770|gb|EDO60142.1| hypothetical protein CLOLEP_02960 [Clostridium leptum DSM 753]
          Length = 184

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            +N   +M  TI+ L  +   +R GR +P++LD + V+ YGS   +NQ+A ++V E R L
Sbjct: 5   FENADKKMNKTINALTSEFAGIRAGRANPAVLDKIMVDYYGSPTAINQLAAISVTEARTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S WD+ +V +VE+ I  S+LG+NP  +G+V+R+  P  TE+RR  +VK      E++K
Sbjct: 65  TISPWDQSVVHAVEKAIQSSDLGINPQTDGKVIRLIFPPLTEDRRRDIVKDIKKMEEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD MD LK  +K+G+ +ED +   E  +Q  TD  IK I+S  + K+KEIM  
Sbjct: 125 VAIRSIRRDSMDKLKALKKNGEITEDDLKDAEKKMQNQTDKFIKEIESISQVKEKEIMEI 184


>gi|294788085|ref|ZP_06753329.1| ribosome recycling factor [Simonsiella muelleri ATCC 29453]
 gi|294484378|gb|EFG32061.1| ribosome recycling factor [Simonsiella muelleri ATCC 29453]
          Length = 185

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +++M  ++  L +++  +RTGR    +LD V+VE +G+ VP+ Q A++T+++ R + 
Sbjct: 7   KSTENKMQRSVEVLGENLAKVRTGRAHTGLLDQVEVEYWGNMVPVGQAASLTLIDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M + +E+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE  ++
Sbjct: 67  VKPFESNMASKIEKAIRDSNLGLNPSSVGDLIRVPMPMLTEERRKDLIKVVRGEAEDGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD  DH+KK  K  + SED     E  +QK+TD  I  ID     K++++M  
Sbjct: 127 SVRNVRRDANDHIKKLLKDKEISEDDARRGEEAVQKLTDKFIAEIDKMLASKEEDLMAI 185


>gi|229586395|ref|YP_002844896.1| ribosome recycling factor [Rickettsia africae ESF-5]
 gi|259494553|sp|C3PMJ3|RRF_RICAE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|228021445|gb|ACP53153.1| Ribosome recycling factor [Rickettsia africae ESF-5]
          Length = 186

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 85/179 (47%), Positives = 123/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRTELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM  
Sbjct: 128 SLRNIRRDGNEALKKLAKDNVIAKDEHHSLSEQVQKLTDDYSNKVDSVIKQKEQEIMTV 186


>gi|11277801|pir||T48108 hypothetical protein F16M2.40 - Arabidopsis thaliana
 gi|7523401|emb|CAB86420.1| putative protein [Arabidopsis thaliana]
          Length = 289

 Score =  226 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 65/184 (35%), Positives = 109/184 (59%), Gaps = 6/184 (3%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K +M  TI  L+    ++RTGR + +MLD ++VE YGS V L  +A ++  +   L++
Sbjct: 106 DVKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLL 165

Query: 69  SVWDKE------MVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
             +DK        + ++E+ I  S+LG+ P  +G V+R+ +P  T +RR  L KV    +
Sbjct: 166 QPYDKSRYMTNGALMAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQS 225

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E+ K+++RNIRRD +    K  K  K SED V  L +D+QK+ D  +K I+  +++K+KE
Sbjct: 226 EEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEKE 285

Query: 183 IMHF 186
           +M  
Sbjct: 286 LMKV 289


>gi|295836271|ref|ZP_06823204.1| ribosome recycling factor [Streptomyces sp. SPB74]
 gi|302522178|ref|ZP_07274520.1| ribosome recycling factor [Streptomyces sp. SPB78]
 gi|197697364|gb|EDY44297.1| ribosome recycling factor [Streptomyces sp. SPB74]
 gi|302431073|gb|EFL02889.1| ribosome recycling factor [Streptomyces sp. SPB78]
          Length = 185

 Score =  226 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 60/174 (34%), Positives = 102/174 (58%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D+  +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 12  KMEKAVVVAKEDLAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA    E +++S+R +
Sbjct: 72  KSALRNIEQAIRDSDLGVNPSNDGHIIRVVFPELTEERRKEFIKVARTKGEDARVSIRAV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   D L K  K  +  ED V   E ++   T   +  +D   + K+ E++  
Sbjct: 132 RRKAKDALDKLVKDKETGEDEVRRAEKELDDTTAKYVAQVDELLKHKESELLEV 185


>gi|294815389|ref|ZP_06774032.1| Ribosome-recycling factor [Streptomyces clavuligerus ATCC 27064]
 gi|294327988|gb|EFG09631.1| Ribosome-recycling factor [Streptomyces clavuligerus ATCC 27064]
          Length = 173

 Score =  226 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 62/173 (35%), Positives = 102/173 (58%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +DK
Sbjct: 1   MEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++E+ I +S+LG+NP  +G ++R+  PE TEERR   +KVA   AE SKIS+R++R
Sbjct: 61  TALRNIEQAIRDSDLGVNPSNDGNIIRVVFPELTEERRRDYIKVAKGKAEDSKISIRSVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           R   + + K  K G+  ED     E ++   T   +  +D   + K+ E++  
Sbjct: 121 RKAKEAIDKLVKDGEVGEDEGRRGEKELDDTTAKYVAQVDELLKHKEAELLEV 173


>gi|167032162|ref|YP_001667393.1| ribosome recycling factor [Pseudomonas putida GB-1]
 gi|189044066|sp|B0KSA2|RRF_PSEPG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166858650|gb|ABY97057.1| ribosome recycling factor [Pseudomonas putida GB-1]
          Length = 185

 Score =  226 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  L +++  +RTGR  PS+LD VKV A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMTKSLEALGRNLAAIRTGRAHPSILDTVKVTAWGSEMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A   AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQASGVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD +  LKK  K  + SED      ++IQK+TD  +  +D+ F+ K+K++M  
Sbjct: 127 AVRNVRRDALADLKKLTKDKEISEDEERRAADEIQKLTDKFVAEVDAAFKAKEKDLMAV 185


>gi|310779561|ref|YP_003967894.1| ribosome recycling factor [Ilyobacter polytropus DSM 2926]
 gi|309748884|gb|ADO83546.1| ribosome recycling factor [Ilyobacter polytropus DSM 2926]
          Length = 186

 Score =  226 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 81/183 (44%), Positives = 120/183 (65%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    + + +++M   I   K    ++R GR + SMLD +KVE YGS +PLNQVANV+ 
Sbjct: 1   MSAQEIMNDCREKMDKAIESTKHKFASIRAGRANVSMLDGIKVEQYGSEMPLNQVANVSA 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+  WDK ++  +E+ I  SNLGL P  +G+V+R+ +PE T ERR   VK+A  
Sbjct: 61  PEARLLVIDPWDKSIIQKIEKTIMLSNLGLTPNNDGKVIRLQIPELTAERRKEYVKLAKT 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  KI++RNIR+D  +HL++  K G  ++D + S E+D QKITD+ IK +D   ++K+
Sbjct: 121 EAENGKIAIRNIRKDANNHLRRLEKDGDITQDELKSFEDDTQKITDNHIKLVDELLKKKE 180

Query: 181 KEI 183
           KEI
Sbjct: 181 KEI 183


>gi|325135114|gb|EGC57741.1| ribosome recycling factor [Neisseria meningitidis M13399]
 gi|325137020|gb|EGC59616.1| ribosome recycling factor [Neisseria meningitidis M0579]
          Length = 185

 Score =  226 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTTKEEDLMAI 185


>gi|326791507|ref|YP_004309328.1| ribosome recycling factor [Clostridium lentocellum DSM 5427]
 gi|326542271|gb|ADZ84130.1| ribosome recycling factor [Clostridium lentocellum DSM 5427]
          Length = 184

 Score =  226 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 68/181 (37%), Positives = 114/181 (62%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L   +++M  ++     ++ T+R GR +P +LD + V+ YG   P+ QV N+TV E R+
Sbjct: 4   ELNKCQEKMNKSLGAFADELATIRAGRANPHVLDRLTVDYYGVATPVQQVGNITVPEARV 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L +  W+  ++ ++E+ I+ES+LG+NP  +G+V+R+  PE TEERR  L K      E S
Sbjct: 64  LQIQPWEGTLLKAIEKAINESDLGINPTNDGKVIRLVFPELTEERRKDLTKDIKKKGENS 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           KI++RNIRRD ++  KK  K+ + ++D V   E ++QK+TD  +  ID+  ++K KEI+ 
Sbjct: 124 KIAIRNIRRDALETFKKMEKANEMTKDEVEVAEKEVQKLTDKFVGEIDALVDKKSKEILS 183

Query: 186 F 186
            
Sbjct: 184 V 184


>gi|213691943|ref|YP_002322529.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|254809493|sp|B7GQS1|RRF_BIFLI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|213523404|gb|ACJ52151.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320458050|dbj|BAJ68671.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 183

 Score =  226 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   +++M  T+   K++   +RTGR +P++L+ + V+ YG+  P+  VA++ V EPR L
Sbjct: 4   IDQAREQMAKTVENTKENFSGIRTGRANPALLNGITVDYYGAPTPIKAVASIGVPEPRTL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ +  S+LG++P  +G V+R+ +PE TEERR   VK+A   AE  K
Sbjct: 64  SVTPFDASQAGAVEKALRNSDLGVSPNRDGNVIRLTMPELTEERRKEYVKLAKGKAEDGK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + L K+ K G+  ED    L  D+ K+T S    ID+  E K+KEIM  
Sbjct: 124 VAVRNIRRKTKEALDKAVKDGEMGEDEGDRLLKDLDKVTKSVTDEIDALLESKQKEIMEV 183


>gi|146318980|ref|YP_001198692.1| ribosome recycling factor [Streptococcus suis 05ZYH33]
 gi|146321189|ref|YP_001200900.1| ribosome recycling factor [Streptococcus suis 98HAH33]
 gi|253752048|ref|YP_003025189.1| ribosome recycling factor [Streptococcus suis SC84]
 gi|253753873|ref|YP_003027014.1| ribosome recycling factor [Streptococcus suis P1/7]
 gi|253755251|ref|YP_003028391.1| ribosome recycling factor [Streptococcus suis BM407]
 gi|302024058|ref|ZP_07249269.1| ribosome recycling factor [Streptococcus suis 05HAS68]
 gi|330832480|ref|YP_004401305.1| ribosome recycling factor [Streptococcus suis ST3]
 gi|166231519|sp|A4W2B1|RRF_STRS2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166231521|sp|A4VW03|RRF_STRSY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145689786|gb|ABP90292.1| Ribosome recycling factor [Streptococcus suis 05ZYH33]
 gi|145691995|gb|ABP92500.1| Ribosome recycling factor [Streptococcus suis 98HAH33]
 gi|251816337|emb|CAZ51968.1| ribosome recycling factor [Streptococcus suis SC84]
 gi|251817715|emb|CAZ55464.1| ribosome recycling factor [Streptococcus suis BM407]
 gi|251820119|emb|CAR46427.1| ribosome recycling factor [Streptococcus suis P1/7]
 gi|319758416|gb|ADV70358.1| ribosome recycling factor [Streptococcus suis JS14]
 gi|329306703|gb|AEB81119.1| ribosome recycling factor [Streptococcus suis ST3]
          Length = 185

 Score =  226 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 119/186 (63%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ I +   ++RM  +   L ++   +R GR + S+LD + VE YGS  PLNQ+A +TV
Sbjct: 1   MSKEI-IAKAQERMNQSHQSLAREFSHIRAGRANASLLDRISVEYYGSPTPLNQLAGITV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+++ +DK ++  +ER ++ S+LGL P  +G V+R+ +P  TEE R  L K    
Sbjct: 60  PEARVLLITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E SK+++RNIRRD MD  KK+ K+ + +ED + +LE DIQK+TD  IK ID    +K+
Sbjct: 120 VGENSKVAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKDIQKVTDDAIKTIDKMTADKE 179

Query: 181 KEIMHF 186
           KE++  
Sbjct: 180 KELLEV 185


>gi|257869600|ref|ZP_05649253.1| ribosome recycling factor [Enterococcus gallinarum EG2]
 gi|257803764|gb|EEV32586.1| ribosome recycling factor [Enterococcus gallinarum EG2]
          Length = 185

 Score =  226 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KD+M      L++++  +R GR + S+LD V V  YG   PLNQ+A++T+ E R+L
Sbjct: 6   LTEAKDKMKKAAENLQRELGQIRAGRANASILDRVMVTYYGVPTPLNQMASITIPEARIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK M+  VE+ I +S++G+ P  +G V+R+ +P+ TEERR  L K     AE +K
Sbjct: 66  MITPFDKTMIQEVEKAIMQSDIGITPANDGTVIRLVIPQLTEERRKELAKDVKKEAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD MD  KK  KSG  + D +   E ++Q +TD++IK ID    EK++E++  
Sbjct: 126 IAVRNIRRDAMDAYKKQEKSGDITVDDLRESEKEVQTLTDNSIKEIDQIAAEKEQELLEV 185


>gi|190360295|sp|A8F0R2|RRF_RICM5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 186

 Score =  226 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 85/179 (47%), Positives = 122/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++ +M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQGKMEKALKVLDHELKGLRTGRASINLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPTLTEERRQELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM  
Sbjct: 128 SLRNIRRDGNEELKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIMTV 186


>gi|317508973|ref|ZP_07966606.1| ribosome recycling protein [Segniliparus rugosus ATCC BAA-974]
 gi|316252738|gb|EFV12175.1| ribosome recycling protein [Segniliparus rugosus ATCC BAA-974]
          Length = 185

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM   +   K +   +RTGR + S+   V V+ YG+  P+ QV++V   +PR++
Sbjct: 6   LFEAEERMELAVEVAKDEFAAIRTGRATASLFAKVVVDYYGTPTPIPQVSSVQTPDPRLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I +S+LGLNP  +GQV+R+ +P  TEERR    K A   AE+++
Sbjct: 66  VIKPYEASQLRAIEEAIQKSDLGLNPSNDGQVVRVAIPALTEERRKEFAKQARGKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RR   D L K  K G+A ED V   E ++ K+T   +  ID   ++K+ E++  
Sbjct: 126 VTVRNVRRKANDQLGKLAKEGQAGEDDVVRAEKELDKLTAKFVGTIDELVKKKEAELLEV 185


>gi|224540949|ref|ZP_03681488.1| hypothetical protein CATMIT_00100 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526100|gb|EEF95205.1| hypothetical protein CATMIT_00100 [Catenibacterium mitsuokai DSM
           15897]
          Length = 181

 Score =  226 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 119/180 (66%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K++M  ++     +++ +RTGR +PSMLD V VE YGS  PLNQVA ++V+E R L
Sbjct: 6   LEEAKEKMEKSVEAFSNELVNIRTGRANPSMLDRVMVEYYGSPTPLNQVAGISVVEGRQL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK  +  +E GI++++LGL P  +G V+RI +P  TEERR  +VK  +  AE++K
Sbjct: 66  VIKPYDKNSMKDIEHGIYQADLGLTPQNDGTVIRIVIPPLTEERRKEMVKQVNKLAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+    +    K+G+ +ED V + + D+Q +T+  +K ID   +EK+K++M  
Sbjct: 126 VALRNIRRNANTDV---EKTGE-TEDEVKAGKEDVQDLTNEFVKKIDQIAKEKEKDLMTV 181


>gi|227872428|ref|ZP_03990772.1| ribosome recycling factor [Oribacterium sinus F0268]
 gi|227841725|gb|EEJ52011.1| ribosome recycling factor [Oribacterium sinus F0268]
          Length = 184

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/175 (42%), Positives = 109/175 (62%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M  T   L  ++ T+R GR +P +LD + V+ YG+  P+ QV NV+V E R+L +  W
Sbjct: 10  EKMHKTHDNLMSELGTIRAGRANPHVLDRIMVDYYGTPTPIQQVGNVSVPEARILQIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I+ S LG+NP  +GQV+R+  PE TEERR  L K      E +KI++RN
Sbjct: 70  DKSVMKEIEKAINMSELGINPTNDGQVIRLVFPELTEERRKELTKDVKKKGEAAKIAIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IRRD MD  KK  K+ + +ED ++    DIQ++TD  I+ ID   E K KE+M  
Sbjct: 130 IRRDAMDLAKKLEKNAEITEDDLSRQTKDIQELTDHMIEKIDKSVEAKNKELMTV 184


>gi|190360294|sp|A9M3S1|RRF_NEIM0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|325131044|gb|EGC53769.1| ribosome recycling factor [Neisseria meningitidis OX99.30304]
          Length = 185

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M   VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFEGNMAVKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLMAI 185


>gi|48474737|sp|Q8VS52|RRF_LACRE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|18139798|gb|AAL60144.1|AF401482_3 ribosome recycling factor [Lactobacillus reuteri]
          Length = 186

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 75/178 (42%), Positives = 118/178 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KD+M  +   L++ +  +R GR + S+L+ VKV+ YG+  PLNQVA++T+ E R L
Sbjct: 8   LNEAKDKMAKSGDALRRTLADIRAGRANASLLNGVKVDYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D+  + ++E+ I+ +NLGL P  +G  +RI +P+ TEERR  LVK   A  EK+K
Sbjct: 68  LVTPYDESSLDNIEKAIYAANLGLTPQNDGSAIRILIPQLTEERRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RR+ MD LKK  K G  ++D    LE  +Q  TD+ IKN+++   +K+KE+M
Sbjct: 128 VAVRNVRREAMDDLKKGNKDGDFNDDEFHDLEKKVQTETDNGIKNLENIAADKEKELM 185


>gi|256419436|ref|YP_003120089.1| ribosome recycling factor [Chitinophaga pinensis DSM 2588]
 gi|256034344|gb|ACU57888.1| ribosome recycling factor [Chitinophaga pinensis DSM 2588]
          Length = 187

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 111/178 (62%), Gaps = 1/178 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++    M   I  L+ ++  +R G+ +P +LD + V+ YGS  PL QVAN+TV + R L
Sbjct: 9   IEDATATMRKAIGHLESELTKIRAGKANPQILDGITVDYYGSPTPLAQVANITVADARTL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  W+K M+  +ER I  SN+G+NP  +G ++R+ +P  TEERR   VK A    E++K
Sbjct: 69  TVQPWEKNMLQPIERAIIASNIGINPQNDGIIIRMFLPPLTEERRKEFVKRALNEGEQAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++RNIRRD ++ +KK +K G  SED     E D+Q +T+  I+ +D    +K+KEIM
Sbjct: 129 IAIRNIRRDAIEGIKKLQKDG-LSEDTAKDAEADVQNLTNKYIELVDKHTAQKEKEIM 185


>gi|113477237|ref|YP_723298.1| ribosome recycling factor [Trichodesmium erythraeum IMS101]
 gi|123160353|sp|Q10Y49|RRF_TRIEI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110168285|gb|ABG52825.1| ribosome recycling factor [Trichodesmium erythraeum IMS101]
          Length = 182

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/178 (35%), Positives = 104/178 (58%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ++L+  +++M   I   K    T+RTGR + S+LD V VE YGS   L  +AN+ + +  
Sbjct: 1   MNLKEAEEKMQKAIEATKNSFNTVRTGRANASLLDRVMVEYYGSPTQLKSMANIGIPDAS 60

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            + +  +DK  +  +E+ I+ S++GL P  +G ++R+ +P  T ERR  +VK     AE+
Sbjct: 61  TITIQPYDKTSLGLIEKAINMSDVGLTPNNDGSIIRLNIPALTAERRQEMVKKTAKLAEE 120

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K+S+RNIRRD +D ++K  K+   S+D    L++ +QK TD  I  ID     K+K+
Sbjct: 121 GKVSIRNIRRDAVDSIRKQEKNSDISKDESRDLQDKVQKKTDKYIAKIDELLAAKEKD 178


>gi|148380389|ref|YP_001254930.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 3502]
 gi|153933414|ref|YP_001384607.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 19397]
 gi|153934708|ref|YP_001388123.1| ribosome recycling factor [Clostridium botulinum A str. Hall]
 gi|166230778|sp|A7FPZ5|RRF_CLOB1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230779|sp|A5I4K9|RRF_CLOBH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|148289873|emb|CAL83981.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 3502]
 gi|152929458|gb|ABS34958.1| ribosome recycling factor [Clostridium botulinum A str. ATCC 19397]
 gi|152930622|gb|ABS36121.1| ribosome recycling factor [Clostridium botulinum A str. Hall]
          Length = 184

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 120/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG TI  LKK++ +++ GR +P+MLD ++ E YGS  PLNQ+ N++V E R+L
Sbjct: 6   LKKADEKMGKTIVALKKELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  ++++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKGALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK IDS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKD-DVSEDDIKKAEDDIQKKTDKYIKEIDSIISAKEKEILSI 184


>gi|311694060|gb|ADP96933.1| ribosome recycling factor [marine bacterium HP15]
          Length = 185

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/170 (40%), Positives = 101/170 (59%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
           ++  L      +RTGR  PS+LD V V  YG   PL QVA+V V + R L VS W+K ++
Sbjct: 16  SLESLNSAFNKIRTGRAHPSILDSVMVNYYGQETPLKQVASVNVEDNRTLTVSPWEKNLM 75

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
            ++E+ I  S+LGLNP   G ++RIP+P  TEE R  +VK A A AE  ++S+RN RRD 
Sbjct: 76  PTIEKAIMASDLGLNPATSGDIIRIPMPMLTEETRKEMVKQAKADAEHGRVSIRNARRDA 135

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
              +K   K  + +ED     E+DIQK+TD  I  ++   + K++++M  
Sbjct: 136 NSMIKDLLKEKEITEDDERKGEDDIQKLTDRYIAEVEKMLKAKEEDLMAV 185


>gi|62263467|gb|AAX78163.1| unknown protein [synthetic construct]
          Length = 220

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 71/188 (37%), Positives = 114/188 (60%), Gaps = 2/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M ++I+  L++ ++RM  ++  L  D+  +RTGR  P +L  V ++ YG   P+ Q AN+
Sbjct: 24  MLEMINDILKDAENRMKKSLEVLADDLAKIRTGRAQPDLLAHVTIDYYGVETPITQAANI 83

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           TVL+ R L ++ W+K + + +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+ 
Sbjct: 84  TVLDARTLGITPWEKGLSSKIEKAILTSDLGLNPTNLGDSLRVPMPALNEERRKELVKLV 143

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            +  E  ++S+RNIRRD    +K+  K  + +ED     E+DIQKITD  I   D+   +
Sbjct: 144 KSETEAGRVSIRNIRRDANGDIKELLKEKEITEDQAKKAEDDIQKITDKMIAQADALAAK 203

Query: 179 KKKEIMHF 186
           K++++M  
Sbjct: 204 KEQDLMAV 211


>gi|328675398|gb|AEB28073.1| Ribosome recycling factor [Francisella cf. novicida 3523]
          Length = 185

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 70/186 (37%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++  L++ ++RM  ++  L  D+  +RTGR  P +L  V ++ YG   P++Q AN+TV
Sbjct: 2   INEI--LKDAENRMKKSLEVLADDLAKIRTGRAHPDLLAHVTIDYYGVETPISQAANITV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+ R L ++ W+K + + +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+  +
Sbjct: 60  LDARTLGITPWEKGLSSKIEKAILTSDLGLNPTNLGDSLRVPMPALNEERRKELVKLVKS 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  ++S+RNIRRD    +K+  K  + +ED     E+DIQKITD  I   D+   +K+
Sbjct: 120 ETEAGRVSIRNIRRDANGDIKELLKEKEITEDQAKKAEDDIQKITDKMIAQADALAAKKE 179

Query: 181 KEIMHF 186
           +++M  
Sbjct: 180 QDLMAV 185


>gi|93006537|ref|YP_580974.1| ribosome recycling factor [Psychrobacter cryohalolentis K5]
 gi|122415111|sp|Q1QA13|RRF_PSYCK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|92394215|gb|ABE75490.1| ribosome recycling factor [Psychrobacter cryohalolentis K5]
          Length = 184

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 112/179 (62%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  T+  L+     +RTGR  P ML  V V  YGS  PLNQVA+V V + R L+
Sbjct: 7   QDGEARMQKTLEALESTFSKVRTGRAHPGMLTGVMVSYYGSPTPLNQVASVNVEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +D+ MV ++++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE S++
Sbjct: 67  VQPFDRTMVQAIDKAIREADLGLNPMTA-DVIRVPMPALTEETRKDMQKLARGEAENSRV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD M+ +K+  K  + SED      +DIQKITD  I+ IDS   +K+ ++M  
Sbjct: 126 SIRNIRRDMMNDIKELAKEKEISEDDERRASDDIQKITDKYIETIDSRLSKKETDLMAV 184


>gi|227488622|ref|ZP_03918938.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227543226|ref|ZP_03973275.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227091516|gb|EEI26828.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181035|gb|EEI62007.1| ribosome recycling factor [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 185

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +    +RM  T+   ++++  +RTGR +PSM + V  E YG   P+NQ+A ++V EPRML
Sbjct: 6   ILEADERMEATVDHTREELSHIRTGRANPSMFNGVIAEFYGQPTPINQMATISVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +  +ER I  S+LG+NP  +GQVLR+ VP+ TEERR  +VKVA +  E+ K
Sbjct: 66  LIKPYDMNSMDDIERAIRNSDLGVNPTNDGQVLRVTVPQLTEERRREMVKVAKSKGEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR GMD LKK +K G A ED V + E ++ K+T      ++   E K+K++M  
Sbjct: 126 IAIRNIRRKGMDQLKKIQKDGDAGEDEVQAGEKELDKVTKKNETRVEELVEAKEKDLMEV 185


>gi|223933844|ref|ZP_03625811.1| ribosome recycling factor [Streptococcus suis 89/1591]
 gi|223897495|gb|EEF63889.1| ribosome recycling factor [Streptococcus suis 89/1591]
          Length = 185

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 77/186 (41%), Positives = 119/186 (63%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ I +   +DRM  +   L ++   +R GR + S+LD + VE YGS  PLNQ+A +TV
Sbjct: 1   MSKEI-IAKAQDRMNQSHQSLAREFSHIRAGRANASLLDRISVEYYGSPTPLNQLAGITV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+++ +DK ++  +ER ++ S+LGL P  +G V+R+ +P  TEE R  L K    
Sbjct: 60  PEARVLLITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E SK+++RNIRRD MD  KK+ K+ + +ED + +LE DIQK+TD  IK ID    +K+
Sbjct: 120 VGENSKVAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKDIQKVTDDAIKTIDKMTADKE 179

Query: 181 KEIMHF 186
           KE++  
Sbjct: 180 KELLEV 185


>gi|159036877|ref|YP_001536130.1| ribosome recycling factor [Salinispora arenicola CNS-205]
 gi|189044070|sp|A8M6B4|RRF_SALAI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157915712|gb|ABV97139.1| ribosome recycling factor [Salinispora arenicola CNS-205]
          Length = 185

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K++   +RTGR + +M   + ++ YGS  PL Q+A++ V EPRM+
Sbjct: 6   LLEAEEKMERAIEHAKEEFGAIRTGRANAAMFSKIIIDYYGSPTPLPQMASIGVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D     ++E+ I +S+LG+NP  EG  LRI +P+ TEERR  ++KVA    E++K
Sbjct: 66  IIKPYDNSQTNAMEKAIRDSDLGVNPNNEGNQLRILLPQMTEERRREMIKVARHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + L +  K+G+  ED     E ++  +T   +  +D   + K+ E++  
Sbjct: 126 VAVRNIRRKAKEELDRLVKAGEVGEDEGRRAEKELDDLTQRFVGVVDELIKHKEAELLEV 185


>gi|189425767|ref|YP_001952944.1| ribosome recycling factor [Geobacter lovleyi SZ]
 gi|238692131|sp|B3E719|RRF_GEOLS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189422026|gb|ACD96424.1| ribosome recycling factor [Geobacter lovleyi SZ]
          Length = 185

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +K  M  ++  L+K+   +RTGR S S+LD VKV+ YG+   L+QVA + V EPR +
Sbjct: 6   ITEMKAHMEKSVEDLRKEYQRIRTGRASTSLLDEVKVDYYGNPSSLSQVATLAVPEPRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+ +M+  +E+ I  +NLGL P  +G+++R+ +P  TEERR  +VK      E  K
Sbjct: 66  TITPWESKMIGPIEKAILNANLGLTPGNDGKLIRLNLPPLTEERRKEIVKGMKKMDEDHK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR  +D LKK  K    +ED +   E ++Q +TDS I  +D     K+KE+M  
Sbjct: 126 VAVRNIRRKAIDDLKKMEKDKSITEDELKKAEKEVQTVTDSIIAKLDEILAHKEKEVMEV 185


>gi|220912157|ref|YP_002487466.1| ribosome recycling factor [Arthrobacter chlorophenolicus A6]
 gi|254809488|sp|B8HFN8|RRF_ARTCA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219859035|gb|ACL39377.1| ribosome recycling factor [Arthrobacter chlorophenolicus A6]
          Length = 185

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 59/180 (32%), Positives = 104/180 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D  ++RTGR +P + + V V+ YGS  PL Q+A+  + + R +
Sbjct: 6   LLEAEEKMDKAVEVAKEDFASIRTGRANPGLYNRVLVDYYGSPTPLQQLASFAIPDARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +ER + +S +G NP  +G V+RI +PE T+ERR   VK+     E +K
Sbjct: 66  LITPFDKTALRDIERALSDSEVGANPSNDGNVIRITIPELTKERRKEYVKIVKTKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR   + L +  K G+A ED     E ++  +T + +  ID   + K+ E++  
Sbjct: 126 VSIRNIRRKAKEALDRLVKDGEAGEDEGTRAEKELDGLTKAHVDGIDELLKRKEAELLEV 185


>gi|120555456|ref|YP_959807.1| ribosome recycling factor [Marinobacter aquaeolei VT8]
 gi|120325305|gb|ABM19620.1| ribosome recycling factor [Marinobacter aquaeolei VT8]
 gi|302608192|emb|CBW44445.1| ribosome recycling factor [Marinobacter hydrocarbonoclasticus]
          Length = 196

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 67/170 (39%), Positives = 102/170 (60%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
           ++  L      +RTGR  P++LD V V  YG   PL QVA+V V + R L V+ W+K +V
Sbjct: 27  SLEALHSAFNKIRTGRAHPAILDSVMVNYYGQETPLKQVASVNVEDNRTLTVAPWEKNLV 86

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
            ++E+ I  S+LGLNP   G ++R+P+P  TEE R  +VK A A AE  ++S+RN RRD 
Sbjct: 87  PTIEKAIMTSDLGLNPATSGDIIRVPMPMLTEETRKEMVKQAKADAEHGRVSIRNARRDA 146

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
              +K+  K  + SED     E++IQK+TD  I  ++   + K++++M  
Sbjct: 147 NHMIKELVKEKEISEDDQHRGEDEIQKLTDKYIAEVEKMLKSKEEDLMAV 196


>gi|315121993|ref|YP_004062482.1| ribosome recycling factor [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495395|gb|ADR51994.1| ribosome recycling factor [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 186

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 157/186 (84%), Positives = 171/186 (91%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MNQ IDL++IKDRM D ISFLKKDMMTLRTGRVS SMLDLVKV++YGS VPLNQVANVTV
Sbjct: 1   MNQAIDLKSIKDRMNDAISFLKKDMMTLRTGRVSTSMLDLVKVDSYGSRVPLNQVANVTV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L+PR L VSVWD  MV+SVERGIH+SNLG NPIVEGQVLRIPVPETTEERRLALVKVAH 
Sbjct: 61  LDPRTLAVSVWDSSMVSSVERGIHDSNLGFNPIVEGQVLRIPVPETTEERRLALVKVAHN 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAEKSKISVRNIRRDGMD+LKKS+KSGK SED+  SLEND+QK+TD+TIK+IDSFFEEKK
Sbjct: 121 YAEKSKISVRNIRRDGMDYLKKSKKSGKISEDIAESLENDVQKMTDATIKDIDSFFEEKK 180

Query: 181 KEIMHF 186
           KEIM F
Sbjct: 181 KEIMRF 186


>gi|332296167|ref|YP_004438090.1| Ribosome-recycling factor [Thermodesulfobium narugense DSM 14796]
 gi|332179270|gb|AEE14959.1| Ribosome-recycling factor [Thermodesulfobium narugense DSM 14796]
          Length = 185

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 126/180 (70%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           ++++++ RM   +  L K+  ++RTGR SP++LD VKV+ YG+ VP+ Q+ANV+  + R 
Sbjct: 5   EIEHLRQRMSKAVDNLSKEFASVRTGRASPALLDHVKVDYYGTTVPIKQLANVSQQDART 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L+++V+DK  + +V++ I  S+LGL P V+G VLRI +P  T+ERR  LVKV    AE++
Sbjct: 65  LLINVYDKNALQAVDKAIRLSDLGLTPQVDGMVLRIVIPTLTQERRKELVKVVKKMAEEA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++VRNIRRD ++ L+K  K+ + SED +   +N+ QKITDS I+ ID     K+KEI++
Sbjct: 125 RVAVRNIRRDELEILEKRAKNKEISEDDLKRFKNEFQKITDSYIQEIDKLLSNKEKEILN 184


>gi|307722053|ref|YP_003893193.1| ribosome recycling factor [Sulfurimonas autotrophica DSM 16294]
 gi|306980146|gb|ADN10181.1| ribosome recycling factor [Sulfurimonas autotrophica DSM 16294]
          Length = 185

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/186 (33%), Positives = 115/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ +    + +M  +I  +++D  TLRTG+V+ S+LD VK++ YG+  PL+QV +V  
Sbjct: 2   LNEIFN--ECETKMQGSIEHMQRDFKTLRTGKVTTSVLDNVKIDYYGTPTPLDQVGSVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   +V++ W+K ++  +E  I+ +N+G+NP  +G ++++  P  T E+R   VK    
Sbjct: 60  ADATTIVINPWEKNLLPDIESAINAANIGVNPNNDGDLIKLFFPPMTVEQRQESVKKMKT 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RN RRD  D +KK  K  + ++D   S ++++QKITD  I  +DS  ++K+
Sbjct: 120 MGENAKVSIRNDRRDANDKIKKLEKDKEITQDESKSAQDNVQKITDKYITKVDSILKDKE 179

Query: 181 KEIMHF 186
            EI+  
Sbjct: 180 AEILKV 185


>gi|153940196|ref|YP_001391730.1| ribosome recycling factor [Clostridium botulinum F str. Langeland]
 gi|166230780|sp|A7GG20|RRF_CLOBL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|152936092|gb|ABS41590.1| ribosome recycling factor [Clostridium botulinum F str. Langeland]
 gi|295319756|gb|ADG00134.1| ribosome recycling factor [Clostridium botulinum F str. 230613]
          Length = 184

 Score =  226 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 120/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG TI  LK+++ +++ GR +P+MLD ++ E YGS  PLNQ+ N+++ E R+L
Sbjct: 6   LKKADEKMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  ++++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK IDS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKD-DVSEDDIKKAEDDIQKKTDKYIKEIDSIISAKEKEILSI 184


>gi|217967587|ref|YP_002353093.1| ribosome recycling factor [Dictyoglomus turgidum DSM 6724]
 gi|217336686|gb|ACK42479.1| ribosome recycling factor [Dictyoglomus turgidum DSM 6724]
          Length = 185

 Score =  226 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            + I+++M   +  +KK+   +RTG+ S  + D +KV  YG+ +PLNQVA + V E R +
Sbjct: 6   FKEIEEKMKKAVEVVKKEFQNIRTGKPSVGIFDEIKVSYYGNMMPLNQVATLKVAEGRTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK ++  +E+ I +S LGL P  +GQV+R+  P  TEERR  LVK+ H  AE  +
Sbjct: 66  LIQPWDKSIIGEIEKAILKSELGLTPQNDGQVIRVVFPPLTEERRKELVKIVHKEAETGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD ++  KK ++ GK SED    L+ ++QKITD  I+ I+   E K+KEIM  
Sbjct: 126 VAIRNIRRDYLEIFKKEKQEGKISEDEFYRLQEELQKITDKFIEEIEKLIEMKEKEIMEV 185


>gi|57234843|ref|YP_181120.1| ribosome recycling factor [Dehalococcoides ethenogenes 195]
 gi|123618956|sp|Q3Z9H9|RRF_DEHE1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|57225291|gb|AAW40348.1| ribosome recycling factor [Dehalococcoides ethenogenes 195]
          Length = 185

 Score =  226 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/186 (33%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++  LQ  + +M  ++  L +++  +RTGR SP++++ +KVE  G   P+N +A++  
Sbjct: 2   INEI--LQKSEKKMAASLDVLSQELSGIRTGRSSPALVEHIKVEYAGVPTPINHLASIAA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +PR + +  WD+  ++++E+ I +S+LGL P  +G ++R+ +P  +EERR  ++K+   
Sbjct: 60  PDPRYITIQPWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVSK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+ KI++RN+RRD MD +KK  KS + S+D +    + +QKITDS I   D    +K+
Sbjct: 120 RLEEDKIAMRNVRRDAMDEMKKLEKSKEISQDDLKRGSDQLQKITDSFIAKADKLGADKE 179

Query: 181 KEIMHF 186
            E+   
Sbjct: 180 TELKQV 185


>gi|325474924|gb|EGC78110.1| ribosome-recycling factor [Treponema denticola F0402]
          Length = 185

 Score =  226 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 77/178 (43%), Positives = 120/178 (67%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N +++M  T++ LK++   LRTGR S ++ D ++V  YG   PLNQ+AN+++ E R++V
Sbjct: 7   KNCEEKMKKTVAALKEEFNMLRTGRASSALFDKIRVNCYGESTPLNQLANISIPEARLVV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK ++  +E+ + +++L +NP  +G+V+RI +P  TE+RR  L K A   AE S++
Sbjct: 67  IQPWDKGLLVEIEKAVLQADLSVNPTNDGKVIRIAIPPLTEDRRKDLAKKAKTIAENSRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           SVRNIRRDG+D  KK +K GK SED + + E+  QK TD+ I  I+   E K+KEIM 
Sbjct: 127 SVRNIRRDGIDEAKKLQKDGKISEDQLKTAEDAFQKSTDAYIAEINKVLEAKEKEIME 184


>gi|94263226|ref|ZP_01287043.1| Ribosome recycling factor [delta proteobacterium MLMS-1]
 gi|93456444|gb|EAT06564.1| Ribosome recycling factor [delta proteobacterium MLMS-1]
          Length = 184

 Score =  226 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 73/186 (39%), Positives = 123/186 (66%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++VI    + ++M  ++   ++++  +RTGR S ++LD +KVEAYGS +PLNQVA +T+
Sbjct: 1   MDEVI--LEMSEKMEQSLEAYRRELSRIRTGRASLNILDGIKVEAYGSQLPLNQVATLTI 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RM+V+  WD +   ++E+ I  S++GL P  +G+V+R+ +P+ TEERR  LVK    
Sbjct: 59  PESRMIVIQPWDAQQGKAIEKAIQASDIGLTPSSDGKVIRLTIPQLTEERRKDLVKQLKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E+ +++VRN+RR+ +D LKK +   +  ED    L+++ QK TD+ I  ID+   +K+
Sbjct: 119 LSEEYRVAVRNVRREAIDRLKKLKNDKQLPEDDFFRLQDEAQKETDAAIAKIDTIMADKE 178

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 179 KELMEV 184


>gi|116629461|ref|YP_814633.1| ribosome recycling factor [Lactobacillus gasseri ATCC 33323]
 gi|238852611|ref|ZP_04643021.1| ribosome recycling factor [Lactobacillus gasseri 202-4]
 gi|311110891|ref|ZP_07712288.1| ribosome recycling factor [Lactobacillus gasseri MV-22]
 gi|122273601|sp|Q044C7|RRF_LACGA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116095043|gb|ABJ60195.1| ribosome recycling factor [Lactobacillus gasseri ATCC 33323]
 gi|238834757|gb|EEQ26984.1| ribosome recycling factor [Lactobacillus gasseri 202-4]
 gi|311066045|gb|EFQ46385.1| ribosome recycling factor [Lactobacillus gasseri MV-22]
          Length = 185

 Score =  226 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/182 (40%), Positives = 115/182 (63%), Gaps = 2/182 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+VI  +  KD M  +I+  +K++  +R G  + S+L+ +KV+ YG   PL Q+++V++ 
Sbjct: 3   NEVI--EKAKDNMKKSIAVFQKELGGIRAGVANASLLEGIKVDYYGVPTPLTQMSSVSIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+V+ +DK  +  +E  I  S+LG+ P  +G V+RI +P+ T ERR  + K     
Sbjct: 61  EARVLMVTPYDKSSLDDIEHAILASDLGITPANDGTVIRIVIPQLTGERRQEIAKQVGKL 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AEK KI+VRN+RRD MD LK+  K+G  +ED   SLE  +QK+TD   K ID   ++K +
Sbjct: 121 AEKGKIAVRNVRRDAMDTLKRQEKNGDITEDEQRSLEKQVQKVTDDATKEIDKLADQKSQ 180

Query: 182 EI 183
           EI
Sbjct: 181 EI 182


>gi|163839290|ref|YP_001623695.1| ribosome recycling factor [Renibacterium salmoninarum ATCC 33209]
 gi|189044067|sp|A9WL12|RRF_RENSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|162952766|gb|ABY22281.1| ribosome recycling factor [Renibacterium salmoninarum ATCC 33209]
          Length = 185

 Score =  226 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 103/180 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR +P +   V V+ YG+  PL Q+A+  V E R L
Sbjct: 6   LLEAEEKMDKAVEVAKEDFSAVRTGRANPGLFAKVMVDYYGAPTPLQQLASFAVPEARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E+ +  S +G NP  +G V+R+ +PE T+ERR   VK+    +E +K
Sbjct: 66  LITPFDRSALGDIEKALSNSEVGANPSNDGNVIRVVMPELTQERRREYVKIVRGKSEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RNIRR   + L K  K G A ED  +  E ++  +T +  +NID   + K+ E++  
Sbjct: 126 ISIRNIRRKAKESLDKIVKDGDAGEDEGSRAEKELDGLTKTHTENIDELLKRKEAELLEV 185


>gi|170760155|ref|YP_001787743.1| ribosome recycling factor [Clostridium botulinum A3 str. Loch
           Maree]
 gi|238688518|sp|B1KWM1|RRF_CLOBM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169407144|gb|ACA55555.1| ribosome recycling factor [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 184

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 119/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   ++MG +I  LK+++ +++ GR +P+MLD +  E YGS  PLNQ+AN++V E R+L
Sbjct: 6   LKKADEKMGKSIVALKRELASMKAGRANPAMLDRIDAEYYGSMTPLNQLANISVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  + ++E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKSSMGAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEETK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K    SED +   E+DIQK TD  IK IDS    K+KEI+  
Sbjct: 126 VAIRSIRRDCNDDVKNLKKD-DVSEDDIKKTEDDIQKKTDKYIKEIDSIISAKEKEILSI 184


>gi|300361909|ref|ZP_07058086.1| ribosome recycling factor [Lactobacillus gasseri JV-V03]
 gi|300354528|gb|EFJ70399.1| ribosome recycling factor [Lactobacillus gasseri JV-V03]
          Length = 185

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/182 (40%), Positives = 115/182 (63%), Gaps = 2/182 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+VI  +  KD M  +I+  +K++  +R G  + S+L+ +KV+ YG   PL Q+++V++ 
Sbjct: 3   NEVI--EKAKDNMKKSIAVFQKELGGIRAGVANASLLEGIKVDYYGVPTPLTQMSSVSIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+V+ +DK  +  +E  I  S+LG+ P  +G V+RI +P+ T ERR  + K     
Sbjct: 61  EARVLMVTPYDKSSLDDIEHAILASDLGITPANDGSVIRIVIPQLTGERRQEIAKQVGKL 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AEK KI+VRN+RRD MD LK+  K+G  +ED   SLE  +QK+TD   K ID   ++K +
Sbjct: 121 AEKGKIAVRNVRRDAMDTLKRQEKNGDITEDEQRSLEKQVQKVTDDATKEIDKLADQKSQ 180

Query: 182 EI 183
           EI
Sbjct: 181 EI 182


>gi|108761597|ref|YP_633491.1| ribosome recycling factor [Myxococcus xanthus DK 1622]
 gi|123247456|sp|Q1D1I2|RRF_MYXXD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|108465477|gb|ABF90662.1| ribosome recycling factor [Myxococcus xanthus DK 1622]
          Length = 185

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +K R+  ++  L+ D+  +RTGR S ++L+ V+V+ YG+  PL+ VA+V   EPR++
Sbjct: 6   VAELKGRIDKSLEGLRTDLTRVRTGRASIAILEGVRVDYYGTPTPLSGVASVNAPEPRLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K ++  +E+ + E+NLG+NP+ +G+++R+P P  TEERR  + K      E+ K
Sbjct: 66  TIKPWEKSVLKDIEKALREANLGINPMNDGEMIRLPFPPLTEERRKDIAKQVKTKGEEFK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRD  + LK   K  K +ED    +   +QK TD+ I  +D   ++K+KE+M  
Sbjct: 126 VTIRNLRRDANEVLKTQLKDKKITEDDHKRITEVVQKQTDAGITQVDEIVKKKEKEVMEV 185


>gi|224283164|ref|ZP_03646486.1| ribosome recycling factor [Bifidobacterium bifidum NCIMB 41171]
 gi|310287530|ref|YP_003938788.1| ribosome recycling factor RRF [Bifidobacterium bifidum S17]
 gi|311064443|ref|YP_003971168.1| ribosome recycling factor Rrf [Bifidobacterium bifidum PRL2010]
 gi|313140313|ref|ZP_07802506.1| ribosome recycling factor [Bifidobacterium bifidum NCIMB 41171]
 gi|309251466|gb|ADO53214.1| ribosome recycling factor RRF [Bifidobacterium bifidum S17]
 gi|310866762|gb|ADP36131.1| Rrf Ribosome Recycling Factor [Bifidobacterium bifidum PRL2010]
 gi|313132823|gb|EFR50440.1| ribosome recycling factor [Bifidobacterium bifidum NCIMB 41171]
          Length = 184

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA++ V EPR L
Sbjct: 5   VEQAKEQMNKSVENTKENFAGIRTGRANPALLNGIVVDYYGAPTPLKAVASIGVPEPRTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D    + VE+ + +S+LG+NP  +G V+RI +PE T ERR   VK+A + AE  K
Sbjct: 65  SVTPFDVSQASKVEKALRDSDLGVNPNRDGNVIRITMPELTSERRKEYVKLAKSKAEDGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + + KS K G+  ED    L  ++ K+T      +D+ FE K+KEIM  
Sbjct: 125 VAVRNIRRKAKETIDKSVKDGEMGEDEGDRLLKELDKVTKQVTDQLDALFETKQKEIMEV 184


>gi|282855676|ref|ZP_06264985.1| ribosome recycling factor [Pyramidobacter piscolens W5455]
 gi|282586476|gb|EFB91735.1| ribosome recycling factor [Pyramidobacter piscolens W5455]
          Length = 182

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 75/176 (42%), Positives = 115/176 (65%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N+ ++M   +  L  +   +RTGR  P +++ VKV+ YGS  P+ Q+AN+TV E RML++
Sbjct: 5   NLDEKMAKVLEHLDSEFQGIRTGRAHPGLVEGVKVDYYGSLTPIKQLANITVPEARMLII 64

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + +DK  V  +E+ I  +N+GL P V+G  +R+ VPE T ERR   VK+A   AE++KI+
Sbjct: 65  APFDKGAVKLIEKAILAANIGLTPNVDGSNIRLVVPELTGERRKEFVKMASKAAEEAKIA 124

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +RNIRRD  D  KK  K+ + +ED +  + +D QKITD  I  +D  F++K+KEI+
Sbjct: 125 LRNIRRDANDAYKKQEKASEITEDDLKKMLDDAQKITDKFIARVDDEFKKKEKEIL 180


>gi|34580849|ref|ZP_00142329.1| ribosome recycling factor [Rickettsia sibirica 246]
 gi|28262234|gb|EAA25738.1| ribosome recycling factor [Rickettsia sibirica 246]
          Length = 186

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 86/179 (48%), Positives = 123/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRTELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++KK+EIM  
Sbjct: 128 SLRNIRRDGNEALKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKKQEIMTV 186


>gi|327441021|dbj|BAK17386.1| ribosome recycling factor [Solibacillus silvestris StLB046]
          Length = 185

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 64/163 (39%), Positives = 109/163 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  +I+   +++ ++R G  + S+LD + V+ YGS  P+NQ+A ++V E R+L
Sbjct: 6   LNQAQEKMTKSINAFSRELASIRAGVANASLLDRITVDYYGSPTPINQMAGISVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +DK ++  +E+ I  S++G+ P  +G V+R+ VP  TEERR  LVK     +E++K
Sbjct: 66  VIQPYDKSILGEIEKAIMRSDIGITPTNDGNVIRLAVPALTEERRKELVKQVKKESEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTI 169
           ++VRN+RRD  D LKK  K+G+ +ED +    +DIQK+TD++I
Sbjct: 126 VAVRNVRRDANDDLKKLEKNGEITEDELRGFNDDIQKLTDNSI 168


>gi|157164672|ref|YP_001467726.1| ribosome recycling factor [Campylobacter concisus 13826]
 gi|166230771|sp|A7ZG18|RRF_CAMC1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|112800347|gb|EAT97691.1| ribosome recycling factor [Campylobacter concisus 13826]
          Length = 185

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 113/186 (60%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ D Q  K+     I+ LK+D  TLRTG+V+ ++LD V V+ YGS  PLNQVA V  
Sbjct: 2   LNKIYDTQ--KEGCEKAIASLKRDFTTLRTGKVNINILDNVMVDYYGSPTPLNQVATVLT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++   I  +N+G+NP  +G+ +++  P  T E+R    K A A
Sbjct: 60  SDASTIAITPWEKSMIKAISSAIQAANIGVNPNSDGESVKLFFPPMTVEQRQENAKHAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RN+R+D  D +KK  K    +ED     ++++QKITD+    ID+  +EK+
Sbjct: 120 MGEKAKVSIRNVRKDANDEVKKLEKDKAITEDESKKGQDEVQKITDTYTAKIDTLVKEKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 AELLKI 185


>gi|310823274|ref|YP_003955632.1| ribosome-recycling factor [Stigmatella aurantiaca DW4/3-1]
 gi|309396346|gb|ADO73805.1| Ribosome-recycling factor [Stigmatella aurantiaca DW4/3-1]
          Length = 186

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+ +K R+  T+  LK+++  +RTGR S ++LD V+V+ YG+  PL  VA+V   EPR++
Sbjct: 7   LKELKGRIDKTLDDLKRELAKVRTGRASTAILDGVRVDYYGTPTPLAGVASVNAPEPRLI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK  +  +E+ + E+NLG+NP+ +G+++R+P P  TEERR  + K   +  E+ K
Sbjct: 67  TIKPFDKSSLKEIEKALREANLGINPMNDGEMIRLPFPPLTEERRKDIAKQVKSKGEEHK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  + LK+  K+   +ED        +QK TD+ +  +DS    K+KE+M  
Sbjct: 127 VAIRNIRRDANEALKEKLKAKTITEDDNKRTSEKVQKETDAGVAQVDSIIAAKEKEVMSV 186


>gi|124005436|ref|ZP_01690277.1| ribosome recycling factor [Microscilla marina ATCC 23134]
 gi|123989258|gb|EAY28836.1| ribosome recycling factor [Microscilla marina ATCC 23134]
          Length = 187

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 71/188 (37%), Positives = 113/188 (60%), Gaps = 3/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M + I   L   K+ M   +     ++  +R G+  P+MLD ++V+ YG+  PLNQVA+V
Sbjct: 1   MEEEIQMYLAEAKELMDKAVQHTNHELNKIRAGKAMPNMLDSIQVDYYGAPTPLNQVASV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           T  + R L++  ++K ++A +E+ I +S+LGLNP  +G+ +RI +P  TEERR  LVK  
Sbjct: 61  TAPDARTLMIRPFEKSVIAGIEKAIRDSDLGLNPQNDGENIRINIPALTEERRKQLVKQV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E  K+S+RN+R+D  + LK  +K G ASED V   E  +QK+T+     +D  +E+
Sbjct: 121 KQEIESGKVSIRNVRKDTNNSLKDLQKEG-ASEDEVKRAEESVQKLTNDFTNKVDDLYEK 179

Query: 179 KKKEIMHF 186
           K+ E+M  
Sbjct: 180 KETELMTV 187


>gi|89255661|ref|YP_513022.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314162|ref|YP_762885.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           OSU18]
 gi|118496843|ref|YP_897893.1| ribosome recycling factor [Francisella tularensis subsp. novicida
           U112]
 gi|134302594|ref|YP_001122565.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|156501611|ref|YP_001427676.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167009898|ref|ZP_02274829.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           FSC200]
 gi|187932152|ref|YP_001892137.1| ribosome recycling factor [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|194324473|ref|ZP_03058245.1| ribosome recycling factor [Francisella tularensis subsp. novicida
           FTE]
 gi|254367052|ref|ZP_04983088.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           257]
 gi|254368532|ref|ZP_04984548.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           FSC022]
 gi|254372207|ref|ZP_04987699.1| ribosome recycling factor [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254373690|ref|ZP_04989174.1| hypothetical protein FTDG_01699 [Francisella novicida GA99-3548]
 gi|290953220|ref|ZP_06557841.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313588|ref|ZP_06804177.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           URFT1]
 gi|122325794|sp|Q0BNT6|RRF_FRATO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122501262|sp|Q2A5H9|RRF_FRATH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230786|sp|A7N9R7|RRF_FRATF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230787|sp|A0Q4H4|RRF_FRATN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|166230788|sp|A4IZU3|RRF_FRATW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238691516|sp|B2SDZ4|RRF_FRATM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|89143492|emb|CAJ78668.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129061|gb|ABI82248.1| protein-synthesizing GTPase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|118422749|gb|ABK89139.1| ribosome recycling factor [Francisella novicida U112]
 gi|134050371|gb|ABO47442.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134252878|gb|EBA51972.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           257]
 gi|151569937|gb|EDN35591.1| ribosome recycling factor [Francisella novicida GA99-3549]
 gi|151571412|gb|EDN37066.1| hypothetical protein FTDG_01699 [Francisella novicida GA99-3548]
 gi|156252214|gb|ABU60720.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|157121435|gb|EDO65626.1| ribosome recycling factor [Francisella tularensis subsp. holarctica
           FSC022]
 gi|187713061|gb|ACD31358.1| ribosome recycling factor [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|194321308|gb|EDX18794.1| ribosome recycling factor [Francisella tularensis subsp. novicida
           FTE]
 gi|328676312|gb|AEB27182.1| Ribosome recycling factor [Francisella cf. novicida Fx1]
          Length = 185

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  ++  L  D+  +RTGR  P +L  V ++ YG   P+ Q AN+TVL+ R L
Sbjct: 6   LKDAENRMKKSLEVLADDLAKIRTGRAHPDLLAHVTIDYYGVETPITQAANITVLDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K + + +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+  +  E  +
Sbjct: 66  GITPWEKGLSSKIEKAILTSDLGLNPTNLGDSLRVPMPALNEERRKELVKLVKSETEAGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD    +K+  K  + +ED     E+DIQKITD  I   D+   +K++++M  
Sbjct: 126 VSIRNIRRDANGDIKELLKEKEITEDQAKKAEDDIQKITDKMIAQADALAAKKEQDLMAV 185


>gi|261337802|ref|ZP_05965686.1| ribosome recycling factor [Bifidobacterium gallicum DSM 20093]
 gi|270277256|gb|EFA23110.1| ribosome recycling factor [Bifidobacterium gallicum DSM 20093]
          Length = 184

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   KD+M  T+   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V EPR L
Sbjct: 5   VDQAKDQMAKTVESTKENFSGIRTGRANPALLNGIVVDYYGAPTPLKAVATIGVPEPRTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ +D     +VE+ + +S+LG +P  +G V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 65  SITPFDASQTNAVEKALRDSDLGASPRRDGNVIRLTMPELTGERRKEYVKLAKTKAEDGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + + K+ K G+  ED    L  ++ K+T      +D+  E K+KEIM  
Sbjct: 125 VAVRNIRRKAKEAIDKAVKDGEMGEDEGDRLLKELDKLTKQVTDELDTLLEAKQKEIMEV 184


>gi|295396357|ref|ZP_06806523.1| ribosome recycling factor [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970797|gb|EFG46706.1| ribosome recycling factor [Brevibacterium mcbrellneri ATCC 49030]
          Length = 185

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 102/180 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+    +M   I   +     +RTGR +P +   + VE YG+  P+ Q+A+  V E R +
Sbjct: 6   LKEASAKMDGAIEATQSAFGNVRTGRANPGLFANIPVEYYGTPTPMQQLASFQVPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  S++G NP  +G V+R+ +PE TEERR   VK+    AE+ +
Sbjct: 66  LITPYDRGALTDIENALRNSDIGANPANDGNVIRVTLPELTEERRKEYVKIVKGDAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ISVRN+RR   + L++ +K G+A ED V     ++ +IT   +  IDS    K+KE++  
Sbjct: 126 ISVRNVRRKAKEQLERIQKDGEAGEDEVKHALGELDEITKKKVDEIDSLLAAKEKELLEV 185


>gi|319939517|ref|ZP_08013877.1| ribosome-recycling factor [Streptococcus anginosus 1_2_62CV]
 gi|319811503|gb|EFW07798.1| ribosome-recycling factor [Streptococcus anginosus 1_2_62CV]
          Length = 185

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+L
Sbjct: 6   VEKAKERMTQSHQSLAREFGSIRAGRANASLLDRISVEYYGVETPLNQIASITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LVTPFDKSSIKDIERALNASDLGITPASDGTVIRLVIPALTEETRRDLAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDEAVKHIDDMTASKEKELIEV 185


>gi|116792122|gb|ABK26242.1| unknown [Picea sitchensis]
          Length = 173

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 77/173 (44%), Positives = 112/173 (64%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  T+  +K +  ++RTGR SP+ LD V+VE YGS V L  +A V+V +   L+V  +DK
Sbjct: 1   MEKTLETIKTNFNSIRTGRASPAFLDRVEVEYYGSPVNLKSLAQVSVPDGGTLLVQPYDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + S+E+ I +SNLGL P  +G V+R+ +P+ T ERR  L+KV    AE+ KI++RNIR
Sbjct: 61  SSLKSIEKAISKSNLGLTPSNDGNVIRLSIPQLTSERRKELLKVVAKIAEEGKIAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD +   +K  K  K SED V  L  D+QK+TD  IK +DS +++K+KE+M  
Sbjct: 121 RDAIKAYEKLEKEKKLSEDNVKDLSGDLQKVTDEFIKKVDSLYKQKEKELMTV 173


>gi|325207224|gb|ADZ02676.1| ribosome recycling factor [Neisseria meningitidis NZ-05/33]
          Length = 185

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QVANVT+L+   + 
Sbjct: 7   KTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVANVTLLDACTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLMAI 185


>gi|239948540|ref|ZP_04700293.1| ribosome recycling factor [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922816|gb|EER22840.1| ribosome recycling factor [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 202

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 85/179 (47%), Positives = 123/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 24  KNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 83

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 84  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRKELVKLAHKYGEDTKI 143

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM  
Sbjct: 144 SLRNIRRDGNEELKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIMTV 202


>gi|257867709|ref|ZP_05647362.1| ribosome recycling factor [Enterococcus casseliflavus EC30]
 gi|257874036|ref|ZP_05653689.1| ribosome recycling factor [Enterococcus casseliflavus EC10]
 gi|257876615|ref|ZP_05656268.1| ribosome recycling factor [Enterococcus casseliflavus EC20]
 gi|325571087|ref|ZP_08146659.1| ribosome recycling factor [Enterococcus casseliflavus ATCC 12755]
 gi|257801792|gb|EEV30695.1| ribosome recycling factor [Enterococcus casseliflavus EC30]
 gi|257808200|gb|EEV37022.1| ribosome recycling factor [Enterococcus casseliflavus EC10]
 gi|257810781|gb|EEV39601.1| ribosome recycling factor [Enterococcus casseliflavus EC20]
 gi|325156172|gb|EGC68358.1| ribosome recycling factor [Enterococcus casseliflavus ATCC 12755]
          Length = 185

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KD+M      L++++  +R GR + S+LD V V  YG   PLNQ+A++T+ E R+L
Sbjct: 6   LTEAKDKMKKAAENLQRELGQIRAGRANASILDRVMVTYYGVPTPLNQMASITIPEARIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK M+  VE+ I +S++G+ P  +G V+R+ +P+ TEERR  L K     AE +K
Sbjct: 66  MITPFDKTMIQEVEKAIMQSDIGITPANDGTVIRLVIPQLTEERRKELAKDVKKEAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD M+  KK  K+G  +ED +   E ++Q  TD++IK ID+   EK++E++  
Sbjct: 126 IAVRNIRRDAMEAYKKQEKAGDITEDDLRESEKEVQTATDNSIKEIDAIAAEKEQELLEV 185


>gi|255320443|ref|ZP_05361624.1| ribosome recycling factor [Acinetobacter radioresistens SK82]
 gi|262378339|ref|ZP_06071496.1| ribosome recycling factor [Acinetobacter radioresistens SH164]
 gi|255302415|gb|EET81651.1| ribosome recycling factor [Acinetobacter radioresistens SK82]
 gi|262299624|gb|EEY87536.1| ribosome recycling factor [Acinetobacter radioresistens SH164]
          Length = 184

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 110/179 (61%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R LV
Sbjct: 7   KDSEQRMQKSLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA   AE +K+
Sbjct: 67  VQPFERTMVSAIDKAIRESDLGLNPITA-DAIRVPMPALTEETRRDMQKVARTEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K   K  + SED       +IQKITD  +  +D     K+ E+M  
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDDERRAGEEIQKITDKYVAEVDKRLAAKEAELMKV 184


>gi|313886710|ref|ZP_07820420.1| ribosome recycling factor [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332300074|ref|YP_004441995.1| Ribosome-recycling factor [Porphyromonas asaccharolytica DSM 20707]
 gi|312923872|gb|EFR34671.1| ribosome recycling factor [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|332177137|gb|AEE12827.1| Ribosome-recycling factor [Porphyromonas asaccharolytica DSM 20707]
          Length = 186

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +  M   + FL+  +  +R G+ +P +LD + VEAYG+ +PLNQVA VTV + R L 
Sbjct: 8   KPAEQSMLKAVEFLQDKLDRIRAGKANPVLLDDITVEAYGAPMPLNQVATVTVPDARTLA 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WDK+++  +E+GI +SNLG+ P   G+++RI +P  TEERR  LVK   A +E++KI
Sbjct: 68  ITPWDKKLIKDIEKGILDSNLGITPTNNGEMIRIAMPPLTEERRKELVKQCKAESEEAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN RRD +D  KK+ K+    ED +   END QK+ D  I  ++     K+KEIM  
Sbjct: 128 SIRNARRDAIDAAKKAVKAEDLPEDTIKQTENDAQKLHDKYIGRVEEALAAKEKEIMTI 186


>gi|71066089|ref|YP_264816.1| ribosome recycling factor [Psychrobacter arcticus 273-4]
 gi|123648272|sp|Q4FRH6|RRF_PSYA2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|71039074|gb|AAZ19382.1| ribosome recycling factor [Psychrobacter arcticus 273-4]
          Length = 184

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 112/179 (62%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM  T+  L+     +RTGR  P ML  V V  YGS  PLNQVA+V V + R L+
Sbjct: 7   QDGEARMQKTLEALESTFSKVRTGRAHPGMLSGVMVSYYGSDTPLNQVASVNVEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +D+ MV ++++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE S++
Sbjct: 67  VQPFDRTMVQAIDKAIREADLGLNPMTA-DVIRVPMPALTEETRRDMQKLARGEAENSRV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD M+ +K+  K  + SED      +DIQKITD  I+ IDS   +K+ ++M  
Sbjct: 126 SIRNIRRDMMNDIKELAKEKEISEDDEHRASDDIQKITDKYIETIDSRLSKKESDLMSV 184


>gi|227529099|ref|ZP_03959148.1| ribosome recycling factor [Lactobacillus vaginalis ATCC 49540]
 gi|227350943|gb|EEJ41234.1| ribosome recycling factor [Lactobacillus vaginalis ATCC 49540]
          Length = 186

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 75/178 (42%), Positives = 118/178 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KD+M  +   L++ +  +R GR + S+L+ VKV+ YG+  PLNQVA++T+ E R L
Sbjct: 8   LDEAKDKMAKSGDALRRTLADIRAGRANASLLNGVKVDYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D+  + ++E+ I+ +NLGL P  +G  +RI +P+ TEERR  LVK   A  EK+K
Sbjct: 68  LVTPYDESSLDNIEKAIYAANLGLTPQNDGSAIRILIPQLTEERRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RR+ MD LKK  K G  ++D    LE  +Q  TD+ IKN+++   +K+KE+M
Sbjct: 128 VAVRNVRREAMDDLKKGNKDGDFNDDEFHELEKKVQTETDNGIKNLENIAADKEKELM 185


>gi|313885301|ref|ZP_07819052.1| ribosome recycling factor [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619407|gb|EFR30845.1| ribosome recycling factor [Eremococcus coleocola ACS-139-V-Col8]
          Length = 185

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 76/185 (41%), Positives = 117/185 (63%), Gaps = 1/185 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I L+  KDRM  ++    +++ ++R G  + S+LD ++V  YG   PLNQ+A++TV
Sbjct: 1   MADTI-LKETKDRMAKSVEAFSRELASIRAGVANASILDRIQVTYYGVPTPLNQLASITV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E RML+V+ +DK     +E+ I +S++G+NP  +G V+R+ +P  T+ERR  LVKV   
Sbjct: 60  PEARMLLVTPYDKSSTTEIEKAILQSDVGINPTSDGDVIRLVIPALTKERREELVKVVGK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +KIS+RNIRRD +D  KK  K+ + +ED V   E  IQ ITD  +K +D+  + K+
Sbjct: 120 ENETAKISIRNIRRDQIDAAKKLEKNNELTEDDVKDYEKQIQAITDEKVKELDALAKAKE 179

Query: 181 KEIMH 185
            EIM+
Sbjct: 180 DEIMN 184


>gi|282882018|ref|ZP_06290659.1| ribosome recycling factor [Peptoniphilus lacrimalis 315-B]
 gi|300813724|ref|ZP_07094044.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|281298048|gb|EFA90503.1| ribosome recycling factor [Peptoniphilus lacrimalis 315-B]
 gi|300512181|gb|EFK39361.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 185

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 76/170 (44%), Positives = 116/170 (68%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
           TIS LK+D  ++R GR + S+LD + V+ YG   P+NQVA ++  EPRML++S WD +++
Sbjct: 16  TISSLKEDFQSIRAGRANTSLLDKITVDYYGQQSPINQVAGLSAPEPRMLMISPWDPKLI 75

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
             +E+ I +S+LG+ P  +G+V+R+ +P+ TEERR  L KV    +E +KI++RNIRRD 
Sbjct: 76  PEIEKSILKSDLGITPSNDGKVIRLIIPQLTEERRKDLTKVVGKNSEAAKIAIRNIRRDA 135

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           MD +KK+ KS + +ED   S E +IQK+TD  I+ ID   + K+ E+M  
Sbjct: 136 MDEIKKAEKSKEITEDDRKSNEEEIQKLTDKYIEEIDKITKAKEIELMEI 185


>gi|157964221|ref|YP_001499045.1| ribosome recycling factor [Rickettsia massiliae MTU5]
 gi|157843997|gb|ABV84498.1| Ribosome recycling factor [Rickettsia massiliae MTU5]
          Length = 188

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 85/179 (47%), Positives = 122/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++ +M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 10  KNLQGKMEKALKVLDHELKGLRTGRASINLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 69

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 70  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPTLTEERRQELVKLAHKYGEDTKI 129

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM  
Sbjct: 130 SLRNIRRDGNEELKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIMTV 188


>gi|212715798|ref|ZP_03323926.1| hypothetical protein BIFCAT_00699 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661165|gb|EEB21740.1| hypothetical protein BIFCAT_00699 [Bifidobacterium catenulatum DSM
           16992]
          Length = 184

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K +M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V EPR L
Sbjct: 5   VEQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPEPRTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A   AE  K
Sbjct: 65  SVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKGKAEDGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + L K+ K G+  ED    L  ++ K+T  T   +D+  E K+KEIM  
Sbjct: 125 VAVRNIRRKAKESLDKAIKDGEMGEDDGDRLLKELDKVTKQTTDELDTLLEAKQKEIMEV 184


>gi|238751448|ref|ZP_04612940.1| Ribosome-recycling factor [Yersinia rohdei ATCC 43380]
 gi|238710315|gb|EEQ02541.1| Ribosome-recycling factor [Yersinia rohdei ATCC 43380]
          Length = 185

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 73/166 (43%), Positives = 107/166 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM          +  +RTGR SPS+LD ++VE YG+  PL Q+AN+ V + R L 
Sbjct: 7   KDTEVRMEKCFEAFLTHISKIRTGRASPSILDGIQVEYYGTATPLRQLANIVVEDSRTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+D+ + A+VE+ I  S+LGLNP   G V+R+P+P  TEERR  L+KV  A AE+ ++
Sbjct: 67  LTVFDRSLSAAVEKAIMTSDLGLNPSSAGTVIRVPLPALTEERRKDLIKVVRAEAEQGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           SVRN+RRD  + LK   K  + SED     ++DIQK+TD  IK +D
Sbjct: 127 SVRNVRRDANEKLKALLKDKEISEDEDRRSQDDIQKLTDIFIKKVD 172


>gi|153864070|ref|ZP_01997081.1| Ribosome recycling factor [Beggiatoa sp. SS]
 gi|152146433|gb|EDN72917.1| Ribosome recycling factor [Beggiatoa sp. SS]
          Length = 188

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 122/186 (65%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++++  ++ ++RM  ++  LK D++ +R+GR   S+L+ + V  YG+  P+NQ+AN++V
Sbjct: 4   MSEMLQ-KDAEERMDKSVKALKDDLIKIRSGRAHTSLLEHITVPYYGTDTPINQIANISV 62

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           ++PR L V+ ++K +++ VE+ I +S+LGLNP   G +LR+P+P  TEERR  LVKV   
Sbjct: 63  IDPRTLGVAPYEKNILSIVEKAIRDSDLGLNPTNVGNLLRVPLPPMTEERRRDLVKVVRH 122

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AEK+++++RNIRRD    LK+       S+D     E  IQK+T+  I  +DS  +EK+
Sbjct: 123 DAEKARVAIRNIRRDANHDLKELMNDKDISKDEEHHGEEMIQKLTNKLIAQVDSVLQEKE 182

Query: 181 KEIMHF 186
            ++M  
Sbjct: 183 AKLMEV 188


>gi|217077680|ref|YP_002335398.1| ribosome recycling factor [Thermosipho africanus TCF52B]
 gi|226703270|sp|B7IDI0|RRF_THEAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|217037535|gb|ACJ76057.1| frr ribosome recycling factor [Thermosipho africanus TCF52B]
          Length = 185

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM  ++  + +++  LRTGR SP++L+ +K++ YG   P+NQVA + V E R L
Sbjct: 6   LKEAELRMKKSVEAIDEELKKLRTGRPSPALLEEIKIDYYGVPTPINQVATINVTEERSL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+K +++++E+ I  S+LGLNP  +G V+R+  P  T E+R   VK      E  K
Sbjct: 66  IIKPWEKNLLSAIEKAIQASDLGLNPTNDGNVVRLVFPSPTTEQRQKWVKKTKEIVEHGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD +  LK+  K+G+ SED    LE ++Q +TD  I+ +D  FE K+KEIM F
Sbjct: 126 IAVRNIRRDVIKELKEMTKNGEISEDDEKRLEKEVQNLTDKYIEELDKLFERKEKEIMEF 185


>gi|320535432|ref|ZP_08035541.1| ribosome recycling factor [Treponema phagedenis F0421]
 gi|320147719|gb|EFW39226.1| ribosome recycling factor [Treponema phagedenis F0421]
          Length = 184

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 79/184 (42%), Positives = 123/184 (66%), Gaps = 2/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN +    + +++M  +I+ LK D  TLRTGR S S+ + ++VE YG   PLNQVA++++
Sbjct: 1   MNDIH--TSYEEKMKKSIAALKDDFNTLRTGRASASLFEKIRVECYGELSPLNQVASISI 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R++V+  WDK ++ ++E+ I +S L LNP  +G+++RI +P  TE+RR  L K A  
Sbjct: 59  PEARLVVIQPWDKSLLPNIEKAILKSELSLNPSNDGKIIRIAIPPLTEDRRKELAKQAKN 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+S+I++RNIRRDG++  KK +K G  SED + + E   QK TD+ I  I++   EK+
Sbjct: 119 IAEQSRIAIRNIRRDGIEEAKKLQKEGSLSEDDLKTAEEKFQKATDAHISEINTILAEKE 178

Query: 181 KEIM 184
           KEI+
Sbjct: 179 KEIL 182


>gi|225352148|ref|ZP_03743171.1| hypothetical protein BIFPSEUDO_03763 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157395|gb|EEG70734.1| hypothetical protein BIFPSEUDO_03763 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 184

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K +M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V EPR L
Sbjct: 5   VEQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPEPRTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A   AE  K
Sbjct: 65  SVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKGKAEDGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + L K+ K G+  ED    L  ++ KIT  T   +D+  E K+KEIM  
Sbjct: 125 VAVRNIRRKAKESLDKAIKDGEMGEDEGDRLLKELDKITKQTTDELDTLLEAKQKEIMEV 184


>gi|150024539|ref|YP_001295365.1| ribosome recycling factor [Flavobacterium psychrophilum JIP02/86]
 gi|190360243|sp|A6GWS4|RRF_FLAPJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149771080|emb|CAL42547.1| Ribosome recycling factor [Flavobacterium psychrophilum JIP02/86]
          Length = 187

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 3/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M + ID  L + K+ M  +I+ L+K+ + +R G+ SP+ML  V V+ YGS  PL+QVA +
Sbjct: 1   MTEEIDFILDSTKESMEGSIAHLEKEFLNIRAGKASPAMLGSVFVDYYGSATPLSQVAKI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +V + R + +  ++K M+  +E+ I  +N+G NP+  G V+ I VP  TEERR  L K A
Sbjct: 61  SVPDARTITLQPFEKNMLQVIEKAIMIANIGFNPMNNGDVIIISVPPLTEERRRELAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AE +KI VRN+R+D    +KK  K G  SED     E  +QK+TDS I+ +D     
Sbjct: 121 KTEAEDAKIGVRNVRKDSNSDIKKLEKEG-TSEDACKIAEESVQKLTDSFIRKVDELLVV 179

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 180 KEAEIMKV 187


>gi|42527846|ref|NP_972944.1| ribosome recycling factor [Treponema denticola ATCC 35405]
 gi|47116998|sp|P61310|RRF_TREDE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|41818674|gb|AAS12863.1| ribosome recycling factor [Treponema denticola ATCC 35405]
          Length = 185

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 77/178 (43%), Positives = 119/178 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N +++M  T+  LK++   LRTGR S ++ D ++V  YG   PLNQ+AN+++ E R++V
Sbjct: 7   KNCEEKMKKTVVALKEEFNMLRTGRASSALFDKIRVNCYGESTPLNQLANISIPEARLVV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK ++  +E+ + +++L +NP  +G+V+RI +P  TE+RR  L K A   AE S++
Sbjct: 67  IQPWDKGLLVEIEKAVLQADLSVNPTNDGKVIRIAIPPLTEDRRKDLAKKAKTIAENSRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           SVRNIRRDG+D  KK +K GK SED + + E+  QK TD+ I  I+   E K+KEIM 
Sbjct: 127 SVRNIRRDGIDEAKKLQKDGKISEDQLKTAEDAFQKSTDAYIAEINKVLEAKEKEIME 184


>gi|300812543|ref|ZP_07092960.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496416|gb|EFK31521.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 185

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/177 (39%), Positives = 109/177 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K  M  +I   + ++ T+R G  + S+LD V VE YG   PL Q+A +T+ EPR+L
Sbjct: 6   IAKAKSNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQLAGITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E  I  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++K
Sbjct: 66  MITPYDKTSLNDIEHAILASDLGLTPANDGNVIRLVIPQLTGERRQEIAKEVGKLAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+R++ M  LKK  K G+ +ED    LE ++QK+TD + K ID   + K+KEI
Sbjct: 126 IAVRNVRQEAMKALKKQEKDGEITEDEERRLEKEVQKVTDESTKKIDQMADNKRKEI 182


>gi|227514718|ref|ZP_03944767.1| ribosome recycling factor [Lactobacillus fermentum ATCC 14931]
 gi|227086922|gb|EEI22234.1| ribosome recycling factor [Lactobacillus fermentum ATCC 14931]
          Length = 186

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M  +   LK+ +  +R GR + S+L+ V VE YG+  PLNQ+A++T+ E R L
Sbjct: 7   LAEAKEKMAKSGDALKRTLADIRAGRANASLLNTVTVEYYGAPTPLNQLASITIPEARQL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +  +ER I+ESNLGL P  +G+ +R+ VP+ TE+RR  LVK   A  EK+K
Sbjct: 67  LISPYDKTTLKDIERAIYESNLGLTPQNDGETIRLVVPQLTEDRRKELVKDVKAEMEKAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K G  ++D    LE  +Q+ TD+ IKN++    +K+KE++ 
Sbjct: 127 VAVRNVRREAMDDLKKGNKDGDFNDDEFHDLEKKVQEETDAGIKNLEQIAADKEKELLE 185


>gi|153812431|ref|ZP_01965099.1| hypothetical protein RUMOBE_02830 [Ruminococcus obeum ATCC 29174]
 gi|149831593|gb|EDM86680.1| hypothetical protein RUMOBE_02830 [Ruminococcus obeum ATCC 29174]
          Length = 183

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 113/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +M  T+   + ++ T+R GR +P +LD + V+ YGS  PL QVAN+TV E RM+
Sbjct: 5   VQKYEQKMTKTLDGFEAELTTIRAGRANPHILDKITVDYYGSPTPLQQVANITVPEARMI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++  +E+ I  S+LGLNP  +G+++R+ +PE TEERR  LVK      E +K
Sbjct: 65  QIQPWESSLIKGIEKAILTSDLGLNPSNDGKIVRLVLPELTEERRKDLVKDVKKKGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  D  KK  K    SED V  LE+ +QK+TD  IK ID+  E K KEI+  
Sbjct: 125 VAVRNIRRDANDAFKKLTKQ-DVSEDEVKDLEDAVQKLTDKFIKKIDAAVEVKSKEILTV 183


>gi|262372666|ref|ZP_06065945.1| ribosome recycling factor [Acinetobacter junii SH205]
 gi|262312691|gb|EEY93776.1| ribosome recycling factor [Acinetobacter junii SH205]
          Length = 184

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 110/179 (61%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+
Sbjct: 7   KDSEQRMQKTLDSLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLI 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA   AE +K+
Sbjct: 67  VQPFERTMVSAIDKAIRESDLGLNPITA-DSIRVPLPALTEETRRDMQKVARNEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K   K  + SED       DIQKITD  +  +D     K+ E+M  
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDDERRAGEDIQKITDKYVAEVDKRLAAKEAELMKV 184


>gi|168335176|ref|ZP_02693282.1| ribosome recycling factor [Epulopiscium sp. 'N.t. morphotype B']
          Length = 180

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D+M  +I  LK+D  T+R GR +P++LD + V+ YG+  P+ QV N+ V E R+L
Sbjct: 1   MKKFEDKMEKSILSLKEDFNTIRAGRANPNVLDKIVVDYYGTLTPIKQVGNIVVPEARIL 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD  ++  +E+ I+ES++G+NP  +G+V+R+  PE T+ERR  L K      E +K
Sbjct: 61  QIQPWDSSLLKGIEKAINESDIGINPSNDGKVIRLVFPELTQERRKELTKEIKKKGENAK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+ MD  KK +K+ + +ED   + EN +QK+TD  +  ID   E+K  E++  
Sbjct: 121 VAIRNIRREAMDSFKKQQKANEITEDEQTTNENSVQKLTDKFVAEIDKLIEQKSSEVLSV 180


>gi|260551688|ref|ZP_05825762.1| ribosome releasing factor [Acinetobacter sp. RUH2624]
 gi|260405431|gb|EEW98925.1| ribosome releasing factor [Acinetobacter sp. RUH2624]
          Length = 184

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+
Sbjct: 7   KDSEQRMMKTLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLI 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA + AE +K+
Sbjct: 67  VQPFERTMVSAIDKAIRESDLGLNPITA-DSIRVPLPALTEETRRDMQKVARSEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M  
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELMKV 184


>gi|182417573|ref|ZP_02948898.1| ribosome recycling factor [Clostridium butyricum 5521]
 gi|237668448|ref|ZP_04528432.1| ribosome recycling factor [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182378586|gb|EDT76114.1| ribosome recycling factor [Clostridium butyricum 5521]
 gi|237656796|gb|EEP54352.1| ribosome recycling factor [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 185

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++N +++M  TIS L+ D+ T++ GR +P+MLD ++VE YGS  PL+QVAN++  EPR+L
Sbjct: 6   IKNAEEKMKKTISVLESDLSTMKAGRANPTMLDRIQVEYYGSMCPLSQVANISAPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K M+  +ER I +S+LGLNP  +G V+R+ VPE T E R  LVK      E++K
Sbjct: 66  MITPWEKPMLKDIERAILKSDLGLNPSNDGSVIRLVVPELTAETRKTLVKNVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR+IR+   D +K  +K G  SED +   E+D+QK TD+ +K ID+    K+KE++  
Sbjct: 126 VAVRSIRKAANDKIKTLKKDGDISEDQIKKGEDDVQKKTDAVVKQIDAIIAAKEKEVLSV 185


>gi|300088119|ref|YP_003758641.1| ribosome recycling factor [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527852|gb|ADJ26320.1| ribosome recycling factor [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 186

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 66/185 (35%), Positives = 119/185 (64%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    +Q  + +MG +I  L +++  +RTGR S ++++ V+V+  G+  P++ +ANV+V
Sbjct: 1   MNANEIMQTAEKKMGISIEVLHRELGAIRTGRASTAIIEHVQVDYAGTPTPIHHLANVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
              RML++  WD+ M+  +E+ I +S+LGL P  +GQV+R+ +P  ++ERRL L ++   
Sbjct: 61  PNARMLLIQPWDRTMMGPIEKAIMKSDLGLTPSNDGQVIRLSIPPLSQERRLELTRMVAK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  K+++RN+RR+ +DHLKK  K  + S+D     ++ +QK+TDS I   D   ++K 
Sbjct: 121 RVEDDKVAIRNLRREALDHLKKMEKDKELSQDESRRAQDALQKLTDSYIAKADELGKQKD 180

Query: 181 KEIMH 185
           +E+++
Sbjct: 181 EELLN 185


>gi|238063326|ref|ZP_04608035.1| ribosome-recycling factor [Micromonospora sp. ATCC 39149]
 gi|237885137|gb|EEP73965.1| ribosome-recycling factor [Micromonospora sp. ATCC 39149]
          Length = 185

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K++   +RTGR + +M   V ++ YG+  PL Q+A++ V EPRM+
Sbjct: 6   LLEAEEKMERAIEHAKEEFGAIRTGRANAAMFSKVIIDYYGTPTPLPQMASIGVPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   + ++ER I +S+L +NP  EG  LRI +P+ TEERR  ++KVA    E++K
Sbjct: 66  IIKPYDNSQINAMERAIRDSDLSVNPNNEGNQLRILLPQMTEERRREMIKVARHKGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR G + L +  K G+  ED     E D+  +T   +  ID   + K+ E++  
Sbjct: 126 VAVRNIRRKGKEELDRLVKDGEVGEDEGRRAEKDLDDLTQKFVATIDELVKHKESELLEV 185


>gi|332686704|ref|YP_004456478.1| ribosome recycling factor [Melissococcus plutonius ATCC 35311]
 gi|332370713|dbj|BAK21669.1| ribosome recycling factor [Melissococcus plutonius ATCC 35311]
          Length = 185

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   +RM      L++++  +R GR + S+LD ++VE YG   P+NQ+A +++ E R+L
Sbjct: 6   LKETTERMKKAEQNLQRELGQIRAGRANASLLDRIQVEYYGVMTPVNQLATISIPEARIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +ER I  S++G++P  +G ++R+ +P+ TEERR  L K     AE +K
Sbjct: 66  MITPFDKNSIKDIERAIQASDIGISPTSDGNIIRLVIPQLTEERRKELAKEVKKEAENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD MD LKK  K+G  +ED + + E D+Q++TD++IKN+D+   EK+ EI+  
Sbjct: 126 IAVRNIRRDTMDTLKKQNKNGDITEDELHTSEKDVQQLTDNSIKNLDNIASEKEAEILEV 185


>gi|331701338|ref|YP_004398297.1| ribosome-recycling factor [Lactobacillus buchneri NRRL B-30929]
 gi|329128681|gb|AEB73234.1| Ribosome-recycling factor [Lactobacillus buchneri NRRL B-30929]
          Length = 187

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 120/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M +T   L+ D+ ++R G  + S+L  V V+ YG+  PLNQ+A++T+ E R++
Sbjct: 8   LTEAKEKMKNTREVLEHDVGSIRAGHANASLLSGVMVDYYGAPTPLNQIASITIPEARVI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+GI+E++LG++P  +G  +R+ VP  TE+RR  + K   A  EKSK
Sbjct: 68  LITPYDKSALEGIEKGIYEADLGISPANDGTAIRLAVPALTEDRRKEIAKQVKATGEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RR+ MD LK+S KS   ++D +   E+ +QK+TD  IK +D    +K++E+M+
Sbjct: 128 VAIRNVRREAMDTLKRSNKSEDITDDELHRYEDQVQKLTDDAIKGVDGIVADKEQEVMN 186


>gi|325962762|ref|YP_004240668.1| ribosome recycling factor [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468849|gb|ADX72534.1| ribosome recycling factor [Arthrobacter phenanthrenivorans Sphe3]
          Length = 185

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 104/180 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D  ++RTGR +P + + V VE YGS  PL Q+A+  + + R +
Sbjct: 6   LLEAEEKMDKAVEVAKEDFASVRTGRANPGLYNKVLVEYYGSPTPLQQLASFAIPDARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +ER + +S +G NP  +G V+RI +PE T+ERR   VK+     E +K
Sbjct: 66  LITPFDKTALRDIERALSDSEVGANPSNDGNVIRITIPELTKERRKEYVKIVKTKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR   + L +  K G+A ED     E ++  +T + +  ID   + K+ E++  
Sbjct: 126 VSIRNIRRKAKETLDRLVKDGEAGEDEGTRAEKELDNLTKAHVDGIDELLKRKEAELLEV 185


>gi|118602299|ref|YP_903514.1| ribosome recycling factor [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166231221|sp|A1AVT6|RRF_RUTMC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118567238|gb|ABL02043.1| ribosome recycling factor [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 185

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 118/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   Q+ + RM  +++ LK     +R  R   S+L+ + V+ YGS VPL+QVAN++V
Sbjct: 2   LNEI--QQDAQSRMNKSVASLKNAFSKIRANRAHSSLLEQIHVDYYGSMVPLSQVANISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R   VS W+K+MVA +E+ I  SNLGLNP   GQ++RIP+P  T+ERR  LVK+   
Sbjct: 60  EDSRTFKVSPWEKDMVAVIEKAIMTSNLGLNPQTMGQIMRIPLPPLTQERRGELVKIVKD 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++K+++RNIRRD     K+  K  + S D     EN IQKITD+ IK I++ F EK+
Sbjct: 120 EAEQAKVAIRNIRRDANSDFKELLKEKEISRDGARKAENSIQKITDTYIKEIEAKFCEKE 179

Query: 181 KEIMHF 186
             ++  
Sbjct: 180 NSLLEI 185


>gi|229817669|ref|ZP_04447951.1| hypothetical protein BIFANG_02940 [Bifidobacterium angulatum DSM
           20098]
 gi|229785458|gb|EEP21572.1| hypothetical protein BIFANG_02940 [Bifidobacterium angulatum DSM
           20098]
          Length = 184

 Score =  224 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K +M  T+   K++   +RTGR +P++L+ + V+ YG+  P+  VA++ V EPR L
Sbjct: 5   VEQAKAQMAKTVENTKENFAGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGVPEPRTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ I  S+LG++P  +G V+R+ +PE TEERR   VK+A   AE  K
Sbjct: 65  SVTPFDASQAGAVEKAIRNSDLGVSPNRDGNVIRLTMPELTEERRKEYVKLAKGKAEDGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + + KS K G   ED    L  D+ K+T S    ID+  E K+KEIM  
Sbjct: 125 VAVRNIRRKTKETIDKSVKDGDMGEDEGDRLLKDLDKVTKSVTDEIDALLETKQKEIMEV 184


>gi|23466062|ref|NP_696665.1| ribosome recycling factor [Bifidobacterium longum NCC2705]
 gi|189439270|ref|YP_001954351.1| ribosome recycling factor [Bifidobacterium longum DJO10A]
 gi|227547303|ref|ZP_03977352.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|239621373|ref|ZP_04664404.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|312132645|ref|YP_003999984.1| frr [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482870|ref|ZP_07941878.1| ribosome recycling factor [Bifidobacterium sp. 12_1_47BFAA]
 gi|322689306|ref|YP_004209040.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           157F]
 gi|322691318|ref|YP_004220888.1| ribosome recycling factor [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|34924973|sp|Q8G483|RRF_BIFLO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238692052|sp|B3DRT4|RRF_BIFLD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|23326787|gb|AAN25301.1| ribosome recycling factor [Bifidobacterium longum NCC2705]
 gi|189427705|gb|ACD97853.1| Ribosome recycling factor [Bifidobacterium longum DJO10A]
 gi|227212262|gb|EEI80158.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|239515834|gb|EEQ55701.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|291516839|emb|CBK70455.1| ribosome recycling factor [Bifidobacterium longum subsp. longum F8]
 gi|311773596|gb|ADQ03084.1| Frr [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915715|gb|EFV37129.1| ribosome recycling factor [Bifidobacterium sp. 12_1_47BFAA]
 gi|320456174|dbj|BAJ66796.1| ribosome recycling factor [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320460642|dbj|BAJ71262.1| ribosome recycling factor [Bifidobacterium longum subsp. infantis
           157F]
          Length = 183

 Score =  224 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K++M  T+   K++   +RTGR +P++L+ + V+ YG+  P+  VA++ V EPR L
Sbjct: 4   IDQAKEQMAKTVENTKENFSGIRTGRANPALLNGITVDYYGAPTPIKAVASIGVPEPRTL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ +  S+LG++P  +G V+R+ +PE TE+RR   VK+A   AE  K
Sbjct: 64  SVTPFDASQAGAVEKALRNSDLGISPNRDGNVIRLTMPELTEDRRKEYVKLAKGKAEDGK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + + K+ K G+  ED    L  D+ K+T S    ID+  E K+KEIM  
Sbjct: 124 VAVRNIRRKTKETIDKAVKDGEMGEDEGDRLLKDLDKVTKSVTDEIDTLLETKQKEIMEV 183


>gi|313124038|ref|YP_004034297.1| ribosome-recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280601|gb|ADQ61320.1| Ribosome-recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 185

 Score =  224 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 72/177 (40%), Positives = 109/177 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K  M  +I   + ++ T+R G  + S+LD V VE YG   PL Q+A +T+ EPR+L
Sbjct: 6   IAKAKSNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK  +  +E  I  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++K
Sbjct: 66  VITPYDKTSLNDIEHAILASDLGLTPANDGNVIRLVIPQLTGERRQEIAKEVGKLAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+R++ M  LKK  K G+ +ED    LE ++QKITD + K ID   + K+KEI
Sbjct: 126 IAVRNVRQEAMKALKKQEKDGEITEDEERRLEKEVQKITDESTKKIDQMADNKRKEI 182


>gi|294671220|ref|ZP_06736073.1| hypothetical protein NEIELOOT_02930 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307048|gb|EFE48291.1| hypothetical protein NEIELOOT_02930 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 185

 Score =  224 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS VP++QV +VT+L+ R + 
Sbjct: 7   KTAESKMLRSLEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVPVSQVGSVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M   +E+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFESNMAGKIEKAIRDSNLGLNPASVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+K+  K  + SED     E  +QK+TD+ I  +D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKRLLKDKEVSEDEARRGEEAVQKLTDNNIAEVDKILAAKEEDLMAV 185


>gi|326382902|ref|ZP_08204592.1| ribosome recycling factor [Gordonia neofelifaecis NRRL B-59395]
 gi|326198492|gb|EGD55676.1| ribosome recycling factor [Gordonia neofelifaecis NRRL B-59395]
          Length = 185

 Score =  224 bits (573), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++ L+ DM ++RTGR +P+M + V +E YG+  P+ QVA +   EPR++
Sbjct: 6   LLDAEEKMEKAVAHLRDDMASIRTGRANPAMFNKVVIEYYGAMTPITQVAGINTPEPRLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +++  +  +E  I  S+LG+NP  +G V+R+ VP+ TEERR  L K A    E +K
Sbjct: 66  VIKPYEQSTMNDIETAIRNSDLGVNPTNDGTVIRVAVPQLTEERRKQLGKQARGKGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR  +D LK+ +K G A ED V   E ++   T +    +D   + K+ E++  
Sbjct: 126 VAIRNVRRKAVDELKRIQKDGDAGEDEVTRAEKELDTTTRTYTDAVDELVKNKEAELLEV 185


>gi|169824406|ref|YP_001692017.1| ribosome recycling factor [Finegoldia magna ATCC 29328]
 gi|302380616|ref|ZP_07269081.1| ribosome recycling factor [Finegoldia magna ACS-171-V-Col3]
 gi|303233629|ref|ZP_07320283.1| ribosome recycling factor [Finegoldia magna BVS033A4]
 gi|238687737|sp|B0S187|RRF_FINM2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167831211|dbj|BAG08127.1| ribosome recycling factor [Finegoldia magna ATCC 29328]
 gi|302311559|gb|EFK93575.1| ribosome recycling factor [Finegoldia magna ACS-171-V-Col3]
 gi|302495063|gb|EFL54815.1| ribosome recycling factor [Finegoldia magna BVS033A4]
          Length = 185

 Score =  224 bits (573), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++++ +   T+  LK+++ T+R GR +PS+LD + VE YG+  PL QVA ++  E R+L
Sbjct: 6   LKDMETKADKTLHALKEELKTVRAGRANPSILDNIMVEYYGTSTPLKQVATISAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK ++  +E+ I  SNLG+ P  +G ++R+P P+ TE+RR  L KV   Y EKSK
Sbjct: 66  TIQPWDKSIMKEIEKQIQASNLGITPSNDGTIIRLPFPQLTEDRRKELTKVVKEYGEKSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD +D  KK  K+ + SED +  L +DIQ +TD   K ID+   +K+ E+M  
Sbjct: 126 VTIRSIRRDFVDDAKKMEKNAEISEDELHVLLDDIQSLTDKLTKEIDNIVTDKETELMEI 185


>gi|296395044|ref|YP_003659928.1| ribosome recycling factor [Segniliparus rotundus DSM 44985]
 gi|296182191|gb|ADG99097.1| ribosome recycling factor [Segniliparus rotundus DSM 44985]
          Length = 185

 Score =  224 bits (573), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM   +   K D   +RTGR + S+   V V+ YG+  P+ Q+++V   +PR++
Sbjct: 6   LFEAEERMELAVEVAKDDFAAIRTGRATASLFAKVVVDYYGTPTPIPQISSVQTPDPRLV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  ++   + ++E  I +S+LGLNP  +GQV+R+ +P  TEERR    K A   AE+++
Sbjct: 66  VIKPYEAGQLRAIEEAIQKSDLGLNPSNDGQVVRVAIPALTEERRKEFAKQARGKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RR   + L K  K G+  ED VA  E ++ K+T   +  ID   ++K+ E++  
Sbjct: 126 VTVRNVRRKANEQLGKLSKEGQTGEDDVARAEKELDKLTARFVGVIDELVKKKEAELLEV 185


>gi|154175389|ref|YP_001409189.1| ribosome recycling factor [Campylobacter curvus 525.92]
 gi|166230772|sp|A7H147|RRF_CAMC5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|112803518|gb|EAU00862.1| ribosome recycling factor [Campylobacter curvus 525.92]
          Length = 185

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 67/176 (38%), Positives = 107/176 (60%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           KD     I+ LK+D  TLRTG+V+ S+LD V ++ YGS  PLNQVA V   +   + ++ 
Sbjct: 10  KDGCEKAIASLKRDFTTLRTGKVNISILDHVMIDYYGSMTPLNQVATVLASDASTISITP 69

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           W+K M+ ++   I  +N+G+NP  +G+ +++  P  T E+R    K A A  EK+K+SVR
Sbjct: 70  WEKSMIKTISGAIQAANIGVNPNSDGECVKLFFPPMTIEQRQENAKHAKAMGEKAKVSVR 129

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           N+R+D  D +KK  K    +ED     ++++QKITD  +  ID+  +EK+ E++  
Sbjct: 130 NVRKDANDEVKKLEKDKAITEDESKKGQDEVQKITDGYVAKIDALVKEKEAELLKV 185


>gi|283955346|ref|ZP_06372845.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 414]
 gi|283793106|gb|EFC31876.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 414]
          Length = 185

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 64/186 (34%), Positives = 109/186 (58%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQKTQS--EKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK   A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQVKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKTISEDEAKKAYDEVQKLTDAYTAKIDESVKSKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 SELLKV 185


>gi|258645593|ref|ZP_05733062.1| ribosome recycling factor [Dialister invisus DSM 15470]
 gi|260402951|gb|EEW96498.1| ribosome recycling factor [Dialister invisus DSM 15470]
          Length = 185

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 79/181 (43%), Positives = 129/181 (71%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+++ ++M  +I  L+ +  ++RTG+ SPS+LD V V+ YGS  P+ QVA+VTV E RM
Sbjct: 5   ELKHLSEKMDKSIQALRNEFTSIRTGQASPSLLDRVFVDYYGSKTPVTQVASVTVPEARM 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           LVV  WDK ++  +E+ I+ S+LGL P+ +G ++R+ +P+ TE+RR  LVKV +  AE++
Sbjct: 65  LVVQPWDKGILKDIEKAINMSDLGLVPMNDGNLIRMAIPQLTEQRRKDLVKVVNKKAEEA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++RNIRRDG   LKK  K+   S+D++  +E+ IQK+TD  IK++++  ++K KEI+ 
Sbjct: 125 KVAIRNIRRDGNVFLKKEEKNSDISKDVIKDMEDKIQKLTDQKIKDLEAVTDKKVKEILS 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|282861391|ref|ZP_06270456.1| ribosome recycling factor [Streptomyces sp. ACTE]
 gi|282564049|gb|EFB69586.1| ribosome recycling factor [Streptomyces sp. ACTE]
          Length = 185

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 61/174 (35%), Positives = 104/174 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R++
Sbjct: 72  KSALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEFIKVAKTKAEDSKISIRSV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   + L K  K  ++ ED V   E ++   T   +  +D   + K+ E++  
Sbjct: 132 RRKAKESLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|296454244|ref|YP_003661387.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183675|gb|ADH00557.1| ribosome recycling factor [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 183

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K++M  T+   K++   +RTGR +P++L+ + V+ YG+  P+  VA++ V EPR L
Sbjct: 4   IDQAKEQMARTVENTKENFSGIRTGRANPALLNGITVDYYGAPTPIKAVASIGVPEPRTL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     +VE+ +  S+LG++P  +G V+R+ +PE TE+RR   VK+A   AE  K
Sbjct: 64  SVTPFDASQAGAVEKALRNSDLGISPNRDGNVIRLTMPELTEDRRKEYVKLAKGKAEDGK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + + K+ K G+  ED    L  D+ K+T S    ID+  E K+KEIM  
Sbjct: 124 VAVRNIRRKTKETIDKAVKDGEMGEDEGDRLLKDLDKVTKSVTDEIDTLLETKQKEIMEV 183


>gi|325685953|gb|EGD28016.1| ribosome recycling factor [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 185

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 71/177 (40%), Positives = 109/177 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K  M  +I   + ++ T+R G  + S+LD V VE YG   PL Q+A +T+ EPR+L
Sbjct: 6   IAKAKSNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ +DK  +  +E  I  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++K
Sbjct: 66  VITPYDKTSLNDIEHAILASDLGLTPANDGNVIRLVIPQLTGERRQEIAKEVGKLAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+R++ M  LKK  K G+ +ED    LE ++QK+TD + K ID   + K+KEI
Sbjct: 126 IAVRNVRQEAMKALKKQEKDGEITEDEERRLEKEVQKVTDESTKKIDQMADNKRKEI 182


>gi|297588384|ref|ZP_06947027.1| ribosome recycling factor [Finegoldia magna ATCC 53516]
 gi|297573757|gb|EFH92478.1| ribosome recycling factor [Finegoldia magna ATCC 53516]
          Length = 185

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++++ +   T+  L++++ T+R GR +PS+LD + V+ YG+  PL QVA ++  E R+L
Sbjct: 6   LKDMEAKADKTLHALREELKTVRAGRANPSILDNIMVDYYGTSTPLKQVATISAPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK ++  +E+ I  SNLG+ P  +G ++R+P P+ TE+RR  L KV   Y EKSK
Sbjct: 66  TIQPWDKSIMKEIEKQIQASNLGITPSNDGSIIRLPFPQLTEDRRKELTKVVKEYGEKSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD +D  KK  K+ + SED +  L +DIQ +TD   K ID+   +K+ E+M  
Sbjct: 126 VTIRSIRRDFVDDAKKMEKNAEISEDELHVLLDDIQSLTDKLTKEIDNIVTDKETELMEI 185


>gi|169633330|ref|YP_001707066.1| ribosome recycling factor [Acinetobacter baumannii SDF]
 gi|238688138|sp|B0VMU5|RRF_ACIBS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169152122|emb|CAP01021.1| ribosome releasing factor [Acinetobacter baumannii]
          Length = 184

 Score =  224 bits (572), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+
Sbjct: 7   KDSEQRMLKTLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLI 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MVA++++ I ES+LGLNPI     +R+P+P  TEE R  + K+A + AE +K+
Sbjct: 67  VQPFERTMVAAIDKAIRESDLGLNPITA-DSIRVPLPALTEETRRDMQKIARSEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M  
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELMRV 184


>gi|150021158|ref|YP_001306512.1| ribosome recycling factor [Thermosipho melanesiensis BI429]
 gi|166231524|sp|A6LMH6|RRF_THEM4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149793679|gb|ABR31127.1| ribosome recycling factor [Thermosipho melanesiensis BI429]
          Length = 185

 Score =  224 bits (572), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  +++ + +++  LRTGR SP++L+ +KV+ YG   P+NQVA V V E R L
Sbjct: 6   VKKTEEKMKKSVNSIDEELKKLRTGRPSPALLEEIKVDYYGVPTPINQVATVNVTEERSL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+K ++ +VE+ I  S+LGLNP+ +G V+R+  P  T E+R   VK A    E  K
Sbjct: 66  IIKPWEKNLLNAVEKAIQASDLGLNPMNDGNVIRLVFPTPTTEQRQKWVKKAKDIVEHGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRR+ +  LK  +K+G+ SED    LE +IQ +TD  ++ +D  FE K+KEIM F
Sbjct: 126 IAVRNIRREILKELKDLKKNGEISEDDERRLEKEIQNLTDKYVEELDKLFERKEKEIMEF 185


>gi|171742888|ref|ZP_02918695.1| hypothetical protein BIFDEN_02005 [Bifidobacterium dentium ATCC
           27678]
 gi|171278502|gb|EDT46163.1| hypothetical protein BIFDEN_02005 [Bifidobacterium dentium ATCC
           27678]
          Length = 186

 Score =  224 bits (572), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 107/186 (57%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    +   K +M  ++   K++   +RTGR +P++ + + V+ YG+  PL  VA + V
Sbjct: 1   MNMANIVDQAKAQMAKSVESTKENFSGIRTGRANPALFNGITVDYYGAPTPLKAVATIGV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 61  PEPRTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKG 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G   ED    L  ++ K+T  T   +D+  E K+
Sbjct: 121 KAEDGKVAVRNIRRKTKESIDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDTLLEAKQ 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMEV 186


>gi|222054617|ref|YP_002536979.1| ribosome recycling factor [Geobacter sp. FRC-32]
 gi|254809513|sp|B9M5C3|RRF_GEOSF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|221563906|gb|ACM19878.1| ribosome recycling factor [Geobacter sp. FRC-32]
          Length = 185

 Score =  224 bits (572), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +   M  TI  L+K+   +RTGR S S+LD +KV+ YG+  PLNQVA + V EPR +
Sbjct: 6   ISGMSSHMDKTIDSLRKEYQKVRTGRASTSLLDEIKVDFYGTLSPLNQVATLAVPEPRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD +M+  +E+ I  +NLGL P  +G+++R+ +P  TEERR  +VK    +AE +K
Sbjct: 66  TLQPWDAKMIPPIEKAIMNANLGLTPANDGKLIRLNLPPLTEERRKEIVKQLKKFAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR+ +D LKK  K  K SED +   E D+Q +T+S +  ID     K+KE+M  
Sbjct: 126 VAVRNIRREAIDDLKKLEKEKKISEDDLKRAEKDVQDVTNSHVARIDEVLLHKEKEVMEV 185


>gi|296112767|ref|YP_003626705.1| ribosome recycling factor [Moraxella catarrhalis RH4]
 gi|295920461|gb|ADG60812.1| ribosome recycling factor [Moraxella catarrhalis RH4]
 gi|326561010|gb|EGE11375.1| ribosome recycling factor [Moraxella catarrhalis 7169]
 gi|326564386|gb|EGE14614.1| ribosome recycling factor [Moraxella catarrhalis 12P80B1]
 gi|326566761|gb|EGE16900.1| ribosome recycling factor [Moraxella catarrhalis 103P14B1]
 gi|326567397|gb|EGE17512.1| ribosome recycling factor [Moraxella catarrhalis BC1]
 gi|326569316|gb|EGE19376.1| ribosome recycling factor [Moraxella catarrhalis BC8]
 gi|326571477|gb|EGE21492.1| ribosome recycling factor [Moraxella catarrhalis BC7]
 gi|326575240|gb|EGE25168.1| ribosome recycling factor [Moraxella catarrhalis CO72]
 gi|326576673|gb|EGE26580.1| ribosome recycling factor [Moraxella catarrhalis 101P30B1]
 gi|326577652|gb|EGE27529.1| ribosome recycling factor [Moraxella catarrhalis O35E]
          Length = 184

 Score =  224 bits (572), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 76/178 (42%), Positives = 110/178 (61%), Gaps = 1/178 (0%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + + RM  +I  L+     LRTGR  P +L  V V  YGS  PLNQVA++ V + R L+V
Sbjct: 8   DGESRMQKSIEALEAAFSKLRTGRAHPGILSGVMVSYYGSDTPLNQVASINVEDSRTLLV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +++ MV +V++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE+++IS
Sbjct: 68  QPFERSMVQAVDKAIREADLGLNPMTA-DVIRVPMPALTEETRRDMQKIARNDAEQTRIS 126

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIRRD +  +K   K  + SED      +DIQK+TD  I  IDS  E+K+ E+M  
Sbjct: 127 VRNIRRDMLSDIKDLLKDKEISEDDERRAADDIQKLTDKFIATIDSRLEKKESELMEV 184


>gi|330718876|ref|ZP_08313476.1| ribosome recycling factor [Leuconostoc fallax KCTC 3537]
          Length = 181

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 72/182 (39%), Positives = 114/182 (62%), Gaps = 3/182 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  + K RM      L++++  +R GR +P++L+ V+VE YG+  PLNQVA++ V E R
Sbjct: 3   FDFSDAKARMQKAQDALQRELAGIRAGRANPALLNRVEVEYYGAMTPLNQVASIQVPEAR 62

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L+V+ +DK  + ++   I+ S+LGLNP  +G  +R+ +P+ TEERR  L K   A  EK
Sbjct: 63  ILLVTPFDKTALDAIVHAINVSDLGLNPASDGNAIRLVIPQLTEERRKELSKDVKAEGEK 122

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K+++RNIRRD MD +K   K    +ED +   E + QK+TD  +K ID    EK++E++
Sbjct: 123 AKVAIRNIRRDVMDSIK---KDDALNEDDMHKAETEAQKLTDENVKAIDKIAAEKEEELL 179

Query: 185 HF 186
             
Sbjct: 180 TI 181


>gi|254495059|ref|ZP_05107983.1| Ribosome recycling factor [Polaribacter sp. MED152]
 gi|85819409|gb|EAQ40566.1| Ribosome recycling factor [Polaribacter sp. MED152]
          Length = 184

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 81/188 (43%), Positives = 120/188 (63%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  L   K+ MG+ I+ L+K+++++R G+ +P+ML  V V+ YGS  PL+QVANV
Sbjct: 1   MNEEIEFILDTAKEAMGNAITHLEKELVSIRAGKATPAMLSTVMVDYYGSQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R L +  W+K M+  +E+ I  +NLGLNP+  G ++ I VP  TEERR  L K A
Sbjct: 61  NTPDARTLSIQPWEKNMLQPIEKAIQIANLGLNPMNNGDLIMINVPPLTEERRKGLAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE +K+ VRN R+D  + +KK     + S+DM    E+D+QK+TD+ +KNID     
Sbjct: 121 KAEAEHAKVGVRNARKDANNDIKKV----EISDDMKKIAEDDVQKLTDTYVKNIDEKLAV 176

Query: 179 KKKEIMHF 186
           K+KEIM  
Sbjct: 177 KEKEIMTI 184


>gi|87302617|ref|ZP_01085434.1| ribosome releasing factor [Synechococcus sp. WH 5701]
 gi|87282961|gb|EAQ74918.1| ribosome releasing factor [Synechococcus sp. WH 5701]
          Length = 179

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 61/178 (34%), Positives = 107/178 (60%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++   M  ++   ++   T+RTGR +PS+LD + +E YG+  PL  VA+++  + + + +
Sbjct: 2   DLDASMRKSLEATQRTFNTIRTGRANPSLLDKITIEYYGAETPLRSVASLSTPDSQTIQI 61

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   +AS+E+ I  S+LGL P  +G+++RI +P  T +RR    K+A  YAE  K++
Sbjct: 62  QPFDSAAMASIEKAIAMSDLGLTPNNDGRLIRINIPPLTADRRKEFCKLASRYAEDGKVA 121

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRRD ++ +KK  K G+ SED     +  +QK+TD  I  ++    EK+ +I+  
Sbjct: 122 LRNIRRDAIEKIKKQEKDGELSEDQSRDEQEKVQKLTDRFIVELEKSLAEKEADILKV 179


>gi|306822703|ref|ZP_07456081.1| ribosome recycling factor [Bifidobacterium dentium ATCC 27679]
 gi|304554248|gb|EFM42157.1| ribosome recycling factor [Bifidobacterium dentium ATCC 27679]
          Length = 186

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 108/186 (58%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    +   K +M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V
Sbjct: 1   MNMANIVDQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 61  PEPRTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKG 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G   ED    L  ++ K+T  T   +D+  E K+
Sbjct: 121 KAEDGKVAVRNIRRKTKESIDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDTLLEAKQ 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMEV 186


>gi|253681713|ref|ZP_04862510.1| ribosome recycling factor [Clostridium botulinum D str. 1873]
 gi|253561425|gb|EES90877.1| ribosome recycling factor [Clostridium botulinum D str. 1873]
          Length = 185

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M  +IS LKK++ +++ G+ +PSMLD +KVE YGS  P+NQ+ANV+  EPR+L
Sbjct: 6   LNKSKEKMDKSISVLKKELSSMKAGKANPSMLDKIKVEYYGSETPINQLANVSSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  +  +ER I +S+LGLNP  +G V+R+ VPE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKNSLKDIERAILQSDLGLNPSNDGSVIRLIVPELTEETRKEIVKKVKKMGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K  + +ED     E+ +QKITD  IK ID     K+K++M  
Sbjct: 126 VAIRSIRRDANDKIKNLKKDNEITEDEAKEGEDSVQKITDKAIKEIDEVISLKEKDVMTV 185


>gi|206900181|ref|YP_002250924.1| ribosome recycling factor [Dictyoglomus thermophilum H-6-12]
 gi|206739284|gb|ACI18342.1| ribosome recycling factor [Dictyoglomus thermophilum H-6-12]
          Length = 185

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            + I+++M   +  +KK+   +RTG+ S  + D +K+  YG+ +PLNQVA + + E R +
Sbjct: 6   FKEIEEKMKKAVEVVKKEFQGIRTGKPSIGIFDEIKISYYGNMMPLNQVATLKIAEGRTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK ++  +E+ I +S LGL P  +GQV+R+  P  TEERR  LVKV H  AE  +
Sbjct: 66  LIQPWDKSIIGEIEKAILKSELGLTPQNDGQVIRVVFPPLTEERRKELVKVVHKEAENGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD ++  KK ++ GK SED    L+ ++QK+TD  I+ I+   E K+KEIM  
Sbjct: 126 VAIRNIRRDYLEIFKKEKQEGKISEDEFYRLQEELQKMTDKFIEEIEKLIEMKEKEIMEV 185


>gi|15806522|ref|NP_295233.1| ribosome recycling factor [Deinococcus radiodurans R1]
 gi|22001957|sp|Q9RU82|RRF_DEIRA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|6459273|gb|AAF11077.1|AE001995_2 ribosome recycling factor [Deinococcus radiodurans R1]
          Length = 183

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 71/185 (38%), Positives = 118/185 (63%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  +  +Q + +++M   I   + ++  LRTGR +P +L  + V+ YGS +P++QVA++T
Sbjct: 1   MADMKSIQADTREKMNKAIEAFENNLSVLRTGRANPGILKKIVVDYYGSQMPIDQVASIT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             +PR LV++ WD+  +  +E+ I +S+LGLNP  +G  + I +P  TEERR  LVK A 
Sbjct: 61  TPDPRTLVITPWDRGALNPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
            YAE ++I+VRN+R+  +D +KK        ED +   E D+QKITD  +  ++S F++K
Sbjct: 121 NYAEDARIAVRNLRKHALDEVKKVE---GLGEDEIKRGEADVQKITDEYVARVESVFQKK 177

Query: 180 KKEIM 184
           ++EI+
Sbjct: 178 EQEIL 182


>gi|116514309|ref|YP_813215.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122274959|sp|Q049U5|RRF_LACDB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116093624|gb|ABJ58777.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 185

 Score =  224 bits (571), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 110/179 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K  M  +I   + ++ T+R G  + S+LD V VE YG   PL Q+A +T+ EPR+L
Sbjct: 6   IAKAKRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E  I  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++K
Sbjct: 66  MITPYDKSSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+R++ M  LKK  K G+ +ED    LE ++QK+TD + K ID   + K+KEI+ 
Sbjct: 126 IAVRNVRQEAMKALKKQEKDGEITEDEERRLEKEVQKVTDESTKKIDQMADNKRKEIIQ 184


>gi|330504241|ref|YP_004381110.1| ribosome recycling factor [Pseudomonas mendocina NK-01]
 gi|328918527|gb|AEB59358.1| ribosome recycling factor [Pseudomonas mendocina NK-01]
          Length = 185

 Score =  224 bits (571), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  L +++ ++RTGR  PS+LD +KV A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMSKSLEALGRNLASIRTGRAHPSILDSIKVPAWGSDMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A   AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQARGVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD +  LKK  K+ + SED      +++QKITD  I ++D   E K+ ++M  
Sbjct: 127 AVRNVRRDALAELKKLSKAKEISEDEERRAADELQKITDKFIGDVDKALEVKEADLMAV 185


>gi|116075317|ref|ZP_01472577.1| ribosome releasing factor [Synechococcus sp. RS9916]
 gi|116067514|gb|EAU73268.1| ribosome releasing factor [Synechococcus sp. RS9916]
          Length = 182

 Score =  224 bits (571), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 105/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+++  M  ++   ++   T+RTGR + S+LD + VE YG+  PL  +A +T  + + + 
Sbjct: 4   QDLEASMQKSVEATQRMFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLTTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S LG  P  +G+++RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDMGALASIEKAIAMSELGFTPNNDGKLIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D +KK  K G  SED     ++ +QK  D  I  ++    EK+ +I+  
Sbjct: 124 ALRNIRRDAIDKIKKQEKDGDFSEDQSHDEQDSVQKTLDKYIGILEKHLAEKEADILKV 182


>gi|169795682|ref|YP_001713475.1| ribosome recycling factor [Acinetobacter baumannii AYE]
 gi|213158373|ref|YP_002319671.1| ribosome recycling factor [Acinetobacter baumannii AB0057]
 gi|215483169|ref|YP_002325376.1| ribosome recycling factor [Acinetobacter baumannii AB307-0294]
 gi|239501622|ref|ZP_04660932.1| ribosome recycling factor [Acinetobacter baumannii AB900]
 gi|260554744|ref|ZP_05826965.1| ribosome recycling factor [Acinetobacter baumannii ATCC 19606]
 gi|301346282|ref|ZP_07227023.1| ribosome recycling factor [Acinetobacter baumannii AB056]
 gi|301512091|ref|ZP_07237328.1| ribosome recycling factor [Acinetobacter baumannii AB058]
 gi|301595691|ref|ZP_07240699.1| ribosome recycling factor [Acinetobacter baumannii AB059]
 gi|332852500|ref|ZP_08434239.1| ribosome recycling factor [Acinetobacter baumannii 6013150]
 gi|332871296|ref|ZP_08439845.1| ribosome recycling factor [Acinetobacter baumannii 6013113]
 gi|332873908|ref|ZP_08441848.1| ribosome recycling factor [Acinetobacter baumannii 6014059]
 gi|226703248|sp|B7H1U3|RRF_ACIB3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703249|sp|B7I9V2|RRF_ACIB5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238685521|sp|A3M657|RRF_ACIBT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238688040|sp|B0V6F0|RRF_ACIBY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169148609|emb|CAM86475.1| ribosome releasing factor [Acinetobacter baumannii AYE]
 gi|193077567|gb|ABO12401.2| ribosome releasing factor [Acinetobacter baumannii ATCC 17978]
 gi|213057533|gb|ACJ42435.1| ribosome recycling factor [Acinetobacter baumannii AB0057]
 gi|213987944|gb|ACJ58243.1| ribosome recycling factor [Acinetobacter baumannii AB307-0294]
 gi|260411286|gb|EEX04583.1| ribosome recycling factor [Acinetobacter baumannii ATCC 19606]
 gi|322508741|gb|ADX04195.1| ribosome releasing factor [Acinetobacter baumannii 1656-2]
 gi|323518346|gb|ADX92727.1| ribosome recycling factor [Acinetobacter baumannii TCDC-AB0715]
 gi|332729202|gb|EGJ60545.1| ribosome recycling factor [Acinetobacter baumannii 6013150]
 gi|332731580|gb|EGJ62866.1| ribosome recycling factor [Acinetobacter baumannii 6013113]
 gi|332737894|gb|EGJ68781.1| ribosome recycling factor [Acinetobacter baumannii 6014059]
          Length = 184

 Score =  224 bits (571), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+
Sbjct: 7   KDSEQRMLKTLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLI 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MVA++++ I ES+LGLNPI     +R+P+P  TEE R  + K+A + AE +K+
Sbjct: 67  VQPFERTMVAAIDKAIRESDLGLNPITA-DSIRVPLPALTEETRRDMQKIARSEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M  
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELMKV 184


>gi|119025802|ref|YP_909647.1| ribosome recycling factor [Bifidobacterium adolescentis ATCC 15703]
 gi|154487366|ref|ZP_02028773.1| hypothetical protein BIFADO_01216 [Bifidobacterium adolescentis
           L2-32]
 gi|166230413|sp|A1A1I2|RRF_BIFAA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118765386|dbj|BAF39565.1| ribosome recycling factor [Bifidobacterium adolescentis ATCC 15703]
 gi|154083884|gb|EDN82929.1| hypothetical protein BIFADO_01216 [Bifidobacterium adolescentis
           L2-32]
          Length = 184

 Score =  224 bits (571), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  ++D    K +M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V
Sbjct: 1   MATIVD--QAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 59  PEPRTLAVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKIAKG 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + L K+ K G   ED    L  ++ K+T  T   +D+  E K+
Sbjct: 119 KAEDGKVAVRNIRRKAKESLDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDALLETKQ 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEV 184


>gi|261416241|ref|YP_003249924.1| ribosome recycling factor [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372697|gb|ACX75442.1| ribosome recycling factor [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325448|gb|ADL24649.1| ribosome recycling factor [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 177

 Score =  224 bits (571), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 115/180 (63%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +    ++M   I   +++   +R G+ SP++L+ V+++ YG+  P++QVA ++V EPRML
Sbjct: 1   MSEYSEKMDKAIEATEREFSKIRAGQASPAILNGVRIDYYGTPTPISQVAKISVPEPRML 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ W+K++V ++++ I  +N+GL P+ +G  +R+ +P  T ERR  L K+A  +AE  +
Sbjct: 61  LVTPWEKQLVDTIDKAILAANIGLTPMKDGNCIRVTLPILTTERRKELAKIARKHAEDGR 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D LK   K+ + SED V   +++IQK TD  I  ID    EK+ +I+  
Sbjct: 121 VAIRNIRRDANDALK---KNKEISEDEVKKQQDEIQKATDKAIAEIDRLLAEKEADILKV 177


>gi|325143201|gb|EGC65541.1| ribosome recycling factor [Neisseria meningitidis 961-5945]
          Length = 185

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M  ++  LK+++  +RTGR    +LD V+VE +GS V ++QVANVT+L+ R + 
Sbjct: 7   KTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEYWGSMVSVSQVANVTLLDARTIG 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M A VE+ I +SNLGLNP   G ++R+P+P  TEERR  L+KV    AE+ ++
Sbjct: 67  VKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPMPMLTEERRKDLIKVVRGEAEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD  DH+KK  K  + SED     E  +QK+TD  I   D     K++++M  
Sbjct: 127 SIRNVRRDANDHIKKLLKDKEISEDEARRGEEAVQKLTDKYITEADKLLTAKEEDLMAI 185


>gi|157828071|ref|YP_001494313.1| ribosome recycling factor [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932770|ref|YP_001649559.1| ribosome recycling factor [Rickettsia rickettsii str. Iowa]
 gi|166231219|sp|A8GQY0|RRF_RICRS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044068|sp|B0BWC7|RRF_RICRO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157800552|gb|ABV75805.1| ribosome recycling factor [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165907857|gb|ABY72153.1| ribosome recycling factor (RRF) [Rickettsia rickettsii str. Iowa]
          Length = 186

 Score =  223 bits (570), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 84/179 (46%), Positives = 122/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N++++M   +  L  ++  LRT R S ++LD V VEAYGS +PL+QVA+++  + R + 
Sbjct: 8   KNLQEKMEKALKVLDHELKGLRTSRASVNLLDSVTVEAYGSKMPLSQVASLSTPDARTIN 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KI
Sbjct: 68  VQVWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRTELVKLAHKYGEDTKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRDG + LKK  K    ++D   SL   +QK+TD     +DS  ++K++EIM  
Sbjct: 128 SLRNIRRDGNEVLKKLEKDNVIAKDEHHSLSEQVQKLTDDYSSKVDSVIKQKEQEIMTV 186


>gi|226356272|ref|YP_002786012.1| ribosome recycling factor [Deinococcus deserti VCD115]
 gi|259494537|sp|C1CVP1|RRF_DEIDV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226318262|gb|ACO46258.1| putative Ribosome recycling factor (Ribosome-releasing factor)
           (RRF) [Deinococcus deserti VCD115]
          Length = 183

 Score =  223 bits (570), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 75/185 (40%), Positives = 118/185 (63%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  +  +Q + ++RMG  I  L+ ++  LRTGR +P +L  V V+ YGS +P++QVA++T
Sbjct: 1   MADMKSIQADARERMGKAIEALESNLSVLRTGRANPGILKKVIVDYYGSTMPIDQVASIT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R LV++ WD+  +  +E+ I +S+LGLNP  +G  + I +P  TEERR  LVK A 
Sbjct: 61  TPDARTLVITPWDRGALGPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
            YAE ++I+VRNIR+  +D +KK        +D +   E ++QKITD  I  +DS F +K
Sbjct: 121 NYAEDARIAVRNIRKHALDEVKKVE---GVGDDEIKRGEAEVQKITDEFIARVDSTFHKK 177

Query: 180 KKEIM 184
           ++EI+
Sbjct: 178 EQEIL 182


>gi|281355491|ref|ZP_06241985.1| ribosome recycling factor [Victivallis vadensis ATCC BAA-548]
 gi|281318371|gb|EFB02391.1| ribosome recycling factor [Victivallis vadensis ATCC BAA-548]
          Length = 188

 Score =  223 bits (570), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++++ M  T   LK     +RTG+ SP++++ + VE YG+   L  +A +T  EPR+L
Sbjct: 9   LDSLEEHMMKTEDALKNSFAAIRTGKASPALVEGITVEYYGTQTRLRDIAGITAPEPRLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD   V+++E+ I  SN+G+ P+ +G+ L++P+PE +++RR ALVK A +  E +K
Sbjct: 69  VIQPWDASAVSAIEKAILASNVGITPMSDGRTLKLPIPELSQDRRAALVKQAKSEVEDAK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+G D  KK++K G  +ED    +  DIQK+TD  I  +D  F  K+KE+M  
Sbjct: 129 VALRNIRREGNDAAKKAQKDGLLTEDEHKKMLEDIQKLTDRYIAGLDKEFSAKEKELMTV 188


>gi|146308071|ref|YP_001188536.1| ribosome recycling factor [Pseudomonas mendocina ymp]
 gi|166231209|sp|A4XWT8|RRF_PSEMY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145576272|gb|ABP85804.1| ribosome recycling factor [Pseudomonas mendocina ymp]
          Length = 185

 Score =  223 bits (570), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RMG ++  L +++ ++RTGR  PS+LD VKV A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMGKSLEALDRNLASIRTGRAHPSILDSVKVPAWGSDMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A   AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAIMTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQARGVAEDAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+RRD +  LKK  K+ + SED      +++QKITD  I ++D   E K+ ++M  
Sbjct: 127 AVRNVRRDALAELKKLAKAKEISEDEERRAADELQKITDKFIADVDKALEVKEADLMAV 185


>gi|157414532|ref|YP_001481788.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           81116]
 gi|172047024|sp|A8FK24|RRF_CAMJ8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157385496|gb|ABV51811.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           81116]
 gi|315932033|gb|EFV10986.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 327]
          Length = 185

 Score =  223 bits (570), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQKTQS--EKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKSKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 SELLKV 185


>gi|34556750|ref|NP_906565.1| ribosome recycling factor [Wolinella succinogenes DSM 1740]
 gi|39932012|sp|Q7MAD8|RRF_WOLSU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|34482464|emb|CAE09465.1| RIBOSOME RECYCLING FACTOR [Wolinella succinogenes]
          Length = 186

 Score =  223 bits (570), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N+V   Q  K+ M  TI  +K+D  TLRTG+VS ++++ ++V+ YG+  PL+QV +V  
Sbjct: 3   LNEVY--QYTKEHMEKTIDAMKRDFATLRTGKVSTAIVEPIRVDYYGTPTPLSQVGSVIA 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   LV+S W+K ++  +E+ I E+N+G+NP  +G V+++  P  T E+R  + K A A
Sbjct: 61  SDATTLVISPWEKNLLKGIEKAIQEANIGVNPNNDGDVIKLFFPPMTSEQRKEIAKDAKA 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K++VRNIR++  D +KK  K    +ED      +++QK TD  +K ID   + K+
Sbjct: 121 LGEKAKVAVRNIRKESNDKIKKLEKDKLITEDQSKKAHDEVQKYTDDYVKKIDDMVKSKE 180

Query: 181 KEIMHF 186
           +EI+  
Sbjct: 181 EEILKV 186


>gi|308176749|ref|YP_003916155.1| ribosome-recycling factor [Arthrobacter arilaitensis Re117]
 gi|307744212|emb|CBT75184.1| ribosome-recycling factor [Arthrobacter arilaitensis Re117]
          Length = 185

 Score =  223 bits (570), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 59/180 (32%), Positives = 99/180 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  TI   K+D  T+RTGR  P M   V V+ YGS  PL Q+A+  V E R +
Sbjct: 6   LAETAEKMERTIDAAKEDFATIRTGRAHPGMYSKVMVDYYGSPTPLQQLASFAVPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ +D   +  +E+ + +  +G NP  +G+++R+ +P  TEERR   VK+A A  E ++
Sbjct: 66  TITPFDVTALREIEKALGDPEVGANPSSDGKMIRVVLPVLTEERRKEYVKLAKAKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN RR   D + K  K G+  ED     E D+  +T   + ++D   + K+ E++  
Sbjct: 126 VALRNHRRKAKDTIDKLVKDGEIGEDEGTRAEKDLDALTKKHVDSVDEILKNKEAELLEV 185


>gi|320008276|gb|ADW03126.1| ribosome recycling factor [Streptomyces flavogriseus ATCC 33331]
          Length = 185

 Score =  223 bits (570), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 62/174 (35%), Positives = 104/174 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R+I
Sbjct: 72  KTALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEFIKVAKTKAEDSKISIRSI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   + L K  K  ++ ED V   E ++   T   +  +D   + K+ E++  
Sbjct: 132 RRKAKESLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|157803342|ref|YP_001491891.1| ribosome recycling factor [Rickettsia canadensis str. McKiel]
 gi|166231218|sp|A8EXM3|RRF_RICCK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157784605|gb|ABV73106.1| ribosome recycling factor [Rickettsia canadensis str. McKiel]
          Length = 186

 Score =  223 bits (570), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 84/186 (45%), Positives = 125/186 (67%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+     +N++++M   +  L  ++  LRTGR S ++LD V VEAYGS +PL+QVA+++ 
Sbjct: 1   MDTETLKKNLQEKMEKALKVLDHELKGLRTGRASVNLLDSVIVEAYGSKIPLSQVASIST 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + V VWDK MV+ VE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH 
Sbjct: 61  PDARTINVQVWDKSMVSLVEKGITIANLGLTPATDGQLIRLPIPILTEERRKELVKLAHK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E +KIS+RNIRRDG + LKK  K+   ++D   SL   +QK+T+     +DS  ++K+
Sbjct: 121 YGEDTKISLRNIRRDGNEELKKLEKNNILTKDEHHSLSEQVQKLTNDYSNKVDSAIKQKE 180

Query: 181 KEIMHF 186
           +EIM  
Sbjct: 181 QEIMTV 186


>gi|331269638|ref|YP_004396130.1| ribosome recycling factor [Clostridium botulinum BKT015925]
 gi|329126188|gb|AEB76133.1| ribosome recycling factor [Clostridium botulinum BKT015925]
          Length = 185

 Score =  223 bits (570), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  TIS LKK++ +++ G+ +P+MLD +KVE YGS  P+NQ+ANV+  EPR+L
Sbjct: 6   LNKSQEKMDKTISVLKKELSSMKAGKANPAMLDKIKVEYYGSETPINQLANVSSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  +  +ER I +S+LGLNP  +G V+R+ VPE TEE R  +VK      E++K
Sbjct: 66  LIQPWDKNSLKDIERAILQSDLGLNPSNDGSVIRLIVPELTEETRKEIVKKVKKMGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K  + +ED     E+ +QKITD  IK ID     K+ ++M  
Sbjct: 126 VAIRSIRRDANDKIKNLKKDNEVTEDEAKEGEDSVQKITDKAIKQIDEVISSKENDVMSI 185


>gi|283456086|ref|YP_003360650.1| ribosome Recycling Factor (RRF) [Bifidobacterium dentium Bd1]
 gi|283102720|gb|ADB09826.1| Ribosome Recycling Factor (RRF) [Bifidobacterium dentium Bd1]
          Length = 184

 Score =  223 bits (570), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 108/186 (58%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  ++D    K +M  ++   K++   +RTGR +P++ + + V+ YG+  PL  VA + V
Sbjct: 1   MANIVD--QAKAQMAKSVESTKENFSGIRTGRANPALFNGITVDYYGAPTPLKAVATIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 59  PEPRTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKG 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G   ED    L  ++ K+T  T   +D+  E K+
Sbjct: 119 KAEDGKVAVRNIRRKTKESIDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDTLLEAKQ 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEV 184


>gi|167041121|gb|ABZ05881.1| putative Ribosome recycling factor [uncultured marine microorganism
           HF4000_001A02]
          Length = 185

 Score =  223 bits (570), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++   RM   ++  + ++  +RTGR +P +L+ ++VE YGS +P+NQV+ V++ +PR++ 
Sbjct: 7   KDATHRMDQAVAHTRMELAKVRTGRANPDLLNAIQVEYYGSMMPMNQVSTVSIPDPRLIT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  ++K ++  +E+ I  SNLGL P   G  + IP+P  +EERR  L+K  H   E+ ++
Sbjct: 67  LQPFEKSLIPVIEKAIMNSNLGLTPSNNGNAVLIPIPALSEERRKDLIKYVHQVVEEGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN+RRD + H+K+  K    SED +   E ++Q +TD  +++++   E K+KE+M F
Sbjct: 127 SVRNVRRDALHHVKEFGKEEHVSEDEIHRQETEMQTLTDKHVESLNEMQEHKEKELMAF 185


>gi|167752630|ref|ZP_02424757.1| hypothetical protein ALIPUT_00885 [Alistipes putredinis DSM 17216]
 gi|167659699|gb|EDS03829.1| hypothetical protein ALIPUT_00885 [Alistipes putredinis DSM 17216]
          Length = 185

 Score =  223 bits (569), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 116/186 (62%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L    DRM  TI  L+++++ +R G+ SP++L+ V V+ YGS  P++ VA+VTV
Sbjct: 1   MDTKTILSEASDRMQKTIEHLEEELLNIRAGKASPTVLNGVFVDYYGSQTPISGVASVTV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + + +++  WDK ++ ++E+ I +SN+GL P   G+ +R+ +P  TEERR  LVK    
Sbjct: 61  PDAKTILIQPWDKNLIRAIEKAIIDSNIGLTPSNNGEQIRLSIPPLTEERRKELVKQVRQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE ++IS+RN RRD ++  KK++K G  SED     E   QK+ D   K++D+  + K+
Sbjct: 121 EAETARISLRNARRDAVEAFKKAQKEG-MSEDEAKDGETQAQKLLDKFTKSLDAILDNKE 179

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 180 KEIMTV 185


>gi|315123821|ref|YP_004065825.1| ribosome releasing factor [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315017543|gb|ADT65636.1| ribosome releasing factor [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 185

 Score =  223 bits (569), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQKTQS--EKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAATNIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKNKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 SELLKV 185


>gi|256851266|ref|ZP_05556655.1| ribosome recycling factor [Lactobacillus jensenii 27-2-CHN]
 gi|260660690|ref|ZP_05861605.1| ribosome recycling factor [Lactobacillus jensenii 115-3-CHN]
 gi|282934734|ref|ZP_06339977.1| ribosome recycling factor [Lactobacillus jensenii 208-1]
 gi|297206133|ref|ZP_06923528.1| ribosome recycling factor [Lactobacillus jensenii JV-V16]
 gi|256616328|gb|EEU21516.1| ribosome recycling factor [Lactobacillus jensenii 27-2-CHN]
 gi|260548412|gb|EEX24387.1| ribosome recycling factor [Lactobacillus jensenii 115-3-CHN]
 gi|281301309|gb|EFA93610.1| ribosome recycling factor [Lactobacillus jensenii 208-1]
 gi|297149259|gb|EFH29557.1| ribosome recycling factor [Lactobacillus jensenii JV-V16]
          Length = 185

 Score =  223 bits (569), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 70/177 (39%), Positives = 114/177 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K+ M  +I+  +K++  +R G  + S+L+ VKV+ YG   PL Q+++VT+ E R+L
Sbjct: 6   IAKAKENMDKSIAVYQKELGNIRAGVANASLLEGVKVDYYGVPTPLTQMSSVTIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  + ++E  +  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++K
Sbjct: 66  LVTPYDKSSLDNIEHALLASDLGLTPANDGNVIRLVIPQLTGERREEIAKQVGKQAEQAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I++RN+RR+ MD LKK  K+G  +ED    LE D+QK+TD   K +D   +EK+KEI
Sbjct: 126 IAIRNVRREAMDSLKKQEKNGDITEDEQKRLEKDVQKVTDDATKRVDQLADEKRKEI 182


>gi|293609255|ref|ZP_06691557.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827707|gb|EFF86070.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122521|gb|ADY82044.1| ribosome releasing factor [Acinetobacter calcoaceticus PHEA-2]
          Length = 184

 Score =  223 bits (569), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 111/179 (62%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  T+  L+     +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+
Sbjct: 7   KDSEQRMLKTLESLELGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + K+A + AE +K+
Sbjct: 67  VQPFERTMVSAIDKAIRESDLGLNPITA-DAIRVPLPALTEETRRDMQKIARSEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M  
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELMKV 184


>gi|309800830|ref|ZP_07694962.1| ribosome recycling factor [Bifidobacterium dentium JCVIHMP022]
 gi|308222366|gb|EFO78646.1| ribosome recycling factor [Bifidobacterium dentium JCVIHMP022]
          Length = 184

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  ++D    K +M  ++   K++   +RTGR +P++L+ + V+ YG+  PL  VA + V
Sbjct: 1   MANIVD--QAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P  +G V+R+ +PE TEERR   VK+A  
Sbjct: 59  PEPRTLSVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKLAKG 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G   ED    L  ++ K+T  T   +D+  E K+
Sbjct: 119 KAEDGKVAVRNIRRKTKESIDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDTLLEAKQ 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEV 184


>gi|56707469|ref|YP_169365.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669940|ref|YP_666497.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370837|ref|ZP_04986842.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           FSC033]
 gi|60390229|sp|Q5NHX7|RRF_FRATT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122971071|sp|Q14JC9|RRF_FRAT1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56603961|emb|CAG44949.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320273|emb|CAL08332.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569080|gb|EDN34734.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           FSC033]
 gi|282158613|gb|ADA78004.1| ribosome recycling factor [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 185

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  ++  L  D+  +RTGR  P +L  V ++ YG   P+ Q AN+TVL+ R L
Sbjct: 6   LKDAENRMKKSLEVLADDLAKIRTGRAQPDLLAHVTIDYYGVETPITQAANITVLDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K + + +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+  +  E  +
Sbjct: 66  GITPWEKGLSSKIEKAILTSDLGLNPTNLGDSLRVPMPALNEERRKELVKLVKSETEAGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD    +K+  K  + +ED     E+DIQKITD  I   D+   +K++++M  
Sbjct: 126 VSIRNIRRDANGDIKELLKEKEITEDQAKKAEDDIQKITDKMIAQADALAAKKEQDLMAV 185


>gi|182435653|ref|YP_001823372.1| ribosome recycling factor [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178464169|dbj|BAG18689.1| putative ribosome recycling factor [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 186

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 61/174 (35%), Positives = 103/174 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V E RM VV+ +D
Sbjct: 13  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEARMAVVTPFD 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R+I
Sbjct: 73  KSALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEYIKVAKTKAEDSKISIRSI 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   + L K  K  ++ ED V   E ++   T   +  +D   + K+ E++  
Sbjct: 133 RRKAKETLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 186


>gi|332830277|gb|EGK02905.1| ribosome-recycling factor [Dysgonomonas gadei ATCC BAA-286]
          Length = 187

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 114/179 (63%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  +++M  ++ FL + +  +R G+ +P +LD +K+E YGS  PL+ VA +   + R +V
Sbjct: 10  QKAEEKMQASVEFLDETLSRIRAGKANPHILDGIKLEYYGSLTPLSGVAAINTPDARTIV 69

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  W+K+M+  VE+ I  S++G+ P   G+++R+ +P  TEERR  LVK A   AE +K+
Sbjct: 70  IQPWEKQMLKEVEKAILNSDVGITPDNNGEIIRLSIPPLTEERRKQLVKQAKQEAEDAKV 129

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN RRD +D +KKS K G  +EDM    END+QK+ D  IK ID  F  K+KEI+  
Sbjct: 130 SIRNARRDAIDSIKKSVKDG-VAEDMAKDAENDMQKLHDKYIKKIDDVFALKEKEILTV 187


>gi|309811476|ref|ZP_07705258.1| ribosome recycling factor [Dermacoccus sp. Ellin185]
 gi|308434527|gb|EFP58377.1| ribosome recycling factor [Dermacoccus sp. Ellin185]
          Length = 186

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 101/180 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K+D  ++RTGR + +M + + V+ YG+  PL Q+A+    E R +
Sbjct: 7   LLEAEEKMDKAIEATKEDFASIRTGRANAAMFNRLTVDYYGAPTPLQQLASFQTPEARTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  ++ +E+ + +S+LG+NP  +G  +R  +P  TEERR   +K+A   AE  +
Sbjct: 67  LIIPFDKSAISEIEKTLRDSDLGVNPSNDGNQIRCILPALTEERRKDYIKMAKDKAENGR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN+RR     + K  K  +  ED  A  E D+  +T   +  +D+  + K+ E++  
Sbjct: 127 VSVRNVRRKANQDIDKLVKDKEVGEDDGARAEKDLDAMTKKRVDTVDALLKGKEAELLEV 186


>gi|326563741|gb|EGE13992.1| ribosome recycling factor [Moraxella catarrhalis 46P47B1]
          Length = 184

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 76/178 (42%), Positives = 111/178 (62%), Gaps = 1/178 (0%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + + RM  +I  L+     LRTGR  P +L  V V  YGS  PLNQVA++ V + R L+V
Sbjct: 8   DGESRMQKSIEALEAAFSKLRTGRAHPGILSGVMVSYYGSDTPLNQVASINVEDSRTLLV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +++ MV +V++ I E++LGLNP+    V+R+P+P  TEE R  + K+A   AE+++IS
Sbjct: 68  QPFERSMVQAVDKAIREADLGLNPMTA-DVIRVPMPALTEETRRDMQKIARNDAEQTRIS 126

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIRRD +  +K   K  + SED    + +DIQK+TD  I  IDS  E+K+ E+M  
Sbjct: 127 VRNIRRDMLSDIKDLLKDKEISEDDERRVADDIQKLTDKFIATIDSRLEKKESELMEV 184


>gi|169333879|ref|ZP_02861072.1| hypothetical protein ANASTE_00265 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259444|gb|EDS73410.1| hypothetical protein ANASTE_00265 [Anaerofustis stercorihominis DSM
           17244]
          Length = 185

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 66/165 (40%), Positives = 107/165 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              K++M   +  L+ ++  LR GR +P MLD + V+ YG+  P+NQ+A+++  EPR L 
Sbjct: 7   NQAKEKMIKAVENLQSNLNALRAGRANPKMLDRIMVDYYGTPTPVNQMASISAPEPRTLT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WD+  +  +E+ I  S+LGLNP  +G+V+R+ +P+ TEERR  LVK+A    E +K+
Sbjct: 67  VQPWDQSALGLIEKAIMSSDLGLNPSNDGKVIRLVIPQLTEERRKELVKLAQKEGENAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
           +VRNIRR  +  LK  +K G+ +ED +   E+++QK+T+  IK +
Sbjct: 127 AVRNIRRHTIQTLKDEQKKGELTEDSLKDAEDEMQKLTNDYIKEV 171


>gi|238854749|ref|ZP_04645079.1| ribosome recycling factor [Lactobacillus jensenii 269-3]
 gi|260663981|ref|ZP_05864834.1| ribosome recycling factor [Lactobacillus jensenii SJ-7A-US]
 gi|282932860|ref|ZP_06338257.1| ribosome recycling factor [Lactobacillus jensenii 208-1]
 gi|313472270|ref|ZP_07812762.1| ribosome recycling factor [Lactobacillus jensenii 1153]
 gi|238832539|gb|EEQ24846.1| ribosome recycling factor [Lactobacillus jensenii 269-3]
 gi|239529668|gb|EEQ68669.1| ribosome recycling factor [Lactobacillus jensenii 1153]
 gi|260561867|gb|EEX27836.1| ribosome recycling factor [Lactobacillus jensenii SJ-7A-US]
 gi|281302895|gb|EFA95100.1| ribosome recycling factor [Lactobacillus jensenii 208-1]
          Length = 185

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 70/177 (39%), Positives = 114/177 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K+ M  +I+  +K++  +R G  + S+L+ VKV+ YG   PL Q+++VT+ E R+L
Sbjct: 6   IAKAKENMNKSIAVYQKELGNIRAGVANASLLEGVKVDYYGVPTPLTQMSSVTIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  + ++E  +  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++K
Sbjct: 66  LVTPYDKSSLDNIEHALLASDLGLTPANDGNVIRLVIPQLTGERREEIAKQVGKQAEQAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I++RN+RR+ MD LKK  K+G  +ED    LE D+QK+TD   K +D   +EK+KEI
Sbjct: 126 IAIRNVRREAMDSLKKQEKNGDITEDEQKRLEKDVQKVTDDATKRVDQLADEKRKEI 182


>gi|104774221|ref|YP_619201.1| ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123077247|sp|Q1G9N9|RRF_LACDA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|103423302|emb|CAI98143.1| Ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|325126006|gb|ADY85336.1| Ribosome recycling factor [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 185

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 110/179 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K  M  +I   + ++ T+R G  + S+LD V VE YG   PL Q+A +T+ EPR+L
Sbjct: 6   IAKAKRNMNKSIEVYQSNLATVRAGVANASLLDRVMVEYYGVPTPLVQMAGITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E  I  S+LGL P  +G V+R+ +P+ T ERR  + K     AE++K
Sbjct: 66  MITPYDKTSLNDIEHAILASDLGLTPANDGNVIRLIIPQLTGERRQEIAKEVGKLAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+R++ M  LKK  K G+ +ED    LE ++QK+TD + K ID   + K+KEI+ 
Sbjct: 126 IAVRNVRQEAMKALKKQEKDGEITEDEERRLEKEVQKVTDESTKKIDQMADNKRKEIIQ 184


>gi|326776287|ref|ZP_08235552.1| Ribosome-recycling factor [Streptomyces cf. griseus XylebKG-1]
 gi|326656620|gb|EGE41466.1| Ribosome-recycling factor [Streptomyces cf. griseus XylebKG-1]
          Length = 185

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 61/174 (35%), Positives = 103/174 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V E RM VV+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEARMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R+I
Sbjct: 72  KSALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEYIKVAKTKAEDSKISIRSI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   + L K  K  ++ ED V   E ++   T   +  +D   + K+ E++  
Sbjct: 132 RRKAKETLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|56459950|ref|YP_155231.1| ribosome recycling factor [Idiomarina loihiensis L2TR]
 gi|60390231|sp|Q5QXS3|RRF_IDILO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|56178960|gb|AAV81682.1| Ribosome recycling factor [Idiomarina loihiensis L2TR]
          Length = 185

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ KDRM  ++  L+  M  +RTGR  PS+LD V V  YG+  PL Q+AN+T  + R L
Sbjct: 6   IEDAKDRMEKSVESLRSQMSKVRTGRAHPSILDSVMVNYYGTDTPLKQLANITTEDSRTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++V+DK   A+VE+ I  S+LGLNP   G V+RIP+P  TEERR  LVK+  A AE  +
Sbjct: 66  ALTVFDKSASAAVEKAIINSDLGLNPASAGAVIRIPLPPLTEERRRDLVKIVRAEAENGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD    +K   K  + +ED   + E +IQK+TD  +K ID   + K+ ++M  
Sbjct: 126 IAVRNIRRDANGDIKDLLKEKEITEDEERNAEEEIQKLTDKFVKQIDEALKAKEADLMEI 185


>gi|78185216|ref|YP_377651.1| ribosome recycling factor [Synechococcus sp. CC9902]
 gi|123580806|sp|Q3AV97|RRF_SYNS9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78169510|gb|ABB26607.1| ribosome recycling factor [Synechococcus sp. CC9902]
          Length = 182

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/179 (33%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   KDLEASMRKSLEATQRNFNTIRTGRANSSLLDRISVEYYGADTPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +A++E+ I  S LG  P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISGLAAIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKMASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +D +KK  K G  SED     ++ +QK+ D  I  ++    +K+  I+  
Sbjct: 124 ALRNLRRDAIDKVKKQEKDGDFSEDQSRDEQDSVQKVLDKFIVELEKQLADKEAAILKV 182


>gi|205356536|ref|ZP_03223299.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345541|gb|EDZ32181.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 187

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 4   LNEIFNKQKTQS--EKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 61

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 62  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 121

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 122 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKSKE 181

Query: 181 KEIMHF 186
            E++  
Sbjct: 182 SELLKV 187


>gi|57237294|ref|YP_178307.1| ribosome recycling factor [Campylobacter jejuni RM1221]
 gi|86151424|ref|ZP_01069639.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|62900783|sp|Q5HWM8|RRF_CAMJR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|57166098|gb|AAW34877.1| ribosome recycling factor [Campylobacter jejuni RM1221]
 gi|85841771|gb|EAQ59018.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315057664|gb|ADT71993.1| Ribosome recycling factor [Campylobacter jejuni subsp. jejuni S3]
          Length = 185

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQKTQS--EKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKNKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 SELLKV 185


>gi|291456894|ref|ZP_06596284.1| ribosome recycling factor [Bifidobacterium breve DSM 20213]
 gi|291382171|gb|EFE89689.1| ribosome recycling factor [Bifidobacterium breve DSM 20213]
          Length = 183

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K++M  T+   K++   +RTGR +P++L+ + V+ YG+  P+  VA++ V EPR L
Sbjct: 4   IDQAKEQMAKTVENTKENFAGIRTGRANPALLNGIVVDYYGAPTPIKAVASIGVPEPRTL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D    A+VE+ I  S+LG++P  +G V+R+ +PE TE+RR   VK+A + AE  K
Sbjct: 64  SVTPFDASQAAAVEKAIRNSDLGVSPNRDGNVIRLTMPELTEDRRKEYVKLAKSKAEDGK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + + KS K G   ED    L  D+ K+T S    ID+  + K+KEIM  
Sbjct: 124 VAVRNIRRKTKETIDKSVKDGDMGEDEGDRLLKDLDKVTKSVTDEIDALLDTKQKEIMEV 183


>gi|239944636|ref|ZP_04696573.1| ribosome recycling factor [Streptomyces roseosporus NRRL 15998]
 gi|239991100|ref|ZP_04711764.1| ribosome recycling factor [Streptomyces roseosporus NRRL 11379]
          Length = 186

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 62/174 (35%), Positives = 105/174 (60%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 13  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 72

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R+I
Sbjct: 73  KTALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEYIKVAKTKAEDSKISIRSI 132

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   ++L K  K  ++ ED V   E ++   T   +  +D   + K+ E++  
Sbjct: 133 RRKAKENLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 186


>gi|150016075|ref|YP_001308329.1| ribosome recycling factor [Clostridium beijerinckii NCIMB 8052]
 gi|189044050|sp|A6LSP3|RRF_CLOB8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149902540|gb|ABR33373.1| ribosome recycling factor [Clostridium beijerinckii NCIMB 8052]
          Length = 185

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +QN +++M  TIS LK D+ T++ GR +P+MLD + VE YGS  PL+QVANV+  EPR+L
Sbjct: 6   IQNAEEKMKKTISVLKSDLSTMKAGRANPTMLDRIHVEYYGSMCPLSQVANVSAPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K ++  +E+ I +S+LGLNP  +G ++R+ +PE TEE R  LVK      E++K
Sbjct: 66  MITPWEKPLLKEIEKAILKSDLGLNPSSDGSIIRLVIPELTEETRKTLVKNVKKTGEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IR+   D +K  +K    SED V   E+++QK TD+ +K IDS    K+KE++  
Sbjct: 126 VAIRSIRKTANDKIKALKKDEDLSEDQVKKAEDEVQKKTDAVVKEIDSIIAAKEKEVLSV 185


>gi|55820525|ref|YP_138967.1| ribosome recycling factor [Streptococcus thermophilus LMG 18311]
 gi|55822414|ref|YP_140855.1| ribosome recycling factor [Streptococcus thermophilus CNRZ1066]
 gi|62900786|sp|Q5M140|RRF_STRT1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|62900787|sp|Q5M5M9|RRF_STRT2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|55736510|gb|AAV60152.1| ribosome recycling factor [Streptococcus thermophilus LMG 18311]
 gi|55738399|gb|AAV62040.1| ribosome recycling factor [Streptococcus thermophilus CNRZ1066]
          Length = 185

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   T   L ++   +R GR + S+LD + VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFAHTHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K  + +ED + +LE DIQK TD  +  IDS   EK+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKEKEITEDQLKTLEKDIQKATDDAVNKIDSMIAEKEKELLTV 185


>gi|123968112|ref|YP_001008970.1| ribosome recycling factor [Prochlorococcus marinus str. AS9601]
 gi|166230817|sp|A2BQ02|RRF_PROMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123198222|gb|ABM69863.1| Ribosome recycling factor [Prochlorococcus marinus str. AS9601]
          Length = 182

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + I++ M  +I   +++  T+RTGR + S+LD V VE YG+  P+  +A ++ ++ + + 
Sbjct: 4   KEIQENMNKSIEATQRNFNTIRTGRANASLLDRVSVEYYGAETPIKSLATISTVDSQTIS 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D  KK  K G  S D     +++IQKITD  I  I++   EK+KEI+  
Sbjct: 124 ALRNIRRDAVDKEKKDEKDGLISIDESRDNQSEIQKITDKYIALIETKLSEKEKEILKV 182


>gi|325067054|ref|ZP_08125727.1| ribosome recycling factor [Actinomyces oris K20]
 gi|326771757|ref|ZP_08231042.1| ribosome recycling factor [Actinomyces viscosus C505]
 gi|326637890|gb|EGE38791.1| ribosome recycling factor [Actinomyces viscosus C505]
          Length = 185

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   +D+M   +   K ++ T+RTGR +PSM + + V+ YG+  PL Q+A++T+ E R +
Sbjct: 6   MLEAEDKMDKALQAAKSELATIRTGRANPSMFNGIVVDYYGAPTPLQQLASLTIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +D+  +  +   I ES+LG+NP  +G V+R+ +P  TEERR   VK+A + AE S+
Sbjct: 66  LVSPFDRSAMKDIVTAIRESDLGVNPTDDGTVIRVTLPALTEERRKDYVKLARSRAEDSR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VR IR      L+  +K G+A ED V   E+++  +T   ++ ID+    K+ E++  
Sbjct: 126 VQVRGIRGKAKKELEAIKKDGEAGEDDVKRAEHELDGLTKRFVEQIDAALSAKEAELLEV 185


>gi|307747174|gb|ADN90444.1| Ribosome-recycling factor [Campylobacter jejuni subsp. jejuni M1]
          Length = 187

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 4   LNEIFNKQKTQS--EKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLA 61

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 62  SDASTINITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 121

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 122 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKSKE 181

Query: 181 KEIMHF 186
            E++  
Sbjct: 182 SELLKV 187


>gi|116627334|ref|YP_819953.1| ribosome recycling factor [Streptococcus thermophilus LMD-9]
 gi|122268064|sp|Q03M15|RRF_STRTD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116100611|gb|ABJ65757.1| ribosome recycling factor [Streptococcus thermophilus LMD-9]
 gi|312277842|gb|ADQ62499.1| Ribosome recycling factor [Streptococcus thermophilus ND03]
          Length = 185

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K+R   T   L ++   +R GR + S+LD + VE YG+  PLNQ+A++TV E R+L
Sbjct: 6   IEKAKERFAHTHESLAREFGAIRAGRANASLLDRITVEYYGAPTPLNQLASITVPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +DK  +A +ER I+ES+LG+NP  +G V+R+ +P  TEE R  L K      E +K
Sbjct: 66  LISPFDKGSIADIERAINESDLGINPANDGSVIRLVIPALTEETRKELAKEVKKVGENAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD MD  KK  K  + +ED + +LE DIQK TD  +  IDS   EK+KE++  
Sbjct: 126 IAIRNIRRDAMDEAKKQEKEKEITEDQLKTLEKDIQKATDDAVNKIDSMIAEKEKELLTV 185


>gi|291448100|ref|ZP_06587490.1| ribosome recycling factor [Streptomyces roseosporus NRRL 15998]
 gi|291351047|gb|EFE77951.1| ribosome recycling factor [Streptomyces roseosporus NRRL 15998]
          Length = 185

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 62/174 (35%), Positives = 105/174 (60%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+ +V EPRM VV+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGALTPINQLASFSVPEPRMAVVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           K  + ++E+ I +S+LG+NP  +G ++R+  PE T++RR   +KVA   AE SKIS+R+I
Sbjct: 72  KTALRNIEQAIRDSDLGVNPSNDGNIIRVTFPELTQDRRKEYIKVAKTKAEDSKISIRSI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   ++L K  K  ++ ED V   E ++   T   +  +D   + K+ E++  
Sbjct: 132 RRKAKENLDKLVKDKESGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|34397824|gb|AAQ66885.1| ribosome recycling factor [Porphyromonas gingivalis W83]
          Length = 173

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 68/173 (39%), Positives = 106/173 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   + +L + +  +R G+ SP +LD + V  YG+  PL QVA++   + + +VV+ W++
Sbjct: 1   MEKAVEYLDEQLSHVRAGKASPKLLDGIMVMYYGNATPLTQVASINTPDAKTIVVTPWER 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +E+ I +S LG+ P   G+++R+ +P  TEERR  LVK     AE +K+SVRN R
Sbjct: 61  SLIKDIEKAIMDSPLGITPENNGELIRLGLPPLTEERRRQLVKQTKGDAEDAKVSVRNAR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD +D +KKS K+    ED+    E ++QK+ D  IK ID  F EK+KEIM  
Sbjct: 121 RDAIDAIKKSVKTDGTPEDVAKDAEAEMQKVHDRYIKKIDELFAEKEKEIMTV 173


>gi|228473766|ref|ZP_04058511.1| ribosome recycling factor [Capnocytophaga gingivalis ATCC 33624]
 gi|228274787|gb|EEK13610.1| ribosome recycling factor [Capnocytophaga gingivalis ATCC 33624]
          Length = 184

 Score =  222 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 75/188 (39%), Positives = 117/188 (62%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ ID  L++ K+ M  +++ L+K ++ +R G+ SP ML  V V+ YGS  PL+QVANV
Sbjct: 1   MNEEIDFILESTKEAMQGSLNHLEKSLLNIRAGKASPQMLGSVYVDYYGSQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + +  W+K M++++E+ I  +NLG NP+  G+ + I VP  TEERR  LVK A
Sbjct: 61  NTPDSRTISIQPWEKNMLSTIEKAIMVANLGFNPMNNGETIIISVPPLTEERRKELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              +E++KI VRN R++    +KK+    +AS+D+    E  +QK+TD  IK ID    +
Sbjct: 121 KGESEEAKIGVRNARQEANKDIKKT----EASDDVKKDAEERVQKLTDKYIKQIDEVLAK 176

Query: 179 KKKEIMHF 186
           K+ EI+  
Sbjct: 177 KEAEILKV 184


>gi|312892397|ref|ZP_07751892.1| ribosome recycling factor [Mucilaginibacter paludis DSM 18603]
 gi|311295181|gb|EFQ72355.1| ribosome recycling factor [Mucilaginibacter paludis DSM 18603]
          Length = 187

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 79/188 (42%), Positives = 112/188 (59%), Gaps = 3/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M+++I   L + K  M   I     + + +R G+ SP+MLD V VE YG+   + QVA+V
Sbjct: 1   MSELIKKQLTDAKALMEKAIEHTDSEFLKIRAGKASPAMLDGVMVEYYGTPTIITQVASV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R LVV  W+K ++  +ER I E+NLG NP  +G V+RI VP  TEERR  LVK  
Sbjct: 61  NSPDARTLVVQPWEKTLLGPIERAIMEANLGFNPQNDGIVIRINVPPLTEERRRDLVKRV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE  KI++RNIR+D  + +KK  K+   SED +   E D+QK+ D+ I  ID   + 
Sbjct: 121 KAEAENGKIALRNIRKDANEKIKKL-KTESVSEDEIKVGEADVQKLVDAYIIKIDQLTDV 179

Query: 179 KKKEIMHF 186
           K+K+IM  
Sbjct: 180 KEKDIMTV 187


>gi|269219617|ref|ZP_06163471.1| ribosome recycling factor [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269210859|gb|EEZ77199.1| ribosome recycling factor [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 185

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 57/180 (31%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  T+   + +   +R+GR + +M + + V+ YG+  PL Q+  + + E R +
Sbjct: 6   LLEAEEKMEKTVEVARNEFSGIRSGRANAAMFNAILVDYYGAPTPLQQLGTIAIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +AS+++ + ES+LG+NP  +G ++R+ +P  TEERR   VK+A   AE+++
Sbjct: 66  LITPFDRSAMASIDKALRESDLGVNPTDDGNLIRVVLPALTEERRRDYVKLARNKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRR   + L K +K G+A ED V   E  +  +T   ++ +D   E K+KE++  
Sbjct: 126 VAVRGIRRKAKEALDKIKKDGEAGEDDVKRAEEKLDGLTKRHVEQVDKVLEGKEKELLEV 185


>gi|157412937|ref|YP_001483803.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9215]
 gi|166991558|sp|A8G3N6|RRF_PROM2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157387512|gb|ABV50217.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9215]
          Length = 182

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + I++ M  +I   +++  T+RTGR + S+LD V V+ YG+  P+  +A ++ ++ + + 
Sbjct: 4   KEIQENMNKSIEATQRNFNTIRTGRANASLLDRVSVDYYGAETPIKSLATISTIDSQTIS 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D  KK  K G  S D     +++IQKITD  I  I++   EK+KEI+  
Sbjct: 124 ALRNIRRDAVDKEKKDEKDGLISIDESRDNQSEIQKITDKYIALIETKLSEKEKEILKV 182


>gi|223937597|ref|ZP_03629500.1| ribosome recycling factor [bacterium Ellin514]
 gi|223893760|gb|EEF60218.1| ribosome recycling factor [bacterium Ellin514]
          Length = 186

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 117/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  T   ++ +   +RTG+ SPS+++ + VE YGS + + ++A +T  EPRML
Sbjct: 7   LLETEEKMIKTEEVVQHEFSGVRTGKASPSLVENILVEVYGSQMRIRELAGITTPEPRML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD   V  +E+ I +SNLGLNP V+ + +RI +P+ ++ERR   +KV    AE  +
Sbjct: 67  LIQPWDAGTVHPIEKAIQKSNLGLNPAVDKKFIRIVLPDLSQERRQEFIKVVKKMAEDGR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R++RRDGM+ LKK  K+G  +ED+V   E +IQK+TDS I  ID    +K+KEI+  
Sbjct: 127 VAIRHVRRDGMEALKKEEKAGGVTEDLVEGAEKEIQKLTDSYIAKIDGHLAQKEKEILTV 186


>gi|220927898|ref|YP_002504807.1| ribosome recycling factor [Clostridium cellulolyticum H10]
 gi|219998226|gb|ACL74827.1| ribosome recycling factor [Clostridium cellulolyticum H10]
          Length = 185

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + I+++M  TI+ L+ ++  +R GR +P++LD + ++ YG+  P+ QVA V++ E R+++
Sbjct: 7   KPIEEKMKKTINVLRDNLAGIRAGRANPAILDKLTIDYYGAPTPIQQVATVSIPEARVIL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  W+ +++  +E+ I +S++G+NP  +G+VLR+  P  TEERR  L K A    E+SKI
Sbjct: 67  IQPWEAKLLKDIEKEIQKSDIGINPNNDGKVLRLVFPALTEERRRELTKQAKKEGEESKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++R+IRRD ++ +K  +KSG+ +ED +   E DIQ ITD  I  ID   E K KEIM  
Sbjct: 127 AIRSIRRDSIETMKAKKKSGEITEDDLKDAEKDIQNITDRYIAEIDRVIEAKDKEIMEV 185


>gi|260060696|ref|YP_003193776.1| ribosome recycling factor [Robiginitalea biformata HTCC2501]
 gi|88784826|gb|EAR15995.1| ribosome recycling factor [Robiginitalea biformata HTCC2501]
          Length = 184

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 78/188 (41%), Positives = 115/188 (61%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I   L + K+ M + IS L+K+++ +R GR SPSML  V V+ YGS  PLNQ++NV
Sbjct: 1   MNEDIQFILDSAKENMDNAISHLEKELVKIRAGRASPSMLSSVMVDYYGSQTPLNQMSNV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + V  W+K M+ ++E  I  +NLG NP+  G+++ I VP  TEERR  LVK A
Sbjct: 61  NTPDARTISVQPWEKAMIPNIETAITNANLGFNPMNNGEMVIINVPPLTEERRKQLVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE++K+S+R  R+D    +K        SED+  + E DIQ++TD+  + +D   E 
Sbjct: 121 KAEAEEAKVSIRAARQDANKEIKAL----DISEDLEQNAEIDIQELTDTYTERVDGILEH 176

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 177 KEAEIMKV 184


>gi|311748532|ref|ZP_07722317.1| ribosome recycling factor [Algoriphagus sp. PR1]
 gi|126577048|gb|EAZ81296.1| ribosome recycling factor [Algoriphagus sp. PR1]
          Length = 186

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 2/187 (1%)

Query: 1   MNQV-IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M ++ + L   K+ M   +     +++ +R G+  P++LD + V+ YG+  PLNQVA+V+
Sbjct: 1   MEEIELFLDEAKELMQKAVDHTAAELLKIRAGKAMPNLLDGIMVQYYGAPTPLNQVASVS 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R L +  W+K ++  +E+ I  S+LGL P   G+++ + +P  TEERR+ LVK A 
Sbjct: 61  TPDARTLSIKPWEKGLIPDIEKAIINSDLGLAPQNNGELVILTIPALTEERRINLVKQAK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E  KISVR +R+D  D LKK +K G ASED V   E+ +QK+TD     +D   E+K
Sbjct: 121 HECENGKISVRTVRKDTNDSLKKLQKDG-ASEDEVKRAEDVVQKLTDQYSSKLDDLLEKK 179

Query: 180 KKEIMHF 186
           + +IM  
Sbjct: 180 EADIMKV 186


>gi|302537209|ref|ZP_07289551.1| ribosome recycling factor [Streptomyces sp. C]
 gi|302446104|gb|EFL17920.1| ribosome recycling factor [Streptomyces sp. C]
          Length = 185

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 59/174 (33%), Positives = 103/174 (59%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+  V EPRM +V+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAITPINQLASFAVPEPRMAIVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              + ++E+ I +S+LG+NP  +G+++R+  PE T++RR   +KVA   AE S++S+R++
Sbjct: 72  ASALRNIEQAIRDSDLGVNPSNDGRIIRVTFPELTQDRRKEFIKVAKTKAEDSRVSIRSV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   D L K  K  +A ED V   E ++   T   +  +D   + K+ E++  
Sbjct: 132 RRKAKDALDKLVKDKEAGEDEVRRAEKELDDTTAKYVAQVDELLKHKESELLEV 185


>gi|308234682|ref|ZP_07665419.1| ribosome recycling factor [Gardnerella vaginalis ATCC 14018]
 gi|311114694|ref|YP_003985915.1| ribosome recycling factor [Gardnerella vaginalis ATCC 14019]
 gi|310946188|gb|ADP38892.1| ribosome recycling factor [Gardnerella vaginalis ATCC 14019]
          Length = 184

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 116/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  +ID     ++M  ++   K++ M +RTGR +P++L+ + V+ YG+  P+  VA++ V
Sbjct: 1   MPAIID--QALEQMNKSVEATKENFMGIRTGRANPALLNGIMVDYYGAPTPIKAVASIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ I +S+LG++P  +G V+R+ +PE TE+RR   VK+A  
Sbjct: 59  PEPRTLSVTPFDASQANAVEKAIRDSDLGVSPNRDGNVIRVTMPELTEDRRKEYVKLAKT 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ K++VRNIRR   +++ KS K G+  ED    L+ ++ K+T     ++D+  + K+
Sbjct: 119 KAEEGKVAVRNIRRKTKENIDKSVKDGEIGEDEGERLQKELDKVTKQVTDSLDALLDGKQ 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEV 184


>gi|224438526|ref|ZP_03659446.1| ribosome recycling factor [Helicobacter cinaedi CCUG 18818]
 gi|313144953|ref|ZP_07807146.1| ribosome recycling factor [Helicobacter cinaedi CCUG 18818]
 gi|313129984|gb|EFR47601.1| ribosome recycling factor [Helicobacter cinaedi CCUG 18818]
          Length = 185

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 63/186 (33%), Positives = 113/186 (60%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N + +  N K  M  TI  L++D  TLR+G+VS S+LD ++++ YG+  PLNQV +V  
Sbjct: 2   LNDIYN--NAKSHMEKTIESLRRDFSTLRSGKVSISILDNIRIDYYGTPTPLNQVGSVIA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   ++++ W+K ++  +E+ I E+N+G+NP  + + +++  P  T+E+R  + K A +
Sbjct: 60  QDATTIIITPWEKPLLKDIEKAIQEANIGVNPNSDSECVKLFFPPMTQEQRKEIAKQAKS 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+++RNIR+D  + +KK  K    +ED      ++IQK TD  +K  D     K+
Sbjct: 120 MGEKAKVAIRNIRQDSNNGIKKLEKDKDITEDEGKKGLDEIQKYTDEFVKKCDDMVRHKE 179

Query: 181 KEIMHF 186
           +E+M  
Sbjct: 180 EEVMKV 185


>gi|291278553|ref|YP_003495388.1| ribosome recycling factor Frr [Deferribacter desulfuricans SSM1]
 gi|290753255|dbj|BAI79632.1| ribosome recycling factor Frr [Deferribacter desulfuricans SSM1]
          Length = 185

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 66/186 (35%), Positives = 117/186 (62%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   + +K +M  ++++ K+++  +RTGR S ++ + +KV+ YG+  P+ QVA + V
Sbjct: 2   INEIF--EEVKSKMEKSVAYYKEELKGVRTGRASAALFENIKVDYYGTPTPIPQVATIQV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +PR++ +  W+  MV  +E+ I  S +G NP  +G+++R+P+P  TEERR  L+K+ + 
Sbjct: 60  PDPRLVTIQPWEPNMVPVIEKAIMNSGMGFNPSNDGKMIRVPIPPLTEERRKELMKLVNK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++++ +RN RR G D +KK  K  + SED        IQ++T+  IK ID    +K+
Sbjct: 120 MAEEARVVIRNERRYGNDKIKKLEKEKEISEDEAKKALEKIQELTNEYIKKIDEITAKKE 179

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 180 KEIMEL 185


>gi|302874652|ref|YP_003843285.1| ribosome recycling factor [Clostridium cellulovorans 743B]
 gi|307690735|ref|ZP_07633181.1| ribosome recycling factor [Clostridium cellulovorans 743B]
 gi|302577509|gb|ADL51521.1| ribosome recycling factor [Clostridium cellulovorans 743B]
          Length = 185

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 123/180 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + N +++M  T++ LKKD+ TL+ G+ +P+MLD ++VE YG+  P+NQVAN++  EPR+L
Sbjct: 6   ISNAEEKMKKTVTVLKKDLNTLKAGKANPTMLDRIEVEYYGTMTPINQVANISAPEPRIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  + ++E+ I  S+LG+NP  +G V+R+ VPE TEE R  + K    + E +K
Sbjct: 66  LIQPWDKGSLKAIEKAILISDLGINPNSDGNVIRLIVPELTEETRRDITKKVKKFGEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR+IRRD  D +K  +K    +ED + S E+++QK TD+ +K IDS   +K+KE+M  
Sbjct: 126 VAVRSIRRDANDKIKNLKKENTITEDEMKSAEDNVQKKTDAFVKEIDSIISDKEKEVMSL 185


>gi|157825336|ref|YP_001493056.1| ribosome recycling factor [Rickettsia akari str. Hartford]
 gi|166231216|sp|A8GMC3|RRF_RICAH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157799294|gb|ABV74548.1| ribosome releasing factor [Rickettsia akari str. Hartford]
          Length = 186

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 81/177 (45%), Positives = 120/177 (67%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++++M   +  L  ++  LRTGR S ++LD V VEAYGS + L+QVA+++  + R + V 
Sbjct: 10  LQEKMDKALKVLDHELKGLRTGRASVNLLDSVTVEAYGSKMLLSQVASLSTPDARTINVQ 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           VWDK MV+SVE+GI  +NLGL P  +GQ++R+P+P  TEERR  LVK+AH Y E +KIS+
Sbjct: 70  VWDKSMVSSVEKGITIANLGLTPATDGQLIRLPIPALTEERRKELVKLAHKYGEDAKISL 129

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIRRDG + LKK  K    ++D   +L   +QK+TD     +DS  ++K+++IM  
Sbjct: 130 RNIRRDGNEELKKLEKDNIIAKDEHHNLSEQVQKLTDEYSSKVDSAIKQKEQDIMTV 186


>gi|126695885|ref|YP_001090771.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9301]
 gi|126542928|gb|ABO17170.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9301]
          Length = 173

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 67/173 (38%), Positives = 107/173 (61%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +I   +++  T+RTGR + S+LD V VE YG+  P+  +A ++ ++ + + +  +D 
Sbjct: 1   MNKSIEATQRNFNTIRTGRANASLLDRVSVEYYGAETPIKSLATISTVDSQTISIQPFDI 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+++RNIR
Sbjct: 61  SCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKVALRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD +D  KK  K G  S D     +++IQKITD  I  I++   EK+KEI+  
Sbjct: 121 RDAVDKEKKDEKDGLISIDESRDNQSEIQKITDKYIALIETKLSEKEKEILKV 173


>gi|28210950|ref|NP_781894.1| ribosome recycling factor [Clostridium tetani E88]
 gi|34924948|sp|Q895K9|RRF_CLOTE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|28203389|gb|AAO35831.1| ribosome recycling factor [Clostridium tetani E88]
          Length = 183

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 117/180 (65%), Gaps = 2/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   +D+M   +  LKKD+ +L+ GR +P+MLD ++ E YG+  PL+Q+AN++V E R+L
Sbjct: 6   MNTAEDKMSKALLALKKDLASLKAGRANPAMLDKIEAEYYGTMTPLSQLANISVPEARIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  + ++E+ I  S+LGLNP  +G ++R+ +PE TEE R  +VK    Y E +K
Sbjct: 66  QIQPWDKSSLKAIEKAILVSDLGLNPNNDGTIIRLIIPELTEETRRNIVKTVKKYGEDTK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++R++RRDG D +K  +     SED +   E +IQKITD+ +K +D   + K+KEIM  
Sbjct: 126 IAIRSVRRDGNDKIKDLKSD--MSEDDIKKAEEEIQKITDNYVKKVDEMIDIKEKEIMSI 183


>gi|208780540|ref|ZP_03247879.1| ribosome recycling factor [Francisella novicida FTG]
 gi|208743515|gb|EDZ89820.1| ribosome recycling factor [Francisella novicida FTG]
          Length = 185

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  ++  L  D+  +RTGR  P +L  V ++ YG    + Q AN+TVL+ R L
Sbjct: 6   LKDAENRMKKSLEVLADDLAKIRTGRAHPDLLAHVTIDYYGVETTITQAANITVLDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K + + +E+ I  S+LGLNP   G  LR+P+P   EERR  LVK+  +  E  +
Sbjct: 66  GITPWEKGLSSKIEKAILTSDLGLNPTNLGDSLRVPMPALNEERRKELVKLVKSETEAGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRRD    +K+  K  + +ED     E+DIQKITD  I   D+   +K++++M  
Sbjct: 126 VSIRNIRRDANGDIKELLKEKEITEDQAKKAEDDIQKITDKMIAQADALAAKKEQDLMAV 185


>gi|229829209|ref|ZP_04455278.1| hypothetical protein GCWU000342_01296 [Shuttleworthia satelles DSM
           14600]
 gi|229792372|gb|EEP28486.1| hypothetical protein GCWU000342_01296 [Shuttleworthia satelles DSM
           14600]
          Length = 189

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 70/178 (39%), Positives = 117/178 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  +++ L  + +++R GR +P +LD ++VE YG+  PL QVANV+V E RM+
Sbjct: 10  LNPYEEKMKKSVNALLAEYVSIRAGRANPHILDKIEVEYYGAPTPLQQVANVSVPEARMI 69

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+  ++  +E+ I+ S++G++P  +G+ +R+  PE TE+RR  LVK      E +K
Sbjct: 70  QIQPWESSLLKEIEKAINMSDVGIHPTNDGKTIRLVFPELTEDRRKELVKDVKKKGENAK 129

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++RNIRRD MD  KK +KS   SED +A LE+  QK+TD  +K +D   ++K +E+M
Sbjct: 130 VAIRNIRRDAMDEFKKLKKSEDMSEDAIADLEDQAQKLTDRYVKILDQEIDKKTQELM 187


>gi|228470918|ref|ZP_04055763.1| ribosome recycling factor [Porphyromonas uenonis 60-3]
 gi|228307315|gb|EEK16329.1| ribosome recycling factor [Porphyromonas uenonis 60-3]
          Length = 186

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +  M   I FL+  +  +R G+ +P +LD + VEAYG+ +PLNQVA VTV + R L
Sbjct: 7   IKPAEQSMLKAIEFLQDKLDRIRAGKANPVLLDDITVEAYGAPMPLNQVATVTVPDARTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ WDK+++  +E+GI +S+LG+ P   G+++RI +P  TEERR  LVK + A +E++K
Sbjct: 67  AITPWDKKLIKDIEKGILDSSLGITPTNNGEMIRITMPPLTEERRKELVKQSKAESEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RN RRD +D  KK+ K+    ED +   END QK+ D  I  ++     K+KEIM  
Sbjct: 127 ISIRNARRDAIDAAKKAVKAEDLPEDTIKQTENDAQKLHDKYIARVEEALAAKEKEIMTI 186


>gi|226954086|ref|ZP_03824550.1| ribosome releasing factor [Acinetobacter sp. ATCC 27244]
 gi|226835127|gb|EEH67510.1| ribosome releasing factor [Acinetobacter sp. ATCC 27244]
          Length = 184

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 109/179 (60%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  L+     +RTGR  PS+L+ V V  YGS VPLNQVAN+ + + R L+
Sbjct: 7   KDAEDRMNKSLDSLEHGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANIGLEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV+++++ I E+ LGLNPI     +R+P+   TEE R  + KVA   AE +K+
Sbjct: 67  VQPFERSMVSAIDKAIREAGLGLNPITA-DAIRVPMAALTEETRRDMQKVARNEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD +  +K   K  + SED      ++IQKITD  +  +D     K+ E+M  
Sbjct: 126 SIRNIRRDVLGDIKALLKEKEISEDDDRRASDEIQKITDKFVAEVDKRLAAKEAELMKV 184


>gi|256847041|ref|ZP_05552487.1| ribosome recycling factor [Lactobacillus coleohominis 101-4-CHN]
 gi|256715705|gb|EEU30680.1| ribosome recycling factor [Lactobacillus coleohominis 101-4-CHN]
          Length = 186

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 78/178 (43%), Positives = 122/178 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N K++M  +   LK+ +  +R GR + S+L+ VKV+ YG+  PLNQ+A++TV E R L
Sbjct: 7   LANAKEKMAKSGEALKRTLADIRAGRANASILNPVKVDYYGALTPLNQMASITVPEARQL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +DK  +  +ER I+E++LGL P  +G+ +RI +P+ TEERR  LVK   A  E +K
Sbjct: 67  LVSPYDKSTLKDIERAIYEADLGLTPQNDGEAIRIMIPQLTEERRKELVKDVKAELENAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN+RR+ MD LKK  K G  ++D   +LE+ +QK TD+ IKN+++  ++K+ E+M
Sbjct: 127 VAVRNVRREAMDDLKKGNKDGDFNDDEFHNLEDQVQKETDAGIKNLEAIAKDKEDELM 184


>gi|229815412|ref|ZP_04445744.1| hypothetical protein COLINT_02460 [Collinsella intestinalis DSM
           13280]
 gi|229808945|gb|EEP44715.1| hypothetical protein COLINT_02460 [Collinsella intestinalis DSM
           13280]
          Length = 177

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 103/180 (57%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + +I++ M   I  LK +   +RTGR + ++L  + V+ YG   P+ QVA + V E  ML
Sbjct: 1   MSDIRENMDKAIDSLKHNFAKVRTGRANANVLSDITVDYYGVATPITQVAAIKVPEAHML 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +V ++ + +  S+LG+ P  +G V+R+P P  TEERR  LVK     AE +K
Sbjct: 61  VIEPWDKALVNAIVKAVTASDLGITPNSDGIVVRLPFPAPTEERRRELVKECRDLAEHAK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  +   K  +  + +ED V   +  +QK TD  +  ++   + K+ E+M  
Sbjct: 121 IAIRNIRRDANN---KLERDEELTEDDVRREQAKVQKATDEYVARVEELLKAKEAEVMEI 177


>gi|330964144|gb|EGH64404.1| ribosome recycling factor [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 185

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 104/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  +  I+   ++K+ ++M  
Sbjct: 127 AVRNIRRDALSQLKDLVKDKEISEDEERRAADDVQKLTDKFVAEIEVAVKQKEADLMAV 185


>gi|294650307|ref|ZP_06727675.1| ribosome recycling factor [Acinetobacter haemolyticus ATCC 19194]
 gi|292823837|gb|EFF82672.1| ribosome recycling factor [Acinetobacter haemolyticus ATCC 19194]
          Length = 184

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 109/179 (60%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  L+     +RTGR  PS+L+ V V  YGS VPLNQVAN+ + + R L+
Sbjct: 7   KDAEDRMNKSLDSLEHGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANIGLEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV+++++ I E+ LGLNPI     +R+P+   TEE R  + KVA   AE +K+
Sbjct: 67  VQPFERSMVSAIDKAIREAGLGLNPITA-DAIRVPMAALTEETRRDMQKVARNEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K   K  + SED      ++IQKITD  +  +D     K+ E+M  
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDDDRRASDEIQKITDKFVAEVDKRLAAKEAELMKV 184


>gi|254526487|ref|ZP_05138539.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9202]
 gi|221537911|gb|EEE40364.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9202]
          Length = 182

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + I++ M  +I   +++  T+RTGR + S+LD V VE YG+  P+  +A ++ ++ + + 
Sbjct: 4   KEIQENMNKSIEATQRNFNTIRTGRANASLLDRVSVEYYGAETPIKSLATISTIDSQTIS 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D  KK  K G  S D     +++IQKITD  I  I++   EK+KEI+  
Sbjct: 124 ALRNIRRDAVDKEKKDEKDGLISIDESRDNQSEIQKITDKYIALIETKLSEKEKEILKV 182


>gi|188588017|ref|YP_001920606.1| ribosome recycling factor [Clostridium botulinum E3 str. Alaska
           E43]
 gi|251779568|ref|ZP_04822488.1| ribosome recycling factor [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|238689676|sp|B2V4F7|RRF_CLOBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|188498298|gb|ACD51434.1| ribosome recycling factor [Clostridium botulinum E3 str. Alaska
           E43]
 gi|243083883|gb|EES49773.1| ribosome recycling factor [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 185

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 125/180 (69%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++N +++M  T++ LK ++ T++ GR +PSMLD ++++ YGS  PL+Q AN++  EPR+L
Sbjct: 6   IKNAEEKMQKTVTVLKSELGTMKAGRANPSMLDKIQIDYYGSMCPLSQAANISSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K+++  +E+ I +S+LGLNP  +G ++R+ +PE TEE R  LVK      E+SK
Sbjct: 66  MITPWEKQLLKEIEKAILKSDLGLNPSNDGSIIRLVIPELTEETRKDLVKKVKKTGEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K G  SED V   E+D+QK TD+ IK ID    +K+KEI+  
Sbjct: 126 VAIRSIRRDANDKIKALKKDGDLSEDQVKKGEDDVQKKTDAIIKEIDKIIVDKEKEILAI 185


>gi|32265940|ref|NP_859972.1| ribosome recycling factor [Helicobacter hepaticus ATCC 51449]
 gi|39932102|sp|Q7VJ10|RRF_HELHP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|32261989|gb|AAP77038.1| ribosome releasing factor [Helicobacter hepaticus ATCC 51449]
          Length = 185

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 62/186 (33%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   +N K  M  +I  L++D  TLR+G+VS ++LD V+V+ YG+  PLNQV +V  
Sbjct: 2   LNEIF--KNAKSHMDKSIESLRRDFSTLRSGKVSVNILDNVRVDYYGTPTPLNQVGSVIA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   ++++ W+K ++  +E+ I E+N+G+NP  + + +++  P  T+E+R  + K A +
Sbjct: 60  QDATTIIITPWEKPLIKDIEKSIQEANIGVNPNSDSECVKLFFPPMTQEQRKEIAKNARS 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+++RNIR+D  + +KK  K    +ED       +IQ+ TD  +K  D   + K+
Sbjct: 120 MGEKAKVAIRNIRQDANNAIKKLEKDKSITEDENKKALEEIQRYTDEFVKKCDEMLKHKE 179

Query: 181 KEIMHF 186
           +E+M  
Sbjct: 180 EEVMKV 185


>gi|194468465|ref|ZP_03074451.1| ribosome recycling factor [Lactobacillus reuteri 100-23]
 gi|194453318|gb|EDX42216.1| ribosome recycling factor [Lactobacillus reuteri 100-23]
          Length = 187

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  +   L++ +  +R G+ + S+L+ VKVE YG+  PLNQVA++T+ E R L
Sbjct: 8   LNDAKQKMAKSGDALQRTLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+ ++  +E+ I+ SNLGL P  +G  +R+ +P+ TE+RR  LVK   A  EK+K
Sbjct: 68  LITPYDESVLEEIEKAIYASNLGLTPQNDGSSIRLIIPQLTEDRRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K+G  ++D    LE  +Q  TD+ IKN++     K+KE+M 
Sbjct: 128 VAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKKVQNETDAGIKNLEDIASAKEKELME 186


>gi|94985150|ref|YP_604514.1| ribosome recycling factor [Deinococcus geothermalis DSM 11300]
 gi|166230783|sp|Q1IZI9|RRF_DEIGD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|94555431|gb|ABF45345.1| ribosome recycling factor [Deinococcus geothermalis DSM 11300]
          Length = 183

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 70/177 (39%), Positives = 115/177 (64%), Gaps = 3/177 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + ++RMG  I  L+ ++  LRTGR +P +L  V VE YGS +P++QVA++T  + R LV
Sbjct: 9   ADARERMGKAIEALENNLSVLRTGRANPGILKKVMVEYYGSSMPIDQVASITTPDARTLV 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WD+  +  +E+ I +S+LGLNP  +G  + I +P  TEERR  LVK A  YAE++++
Sbjct: 69  ITPWDRGALNPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKNYAEEARV 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++R+IR+  +D +KK        +D +   E ++QKITD  IK ++  F +K++EI+
Sbjct: 129 AIRSIRKHALDEVKKVE---GVGDDEIKRAEAEVQKITDEYIKRVEDTFHKKEQEIL 182


>gi|329947861|ref|ZP_08294793.1| ribosome recycling factor [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328523485|gb|EGF50583.1| ribosome recycling factor [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 185

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   +D+M   +   K ++ T+RTGR +PSM + + V+ YG+  PL Q+A++T+ E R +
Sbjct: 6   MLEAEDKMDKALQAAKSELATIRTGRANPSMFNGIVVDYYGAPTPLQQLASLTIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +D+  +  +   I ES+LG+NP  +G V+R+ +P  TEERR   VK+A + AE S+
Sbjct: 66  LVSPFDRSAMKDIVTAIRESDLGVNPTDDGTVIRVTLPALTEERRKDYVKLARSRAEDSR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VR IR      L+  +K G+A ED V   E+++  +T   ++ +D+    K+ E++  
Sbjct: 126 VQVRGIRAKAKKELEAIKKDGEAGEDDVKRAEHELDGLTKRFVEQVDAALSAKESELLEV 185


>gi|262370222|ref|ZP_06063548.1| ribosome releasing factor [Acinetobacter johnsonii SH046]
 gi|262314564|gb|EEY95605.1| ribosome releasing factor [Acinetobacter johnsonii SH046]
          Length = 184

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 110/179 (61%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  ++  L+     +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+
Sbjct: 7   KDAEDRMNKSLDSLEHGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +++ MVA++++ I ES+LGLNPI     +R+P+   TEE R  + KVA   AE +K+
Sbjct: 67  IQPFERTMVAAIDKAIRESDLGLNPITA-DAIRVPMAALTEETRRDMQKVARNEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  +K   K  + SED      +DIQKITD  +  ID     K+ E++  
Sbjct: 126 AVRNIRRDVLGDIKALLKEKEISEDDERRASDDIQKITDKFVAEIDKRLANKEAELLKV 184


>gi|262376192|ref|ZP_06069422.1| ribosome recycling factor [Acinetobacter lwoffii SH145]
 gi|262308793|gb|EEY89926.1| ribosome recycling factor [Acinetobacter lwoffii SH145]
          Length = 184

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 110/179 (61%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ +DRM  T+  L+     +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+
Sbjct: 7   KDSEDRMNKTLESLEHGFAKVRTGRAHPSILNNVMVSYYGSDVPLNQVANVGVEDSRTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +++ MV+++++ I ES+LGLNPI     +R+P+   TEE R  + KVA   AE +K+
Sbjct: 67  IQPFERSMVSAIDKAIRESDLGLNPITA-DAIRVPMAALTEETRRDMQKVARNEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K   K  + SED      ++IQKITD  +  +D     K+ E+M  
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDEERRAADEIQKITDKFVAEVDKRLAAKEAELMKV 184


>gi|255530032|ref|YP_003090404.1| ribosome recycling factor [Pedobacter heparinus DSM 2366]
 gi|255343016|gb|ACU02342.1| ribosome recycling factor [Pedobacter heparinus DSM 2366]
          Length = 187

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 74/188 (39%), Positives = 115/188 (61%), Gaps = 3/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN +I   LQ+ +  M   I   + ++  +R G+ S  MLD + V+ YG+  PL+QVA++
Sbjct: 1   MNDLIKKQLQDAQATMEKAILHCEAELTKIRAGKASAGMLDGIMVDYYGNPTPLSQVASI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R L+V  W+K ++  +ER I E+N+G+NP  +G V+R+ VP  TEERR  LVK  
Sbjct: 61  NTPDARTLIVQPWEKTLLTPIERAIMEANIGINPQNDGIVIRLVVPPLTEERRKDLVKKV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AE+ +I+VRNIR+D  + +KK  K    S+D + + E ++QKITD+ I  +D   E 
Sbjct: 121 KEEAERGRITVRNIRKDANEKIKKL-KGESVSDDEIKTGEAEVQKITDAYIIKVDKHAEA 179

Query: 179 KKKEIMHF 186
           K+K+IM  
Sbjct: 180 KEKDIMTV 187


>gi|320532043|ref|ZP_08032932.1| ribosome recycling factor [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320135743|gb|EFW27802.1| ribosome recycling factor [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 185

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   +D+M   +   K ++ T+RTGR +PSM + + V+ YG+  PL Q+A++T+ E R +
Sbjct: 6   MLEAEDKMDKALQAAKSELATIRTGRANPSMFNGIVVDYYGAPTPLQQLASLTIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +D+  +  +   I ES+LG+NP  +G V+R+ +P  TEERR   VK+A + AE S+
Sbjct: 66  LVSPFDRSAMKDIVTAIRESDLGVNPTDDGTVIRVTLPALTEERRKDYVKLARSRAEDSR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VR IR      L+  +K G+A ED V   E+++  +T   ++ ID+    K+ E++  
Sbjct: 126 VQVRGIRGKAKKELEAIKKDGEAGEDDVKRAEHELDGLTKRFVEQIDAALSAKESELLEV 185


>gi|262279362|ref|ZP_06057147.1| ribosome releasing factor [Acinetobacter calcoaceticus RUH2202]
 gi|262259713|gb|EEY78446.1| ribosome releasing factor [Acinetobacter calcoaceticus RUH2202]
          Length = 184

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 110/179 (61%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  T+  L+     +RTGR  PS+L+ V V  YGS VPLNQVANV + + R LV
Sbjct: 7   KDSEQRMLKTLESLELGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGIEDSRTLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA   AE +K+
Sbjct: 67  VQPFERTMVSAIDKAIRESDLGLNPITA-DAIRVPLPALTEETRRDMQKVARNEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M  
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELMKV 184


>gi|260654918|ref|ZP_05860406.1| ribosome recycling factor [Jonquetella anthropi E3_33 E1]
 gi|260630420|gb|EEX48614.1| ribosome recycling factor [Jonquetella anthropi E3_33 E1]
          Length = 183

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 66/177 (37%), Positives = 112/177 (63%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++K  M   I  +  + + +RTGR  P ++  VK + YG+  PL Q+A V+VL+ R L +
Sbjct: 5   DVKTPMQKVIDHMNGEFLGIRTGRAHPGLVGDVKADYYGTPTPLKQMATVSVLDARTLQI 64

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + +D+  V ++E+ I  +N+G+ P+V+G+V+R+ +PE T ERR  L K      E++KI+
Sbjct: 65  TPYDQTAVKTIEKAILAANIGVTPVVDGKVIRLSMPELTGERRKELCKYVSKLGEEAKIA 124

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RN+RRD  D  KK+  +G+ SED + +  + +QK TDS +  +D   +EK+KE+M 
Sbjct: 125 LRNLRRDANDFYKKAEDAGEISEDQLKTELDVVQKETDSFVSKVDELVKEKEKEVME 181


>gi|330872736|gb|EGH06885.1| ribosome recycling factor [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 185

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 104/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLAHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  +  I+   ++K+ ++M  
Sbjct: 127 AVRNIRRDALSQLKDLVKDKEISEDEERRAADDVQKLTDKFVAEIEVAVKQKEADLMAV 185


>gi|328955482|ref|YP_004372815.1| ribosome recycling factor [Coriobacterium glomerans PW2]
 gi|328455806|gb|AEB07000.1| ribosome recycling factor [Coriobacterium glomerans PW2]
          Length = 178

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 3/179 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            +I  +M  T++ LK +   +RTGR +  +L  + ++ YG   P+ QVA V V E  +LV
Sbjct: 3   SDISAQMDKTLASLKHNFSKVRTGRANAGILSDISIDYYGVPTPITQVAAVKVPEAHLLV 62

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD+ +  ++ + I  S+LG+ P  +G V+R+P P  TEERR  LVK  H  AE +++
Sbjct: 63  IEPWDRGITDAIVKAIAASDLGITPNSDGSVVRLPFPAPTEERRRELVKECHELAEHARV 122

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+R IRR+       + +    +ED V   +  IQK TD  +  ID   + K+ E+M  
Sbjct: 123 SIRGIRREANGA---AERDENLTEDDVRRDQARIQKRTDEYVAKIDQMLKAKEAEVMEI 178


>gi|254382047|ref|ZP_04997409.1| ribosome recycling factor [Streptomyces sp. Mg1]
 gi|194340954|gb|EDX21920.1| ribosome recycling factor [Streptomyces sp. Mg1]
          Length = 185

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/174 (34%), Positives = 102/174 (58%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K+D   +RTGR  P+M + +  + YG+  P+NQ+A+  V EPRM +V+ +D
Sbjct: 12  KMEKAVVVAKEDFAAIRTGRAHPAMFNKIVADYYGAITPINQLASFAVPEPRMAIVTPFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              + ++E+ I +S+LG+NP  +G+++R+  PE T++RR   +KVA   AE SK+S+R +
Sbjct: 72  ASALRNIEQAIRDSDLGVNPSNDGRIIRVTFPELTQDRRKEYIKVARTKAEDSKVSIRAV 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR   D L K  K  +A ED V   E ++   T   +  +D   + K+ E++  
Sbjct: 132 RRKAKDALDKLVKDKEAGEDEVRRAEKELDDTTAKYVAQVDELLKHKEAELLEV 185


>gi|87199393|ref|YP_496650.1| ribosome recycling factor [Novosphingobium aromaticivorans DSM
           12444]
 gi|123489816|sp|Q2G8K7|RRF_NOVAD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|87135074|gb|ABD25816.1| ribosome recycling factor [Novosphingobium aromaticivorans DSM
           12444]
          Length = 185

 Score =  221 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 80/165 (48%), Positives = 108/165 (65%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D  +++ RM   +  L+ D+  LRTGR + ++LD + VE YGSH+PL QVA V+  EPR
Sbjct: 4   YDKADLERRMKGAVESLRGDLSGLRTGRANTALLDPIVVEVYGSHMPLAQVATVSAPEPR 63

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           +L V VWDK  V  VE+ I  + LGLNPI +G  LR+P+P+ TEERR  L K+A  YAE 
Sbjct: 64  LLSVQVWDKSNVTPVEKAIRSAGLGLNPISDGNTLRLPIPDLTEERRKELAKLASKYAEN 123

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTI 169
           ++I++RN+RRDGMD LK      + SED     E D+QK+TD  I
Sbjct: 124 ARIAIRNVRRDGMDALKADESKKEISEDERKRAETDLQKLTDDII 168


>gi|121612237|ref|YP_999947.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167004904|ref|ZP_02270662.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|166230776|sp|A1VXV6|RRF_CAMJJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|87250479|gb|EAQ73437.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 185

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQKTQS--EKSLEALKKDFTTLRTGKVNIHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKSKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 SELLKV 185


>gi|188995696|ref|YP_001929948.1| ribosome recycling factor [Porphyromonas gingivalis ATCC 33277]
 gi|238689272|sp|B2RLV6|RRF_PORG3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|188595376|dbj|BAG34351.1| putative ribosome recycling factor [Porphyromonas gingivalis ATCC
           33277]
          Length = 186

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +      M   + +L + +  +R G+ SP +LD + V  YG+  PL QVA++   + + +
Sbjct: 7   IAKATANMEKAVEYLDEQLSHVRAGKASPKLLDGIMVMYYGNATPLTQVASINTPDAKTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ W++ ++  +E+ I +S LG+ P   G+++R+ +P  TEERR  LVK     AE +K
Sbjct: 67  VVTPWERSLIKDIEKAIMDSPLGITPENNGELIRLGLPPLTEERRRQLVKQIKGDAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRD +D +KKS K+    ED+    E ++QK+ D  IK ID  F EK+KEIM  
Sbjct: 127 VSVRNARRDAIDAIKKSVKTDGTPEDVAKDAEAEMQKVHDRYIKKIDELFAEKEKEIMTV 186


>gi|320335233|ref|YP_004171944.1| ribosome-recycling factor [Deinococcus maricopensis DSM 21211]
 gi|319756522|gb|ADV68279.1| Ribosome-recycling factor [Deinococcus maricopensis DSM 21211]
          Length = 180

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 69/184 (37%), Positives = 113/184 (61%), Gaps = 5/184 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M ++    + + RM   I  L+  M  LRTGR +P +L  ++VE YGS +P++QVA++T 
Sbjct: 1   MKEIF--ADTRARMTKAIEALENSMSVLRTGRANPGILKKIQVEYYGSTMPIDQVASITA 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R LV+  WD+  +  +E+ I +S+LGLNP  +G  + I +P  TEERR  L+K A  
Sbjct: 59  PDARTLVIQPWDRGAINPIEKAIRDSDLGLNPNNKGDSIFISIPALTEERRKDLIKNAKG 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           YAE+ ++++RN+R+  +D +KK        +D +   E +IQKITD  IK +D   + K+
Sbjct: 119 YAEEGRVAIRNVRKSALDEIKKVE---GVGDDEIKRGEAEIQKITDEYIKKVDDVLDRKE 175

Query: 181 KEIM 184
           ++I+
Sbjct: 176 QDIL 179


>gi|258591445|emb|CBE67746.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF) [NC10
           bacterium 'Dutch sediment']
          Length = 185

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 110/178 (61%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             +  M   I    K    +RTGR S ++LD + VEAYGS VP+NQVA + V E R++ V
Sbjct: 8   KAEKEMRKAIDATLKGFNGVRTGRASLTLLDGLMVEAYGSIVPVNQVATLAVPETRLITV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             WD  ++A++ER   +S+LG++P  +G+++RI +P  TEERR  LVK+    AE+ +++
Sbjct: 68  QPWDPSLLAAIERAFRKSDLGVSPTNDGKMIRIAIPPLTEERRKELVKIVRKIAEEGRVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRN+RR+  + LK+  +  + SED V    + IQ +T+  I  ID    +K+KEIM F
Sbjct: 128 VRNVRREANEALKRHEREKEVSEDEVKHGADVIQDLTNRLIHEIDGLLAKKEKEIMEF 185


>gi|86149668|ref|ZP_01067898.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597400|ref|ZP_01100635.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|22001955|sp|Q9PIR0|RRF_CAMJE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|85839936|gb|EAQ57195.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190461|gb|EAQ94435.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|284925510|gb|ADC27862.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315930894|gb|EFV09879.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 305]
          Length = 185

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQKTQS--EKSLEALKKDFTTLRTGKVNIHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDEGVKSKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 SELLKV 185


>gi|326336602|ref|ZP_08202771.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691267|gb|EGD33237.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 184

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 74/188 (39%), Positives = 115/188 (61%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ ID  L++ K+ M  +++ L+K ++ +R G+ SP ML  V V+ YGS  PL+QVANV
Sbjct: 1   MNEEIDFILESTKEAMQGSVAHLEKSLLNIRAGKASPQMLGSVFVDYYGSQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + +  W+K M++++E+ I  +NLG NP+  G+ + I VP  TEERR  LVK A
Sbjct: 61  NTPDSRTISIQPWEKNMLSTIEKAIMVANLGFNPMNNGETIIISVPPLTEERRKELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              +E++KI VRN R++    +KK     + S+D+    E  +QK+TD  IK ID    +
Sbjct: 121 KGESEEAKIGVRNARQEANKEIKKI----EISDDIKKDTEERVQKLTDKYIKQIDEILAK 176

Query: 179 KKKEIMHF 186
           K+ EI+  
Sbjct: 177 KEAEILKV 184


>gi|295426323|ref|ZP_06818982.1| ribosome recycling factor [Lactobacillus amylolyticus DSM 11664]
 gi|295063996|gb|EFG54945.1| ribosome recycling factor [Lactobacillus amylolyticus DSM 11664]
          Length = 185

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 69/177 (38%), Positives = 118/177 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  K+ M  +I   +K++ ++R G  + S+LD ++V  YG+  PL Q+++V++ EPR+L
Sbjct: 6   IQKAKENMEKSIKVFRKNLASIRAGVANASILDGIQVGYYGAPTPLKQISSVSIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D   +  +E  +  SNLGLNP  +G+V+R+ +P+ T ERR  + K     AE++K
Sbjct: 66  LITPYDINSLDDIEHALLASNLGLNPANDGKVIRLVIPQLTGERRQEIAKEVGKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+RRD M+ LK+  K  + +ED   +LE ++QK+TD +IK ID   ++K+KEI
Sbjct: 126 IAVRNVRRDAMNSLKRQLKDDEITEDEQRNLEKEVQKVTDDSIKEIDKIADDKRKEI 182


>gi|57168360|ref|ZP_00367494.1| ribosome recycling factor [Campylobacter coli RM2228]
 gi|305432776|ref|ZP_07401935.1| ribosome recycling factor [Campylobacter coli JV20]
 gi|57020168|gb|EAL56842.1| ribosome recycling factor [Campylobacter coli RM2228]
 gi|304444173|gb|EFM36827.1| ribosome recycling factor [Campylobacter coli JV20]
          Length = 185

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 112/186 (60%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++++ Q  +     ++  LKKD  TLRTG+V+  +LD ++V+ YGS  PLNQVA V  
Sbjct: 2   INEILNKQKTQS--EKSLEALKKDFTTLRTGKVNTHILDHIQVDYYGSLTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPMLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+SVRNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSVRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTAKIDESVKNKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 SELLKV 185


>gi|218962144|ref|YP_001741919.1| ribosome recycling factor [Candidatus Cloacamonas acidaminovorans]
 gi|167730801|emb|CAO81713.1| ribosome recycling factor [Candidatus Cloacamonas acidaminovorans]
          Length = 184

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            N K++M  +   +      +RTGR S S+LD +K+  YG   P+ Q+ N+++ E RM+V
Sbjct: 6   DNTKEKMQKSFDAMLHQYSKIRTGRASASILDDIKINYYGLPTPIKQLCNISIPEARMIV 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  WDK  +A +E+ I  +N+G+ P  +G V+R+P    TEE+R  +VK     +E +++
Sbjct: 66  VQPWDKTTLADIEKAILAANIGITPENDGNVIRLPFQPLTEEKRRDIVKNIKKISEDTRV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD  D +KK +K  + SED       ++Q +TD  IK ID   + K+KEIM  
Sbjct: 126 AIRNIRRDANDIVKKEKKDSEISEDDEKKQLKELQDLTDDWIKKIDEAEKAKEKEIMEV 184


>gi|161579528|ref|NP_905986.2| ribosome recycling factor [Porphyromonas gingivalis W83]
 gi|39932026|sp|Q7MTP6|RRF_PORGI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 186

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +      M   + +L + +  +R G+ SP +LD + V  YG+  PL QVA++   + + +
Sbjct: 7   IAKATANMEKAVEYLDEQLSHVRAGKASPKLLDGIMVMYYGNATPLTQVASINTPDAKTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV+ W++ ++  +E+ I +S LG+ P   G+++R+ +P  TEERR  LVK     AE +K
Sbjct: 67  VVTPWERSLIKDIEKAIMDSPLGITPENNGELIRLGLPPLTEERRRQLVKQTKGDAEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRD +D +KKS K+    ED+    E ++QK+ D  IK ID  F EK+KEIM  
Sbjct: 127 VSVRNARRDAIDAIKKSVKTDGTPEDVAKDAEAEMQKVHDRYIKKIDELFAEKEKEIMTV 186


>gi|299769701|ref|YP_003731727.1| ribosome recycling factor [Acinetobacter sp. DR1]
 gi|298699789|gb|ADI90354.1| ribosome recycling factor [Acinetobacter sp. DR1]
          Length = 184

 Score =  221 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 110/179 (61%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  T+  L+     +RTGR  PS+L+ V V  YGS VPLNQVANV + + R L+
Sbjct: 7   KDSEQRMLKTLESLELGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGIEDSRTLI 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MV+++++ I ES+LGLNPI     +R+P+P  TEE R  + KVA   AE +K+
Sbjct: 67  VQPFERTMVSAIDKAIRESDLGLNPITA-DAIRVPLPALTEETRRDMQKVARNEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K   K  + SED      +DIQKITD  +  +D     K+ E+M  
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAELMKV 184


>gi|326204054|ref|ZP_08193915.1| ribosome recycling factor [Clostridium papyrosolvens DSM 2782]
 gi|325985821|gb|EGD46656.1| ribosome recycling factor [Clostridium papyrosolvens DSM 2782]
          Length = 185

 Score =  221 bits (564), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 119/179 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + I+++M  TI+ LK ++  +R GR +P++LD + ++ YG+  P+ Q+A V+V E R+++
Sbjct: 7   KPIEEKMKKTINVLKDNLAGIRAGRANPAILDKLTIDYYGAATPIQQIATVSVPEARVIL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  W+ +++  +E+ I +S++G+NP  +G+V+R+  P  TEERR  L K A    E+SK+
Sbjct: 67  IQPWEAKLLKDIEKEIQKSDIGINPNNDGKVIRLVFPALTEERRKELTKQAKKEGEESKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++R+IRRD ++ +K  +K+G+ +ED +   E DIQ +TD  I +ID   E K KEIM  
Sbjct: 127 AIRSIRRDSIEGMKSKKKNGEITEDDLKDAEKDIQNLTDRYIADIDKIIEAKDKEIMEV 185


>gi|78778906|ref|YP_397018.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9312]
 gi|123554500|sp|Q31C13|RRF_PROM9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78712405|gb|ABB49582.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9312]
          Length = 182

 Score =  221 bits (564), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I++ M  +I   +++  T+RTGR + S+LD + VE YG+  P+  +A ++ ++ + + 
Sbjct: 4   QEIQENMNKSIEATQRNFNTIRTGRANASLLDRISVEYYGAETPIKSLATISTVDSQTIS 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISCLQAIEKSISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D  KK  K G  S D     +++IQKIT+  I  I++   EK+KEI+  
Sbjct: 124 ALRNIRRDAVDKEKKDEKDGLISIDESRDNQSEIQKITNKFIALIETKLSEKEKEILKV 182


>gi|210633128|ref|ZP_03297695.1| hypothetical protein COLSTE_01608 [Collinsella stercoris DSM 13279]
 gi|210159282|gb|EEA90253.1| hypothetical protein COLSTE_01608 [Collinsella stercoris DSM 13279]
          Length = 177

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + +I++ M   +  LK +   +RTGR + ++L  + V+ YG   P+ QVA V V E  ML
Sbjct: 1   MSDIRENMDKALESLKHNFAKVRTGRANANVLSDITVDYYGVATPITQVAAVKVPEAHML 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +V ++ + +  S+LG+ P  +G V+R+P P  TEERR  LVK     AE +K
Sbjct: 61  VIEPWDKALVNAIVKAVTASDLGITPNSDGIVVRLPFPAPTEERRRELVKECRELAEHAK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN RRD  +   K  +  + +ED V   +  +QK TD  +  +D   + K+ E+M  
Sbjct: 121 IAIRNTRRDANN---KLERDEELTEDEVRREQAKVQKATDEYVSKVDEMLKAKEAEVMEI 177


>gi|291542738|emb|CBL15848.1| ribosome recycling factor [Ruminococcus bromii L2-63]
          Length = 184

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 110/179 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+   + M   +  ++ +   +R GR +P++LD VKV+ YG+  P+NQ+A V+V E R L
Sbjct: 5   LKKAGESMDRRLEHMRTEFSEIRAGRANPAVLDKVKVDYYGAPTPVNQLAAVSVTEARTL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD  ++  +E+ I  S++G+NP  +G+++R+  P  TE+RR  +VK     AE++K
Sbjct: 65  TIQPWDASVLRQIEKAIQTSDIGINPQNDGKIIRLIFPPLTEDRRKEIVKDVQKIAEETK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I +RN+RR+ +D LK  +K G+ +ED +   E   Q +TD  +K ++S    K+KEI+ 
Sbjct: 125 IQIRNVRRELIDKLKAMKKDGELTEDDLKQGEKKAQDLTDKYVKEVESVSAVKQKEILE 183


>gi|330959202|gb|EGH59462.1| ribosome recycling factor [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 185

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 105/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQVRMQKSLESLAHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  +  I++  ++K+ ++M  
Sbjct: 127 AVRNIRRDALSQLKDLVKDKEISEDEERRAADDVQKLTDKFVAEIEAAVKQKEADLMAV 185


>gi|28868743|ref|NP_791362.1| ribosome recycling factor [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213969121|ref|ZP_03397260.1| ribosome recycling factor [Pseudomonas syringae pv. tomato T1]
 gi|301383984|ref|ZP_07232402.1| ribosome recycling factor [Pseudomonas syringae pv. tomato Max13]
 gi|302064130|ref|ZP_07255671.1| ribosome recycling factor [Pseudomonas syringae pv. tomato K40]
 gi|302134057|ref|ZP_07260047.1| ribosome recycling factor [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|34924934|sp|Q886P0|RRF_PSESM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|28851982|gb|AAO55057.1| ribosome recycling factor [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213926119|gb|EEB59675.1| ribosome recycling factor [Pseudomonas syringae pv. tomato T1]
 gi|331016370|gb|EGH96426.1| ribosome recycling factor [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 185

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 105/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  + +I+   ++K+ ++M  
Sbjct: 127 AVRNIRRDALSQLKDLVKDKEISEDEERRAADDVQKLTDKFVADIEVAVKQKEADLMAV 185


>gi|149277338|ref|ZP_01883480.1| ribosome recycling factor (ribosome releasing factor) [Pedobacter
           sp. BAL39]
 gi|149232215|gb|EDM37592.1| ribosome recycling factor (ribosome releasing factor) [Pedobacter
           sp. BAL39]
          Length = 187

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 76/188 (40%), Positives = 114/188 (60%), Gaps = 3/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN +I   LQ+ +  M   I   + ++  +R G+ S  MLD + V+ YGS   L+QVA++
Sbjct: 1   MNDLIKKQLQDAQASMDKAIDHCESELTKIRAGKASAGMLDGIFVDYYGSSTGLSQVASI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R L+V  W+K M+  +ER I E+N+G+NP  +G V+R+ VP  TEERR  LVK  
Sbjct: 61  NTPDARTLLVQPWEKNMLVPIERAIMEANIGINPQNDGVVIRLVVPPLTEERRRDLVKKV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AE+ KI+VRNIR+D  + +KK  K    S+D + + E ++QKITD+ I  +D   E 
Sbjct: 121 KEEAERGKITVRNIRKDANEKIKKL-KGESVSDDEIKTGEAEVQKITDAYIIKVDKHAEA 179

Query: 179 KKKEIMHF 186
           K+K+IM  
Sbjct: 180 KEKDIMTV 187


>gi|153952376|ref|YP_001397463.1| ribosome recycling factor [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166230775|sp|A7H1T3|RRF_CAMJD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|152939822|gb|ABS44563.1| ribosome recycling factor [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 185

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 64/186 (34%), Positives = 109/186 (58%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+++  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQKTQS--EKSLEALKKDFTTLRTGKINTHILDHITVDYYGNQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD     ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDVYTTKIDESVKSKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 SELLKV 185


>gi|239617981|ref|YP_002941303.1| ribosome recycling factor [Kosmotoga olearia TBF 19.5.1]
 gi|259494547|sp|C5CF34|RRF_KOSOT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|239506812|gb|ACR80299.1| ribosome recycling factor [Kosmotoga olearia TBF 19.5.1]
          Length = 185

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  +   + ++   +RTGR SP++L+ +KV+ YG   P+NQ+A + V E R L
Sbjct: 6   LKDAEERMKKSTEKISEEFSHMRTGRPSPAILEEIKVDYYGVPTPINQLATINVSEDRSL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  W+K M++ +E+ I  SNLGL PI +G V+R+  P  T E+R   VK++   AEK K
Sbjct: 66  IIRPWEKNMLSHIEKAILASNLGLTPINDGNVVRLNFPIPTTEQREKWVKLSKEIAEKGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIRRD +   K+  K+ + +ED +   E ++QK+TD  ++ +D  FE+KKKEIM F
Sbjct: 126 IAVRNIRRDVLKEAKEMEKNKEMTEDDLRRFEEELQKLTDKYVEEMDKLFEKKKKEIMEF 185


>gi|260905212|ref|ZP_05913534.1| ribosome recycling factor [Brevibacterium linens BL2]
          Length = 185

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 59/180 (32%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + F ++D  ++RTGR +P++   ++++ YG+  PL Q+A+    E R +
Sbjct: 6   LAEAREKMDKAVEFTQEDFSSIRTGRANPALFASIEIDYYGAPTPLQQLASFQTPEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D+  +  +E  +  S++G NP  +G V+R+ +PE TEERR   VK+    AE  K
Sbjct: 66  LVTPYDRGALGDIETALRNSDIGANPANDGNVIRVVLPELTEERRKEYVKIVKGKAEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIRR   + L++ +K G A ED VA   +++  +T S + N+D    +K+ E++  
Sbjct: 126 VSIRNIRRHAKETLERIKKDGDAGEDEVARGISELDDLTKSKVDNVDKLLNQKEAELLEV 185


>gi|66044594|ref|YP_234435.1| ribosome recycling factor [Pseudomonas syringae pv. syringae B728a]
 gi|71733636|ref|YP_275975.1| ribosome recycling factor [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257487081|ref|ZP_05641122.1| ribosome recycling factor [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289626032|ref|ZP_06458986.1| ribosome recycling factor [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651451|ref|ZP_06482794.1| ribosome recycling factor [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|75503001|sp|Q4ZWS5|RRF_PSEU2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123635426|sp|Q48F62|RRF_PSE14 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|63255301|gb|AAY36397.1| Ribosome recycling factor [Pseudomonas syringae pv. syringae B728a]
 gi|71554189|gb|AAZ33400.1| ribosome recycling factor [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320323117|gb|EFW79206.1| ribosome recycling factor [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329611|gb|EFW85600.1| ribosome recycling factor [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330867586|gb|EGH02295.1| ribosome recycling factor [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330878176|gb|EGH12325.1| ribosome recycling factor [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330894596|gb|EGH27257.1| ribosome recycling factor [Pseudomonas syringae pv. mori str.
           301020]
 gi|330985111|gb|EGH83214.1| ribosome recycling factor [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331009284|gb|EGH89340.1| ribosome recycling factor [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 185

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 104/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  +  I+   ++K+ ++M  
Sbjct: 127 AVRNIRRDALSQLKDLVKEKEISEDEERRAADDVQKLTDKFVAEIEVAVKQKEADLMAV 185


>gi|73662818|ref|YP_301599.1| ribosome recycling factor [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123642440|sp|Q49X44|RRF_STAS1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|72495333|dbj|BAE18654.1| ribosome recycling factor [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 184

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 73/186 (39%), Positives = 123/186 (66%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +I+    K +M  +I  L +++  +  GR + ++L+ V V+ YG+  P+ Q+A+++V
Sbjct: 1   MSDIIN--ETKSKMQKSIDNLSRELANISAGRANSNLLNGVNVDYYGAPTPVQQLASISV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV+S +DK  V ++E+ I+ +NLG+NP  +G+V+RI VP  TEERR  LVK    
Sbjct: 59  PEARLLVISPYDKSSVGNIEKAINAANLGVNPSSDGEVIRISVPALTEERRKELVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRN+RRD  D LKK +K+   +ED + +  +D+QK+TD +IK ++   EEK+
Sbjct: 119 IGEDAKVAVRNVRRDSNDELKKQQKNSDITEDDLRTQTDDVQKLTDDSIKEVEKLLEEKE 178

Query: 181 KEIMHF 186
           ++IM  
Sbjct: 179 QDIMSV 184


>gi|218561898|ref|YP_002343677.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|112359604|emb|CAL34389.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315928162|gb|EFV07480.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 187

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 4   LNEIFNKQKTQS--EKSLEALKKDFTTLRTGKVNIHILDHITVDYYGTQTPLNQVATVLA 61

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 62  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 121

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 122 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDEGVKSKE 181

Query: 181 KEIMHF 186
            E++  
Sbjct: 182 SELLKV 187


>gi|294790919|ref|ZP_06756077.1| ribosome recycling factor [Scardovia inopinata F0304]
 gi|294458816|gb|EFG27169.1| ribosome recycling factor [Scardovia inopinata F0304]
          Length = 184

 Score =  221 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 67/186 (36%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ V+D  + + +M  TI   K++ + +RTGR +P++ + + V+ YG+  PL  +A + V
Sbjct: 1   MSTVVD--DAQKQMNKTIESTKENFVGIRTGRANPALFNGLTVDYYGAPTPLKALATIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V+ +D    A++E+ I +S+LG+NP  +G V+ + +PE TEERR   VK+AH 
Sbjct: 59  TDNRTLAVTPFDVSQSAAIEKAIRDSDLGVNPRRDGNVIHVTLPELTEERRKDYVKLAHE 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           +AEK K++VR+IRR   + ++ + K G   ED    L+ D++K T    + ID+    K+
Sbjct: 119 FAEKGKVAVRSIRRKAKEDIESATKDGDYGEDEGKRLQADLEKATKKATEEIDTLLHTKE 178

Query: 181 KEIMHF 186
           KEI+  
Sbjct: 179 KEILSV 184


>gi|291277175|ref|YP_003516947.1| ribosome recycling factor [Helicobacter mustelae 12198]
 gi|290964369|emb|CBG40219.1| ribosome recycling factor [Helicobacter mustelae 12198]
          Length = 185

 Score =  221 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 71/186 (38%), Positives = 113/186 (60%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M Q I  Q+ K  M  +I  LK+D +TLR+G+VS ++LD VKV+ YG+  PLNQV +V  
Sbjct: 1   MTQEI-FQHTKTHMDKSIDALKRDFLTLRSGKVSVNILDNVKVDYYGTPTPLNQVGSVIA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   ++++ W+K ++  +ER I E+N+G+NP  +G+ +++  P  T+E+R  + K   A
Sbjct: 60  QDATTILITPWEKNLLKDIERAIQEANIGVNPNNDGETIKLFFPPMTQEQRKEIAKDTKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+KI++RNIR+D  + +KK  K    +ED      + IQK TD   K ID   + K+
Sbjct: 120 MGEKAKIAIRNIRQDSNNQIKKLEKDKSITEDESKKAHDTIQKYTDEYAKKIDEMVKHKE 179

Query: 181 KEIMHF 186
            E+M  
Sbjct: 180 DEVMKV 185


>gi|300743956|ref|ZP_07072976.1| ribosome recycling factor [Rothia dentocariosa M567]
 gi|311113206|ref|YP_003984428.1| ribosome recycling factor [Rothia dentocariosa ATCC 17931]
 gi|300380317|gb|EFJ76880.1| ribosome recycling factor [Rothia dentocariosa M567]
 gi|310944700|gb|ADP40994.1| ribosome recycling factor [Rothia dentocariosa ATCC 17931]
          Length = 185

 Score =  221 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 55/180 (30%), Positives = 103/180 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  TI  +K +   +RTGRV+P++   +  + YG+  PL Q+ +  V + R +
Sbjct: 6   LAEAGEKMDKTIEAIKTEFAKVRTGRVNPAIFSSITADYYGAPTPLQQLVSFNVEDARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D   +A++E+ + +S+LG+NP  +G  +R+ +PE T ERR   +K+ +  AE+++
Sbjct: 66  KIVPFDVSALAAIEKAVRDSDLGVNPSNDGAAIRVVMPEMTSERRKEYIKLVNHKAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN+RR     + K  K G+  ED  A  E ++  +T   +  ID  ++ K+ E++  
Sbjct: 126 VSVRNVRRHAKTVIDKLVKDGEIGEDDGARAEKELDALTKKHVDTIDELYKHKESELLEV 185


>gi|156743850|ref|YP_001433979.1| ribosome recycling factor [Roseiflexus castenholzii DSM 13941]
 gi|189044069|sp|A7NQW5|RRF_ROSCS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|156235178|gb|ABU59961.1| ribosome recycling factor [Roseiflexus castenholzii DSM 13941]
          Length = 185

 Score =  221 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM      L+  + T+RTGR SP++++ + VEAYG+ +PLNQ+A +TV EPRML
Sbjct: 6   LREAESRMKKATEALRNHLATIRTGRASPALVEHLHVEAYGATLPLNQLATITVPEPRML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   V ++ + I  S LG+ P  +G+++R+ +P+ TE RR  L K+  A  E+SK
Sbjct: 66  VIQPFDANTVKAISKAIMNSELGITPTDDGRLIRLAIPQLTEARRKELTKLVRARVEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR+ ++ L+        SED     +  +Q++TD  ++ +D     K+ E+M  
Sbjct: 126 VALRNIRREALEDLRDLEHEKMISEDEHRRAQEKLQELTDRYVRELDHIGATKEAEVMEI 185


>gi|152965386|ref|YP_001361170.1| ribosome recycling factor [Kineococcus radiotolerans SRS30216]
 gi|189044059|sp|A6W7W7|RRF_KINRD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|151359903|gb|ABS02906.1| ribosome recycling factor [Kineococcus radiotolerans SRS30216]
          Length = 185

 Score =  221 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 58/180 (32%), Positives = 106/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I   K D   +RTGR + +M   + V+ YG+  PL Q+A+  + E R +
Sbjct: 6   LLEAEEKMEKAIEVAKGDFGAIRTGRANAAMFHKIMVDYYGAPTPLQQLASFQIPEARSV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  ++ +E+ +  S+LG+NP  +G V+RI +P+ TEERR   +K+A   AE ++
Sbjct: 66  LITPFDRAAMSEIEKALRNSDLGVNPGNDGNVIRIVLPQLTEERRKDYIKIARTKAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN+RR   + L +  K G+A ED V   E +++ +T   +  ID   + K+ E++  
Sbjct: 126 VSLRNVRRRAKEELDRIVKDGEAGEDEVGRAEKELEAVTKKHVDAIDELLKNKEAELLAV 185


>gi|302837099|ref|XP_002950109.1| hypothetical protein VOLCADRAFT_80962 [Volvox carteri f.
           nagariensis]
 gi|300264582|gb|EFJ48777.1| hypothetical protein VOLCADRAFT_80962 [Volvox carteri f.
           nagariensis]
          Length = 266

 Score =  221 bits (563), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 60/179 (33%), Positives = 107/179 (59%), Gaps = 4/179 (2%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++  +RM   ++ +     T+RTGR +P++LD + V+ +G+  PL Q+  VTV + + L+
Sbjct: 92  KDADERMKKCLNVVADGFNTIRTGRANPAILDKITVDYFGAPTPLKQMGAVTVPDSQTLM 151

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ +D+  +  +ER I ES++G+NP  +G+ +R+ +P  T+ERR  L K      E  K+
Sbjct: 152 IAPFDRSTLKDIERAIQESDIGINPNNDGERIRLVMPPMTQERRKDLAKQVSKMTEDGKV 211

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN+R+D M  + K     +  +D   +LE+DIQK+TD  +K +D   + K  E+M  
Sbjct: 212 AVRNVRKDAMKKVDKV----ELPKDDKKALEDDIQKLTDLYVKKLDDMAKAKTDEVMKL 266


>gi|227544958|ref|ZP_03975007.1| ribosome recycling factor [Lactobacillus reuteri CF48-3A]
 gi|300910011|ref|ZP_07127471.1| ribosome recycling factor [Lactobacillus reuteri SD2112]
 gi|227185069|gb|EEI65140.1| ribosome recycling factor [Lactobacillus reuteri CF48-3A]
 gi|300892659|gb|EFK86019.1| ribosome recycling factor [Lactobacillus reuteri SD2112]
          Length = 187

 Score =  221 bits (563), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  +   L++ +  +R G+ + S+L+ VKVE YG+  PLNQVA++T+ E R L
Sbjct: 8   LNDAKQKMAKSGDALQRTLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+ ++  +E+ I+ SNLGL P  +G  +R+ +P+ TE+RR  LVK   A  EK+K
Sbjct: 68  LITPYDESVLEEIEKAIYASNLGLTPQNDGSSIRLIIPQLTEDRRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K+G  ++D    LE  +Q  TD+ IKN++     K+KE+M 
Sbjct: 128 VAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKKVQNETDAGIKNLEDIANTKEKELME 186


>gi|229495839|ref|ZP_04389565.1| ribosome recycling factor [Porphyromonas endodontalis ATCC 35406]
 gi|229317152|gb|EEN83059.1| ribosome recycling factor [Porphyromonas endodontalis ATCC 35406]
          Length = 187

 Score =  221 bits (563), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  +  M + I +L + +  +R G+ +P +LD + V  YG+  PLNQV  VTV + R +V
Sbjct: 9   QQAETGMQNAIEYLDEKLAHIRAGKANPKILDDIMVSYYGTMTPLNQVGTVTVPDARTIV 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K+++  +E+ I +S LG+ P   G ++RI +P  TEERR  LVK      E++KI
Sbjct: 69  ITPWEKKIIKDIEKAIIDSPLGIMPENNGDLIRIGIPPLTEERRKVLVKQVKGEVEEAKI 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN RRD +D +KKS K+    ED+    E  IQK+ D  I   D  F  K+KEI+  
Sbjct: 129 SVRNARRDAIDAVKKSVKADGTPEDVAKDAEAAIQKLHDKYISRCDELFAAKEKEILTV 187


>gi|319937403|ref|ZP_08011810.1| flagellar biosynthetic protein flhB [Coprobacillus sp. 29_1]
 gi|319807769|gb|EFW04362.1| flagellar biosynthetic protein flhB [Coprobacillus sp. 29_1]
          Length = 181

 Score =  221 bits (563), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 115/180 (63%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K++M  +I   K ++ T+RTGR +P+MLD V V  YG   PLNQ+A+++V+E R L
Sbjct: 6   LEETKEKMDKSIDAFKNELSTVRTGRANPTMLDRVMVNYYGEKTPLNQMASISVVEGRQL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +DK  +  +E G++E++LGL P  +G+V+RI VP  TEE R   VK A  +AE +K
Sbjct: 66  MIKPYDKSTLKDIEHGVYEADLGLAPQNDGEVIRINVPALTEETRRGYVKQAKKFAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRR   D + K+      +ED V   +  +QK+TD  +K ID   ++K++++M  
Sbjct: 126 VALRNIRRSANDDVDKA----GLTEDEVKQGKERVQKLTDEYVKIIDQLAKDKEEDLMSV 181


>gi|161507690|ref|YP_001577644.1| ribosome recycling factor [Lactobacillus helveticus DPC 4571]
 gi|172048311|sp|A8YVR6|RRF_LACH4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|160348679|gb|ABX27353.1| ribosome recycling factor Rrf [Lactobacillus helveticus DPC 4571]
 gi|323466331|gb|ADX70018.1| Ribosome-recycling factor [Lactobacillus helveticus H10]
          Length = 185

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 72/177 (40%), Positives = 117/177 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D M  +I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQDNMDKSIKVYQKRLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE +K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+RR+ MD LKK +K G  +ED   +LE  +QKITD + K ID   +EK+KEI
Sbjct: 126 IAVRNVRREAMDALKKEQKDGNITEDEQRNLEKQVQKITDDSTKKIDQLADEKRKEI 182


>gi|260101372|ref|ZP_05751609.1| ribosome recycling factor [Lactobacillus helveticus DSM 20075]
 gi|260084824|gb|EEW68944.1| ribosome recycling factor [Lactobacillus helveticus DSM 20075]
 gi|328465732|gb|EGF36936.1| ribosome recycling factor [Lactobacillus helveticus MTCC 5463]
          Length = 185

 Score =  220 bits (562), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 118/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D M  +I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQDNMDKSIKVYQKRLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE +K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I+VRN+RR+ MD LKK +K G  +ED   +LE  +QKITD + K ID   +EK+KEI+ 
Sbjct: 126 IAVRNVRREAMDALKKEQKDGNITEDEQRNLEKQVQKITDDSTKKIDQLADEKRKEIIQ 184


>gi|123965820|ref|YP_001010901.1| ribosome recycling factor [Prochlorococcus marinus str. MIT 9515]
 gi|166230816|sp|A2BVI3|RRF_PROM5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|123200186|gb|ABM71794.1| Ribosome recycling factor [Prochlorococcus marinus str. MIT 9515]
          Length = 182

 Score =  220 bits (562), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I+  M  ++   +++  T+RTGR + S+LD + VE YG+  P+  +A++  ++ + + 
Sbjct: 4   QEIQSSMNKSVEATQRNFNTIRTGRANASLLDRISVEYYGAETPIKSLASIATVDSQTIS 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISCLQAIEKAISMSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D  KK  K G  S D     + +IQK TD  I  I++   EK+KEI+  
Sbjct: 124 ALRNIRRDAVDKEKKDEKEGLISIDESRDNQLEIQKFTDKYISLIETKLSEKEKEILKV 182


>gi|297626637|ref|YP_003688400.1| ribosome recycling factor (ribosome-releasing factor) (RRF)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922402|emb|CBL56974.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 185

 Score =  220 bits (562), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 104/180 (57%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ + +M   I F K+D   +RTGR +P+M + ++ E YG   P+ Q+A+ +  +PR +
Sbjct: 6   IKSAEKKMQGAIDFAKEDFSGVRTGRANPAMFEKLEAEYYGVPTPIQQLASFSSPDPRTM 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  + ++E+ + +S+LG+NP  +G  +R  +PE TEERR   +K+    AE +K
Sbjct: 66  LITPYDKGALGAIEKAVRDSDLGVNPASDGNAIRAVLPELTEERRKEYIKIVRTKAEDAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++R  RR GMD +K   K  +  ED     E  +  +T    + +D   + K+ E++  
Sbjct: 126 IAIRGHRRRGMDAIKAQEKDKEIGEDDARVSEKQLDAVTKKYTELVDELLKAKEAELLAV 185


>gi|206889935|ref|YP_002249340.1| ribosome recycling factor [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741873|gb|ACI20930.1| ribosome recycling factor [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 185

 Score =  220 bits (562), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 123/179 (68%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +   ++M   +   KKD+ T RTGR S  +LD +KVE YGS VPLNQVA + + EPRM+ 
Sbjct: 7   KKANEKMNQALEVFKKDLSTFRTGRASLGILDNIKVEYYGSTVPLNQVATLGIPEPRMIT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  W+++M++ +ER I +S+LGL PI +G++++I +P  TEERR  LVKV     E++++
Sbjct: 67  IQPWEQKMISEIERAIMKSDLGLTPINDGKMIKIVIPPLTEERRKQLVKVVRKRTEEARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD ++ +KK+ K  K SED    ++ +IQKIT+S I+ ID   E+K+KEIM  
Sbjct: 127 AIRNIRRDIIEEIKKAEKEKKLSEDESRRIQEEIQKITNSFIEKIDHALEQKEKEIMEV 185


>gi|227495072|ref|ZP_03925388.1| ribosome recycling factor [Actinomyces coleocanis DSM 15436]
 gi|226831524|gb|EEH63907.1| ribosome recycling factor [Actinomyces coleocanis DSM 15436]
          Length = 185

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 109/177 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            ++ M   ++  K++   +RTGR +P   + + V+ YG+  PL Q+A+V + E RM++VS
Sbjct: 9   AEEGMEKALAATKREFGNIRTGRANPETFNSLLVDYYGAPTPLQQLASVQIPEARMVLVS 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D+  + ++   I ES+LG+NP  +G V+R  +P  TEERR   VK+A + AE  ++S+
Sbjct: 69  PYDRSAMQAIITAIRESDLGVNPTDDGNVIRCTLPALTEERRKEYVKLAKSKAEDGRVSI 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RN+RR   + L + +K G+A ED V   E +++ +T + +  +D+  + K+K++M  
Sbjct: 129 RNVRRKAKEELDRIKKDGEAGEDEVERAEKELETLTKNFVAKVDAELDAKEKDLMTV 185


>gi|283458519|ref|YP_003363147.1| ribosome recycling factor [Rothia mucilaginosa DY-18]
 gi|283134562|dbj|BAI65327.1| ribosome recycling factor [Rothia mucilaginosa DY-18]
          Length = 203

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 55/180 (30%), Positives = 100/180 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  TI   K +   +RTGRV+P++   +  E YG+  PL Q+ +  V + R +
Sbjct: 24  LAEAGEKMEKTIEATKTEFAKVRTGRVNPAIFSGLTAEYYGAPTPLQQLVSFNVEDARTV 83

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D   +A++E+ + +S+LG+NP  +G  +R+ +PE T ERR    K+ +  AE+++
Sbjct: 84  KIVPFDVTALAAIEKALRDSDLGVNPSNDGAAIRVVMPEMTAERRKEYTKLVNHKAEEAR 143

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RN+RR     + K  K  +  ED  A  E ++   T   I  +D+ ++ K+ E++  
Sbjct: 144 ISIRNVRRHAKTAIDKLVKDSEIGEDEGARAEKELDAQTKKHIDQVDALYKHKEAELLEV 203


>gi|150009958|ref|YP_001304701.1| ribosome recycling factor [Parabacteroides distasonis ATCC 8503]
 gi|255012780|ref|ZP_05284906.1| ribosome recycling factor [Bacteroides sp. 2_1_7]
 gi|256838752|ref|ZP_05544262.1| ribosome recycling factor [Parabacteroides sp. D13]
 gi|262382735|ref|ZP_06075872.1| ribosome recycling factor [Bacteroides sp. 2_1_33B]
 gi|298374315|ref|ZP_06984273.1| ribosome recycling factor [Bacteroides sp. 3_1_19]
 gi|301307843|ref|ZP_07213799.1| ribosome recycling factor [Bacteroides sp. 20_3]
 gi|190360244|sp|A6LHB5|RRF_PARD8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149938382|gb|ABR45079.1| ribosome recycling factor [Parabacteroides distasonis ATCC 8503]
 gi|256739671|gb|EEU52995.1| ribosome recycling factor [Parabacteroides sp. D13]
 gi|262295613|gb|EEY83544.1| ribosome recycling factor [Bacteroides sp. 2_1_33B]
 gi|298268683|gb|EFI10338.1| ribosome recycling factor [Bacteroides sp. 3_1_19]
 gi|300834186|gb|EFK64800.1| ribosome recycling factor [Bacteroides sp. 20_3]
          Length = 187

 Score =  220 bits (562), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M   I +L + +  +R G+ +P +LD VKV  YG+ VPL  VA VTV + R +
Sbjct: 8   IKAGEEKMTFAIEYLDEQLSHIRAGKANPKILDCVKVMYYGAPVPLTNVATVTVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K+++  +E+GI +S LG+ P   G+V+R+ +P  TEERR  LVK     AE +K
Sbjct: 68  MITPWEKKIIRDIEKGILDSELGITPENNGEVIRLGIPPLTEERRRQLVKQCKQEAENAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ISVRN RRD ++ LKKS KS    ED+    E ++QKI D  IK ID  +  K+KE+M  
Sbjct: 128 ISVRNARRDAIEALKKSIKSDGVPEDVEKDAEAEVQKIHDKFIKKIDELYAAKEKEVMTV 187


>gi|319789070|ref|YP_004150703.1| ribosome recycling factor [Thermovibrio ammonificans HB-1]
 gi|317113572|gb|ADU96062.1| ribosome recycling factor [Thermovibrio ammonificans HB-1]
          Length = 185

 Score =  220 bits (561), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++   RM   +  LK D   LRTGR S  +++ +KV+ YGS + + Q+A ++V E   +
Sbjct: 6   LKDADKRMKKAVEVLKADFAGLRTGRASTVLVEDIKVDYYGSTMTIKQIAQISVPEANQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD  +V +VE+ I ES+LG+ P  +G ++R+ +P  TEERR  LVK A   AE+++
Sbjct: 66  VIQPWDASVVPNVEKAIRESDLGVQPQRDGNIIRVILPPLTEERRKELVKKAGKMAEQAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIR + M  L K +K G  SED +   ++++QKITD   K +D+  ++K++EI+  
Sbjct: 126 IAIRNIRHEIMKELDKLKKEGGYSEDDIKRAKDELQKITDKYTKEVDNLLQKKEEEILTI 185


>gi|295136354|ref|YP_003587030.1| ribosome releasing factor [Zunongwangia profunda SM-A87]
 gi|294984369|gb|ADF54834.1| ribosome releasing factor [Zunongwangia profunda SM-A87]
          Length = 184

 Score =  220 bits (561), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 81/188 (43%), Positives = 115/188 (61%), Gaps = 6/188 (3%)

Query: 1   MNQVIDL--QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M + I+L   + ++ M + IS L K ++ +R G+ SPSML  V VE YGS  PLNQVANV
Sbjct: 1   MEEEIELIIDSAEEGMQNAISHLNKQLLNIRAGKASPSMLGSVMVEYYGSLTPLNQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + V  ++K  + ++E+GI ++NLG NP+  G+ + I VP  TEERR  LVK A
Sbjct: 61  NAPDARTISVQPFEKGSIPNIEKGILQANLGFNPMNNGESVIISVPPLTEERRKQLVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            + AE +K+ VRN R+   + LKK     + SED+  + E DIQ++TD  I  ID   E 
Sbjct: 121 KSEAEDAKVGVRNDRKTANNELKKI----EVSEDLQKNAEADIQELTDKYIAKIDRILEA 176

Query: 179 KKKEIMHF 186
           K+KEIM  
Sbjct: 177 KEKEIMTI 184


>gi|302187901|ref|ZP_07264574.1| ribosome recycling factor [Pseudomonas syringae pv. syringae 642]
          Length = 185

 Score =  220 bits (561), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 105/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  + +I+   ++K+ ++M  
Sbjct: 127 AVRNIRRDALSQLKDLVKEKEISEDEERRAADDVQKLTDKFVADIEVAVKQKEADLMAV 185


>gi|148926382|ref|ZP_01810066.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145844774|gb|EDK21879.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 183

 Score =  220 bits (561), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N K +   ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V   +   +
Sbjct: 4   LTNKKPKSEKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLASDASTI 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A  EK+K
Sbjct: 64  SITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKAMGEKAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+ E++  
Sbjct: 124 VSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKSKESELLKV 183


>gi|148543919|ref|YP_001271289.1| ribosome recycling factor [Lactobacillus reuteri DSM 20016]
 gi|184153315|ref|YP_001841656.1| ribosome recycling factor [Lactobacillus reuteri JCM 1112]
 gi|227364829|ref|ZP_03848877.1| ribosome recycling factor [Lactobacillus reuteri MM2-3]
 gi|325682546|ref|ZP_08162063.1| ribosome recycling factor [Lactobacillus reuteri MM4-1A]
 gi|166991557|sp|A5VJC8|RRF_LACRD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229564260|sp|B2G6U4|RRF_LACRJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|148530953|gb|ABQ82952.1| ribosome recycling factor [Lactobacillus reuteri DSM 20016]
 gi|183224659|dbj|BAG25176.1| ribosome recycling factor [Lactobacillus reuteri JCM 1112]
 gi|227070173|gb|EEI08548.1| ribosome recycling factor [Lactobacillus reuteri MM2-3]
 gi|324978385|gb|EGC15335.1| ribosome recycling factor [Lactobacillus reuteri MM4-1A]
          Length = 187

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  +   L++ +  +R G+ + S+L+ VKVE YG+  PLNQVA++T+ E R L
Sbjct: 8   LNDAKQKMAKSGYALQRTLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+ ++  +E+ I+ SNLGL P  +G  +R+ +P+ TE+RR  LVK   A  EK+K
Sbjct: 68  LITPYDESVLEEIEKAIYASNLGLTPQNDGSSIRLIIPQLTEDRRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K+G  ++D    LE  +Q  TD+ IKN++     K+KE+M 
Sbjct: 128 VAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKKVQNETDAGIKNLEDIANAKEKELME 186


>gi|315453412|ref|YP_004073682.1| ribosome recycling factor [Helicobacter felis ATCC 49179]
 gi|315132464|emb|CBY83092.1| ribosome recycling factor [Helicobacter felis ATCC 49179]
          Length = 185

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 65/179 (36%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +++M  ++  L +D  TLR+G+VS S+++ V+V+ YG+  PLNQV +V   +   L 
Sbjct: 7   KQTQNQMHKSLEALLRDFTTLRSGKVSISLVENVRVDYYGTPTPLNQVGSVIASDASTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K ++  +ER + E+NLG NP  +G+ +++  P  T E+R  + K A    EK+K+
Sbjct: 67  ITPWEKNLLKDIERALQEANLGANPNNDGESVKLFFPPMTSEQRKEIAKEAKGMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K    SED       ++QKITDS IK I+   + K++EI+  
Sbjct: 127 AVRNIRQDANNQIKKLEKDKAISEDQGKKALAEVQKITDSAIKKIEEVLKHKEEEILKI 185


>gi|259503115|ref|ZP_05746017.1| ribosome recycling factor [Lactobacillus antri DSM 16041]
 gi|259168981|gb|EEW53476.1| ribosome recycling factor [Lactobacillus antri DSM 16041]
          Length = 186

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  +   L++ +  +R G+ + S+L+ VKVE YG+  PLNQVA++T+ E R L
Sbjct: 8   LNDAKQKMKKSGEALQRSLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D+ ++  +E+ I+ SNLGL P  +G  +R+ +P+ TE+RR  LVK   A  EK+K
Sbjct: 68  LVTPYDESILEEIEKAIYASNLGLTPQNDGSAIRLIIPQLTEDRRKELVKDVKAELEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K+G  ++D    LE  +Q  TD+ IKN++     K+KE++ 
Sbjct: 128 VAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKQVQNETDAGIKNLEEIAGAKEKELLQ 186


>gi|86153726|ref|ZP_01071929.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842687|gb|EAQ59899.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 185

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LNEIFNKQKTQS--EKSLEALKKDFTTLRTGKVNIHILDHITVDYYGTQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+TD+    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDAYTIKIDESVKSKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 SELLKV 185


>gi|118580463|ref|YP_901713.1| ribosome recycling factor [Pelobacter propionicus DSM 2379]
 gi|166230813|sp|A1AQN5|RRF_PELPD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118503173|gb|ABK99655.1| ribosome recycling factor [Pelobacter propionicus DSM 2379]
          Length = 185

 Score =  219 bits (560), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++K  M  T++ LK +   +RTGR S ++LD VK++ YG+  P++Q+A + + EPRM+
Sbjct: 6   LSDMKTHMEKTVAVLKAEFQKVRTGRASTAILDSVKMDYYGNPTPISQIATLAIPEPRMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ W+ + ++ +E+ I  +N+GL P  +G+ +R+ +P  TEERR  +VK     AE ++
Sbjct: 66  TITPWEAKQISVIEKAIFNANIGLTPSNDGKSIRLSLPPLTEERRREIVKDLKKMAEDNR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD +D LKK  K    +ED +   E ++Q  T S    ID     K+KE+M  
Sbjct: 126 VALRNIRRDAIDRLKKLEKDKSITEDELKKYEKEVQDNTKSFEIKIDEAMTNKEKEVMEV 185


>gi|289675260|ref|ZP_06496150.1| ribosome recycling factor [Pseudomonas syringae pv. syringae FF5]
 gi|330896060|gb|EGH28281.1| ribosome recycling factor [Pseudomonas syringae pv. japonica str.
           M301072PT]
 gi|330936821|gb|EGH40974.1| ribosome recycling factor [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330975398|gb|EGH75464.1| ribosome recycling factor [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 185

 Score =  219 bits (560), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 103/179 (57%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLAQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  +  I+   ++K+ ++M  
Sbjct: 127 AVRNIRRDALSQLKDLVKEKEISEDEERRAADDVQKLTDKFVAEIEVAVKQKEADLMAV 185


>gi|257464022|ref|ZP_05628407.1| ribosome recycling factor (RRF) [Fusobacterium sp. D12]
 gi|317061543|ref|ZP_07926028.1| ribosome recycling factor [Fusobacterium sp. D12]
 gi|313687219|gb|EFS24054.1| ribosome recycling factor [Fusobacterium sp. D12]
          Length = 189

 Score =  219 bits (560), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 114/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +M  T+   K+   ++R GR S +MLD +KVE YGS +PLNQVA V+  E R+L
Sbjct: 8   IQECESKMKKTVEATKEKFTSIRAGRASVAMLDTIKVEQYGSEMPLNQVATVSAPEARLL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M+  +E+ I  +NLG+NP  +G+V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 68  VIDPWDKTMIPKIEKAILAANLGMNPNNDGRVVRLVMPELTAERRKEYVKLAKKEAENGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D    LKK  K  +   SED +   E ++Q +TD TIK +D    +K+KEI
Sbjct: 128 IAVRNIRKDMNTALKKIEKDKESGMSEDELKRFEAEVQTLTDKTIKELDELLAKKEKEI 186


>gi|315038582|ref|YP_004032150.1| ribosome recycling factor [Lactobacillus amylovorus GRL 1112]
 gi|312276715|gb|ADQ59355.1| ribosome recycling factor [Lactobacillus amylovorus GRL 1112]
          Length = 185

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 69/177 (38%), Positives = 116/177 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  ++ M  +I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQENMDKSIKVYQKKLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+RRD M+ LK+  K G  +ED   +LE  +QK+TD   K ID   +EK+KEI
Sbjct: 126 IAVRNVRRDAMNSLKREEKDGDITEDEQRNLEKQVQKVTDGAAKKIDQLADEKRKEI 182


>gi|325681407|ref|ZP_08160933.1| ribosome recycling factor [Ruminococcus albus 8]
 gi|324106897|gb|EGC01187.1| ribosome recycling factor [Ruminococcus albus 8]
          Length = 184

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 120/186 (64%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN++ +    K++M  +++ +  D   +R GR +P++LD VKVE YG+  P+NQ+A ++V
Sbjct: 1   MNEIKN--KAKEKMEKSVNVMLSDFAAIRAGRANPAVLDKVKVEYYGAPTPVNQMAAISV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+LV++ WDK  + S+E+ I  S++G+NP  +GQ +R+  P+ TE+RR  +VK    
Sbjct: 59  AEARILVITPWDKSTLKSIEKAIQASDIGINPQNDGQTIRLIFPQLTEDRRKEIVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  K++VR+IRRD ++ +K  +K+ + +ED     E  IQK+TD  +K ID+   EK+
Sbjct: 119 GGEDCKVAVRSIRRDAIEKIKAKKKNNEITEDEQKDGEEAIQKLTDKFVKEIDAHVAEKE 178

Query: 181 KEIMHF 186
           KEI+  
Sbjct: 179 KEILSI 184


>gi|255524238|ref|ZP_05391197.1| ribosome recycling factor [Clostridium carboxidivorans P7]
 gi|296185359|ref|ZP_06853769.1| ribosome recycling factor [Clostridium carboxidivorans P7]
 gi|255512063|gb|EET88344.1| ribosome recycling factor [Clostridium carboxidivorans P7]
 gi|296050193|gb|EFG89617.1| ribosome recycling factor [Clostridium carboxidivorans P7]
          Length = 185

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 118/180 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++   ++M  T+  LK+++ +++ GR +P+MLD ++ E YG+  P+NQ+AN++V EPR+L
Sbjct: 6   MKKADEKMNKTVEALKRELASMKAGRANPAMLDKIEAEYYGTMTPINQLANISVPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK    ++E+ I +S+LG+NP  +G+++R+ + E TEE R  +VK      E SK
Sbjct: 66  AIQPWDKGSFKAIEKAILKSDLGINPSSDGEMIRLVIAELTEETRKNIVKNIKKDGEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR+IRRD  D +K  +K    SED +   E++IQK TD+ IK +D   E K+KEIM  
Sbjct: 126 VAVRSIRRDCNDKIKVLKKESDISEDEIKKAEDEIQKKTDAFIKQVDKIVEAKEKEIMSL 185


>gi|126666177|ref|ZP_01737157.1| ribosome recycling factor [Marinobacter sp. ELB17]
 gi|126629499|gb|EBA00117.1| ribosome recycling factor [Marinobacter sp. ELB17]
          Length = 185

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 102/178 (57%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             + +M  +I  L      +RTGR  PS+LD V V  YG   PL QVA+V V + R L V
Sbjct: 8   EAEIKMTKSIEALASAFNKIRTGRAHPSILDSVMVNYYGQETPLRQVASVNVEDSRTLTV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S W+K +V  +E+ I  S+LGLNP   G ++R+P+P  TEE R  +VK A A AE  ++S
Sbjct: 68  SPWEKNLVPQIEKAIMTSDLGLNPSTSGDLIRLPMPMLTEETRKNMVKQARADAEHGRVS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRN RRD    LK+  K    SED     E ++QK+TD  I  ++   + K++++M  
Sbjct: 128 VRNARRDANSTLKELLKDKDISEDDERRGEEEVQKLTDRFIAEVEKLLKGKEEDLMAV 185


>gi|308800952|ref|XP_003075257.1| putative Ribosome recycling factor, (ISS) [Ostreococcus tauri]
 gi|116061811|emb|CAL52529.1| putative Ribosome recycling factor, (ISS) [Ostreococcus tauri]
          Length = 236

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 63/181 (34%), Positives = 106/181 (58%), Gaps = 1/181 (0%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           + I+L +  +RM  T+  +  D  T+RTGR + S+LD ++V+ YG+  PL  +AN +  +
Sbjct: 54  EEIEL-DAMERMEKTMDAIANDFSTVRTGRANASVLDRIEVDYYGAATPLKTIANASTPD 112

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            + +V+  +DK  +  +ER I+ES+LG+ P  +G V+R+ VP  TEERR  L K+     
Sbjct: 113 AQTIVIQPFDKGAIKDIERAINESDLGMTPSNDGNVIRLNVPTLTEERRKELAKLVSKLG 172

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E  K+++RN+RRD M   +K  K     ED +A L+  ++ +T + +K +D     K  E
Sbjct: 173 EDGKVALRNVRRDAMKAYEKLEKDNALGEDEIAKLKKSMEDLTSAYVKKVDEATAAKSAE 232

Query: 183 I 183
           +
Sbjct: 233 L 233


>gi|225619145|ref|YP_002720371.1| ribosome recycling factor [Brachyspira hyodysenteriae WA1]
 gi|225213964|gb|ACN82698.1| ribosome recycling factor [Brachyspira hyodysenteriae WA1]
          Length = 182

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/176 (46%), Positives = 112/176 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ KDRM   IS L+ D+  +RTGR + S+LD VKVEAYGS +PL QV NV+  + R ++
Sbjct: 4   ESYKDRMEKAISSLQNDLKGIRTGRANASILDGVKVEAYGSSMPLKQVGNVSTPDSRTIM 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK +V+ +E+ I +++LG NP  +G  +RI VPE T+ERR  L K      E++KI
Sbjct: 64  IQPFDKGLVSDIEKAILKADLGFNPFNDGGNIRIVVPELTKERREELKKGVRHRGEEAKI 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +VRNIRRD  D +KK  K    +ED   S E  IQ  TDS IK ID     K+KE+
Sbjct: 124 AVRNIRRDENDKIKKELKDKTITEDESKSQEKKIQNDTDSYIKKIDDMINTKEKEL 179


>gi|295111329|emb|CBL28079.1| ribosome recycling factor [Synergistetes bacterium SGP1]
          Length = 185

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 116/180 (64%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L+ +++ M   I FL+ + +++RTGR  P ++  +K++ YG+  PL Q+AN+T+ E R 
Sbjct: 5   ELKELQESMDKAIDFLQNEYLSIRTGRAHPGLVSDIKLDYYGTPTPLKQIANITIPESRT 64

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + ++ +D+  + ++E+ I  +N+G+ P  +G  +R+ +PE T ERR+ L K+    AE +
Sbjct: 65  IQIAPFDRTSLKAIEKAILAANIGMTPQNDGASIRLTLPELTRERRVELTKLLAKKAEDA 124

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++ VRN RRD ++ LKK  K+ + +ED + +L   +Q  TD+ +K +D  ++ K+KE++ 
Sbjct: 125 RVVVRNYRRDAIESLKKQEKASEITEDDLKTLTKGVQDKTDAYVKKVDEIYKAKEKEVLE 184


>gi|225574998|ref|ZP_03783608.1| hypothetical protein RUMHYD_03077 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037845|gb|EEG48091.1| hypothetical protein RUMHYD_03077 [Blautia hydrogenotrophica DSM
           10507]
          Length = 183

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/180 (45%), Positives = 117/180 (65%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ   D+M  T   L+ D+ T+R GR +P +LD ++V+ YG+  PL QVAN+TV EPR++
Sbjct: 5   LQKYDDKMSKTKKSLEADLATIRAGRANPHILDKIQVDYYGTPSPLQQVANITVPEPRVI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+ +MV  + + I  S+LG+NP  +G+++R+ +PE TEERR  LVK      E +K
Sbjct: 65  QIQPWEAKMVKEISKAILSSDLGINPNTDGKMIRLILPELTEERRKELVKDVKKRGEAAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  D  KK  K+   SED V  LE+ IQK+TD  +K IDS  E+K KEI+  
Sbjct: 125 VAIRNIRRDANDAFKKLAKA-DVSEDEVKELEDKIQKMTDKAVKEIDSTVEQKSKEILTV 183


>gi|254443219|ref|ZP_05056695.1| ribosome recycling factor [Verrucomicrobiae bacterium DG1235]
 gi|198257527|gb|EDY81835.1| ribosome recycling factor [Verrucomicrobiae bacterium DG1235]
          Length = 186

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 66/183 (36%), Positives = 111/183 (60%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++      +++++   I     +   + TG+ +P M++ + VEAYGS + L ++A +T 
Sbjct: 1   MDEETIFLTLEEKVEKAIEHTANEFAGVNTGKANPGMVEGISVEAYGSQMSLKEMAAITT 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R + +  WDK ++ ++E+ I  SN+G+ P + G V+R+P+PE T ERR +LVKV   
Sbjct: 61  PDARTIAIQPWDKSVIKAIEKAILTSNIGITPAIMGDVIRLPLPELTGERRQSLVKVVSK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  ++++RN RRD MD +KK +K G  SED +   E DIQ  TD +IK I+     K+
Sbjct: 121 QAEDGRVAIRNSRRDAMDAIKKLQKDGDISEDDLKRCEKDIQNTTDESIKKINDLLAAKE 180

Query: 181 KEI 183
           K++
Sbjct: 181 KDL 183


>gi|220915424|ref|YP_002490728.1| ribosome recycling factor [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254809486|sp|B8J9V9|RRF_ANAD2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219953278|gb|ACL63662.1| ribosome recycling factor [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 188

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/188 (37%), Positives = 113/188 (60%), Gaps = 2/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M  + D  L ++  R+  T+  L+ ++  +RTGR S  +LD V+V+ YG+  PLNQVA +
Sbjct: 1   MGTIADDILDDLHGRILKTLDQLRTELAAVRTGRASLHLLDNVRVDYYGTPTPLNQVATL 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +V E R++VV  W+K M+  +E+ I + NLGLNP+ +  ++R+P+P  TEERR  +VK  
Sbjct: 61  SVPEARLIVVKPWEKSMIPPIEKAIRDGNLGLNPMSDKDLVRVPIPALTEERRKEIVKQV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E+ KI+VRN+RR+  + ++ + K G  S D        +QK TD  +K ID     
Sbjct: 121 KHKGEEHKIAVRNVRREAKELIEVAEKDGDISGDDAEKALEKMQKETDDGVKKIDEIVAA 180

Query: 179 KKKEIMHF 186
           K+K+++  
Sbjct: 181 KEKDVLQV 188


>gi|237800146|ref|ZP_04588607.1| ribosome recycling factor [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331023003|gb|EGI03060.1| ribosome recycling factor [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 185

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 104/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQVRMQKSLESLAHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LK   K  + SED      +DIQK+TD  +  I+   ++K+ ++M  
Sbjct: 127 AVRNIRRDALSQLKDLVKEKEISEDEERRGADDIQKLTDKFVAEIEVAVKQKEADLMAV 185


>gi|325295600|ref|YP_004282114.1| ribosome-recycling factor [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325066048|gb|ADY74055.1| Ribosome-recycling factor [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 185

 Score =  219 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 113/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  +RM   +  LK D   LRTGR S  +++ +KV+ YGS + + Q+A + V EP  +
Sbjct: 6   LKDADNRMKKAVEVLKTDFAGLRTGRASTVLVEDIKVDYYGSIMTIKQIAQIAVPEPTQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD  ++ ++E+ I ES+LG+ P  +G ++RI +P  TEERR  LVK A   AE++K
Sbjct: 66  TIQPWDVSVIPNIEKAIRESDLGVQPQRDGNIIRINLPPLTEERRKELVKKAGKMAEQAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIR + M  L K +K G  SED +   ++++QKITD   K ID   ++K++EI+  
Sbjct: 126 IAIRNIRHEIMKELDKLKKEGGYSEDDIKRAKDELQKITDKHTKKIDELLQKKEEEILTV 185


>gi|328954577|ref|YP_004371911.1| Ribosome-recycling factor [Desulfobacca acetoxidans DSM 11109]
 gi|328454901|gb|AEB10730.1| Ribosome-recycling factor [Desulfobacca acetoxidans DSM 11109]
          Length = 185

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ ++ +M   +  L++D   +RTGR S ++L+ +K+EAYG+ +P++QVA++   EPR+L
Sbjct: 6   IKEMQRKMDRALEVLRQDFSRIRTGRASVALLEGIKMEAYGATMPISQVASLAAPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD  +++ +E+ + +S+LGL P  +G+++RIP+P  T ERR  LVK      E+SK
Sbjct: 66  TIQPWDSSLMSDLEKALLKSDLGLTPSNDGKIIRIPIPPLTTERRKELVKTTKKMTEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR+  + LK+ +K  + SED V   + ++QK TD  IK  D    EK+KEIM F
Sbjct: 126 VALRNLRREANELLKELKKEKQISEDEVFKAQEEVQKATDDYIKKADGLAAEKEKEIMSF 185


>gi|298488335|ref|ZP_07006367.1| Ribosome recycling factor [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298157157|gb|EFH98245.1| Ribosome recycling factor [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 185

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 103/179 (57%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV + R L 
Sbjct: 7   KDAQTRMQKSLESLNHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  ++  M+A+V++ I  S LG NP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFELNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARDAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LK   K  + SED      +D+QK+TD  +  I+   ++K+ ++M  
Sbjct: 127 AVRNIRRDALSQLKDLVKEKEISEDEERRAADDVQKLTDKFVAEIEVAVKQKEADLMAV 185


>gi|289178551|gb|ADC85797.1| Ribosome Recycling Factor (RRF) [Bifidobacterium animalis subsp.
           lactis BB-12]
          Length = 186

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  V+D    K++M  ++   K++   +RTGR +P++L+ + VE YG+  PL  VA + V
Sbjct: 3   MANVVD--QSKEQMKKSVESTKENFAGIRTGRANPALLNGIVVEYYGAPTPLKHVATIGV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P   G  + + +PE TE+RR   VK+A +
Sbjct: 61  PEPRTLSVTPFDPSQANAVEKALRDSDLGASPRRNGSAILLTMPELTEDRRKEYVKLAKS 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G+  ED    L  ++ K+T +T   +D+  E K+
Sbjct: 121 KAEDGKVAVRNIRRKSKEAIDKAVKDGEMGEDEGDRLLKELDKVTKATTDELDALLEAKQ 180

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 181 KEIMEV 186


>gi|197120712|ref|YP_002132663.1| ribosome recycling factor [Anaeromyxobacter sp. K]
 gi|238689905|sp|B4UMC6|RRF_ANASK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|196170561|gb|ACG71534.1| ribosome recycling factor [Anaeromyxobacter sp. K]
          Length = 188

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/188 (37%), Positives = 113/188 (60%), Gaps = 2/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M  + D  L ++  R+  T+  L+ ++  +RTGR S  +LD V+V+ YG+  PLNQVA +
Sbjct: 1   MGTIADDILDDLHGRILKTLDQLRTELAAVRTGRASLHLLDNVRVDYYGTPTPLNQVATL 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +V E R++VV  W+K M+  +E+ I + NLGLNP+ +  ++R+P+P  TEERR  +VK  
Sbjct: 61  SVPEARLIVVKPWEKSMIPPIEKAIRDGNLGLNPMSDKDLVRVPIPALTEERRKEIVKQV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E+ KI+VRN+RR+  + ++ + K G  S D        +QK TD  +K ID     
Sbjct: 121 KHKGEEHKIAVRNVRREAKELIEVAEKDGDISGDDAEKALEKMQKETDEGVKKIDEIVAA 180

Query: 179 KKKEIMHF 186
           K+K+++  
Sbjct: 181 KEKDVLQV 188


>gi|33861078|ref|NP_892639.1| ribosome recycling factor [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|39932081|sp|Q7V2F9|RRF_PROMP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33639810|emb|CAE18980.1| Ribosome recycling factor [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 182

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I+  M  ++   +++  T+RTGR + S+LD + VE YG+  P+  +A+++ ++ + + 
Sbjct: 4   QEIQSSMNKSVEATQRNFNTIRTGRANASLLDRISVEYYGAETPIKSLASISTIDSQTIS 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   + ++E+ I  S+LG+ P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISSLQTIEKAISVSDLGITPNNDGKVIRINVPPLTEERRKEFCKLASKYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +D  KK  K G  S+D+    + +IQK TD  I  I++   EK+KEI+  
Sbjct: 124 ALRNIRRDAVDKEKKDEKEGLISKDVSRDNQLEIQKFTDKYISLIETKLSEKEKEILKV 182


>gi|312871359|ref|ZP_07731455.1| ribosome recycling factor [Lactobacillus iners LEAF 3008A-a]
 gi|312872418|ref|ZP_07732487.1| ribosome recycling factor [Lactobacillus iners LEAF 2062A-h1]
 gi|312873341|ref|ZP_07733394.1| ribosome recycling factor [Lactobacillus iners LEAF 2052A-d]
 gi|311091131|gb|EFQ49522.1| ribosome recycling factor [Lactobacillus iners LEAF 2052A-d]
 gi|311092000|gb|EFQ50375.1| ribosome recycling factor [Lactobacillus iners LEAF 2062A-h1]
 gi|311093111|gb|EFQ51459.1| ribosome recycling factor [Lactobacillus iners LEAF 3008A-a]
          Length = 185

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 75/183 (40%), Positives = 122/183 (66%), Gaps = 1/183 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ VI ++  K  M  +IS  +K++  +R G  + S+LD +KVE YG   PL Q++++T+
Sbjct: 1   MSNVI-IEKAKANMSKSISVFEKELGGIRAGVANASLLDGIKVEYYGVPTPLTQMSSITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+++ +DK  + ++E  I  S+LG+ P  +G V+RI +P+ T ERR+ + K    
Sbjct: 60  PEARVLMITPFDKTTLNNIEHAILASDLGITPANDGSVVRIVIPQLTGERRIEIAKKVGK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++KI++RNIRR+G+D LKK +K G+ +ED +   E DIQKITD   K++D+  ++K 
Sbjct: 120 LAEQAKIAIRNIRREGIDALKKQQKDGEITEDDLHKFEKDIQKITDDATKDVDALADKKS 179

Query: 181 KEI 183
           KEI
Sbjct: 180 KEI 182


>gi|24215994|ref|NP_713475.1| ribosome recycling factor [Leptospira interrogans serovar Lai str.
           56601]
 gi|45656744|ref|YP_000830.1| ribosome recycling factor [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|34924967|sp|Q8F143|RRF_LEPIN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|59798561|sp|Q72U11|RRF_LEPIC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|24197218|gb|AAN50493.1|AE011490_8 ribosome recycling factor [Leptospira interrogans serovar Lai str.
           56601]
 gi|45599980|gb|AAS69467.1| ribosome recycling factor [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 184

 Score =  219 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 80/177 (45%), Positives = 121/177 (68%), Gaps = 2/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +K +M  TI  +KKD  T+RTGR +PS+++ ++V+ YG+  P+NQ+ N++V EPRML
Sbjct: 7   ISGMKTKMDKTIDLVKKDFGTIRTGRANPSLVEDIRVDYYGNQTPINQLGNISVPEPRML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +DK ++  +E+ I  S LGL P  +G V+RI +PE T ERR  L KV  + +E+ K
Sbjct: 67  VISPYDKGIMKDIEKAIQTSGLGLQPTNDGVVIRIVIPELTGERRKELAKVVKSKSEEKK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD M+ LKK   +   S+D + S+++ IQKITDS I  I +   EK+KEI
Sbjct: 127 VAIRNIRRDAMEDLKKH--TEGMSQDEIKSVQDQIQKITDSYIDKISALTAEKEKEI 181


>gi|229824928|ref|ZP_04450997.1| hypothetical protein GCWU000182_00277 [Abiotrophia defectiva ATCC
           49176]
 gi|229790931|gb|EEP27045.1| hypothetical protein GCWU000182_00277 [Abiotrophia defectiva ATCC
           49176]
          Length = 184

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 121/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++   L   +D+M  TI+ L ++ +T+R GR +P +LD +KV+ YG   PL  VAN++V
Sbjct: 1   MSEATKL--YEDKMNKTINNLNEEYITIRAGRANPHILDKIKVDYYGQPSPLQSVANISV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R++ +  W+  ++ ++E+ I+ +NLG+ P  +G+ +R+  PE TEERR  L K    
Sbjct: 59  PEARIIQIQPWEAGLIKAIEKEINMANLGVVPNNDGKSIRLVFPELTEERRKELSKDIKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++KI++RNIRRD ++H KK +K+ + +ED +  LE++IQKITD     I+   E+K 
Sbjct: 119 KAEQAKIAIRNIRRDAVEHFKKQQKANEITEDDLKDLEDEIQKITDKFSDEIEKMTEDKT 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMTV 184


>gi|312869006|ref|ZP_07729183.1| ribosome recycling factor [Lactobacillus oris PB013-T2-3]
 gi|311095432|gb|EFQ53699.1| ribosome recycling factor [Lactobacillus oris PB013-T2-3]
          Length = 186

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 117/179 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K +M  +   L++ +  +R G+ + S+L+ VKVE YG+  PLNQVA++T+ E R L
Sbjct: 8   LNDAKQKMKKSGDALQRSLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+ ++  +E+ I+ SNLGL P  +G  +R+ +P+ TE+RR  LVK   A  EKSK
Sbjct: 68  LITPYDESILEEIEKSIYASNLGLTPQNDGSAIRLIIPQLTEDRRKELVKDVKAELEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++VRN+RR+ MD LKK  K+G  ++D    LE  +Q  TD+ IKN++     K+KE++ 
Sbjct: 128 VAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKQVQNETDAGIKNLEDIAAAKEKELLQ 186


>gi|292492491|ref|YP_003527930.1| ribosome recycling factor [Nitrosococcus halophilus Nc4]
 gi|291581086|gb|ADE15543.1| ribosome recycling factor [Nitrosococcus halophilus Nc4]
          Length = 185

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            +   RM  ++  LK+    LR  R   S+LD + V  YG++VPLNQVANV V + R L 
Sbjct: 7   ADAAQRMQKSLEALKQAFAKLRANRAHTSLLDHITVSYYGTNVPLNQVANVAVEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K+MV ++E+ I  S LGLNP+  G V+RIP+P  TEERR  +V+V    AE +++
Sbjct: 67  VTPWEKQMVPAIEKAIRNSELGLNPVTAGMVIRIPLPPLTEERRREMVRVVRQEAEAARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    +K+  K  + SED     E  IQKITDS I  +D     K++++M  
Sbjct: 127 AVRNIRRDSNQTIKELVKEKEISEDDQHRAEEAIQKITDSNIAKVDEILAAKERDLMEV 185


>gi|302386239|ref|YP_003822061.1| ribosome recycling factor [Clostridium saccharolyticum WM1]
 gi|302196867|gb|ADL04438.1| ribosome recycling factor [Clostridium saccharolyticum WM1]
          Length = 184

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 76/181 (41%), Positives = 115/181 (63%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
            LQ  +D+M  T+  L+ + MT+R GR +P +LD ++V+ YG+  P+ QV NV++ E RM
Sbjct: 4   SLQVYEDKMNKTLKALENEFMTIRAGRANPHVLDKIRVDYYGTPTPIQQVGNVSIPEARM 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+  W+K ++ ++E+ I  S LG+NP  +G V+R+  PE TEERR  LVK      E +
Sbjct: 64  IVIQPWEKSLLKAIEKAILTSELGINPTNDGNVIRLVFPELTEERRKDLVKDVKKKGEAA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           KI++RNIRRD  D  KK  K+ + SED  A  E+ IQK+TD  I  ++   EEK K+++ 
Sbjct: 124 KIAIRNIRRDANDAFKKQLKAEEISEDEQAEAEDQIQKLTDKMIDKVEKSVEEKSKDLLT 183

Query: 186 F 186
            
Sbjct: 184 V 184


>gi|257453214|ref|ZP_05618513.1| ribosome recycling factor (RRF) [Fusobacterium sp. 3_1_5R]
 gi|317059748|ref|ZP_07924233.1| ribosome recycling factor [Fusobacterium sp. 3_1_5R]
 gi|313685424|gb|EFS22259.1| ribosome recycling factor [Fusobacterium sp. 3_1_5R]
          Length = 189

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 116/179 (64%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M  TI   K+   ++R GR S +MLD +KVE YGS +PLNQVA V+  E R+L
Sbjct: 8   IQECQNKMQKTIEATKEKFTSIRAGRASVAMLDNIKVEQYGSDMPLNQVATVSAPEARLL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M+  +E+ I  +NLG+NP  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 68  VIDPWDKTMIPKIEKAILAANLGMNPNNDGRVVRLVMPELTADRRKEYVKLAKKEAENGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D    LKK  K  +   SED +   E ++Q +TD TIK++D    +K+KEI
Sbjct: 128 IAVRNIRKDMNTALKKIEKDKESGMSEDELKRFEAEVQTLTDKTIKDLDDLLAKKEKEI 186


>gi|227878826|ref|ZP_03996733.1| ribosome recycling factor [Lactobacillus crispatus JV-V01]
 gi|256843348|ref|ZP_05548836.1| ribosome recycling factor [Lactobacillus crispatus 125-2-CHN]
 gi|256849833|ref|ZP_05555264.1| ribosome-recycling factor [Lactobacillus crispatus MV-1A-US]
 gi|262046921|ref|ZP_06019881.1| ribosome recycling factor [Lactobacillus crispatus MV-3A-US]
 gi|293381207|ref|ZP_06627215.1| ribosome recycling factor [Lactobacillus crispatus 214-1]
 gi|295693144|ref|YP_003601754.1| ribosome-recycling factor [Lactobacillus crispatus ST1]
 gi|227861574|gb|EEJ69186.1| ribosome recycling factor [Lactobacillus crispatus JV-V01]
 gi|256614768|gb|EEU19969.1| ribosome recycling factor [Lactobacillus crispatus 125-2-CHN]
 gi|256713322|gb|EEU28312.1| ribosome-recycling factor [Lactobacillus crispatus MV-1A-US]
 gi|260572903|gb|EEX29463.1| ribosome recycling factor [Lactobacillus crispatus MV-3A-US]
 gi|290922247|gb|EFD99241.1| ribosome recycling factor [Lactobacillus crispatus 214-1]
 gi|295031250|emb|CBL50729.1| Ribosome-recycling factor [Lactobacillus crispatus ST1]
          Length = 185

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/177 (40%), Positives = 118/177 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K +M D+I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IEKAKTKMTDSIKVYQKRLASIRAGVANAALLDNVQVEYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    +AE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKFAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+RRD M+ LKK  K+G  +ED   +LE  +QK+TD   K ID   +EK+KEI
Sbjct: 126 IAVRNVRRDAMNTLKKDEKNGDITEDEQRNLEKQVQKVTDDAAKQIDQLADEKRKEI 182


>gi|227892608|ref|ZP_04010413.1| ribosome recycling factor [Lactobacillus ultunensis DSM 16047]
 gi|227865593|gb|EEJ73014.1| ribosome recycling factor [Lactobacillus ultunensis DSM 16047]
          Length = 185

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/177 (38%), Positives = 118/177 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  ++ M  +I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQENMDKSIKVYQKKLASIRAGVANAALLDNVEVEYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  + ++E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQSSLDNIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+RRD M+ LK+  K+G  +ED   +LE  +QK+TD   K ID   ++K+KEI
Sbjct: 126 IAVRNVRRDAMNSLKRDEKNGDITEDEQRNLEKQVQKVTDDAAKKIDQLADDKRKEI 182


>gi|219683778|ref|YP_002470161.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|254809492|sp|B8DUA6|RRF_BIFA0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219621428|gb|ACL29585.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           AD011]
          Length = 184

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  V+D    K++M  ++   K++   +RTGR +P++L+ + VE YG+  PL  VA + V
Sbjct: 1   MANVVD--QSKEQMKKSVESTKENFAGIRTGRANPALLNGIVVEYYGAPTPLKHVATIGV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR L V+ +D     +VE+ + +S+LG +P   G  + + +PE TE+RR   VK+A +
Sbjct: 59  PEPRTLSVTPFDPSQANAVEKALRDSDLGASPRRNGSAILLTMPELTEDRRKEYVKLAKS 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE  K++VRNIRR   + + K+ K G+  ED    L  ++ K+T +T   +D+  E K+
Sbjct: 119 KAEDGKVAVRNIRRKSKEAIDKAVKDGEMGEDEGDRLLKELDKVTKATTDELDALLEAKQ 178

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 179 KEIMEV 184


>gi|296127609|ref|YP_003634861.1| ribosome recycling factor [Brachyspira murdochii DSM 12563]
 gi|296019425|gb|ADG72662.1| ribosome recycling factor [Brachyspira murdochii DSM 12563]
          Length = 182

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 80/176 (45%), Positives = 113/176 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ KDRM   IS L+ D+  +RTGR + S+LD VKVEAYGS++PL QV NV+  + R ++
Sbjct: 4   ESYKDRMEKAISSLQNDLKGIRTGRANASILDGVKVEAYGSNMPLKQVGNVSTPDSRTIM 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK +V+ +E+ I +++LG NP  +G  +RI VPE T+ERR  L K      E++KI
Sbjct: 64  IQPFDKGLVSDIEKAILKADLGFNPFNDGGNIRIVVPELTKERREELKKGVRHRGEEAKI 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +VRNIRRD  D +KK  K    +ED   S E  IQ  TD+ IK ID     K+KE+
Sbjct: 124 AVRNIRRDENDKIKKELKDKTITEDESKSQEKRIQNETDAYIKKIDEMINTKEKEL 179


>gi|227904185|ref|ZP_04021990.1| ribosome recycling factor [Lactobacillus acidophilus ATCC 4796]
 gi|227868204|gb|EEJ75625.1| ribosome recycling factor [Lactobacillus acidophilus ATCC 4796]
          Length = 185

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 73/177 (41%), Positives = 118/177 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D MG +I   +K + ++R G  + ++LD V+VE YG+  PL Q+++VT+ EPR+L
Sbjct: 6   IKKAQDNMGKSIKVYQKKLASVRAGVANAALLDNVQVEYYGAPTPLTQMSSVTIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTSERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+RR+ MD LKK  K+G  +ED   +LE  +QK+TD   K ID   +EK+KEI
Sbjct: 126 IAVRNVRREAMDSLKKEEKNGDITEDEQRNLEKQVQKVTDDATKKIDQLADEKRKEI 182


>gi|86156709|ref|YP_463494.1| ribosome recycling factor [Anaeromyxobacter dehalogenans 2CP-C]
 gi|123499108|sp|Q2IMM1|RRF_ANADE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|85773220|gb|ABC80057.1| ribosome recycling factor [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 188

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 72/188 (38%), Positives = 114/188 (60%), Gaps = 2/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M  + D  L ++  R+  T+  L+ D+  +RTGR S  +LD V+V+ YG+  PLNQVA +
Sbjct: 1   MGTIADDILGDLHGRILKTLDQLRTDLSAVRTGRASLHLLDNVRVDYYGTPTPLNQVATM 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +V E R++VV  W+K M+  +E+ I E+NLGLNP+ +  ++R+P+P  TEERR  +VK  
Sbjct: 61  SVPEARLIVVKPWEKSMIPPIEKAIREANLGLNPMSDKDLVRVPIPALTEERRKEIVKQV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E+ KI+VRN+RR+  + ++ + K G  S D        +QK TD  +K ID     
Sbjct: 121 KHKGEEHKIAVRNVRREAKELIEVAEKDGDISGDDAEKALEKMQKETDDGVKKIDEIVAA 180

Query: 179 KKKEIMHF 186
           K+K+++  
Sbjct: 181 KEKDVLQV 188


>gi|157364644|ref|YP_001471411.1| ribosome recycling factor [Thermotoga lettingae TMO]
 gi|166991560|sp|A8F863|RRF_THELT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157315248|gb|ABV34347.1| ribosome recycling factor [Thermotoga lettingae TMO]
          Length = 185

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++N +DRM   +  + +++  +RTGR SP++L+ +KV+ YG+  P++Q+A V + E R L
Sbjct: 6   VKNAEDRMNKAVEKISEELRKMRTGRPSPAILEEIKVDYYGAQTPISQLATVNITEDRAL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD+ +++S+E+ I  S+LGL P  +G V+R+  P  T E+R    K A   AE+ K
Sbjct: 66  IIKPWDRSVLSSIEKAIFASDLGLTPQNDGNVIRLTFPTPTTEQRQKWAKKAKEIAEQGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD +  LK   K GK SED    +E +IQ +TD  I  ID   E+K+KEIM  
Sbjct: 126 IAIRNIRRDILKELKGDTKDGKISEDDEKRIEKEIQDLTDKKILEIDKLLEKKEKEIMEV 185


>gi|110636998|ref|YP_677205.1| ribosome recycling factor [Cytophaga hutchinsonii ATCC 33406]
 gi|123163830|sp|Q11XK1|RRF_CYTH3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110279679|gb|ABG57865.1| ribosome recycling factor [Cytophaga hutchinsonii ATCC 33406]
          Length = 186

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 74/187 (39%), Positives = 111/187 (59%), Gaps = 2/187 (1%)

Query: 1   MNQV-IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M ++ + L + KD M   I   + ++  +R G+ SP+M D + V+ YGS  PL QVA V+
Sbjct: 1   MEEINLYLDDAKDSMQKAIKHTELELSKIRAGKASPNMFDGIMVDYYGSSTPLAQVATVS 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           V EPR + +  ++K MV ++E+ I ++N+G NP  +G V+RI VP  TEERR  LVK   
Sbjct: 61  VPEPRSITIKAYEKSMVTTIEKAIRDANMGFNPQNDGDVIRINVPPLTEERRRDLVKQTK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A  E  K+ +R IR++  D LKK  K G ASED V   E  +Q +T+ T   +++    K
Sbjct: 121 AEGESGKVRIRKIRQETNDELKKLLKDG-ASEDEVKRAEEVVQALTNDTSAKLEALIAAK 179

Query: 180 KKEIMHF 186
           +KE+M  
Sbjct: 180 EKELMTV 186


>gi|293189848|ref|ZP_06608562.1| ribosome recycling factor [Actinomyces odontolyticus F0309]
 gi|292821263|gb|EFF80208.1| ribosome recycling factor [Actinomyces odontolyticus F0309]
          Length = 185

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 59/180 (32%), Positives = 101/180 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +     +   +RTGR + SM + + V+ YG+  P+ Q+A+  + E R +
Sbjct: 6   LLEAEEKMDKAVEAASHEFSNIRTGRATSSMFEQLLVDYYGAPTPMQQLASFQIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D+     + R + ES+LG+NP  +G V+R+ +P  TEERR   VK A + AE  +
Sbjct: 66  LISPFDRTATQEIIRTLRESDLGVNPTDDGNVVRVVLPALTEERRKEYVKQAKSKAEDGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVR +RR   D L + +K G+ASED V   E  +  +T +  + ID     K+ E++  
Sbjct: 126 VSVRGVRRKAKDQLDRLKKDGEASEDDVERAEKQLDGLTKAHTEQIDKMLATKESELLTI 185


>gi|256544891|ref|ZP_05472262.1| ribosome recycling factor [Anaerococcus vaginalis ATCC 51170]
 gi|256399390|gb|EEU12996.1| ribosome recycling factor [Anaerococcus vaginalis ATCC 51170]
          Length = 185

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ +  M       +  +  +R GR + S+LD +    YG+  P+NQ A ++  EPR+L
Sbjct: 6   IKDTEASMKKACESFEIRISKIRAGRANDSILDGITFSYYGTQTPINQAATISTPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  +  +E+ I++S+LG+NP  +G+V+R+P P  TEERR  L K    Y+E SK
Sbjct: 66  VIKPWDKSNIKEIEKAINKSDLGINPQNDGEVIRLPFPALTEERRKELTKQVSEYSEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +RNIRRD MD  KK+ KS   +ED + S+E DIQKIT   I  ++   E K KE++  
Sbjct: 126 IQIRNIRRDSMDIAKKAEKSADLTEDDLFSIEEDIQKITKKYIDKVEKTVESKNKELLEV 185


>gi|223038376|ref|ZP_03608670.1| ribosome recycling factor [Campylobacter rectus RM3267]
 gi|222880233|gb|EEF15320.1| ribosome recycling factor [Campylobacter rectus RM3267]
          Length = 185

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 67/186 (36%), Positives = 112/186 (60%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   +  K+     I  LK+D  TLRTG+V+ S++D + V+ YGS  PLNQVA +  
Sbjct: 2   LNEIY--KKQKEHSDKCIEGLKRDFSTLRTGKVNISIVDNIYVDYYGSQTPLNQVATILT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++   I  +N+G+NP  +G+ +++  P  T E+R    K A A
Sbjct: 60  SDASTISITPWEKPMLKTITAAISAANIGVNPNNDGESVKLFFPPMTVEQRHENAKHAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + EK+K+S+RNIR+D  D +KK  K    +ED     ++++QKITDS    IDS  +EK+
Sbjct: 120 FGEKAKVSIRNIRKDANDEVKKLEKDKSITEDESKKGQDEVQKITDSYTSKIDSLVKEKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 SELLKV 185


>gi|148656147|ref|YP_001276352.1| ribosome recycling factor [Roseiflexus sp. RS-1]
 gi|166231220|sp|A5UUU9|RRF_ROSS1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|148568257|gb|ABQ90402.1| ribosome recycling factor [Roseiflexus sp. RS-1]
          Length = 185

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM      L+  + T+RTGR SP++++ + VEAYG+ +PLNQ+A +TV EPR+L
Sbjct: 6   LREAESRMKKATEALRNHLATIRTGRASPALVEHLHVEAYGATLPLNQLATITVPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   V ++ + I  S LG+ P  +G+V+R+ +P+ TE RR  L K+  A  E+SK
Sbjct: 66  VIQPFDANTVKAISKAIMNSELGITPTDDGRVIRLAIPQLTEARRKELTKLVRARVEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR+ ++ L+        SED     +  +Q++TD  ++ +D     K+ E+M  
Sbjct: 126 IALRNIRREALEDLRDLEHEKMISEDEHRRAQEKLQELTDRFVRELDHIGATKEAEVMEI 185


>gi|325957056|ref|YP_004292468.1| ribosome recycling factor [Lactobacillus acidophilus 30SC]
 gi|325333621|gb|ADZ07529.1| ribosome recycling factor [Lactobacillus acidophilus 30SC]
          Length = 185

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/177 (38%), Positives = 116/177 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  ++ M  +I   +K + ++R G  + ++LD V+V+ YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQENMDKSIKVYQKKLASIRAGVANAALLDNVQVQYYGAPTPLTQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+RRD M+ LK+  K G  +ED   +LE  +QK+TD   K ID   +EK+KEI
Sbjct: 126 IAVRNVRRDAMNSLKREEKDGDITEDEQRNLEKQVQKVTDDAAKKIDQLADEKRKEI 182


>gi|301059177|ref|ZP_07200117.1| ribosome recycling factor [delta proteobacterium NaphS2]
 gi|300446725|gb|EFK10550.1| ribosome recycling factor [delta proteobacterium NaphS2]
          Length = 185

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/186 (38%), Positives = 119/186 (63%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M + I L  ++ +M   +  LKKD   +RTGR S ++LD +KV+ Y + +P++QVA +  
Sbjct: 1   MKEEI-LAELRQKMNKAVEALKKDFRKIRTGRASTALLDGIKVDCYDTQMPIDQVATIAA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R++ +  WD+ ++ ++E+ I +S LGL P+ +G+++RI +P  TEERR  L K+A  
Sbjct: 60  PESRLITIQPWDQSIMGNLEKSILKSELGLTPMNDGKMIRISIPPLTEERRKELAKLARK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE +KIS+RN RR+  D  K+ +   + SED +   ++D+QKITD  I+ +D    +K+
Sbjct: 120 MAEDNKISIRNFRREANDMFKELKAEKEISEDELFKSQDDVQKITDEFIQKVDETTAKKE 179

Query: 181 KEIMHF 186
           +EI+ F
Sbjct: 180 QEIIEF 185


>gi|116072186|ref|ZP_01469453.1| ribosome releasing factor [Synechococcus sp. BL107]
 gi|116064708|gb|EAU70467.1| ribosome releasing factor [Synechococcus sp. BL107]
          Length = 182

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 63/179 (35%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++++  M  ++   +++  T+RTGR + S+LD + VE YG+  PL  +A ++  + + + 
Sbjct: 4   KDLEASMHKSLEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQ 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D   +AS+E+ I  S LG  P  +G+V+RI VP  TEERR    K+A  YAE+ K+
Sbjct: 64  IQPFDISALASIEKAIAMSELGFTPNNDGKVIRINVPPLTEERRKEFCKLASRYAEEGKV 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD +D +KK  K G  SED     ++ IQK+ D  I  ++    EK+  I+  
Sbjct: 124 ALRNLRRDAIDKVKKQEKDGDFSEDQSRDEQDSIQKVLDKNIVALEKQLAEKEAAILKV 182


>gi|259501578|ref|ZP_05744480.1| ribosome recycling factor [Lactobacillus iners DSM 13335]
 gi|302191448|ref|ZP_07267702.1| ribosome recycling factor [Lactobacillus iners AB-1]
 gi|309804225|ref|ZP_07698302.1| ribosome recycling factor [Lactobacillus iners LactinV 11V1-d]
 gi|309805502|ref|ZP_07699547.1| ribosome recycling factor [Lactobacillus iners LactinV 09V1-c]
 gi|309807192|ref|ZP_07701166.1| ribosome recycling factor [Lactobacillus iners LactinV 03V1-b]
 gi|309808808|ref|ZP_07702693.1| ribosome recycling factor [Lactobacillus iners LactinV 01V1-a]
 gi|309809446|ref|ZP_07703304.1| ribosome recycling factor [Lactobacillus iners SPIN 2503V10-D]
 gi|312875782|ref|ZP_07735774.1| ribosome recycling factor [Lactobacillus iners LEAF 2053A-b]
 gi|315653424|ref|ZP_07906346.1| ribosome recycling factor [Lactobacillus iners ATCC 55195]
 gi|325911800|ref|ZP_08174204.1| ribosome recycling factor [Lactobacillus iners UPII 143-D]
 gi|325913480|ref|ZP_08175846.1| ribosome recycling factor [Lactobacillus iners UPII 60-B]
 gi|329919873|ref|ZP_08276811.1| ribosome recycling factor [Lactobacillus iners SPIN 1401G]
 gi|259167096|gb|EEW51591.1| ribosome recycling factor [Lactobacillus iners DSM 13335]
 gi|308163628|gb|EFO65898.1| ribosome recycling factor [Lactobacillus iners LactinV 11V1-d]
 gi|308165153|gb|EFO67391.1| ribosome recycling factor [Lactobacillus iners LactinV 09V1-c]
 gi|308166413|gb|EFO68618.1| ribosome recycling factor [Lactobacillus iners LactinV 03V1-b]
 gi|308167934|gb|EFO70067.1| ribosome recycling factor [Lactobacillus iners LactinV 01V1-a]
 gi|308170118|gb|EFO72153.1| ribosome recycling factor [Lactobacillus iners SPIN 2503V10-D]
 gi|311088686|gb|EFQ47138.1| ribosome recycling factor [Lactobacillus iners LEAF 2053A-b]
 gi|315489349|gb|EFU78989.1| ribosome recycling factor [Lactobacillus iners ATCC 55195]
 gi|325476306|gb|EGC79468.1| ribosome recycling factor [Lactobacillus iners UPII 143-D]
 gi|325477249|gb|EGC80395.1| ribosome recycling factor [Lactobacillus iners UPII 60-B]
 gi|328936963|gb|EGG33393.1| ribosome recycling factor [Lactobacillus iners SPIN 1401G]
          Length = 185

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 75/183 (40%), Positives = 123/183 (67%), Gaps = 1/183 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ VI ++  K  M  +IS  +K++  +R G  + S+LD +KVE YG   PL Q++++T+
Sbjct: 1   MSNVI-IEKAKANMSKSISVFEKELGGIRAGVANASLLDGIKVEYYGVPTPLTQMSSITI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+++ +DK  + ++E  I  S+LG+ P  +G V+RI +P+ T ERR+ + K    
Sbjct: 60  PEARVLMITPFDKTTLNNIEHAILASDLGITPANDGSVVRIVIPQLTGERRIEIAKKVGK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++KI++RNIRR+GMD LKK +K G+ +ED +   E D+QKITD+  K++D+  ++K 
Sbjct: 120 LAEQAKIAIRNIRREGMDALKKQQKDGEITEDDLHKFEKDMQKITDNATKDVDALADKKS 179

Query: 181 KEI 183
           KEI
Sbjct: 180 KEI 182


>gi|7404451|sp|P37706|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
           AltName: Full=Nuclear located protein D2; AltName:
           Full=Ribosome-releasing factor, chloroplastic; Flags:
           Precursor
          Length = 227

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +++K+RM  TI  +K    ++RT R +P MLD +KVE YG+   L  +A ++  +   L+
Sbjct: 49  KSVKERMEKTIENVKASFNSIRTXRSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLL 108

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +DK  +  +E+ I  S+LG+ P  +G V+R+ +P+ T +RR  L K+    AE+ K+
Sbjct: 109 VNPYDKSSLKDIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKV 168

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +    K  K  K SED V  L +D+QK+ D  IK +DS F++K+KE+M  
Sbjct: 169 ALRNIRRDAIKSYDKLEKEKKLSEDNVKDLSSDLQKVIDEYIKKVDSIFKQKEKELMTV 227


>gi|262066278|ref|ZP_06025890.1| ribosome recycling factor [Fusobacterium periodonticum ATCC 33693]
 gi|291379973|gb|EFE87491.1| ribosome recycling factor [Fusobacterium periodonticum ATCC 33693]
          Length = 190

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+   ++R GR + +MLD VKVE YGS VPLNQ+ +V+  E R+L
Sbjct: 9   IKECEEKMLKTIESVKERFTSIRAGRANVAMLDGVKVENYGSDVPLNQIGSVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  +E+ +  +NLG+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VIDPWDKTLIPKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK  K  +   SED +   E  +Q +TD  IK ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEETHVQTLTDKYIKEIDELLAKKEKEI 187


>gi|224499896|ref|ZP_03668245.1| ribosome recycling factor [Listeria monocytogenes Finland 1988]
          Length = 172

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 69/165 (41%), Positives = 110/165 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K++M      L + + T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6   LSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K
Sbjct: 66  LITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
           ++VRNIRR+  + LKK  K+G  +ED + S   D+QK+TD +IK 
Sbjct: 126 VAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKK 170


>gi|88798260|ref|ZP_01113846.1| ribosome recycling factor [Reinekea sp. MED297]
 gi|88779036|gb|EAR10225.1| ribosome recycling factor [Reinekea sp. MED297]
          Length = 185

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 104/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  +      I+ L      +RTGR +P++LD + V+ YG+  P+ QVAN+ V + R L 
Sbjct: 7   QETETHNRKAIAALDDAFNKIRTGRANPAILDKISVDYYGTDTPIKQVANIIVEDGRTLS 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  W+K MV  VE+ I +S+LGLNP   G  +RI +P  TEE R   +KVA   AEK+++
Sbjct: 67  IVPWEKNMVPEVEKAIMKSDLGLNPATAGSNIRIVMPMLTEETRKEFIKVARGEAEKARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN RRD    +K+  K  + SED     E DIQK+TD+ I  +D    EK+ ++M  
Sbjct: 127 SIRNGRRDANSAVKELVKEKELSEDEGKRAEEDIQKLTDAAIAQVDKHLTEKEADLMKV 185


>gi|296274577|ref|YP_003657208.1| ribosome recycling factor [Arcobacter nitrofigilis DSM 7299]
 gi|296098751|gb|ADG94701.1| ribosome recycling factor [Arcobacter nitrofigilis DSM 7299]
          Length = 185

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 61/186 (32%), Positives = 111/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++      K++M + I  LK+D  TLRTG+VS ++LD +K++ YG+   L QV +V  
Sbjct: 2   LNEIY--SETKEKMDNAIEALKRDYKTLRTGKVSTTILDGIKIDYYGTPTELTQVGSVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   +V++ W+K +V  +E+ I  +N+G+NP  +G+V+++  P  T ++R    K A  
Sbjct: 60  PDATTIVINPWEKHLVGDIEKAIQNANIGVNPNNDGEVIKLFFPPMTVDQRKESAKQAKG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             + +K+++RNIR+   D +K   K  + ++D     +++IQKITDS +   D  F+ K+
Sbjct: 120 MTDDAKVAIRNIRKHANDRVKVLHKDKEITDDENKKAQDEIQKITDSYVTKADDTFKAKE 179

Query: 181 KEIMHF 186
            EI+  
Sbjct: 180 AEILKV 185


>gi|305665271|ref|YP_003861558.1| ribosome releasing factor [Maribacter sp. HTCC2170]
 gi|88710025|gb|EAR02257.1| ribosome releasing factor [Maribacter sp. HTCC2170]
          Length = 185

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 76/188 (40%), Positives = 106/188 (56%), Gaps = 5/188 (2%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I   L   K+ M   I+ L+K+ + +R G+ +P+ML  V V+ YGS  PL+QVAN+
Sbjct: 1   MNEEIKFILDATKESMDAAITHLEKEFVKIRAGKANPAMLSSVMVDYYGSQTPLSQVANI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R L V  W+K M+  +E  I  +NLG NP+  G  + I VP  TEERR+ L K A
Sbjct: 61  NTPDGRTLSVQPWEKNMLQEIETAIMHANLGFNPMNNGDFVIINVPPLTEERRIQLAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE +K+  RN R++    +K       ASEDM  + E D+Q +TD   K ID F   
Sbjct: 121 KAEAEHAKVGARNARQEANKEIKDL---DDASEDMKKNAEMDVQDLTDKYSKKIDDFLAA 177

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 178 KEAEIMKV 185


>gi|154509155|ref|ZP_02044797.1| hypothetical protein ACTODO_01676 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798789|gb|EDN81209.1| hypothetical protein ACTODO_01676 [Actinomyces odontolyticus ATCC
           17982]
          Length = 185

 Score =  218 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 58/180 (32%), Positives = 101/180 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +     +   +RTGR + +M + + V+ YG+  P+ Q+A+  + E R +
Sbjct: 6   LLEAEEKMDKAVEAASHEFSNIRTGRATSAMFEQLLVDYYGAPTPMQQLASFQIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D+     + R + ES+LG+NP  +G V+R+ +P  TEERR   VK A + AE  +
Sbjct: 66  LISPFDRTATQEIIRTLRESDLGVNPTDDGNVVRVVLPALTEERRKEYVKQAKSKAEDGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVR +RR   D L + +K G+ASED V   E  +  +T +  + ID     K+ E++  
Sbjct: 126 VSVRGVRRKAKDQLDRLKKDGEASEDDVERAEKQLDGLTKAHTEQIDKMLATKESELLTI 185


>gi|198283287|ref|YP_002219608.1| ribosome recycling factor [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667967|ref|YP_002425875.1| ribosome recycling factor [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198247808|gb|ACH83401.1| ribosome recycling factor [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218520180|gb|ACK80766.1| ribosome recycling factor [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 186

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  +I  LK ++  LRTGR S  +LD V+++ YG+  PL QVA+V+V + R L+
Sbjct: 8   KDSEARMKKSIESLKGELTRLRTGRASAGLLDHVQLDYYGAPTPLAQVASVSVADARSLL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K ++  +++ I ++ LGLNP+     +R+P+P  +EERR  +VKV     E +++
Sbjct: 68  VTPWEKNLIPKIDKAIRDAGLGLNPVAGSDNVRVPLPALSEERRKEMVKVVRQEGEGARV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD +  +K+  K    SED     E + QK+TD  I  +D+  E K+ ++M  
Sbjct: 128 AIRNIRRDSISQVKELHKQKAISEDEERRAEEEFQKLTDRYIDEVDAVVEAKEADLMEV 186


>gi|255321712|ref|ZP_05362867.1| ribosome recycling factor [Campylobacter showae RM3277]
 gi|255301192|gb|EET80454.1| ribosome recycling factor [Campylobacter showae RM3277]
          Length = 185

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 112/186 (60%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   +  K+     I  LK+D  TLRTG+V+ S++D + V+ YGS  PLNQVA V  
Sbjct: 2   LNEIY--KKQKEHSDKCIEGLKRDFTTLRTGKVNISIVDNIYVDYYGSQTPLNQVATVLT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++   I  +N+G+NP  +G+ +++  P  T E+R    K A A
Sbjct: 60  SDASTISITPWEKPMLKTITAAISAANIGVNPNNDGESVKLFFPPMTVEQRQENAKHAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + EK+K+S+RNIR+D  D +KK  K    +ED     ++++QKITDS    IDS  +EK+
Sbjct: 120 FGEKAKVSIRNIRKDANDEVKKLEKDKTITEDESKKGQDEVQKITDSYTSKIDSLVKEKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 NELLKV 185


>gi|327183779|gb|AEA32226.1| ribosome recycling factor [Lactobacillus amylovorus GRL 1118]
          Length = 185

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 69/177 (38%), Positives = 116/177 (65%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  ++ M  +I   +K + ++R G  + ++LD V+VE YG+  PL Q++++T+ EPR+L
Sbjct: 6   IKKAQENMDKSIKVYQKKLASIRAGVANAALLDNVQVEYYGAPTPLIQMSSITIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTGERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRN+RRD M+ LK+  K G  +ED   +LE  +QK+TD   K ID   +EK+KEI
Sbjct: 126 IAVRNVRRDAMNSLKREEKDGDITEDEQRNLEKQVQKVTDGAAKKIDQLADEKRKEI 182


>gi|255327231|ref|ZP_05368305.1| ribosome recycling factor [Rothia mucilaginosa ATCC 25296]
 gi|255295511|gb|EET74854.1| ribosome recycling factor [Rothia mucilaginosa ATCC 25296]
          Length = 185

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 55/180 (30%), Positives = 102/180 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  TI   K +   +RTGRV+P++   +  E YG+  PL Q+ +  V + R +
Sbjct: 6   LAEAGEKMEKTIEATKTEFAKVRTGRVNPAIFSGLTAEYYGAPTPLQQLVSFNVEDARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D   +A++E+ + +S+LG+NP  +G  +R+ +PE T ERR    K+ ++ AE+S+
Sbjct: 66  KIVPFDVTALAAIEKALRDSDLGVNPSNDGAAIRVVMPEMTAERRKEYTKLVNSKAEESR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN+RR     + K  K  +  ED  A  E ++  +T   I  +D+ ++ K+ E++  
Sbjct: 126 VSIRNVRRHAKTAIDKLVKDSEIGEDEGARAEKELDALTKKHIDQVDALYKHKEAELLEV 185


>gi|119717464|ref|YP_924429.1| ribosome recycling factor [Nocardioides sp. JS614]
 gi|166230809|sp|A1SLQ7|RRF_NOCSJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119538125|gb|ABL82742.1| ribosome recycling factor [Nocardioides sp. JS614]
          Length = 185

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L     +M  ++   +++   +R GRV+PSM + + V+ YGS  PL Q+A+ T  E R++
Sbjct: 6   LNEADGKMDKSVEATREEFAAIRAGRVNPSMFNKIVVDYYGSPTPLQQLASFTAPEARII 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  + ++ + I +S+LG+NP  +G+V+R   PE TEERR   +K++   AE+ +
Sbjct: 66  LIAPYDQGAMHNILKAIRDSDLGVNPADDGKVIRCVFPELTEERRKEYIKISRHKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RR    HL++  K G+  +D +   E  +  +T      ID   + K+ E++  
Sbjct: 126 VAVRNLRRTAKQHLERLEKDGEVGQDDLTGAEKRLDGLTKKHTDAIDEMLKHKEAELLEV 185


>gi|222100166|ref|YP_002534734.1| Ribosome recycling factor [Thermotoga neapolitana DSM 4359]
 gi|254809538|sp|B9K8T5|RRF_THENN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|221572556|gb|ACM23368.1| Ribosome recycling factor [Thermotoga neapolitana DSM 4359]
          Length = 185

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M  T+  ++ ++  +RTG+ SP++L+ +KV+ YG   P+NQ+A ++V E R L
Sbjct: 6   IKEAKEKMKKTLEKIEDELKKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISVSEERTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD+ +++ +E+ I+ S+LGLNP+ +G V+R+  P  T E+R   VK A    E+ K
Sbjct: 66  VIKPWDRSVLSLIEKAINASDLGLNPVNDGNVIRLVFPTPTTEQREKWVKKAKEIVEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR+ M  +K+ +K G   ED    LEN++QK+TD  I+ +D  FE KKKEIM F
Sbjct: 126 IAIRNIRREIMKKIKEDQKEGNIPEDDARRLENEVQKLTDEFIEKLDEVFEIKKKEIMEF 185


>gi|325955634|ref|YP_004239294.1| ribosome-recycling factor [Weeksella virosa DSM 16922]
 gi|323438252|gb|ADX68716.1| Ribosome-recycling factor [Weeksella virosa DSM 16922]
          Length = 184

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 107/180 (59%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K++M  T+  L      LR G+ SP+ML  VK++ YGS  PL+QVAN+   +   +
Sbjct: 8   IAQAKEQMQKTMEHLDNAFGKLRAGKASPAMLSTVKIDYYGSVTPLSQVANINTPDAMTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  W++ ++  +E+ I  SNLG  P   G ++ I +P  TEERR  L K+A A AE +K
Sbjct: 68  SVQPWERNLIGEIEKAIINSNLGFAPSNNGDMIIINIPPLTEERRKELSKLAKAEAEHAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN R+D  ++LK        SED+V   ENDIQ +TD+ IKNID  F +K+ EIM  
Sbjct: 128 VSIRNARKDANNNLKNI---KDISEDVVKGYENDIQDLTDNYIKNIDVAFAKKESEIMKV 184


>gi|229820990|ref|YP_002882516.1| ribosome recycling factor [Beutenbergia cavernae DSM 12333]
 gi|259494534|sp|C5BWT8|RRF_BEUC1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229566903|gb|ACQ80754.1| ribosome recycling factor [Beutenbergia cavernae DSM 12333]
          Length = 185

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 58/180 (32%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M   +   + ++  +RTGR + ++   + V+ YG+  PL Q+A +T+ E R++
Sbjct: 6   LLEAEDKMDKAVEVARDELGAIRTGRANAALFQKILVDYYGAPTPLQQLAGITIPEARVI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+   + +E+ +  S+LG+NP  +G V+RI +P+ TEERR   VK+A    E ++
Sbjct: 66  LINPYDRGAASEIEKALRASDLGVNPSDDGNVIRIVLPQLTEERRREYVKLAKGKGEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVR +RR   D L +  + G+A ED VA  E +++  T S +  ID     K++E++  
Sbjct: 126 VSVRAVRRKAKDELDRIVRDGEAGEDEVARAEKELELATKSHVDAIDDLLSHKERELLEV 185


>gi|213962598|ref|ZP_03390860.1| ribosome recycling factor [Capnocytophaga sputigena Capno]
 gi|213954924|gb|EEB66244.1| ribosome recycling factor [Capnocytophaga sputigena Capno]
          Length = 184

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 70/188 (37%), Positives = 108/188 (57%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  L    + M + +  L K +  +R G+ SP M+  V V+ YG+  PL+QVANV
Sbjct: 1   MNEEINIILDTTNEAMQEALQHLDKALGNIRAGKASPQMVSSVMVDYYGAQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +  + R + +  W+K+M+  +E+ I  +NLG NP+  G+++ I VP  TEERR  LVK A
Sbjct: 61  SAPDSRTISIQPWEKKMIQPIEKAIQIANLGFNPMNNGEMVIITVPPLTEERRRELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E +KISVRN R+D    +KK     + S+D+    E  +QK+TD  IK ++     
Sbjct: 121 KGEGEDAKISVRNARQDANKEIKKV----ETSDDIKKDAEERVQKLTDKYIKKVEEVLAA 176

Query: 179 KKKEIMHF 186
           K+ EI+  
Sbjct: 177 KEAEILKV 184


>gi|289706653|ref|ZP_06503001.1| ribosome recycling factor [Micrococcus luteus SK58]
 gi|289556573|gb|EFD49916.1| ribosome recycling factor [Micrococcus luteus SK58]
          Length = 185

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ +++M  TI   ++D  ++RTGR +P +   V V+ YGS  PL Q+A+ T  + R L
Sbjct: 6   LQSAEEQMDRTIEATREDFASVRTGRANPGLYSKVMVDYYGSFTPLQQLASFTTTDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  + ++E+ + ES +G NP  +G+V+RI +PE T ERR   VK+  + AE+ K
Sbjct: 66  LITPFDQSALRNIEKALSESEVGANPSNDGKVIRIVMPELTAERRKEYVKLVKSKAEEHK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ISVRN RR   + + K+ K G+  ED  A  E ++  +T   ++ ID   + K++E++  
Sbjct: 126 ISVRNARRKAKEAMDKAVKDGEVGEDEGARGEKELDALTKRHVELIDEMAKNKEQELLEV 185


>gi|227484637|ref|ZP_03914953.1| ribosome recycling factor [Anaerococcus lactolyticus ATCC 51172]
 gi|227237357|gb|EEI87372.1| ribosome recycling factor [Anaerococcus lactolyticus ATCC 51172]
          Length = 186

 Score =  217 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 114/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +  M  T+   +K + T++ GR + ++LD +    YG+  P+NQ A V++ E R+LV
Sbjct: 8   KETEVGMQKTVDSFEKRIATIKAGRATEAILDGITFSYYGTETPINQAATVSIPEARLLV 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +  +E+ I +SN+G+ P  +G+++R+P P  TE+RR    K  + YAE +KI
Sbjct: 68  IKPWDKNNIGPIEKAILKSNIGITPGNDGEIIRLPFPALTEDRRKEYTKEVNTYAEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            VRN+RRD MD +KKS KSG  +ED    LE++IQK+TD  IK I+   E+K KE+M+ 
Sbjct: 128 VVRNVRRDSMDEVKKSEKSGDITEDDRYKLEDEIQKVTDKFIKTIEEMTEKKNKELMNV 186


>gi|332519130|ref|ZP_08395597.1| ribosome recycling factor [Lacinutrix algicola 5H-3-7-4]
 gi|332044978|gb|EGI81171.1| ribosome recycling factor [Lacinutrix algicola 5H-3-7-4]
          Length = 185

 Score =  217 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 79/188 (42%), Positives = 111/188 (59%), Gaps = 5/188 (2%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I   + + K+ M   I  LKK  + +R G+ SP+ML  V V+ YGS  PL+QVANV
Sbjct: 1   MNEDIQFIIDSAKESMDAAIEHLKKQFLNIRAGKASPAMLGSVVVDYYGSKTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + +  W+K M+  +E+ I  +NLG NP+  G+ L I VP  TEERRL L K A
Sbjct: 61  NTPDGRTITIQPWEKGMIQEIEKAIMIANLGFNPMNNGESLIINVPPLTEERRLQLGKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE +K+ VRN R+D  + +KK      ASED+  + E DIQ++T+ ++K ID     
Sbjct: 121 KAEAEDAKVGVRNARKDANNDIKKV---DDASEDLQKNAEADIQELTNKSVKKIDELLAN 177

Query: 179 KKKEIMHF 186
           K  EIM  
Sbjct: 178 KDAEIMTV 185


>gi|269792356|ref|YP_003317260.1| ribosome recycling factor [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099991|gb|ACZ18978.1| ribosome recycling factor [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 185

 Score =  217 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 121/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ +K +   TI  LK  ++ +RTGR  P++++ +KV+ +G+  P+ Q+  VTV EPR L
Sbjct: 6   IKEMKQKTEKTIEHLKGTLLGIRTGRAHPALVEEIKVDYFGTMTPIKQMGTVTVPEPRQL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK  + ++E+ I  S+LG+ P  +G+ +R+ +PE T+ERR  L K+ + YAE+++
Sbjct: 66  VITPWDKSALKAIEKAIQSSSLGVTPKTDGESVRVVLPELTKERRQELSKLVNKYAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RRD ++  KK  K+G+ SED    L+ ++Q   D  IK +D+  +EK+KEI++
Sbjct: 126 VAIRNVRRDVLEAFKKMEKAGEISEDEHKKLQKEVQDHVDGAIKKVDALAQEKEKEILN 184


>gi|219130047|ref|XP_002185186.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403365|gb|EEC43318.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 173

 Score =  217 bits (555), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 66/173 (38%), Positives = 108/173 (62%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++  ++ ++ ++RTGR S  +LD VKV+ YG   PLNQ+A ++V   + L +  +DK
Sbjct: 1   MAKSVDSVRLNLQSVRTGRASAQILDRVKVDYYGVETPLNQMATISVPSAQQLSIDPYDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + ++E  I ES+LGL    +G ++RI +P  TE+RR  ++K+  +  E+ K++VRNIR
Sbjct: 61  TSLNNIETAIVESDLGLTTNNDGSIIRINIPSMTEDRRKEMLKLCKSIGEEGKVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RDG+D +KK  KS    ED +   ++ +QK+TD  +K ID     K+KE+M  
Sbjct: 121 RDGLDTIKKMEKSSDIGEDEMKDGQDTMQKLTDKNVKEIDEVVGAKEKEVMKV 173


>gi|120434469|ref|YP_860171.1| ribosome recycling factor [Gramella forsetii KT0803]
 gi|166230790|sp|A0LXJ3|RRF_GRAFK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|117576619|emb|CAL65088.1| ribosome recycling factor [Gramella forsetii KT0803]
          Length = 183

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 79/187 (42%), Positives = 113/187 (60%), Gaps = 5/187 (2%)

Query: 1   MNQV-IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M++V   L+  K+ M   I+ LKK +  +R G+ SPSML  V VE YGS  PL QVANV 
Sbjct: 1   MDEVEFILEEAKEGMEKAITHLKKQLSNIRAGKASPSMLGSVMVEYYGSQTPLQQVANVN 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R L +  ++K ++  +ERGI  +NLG NP+  G+ + I VP  TEERR  L K A 
Sbjct: 61  TPDARTLSIQPFEKSLITEIERGIMLANLGFNPMNNGESVIINVPPLTEERRKQLSKQAK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A AE +K+ VRN R+  M  LKK+      SED++ S E+++Q++T++ I+ ID     K
Sbjct: 121 AEAEDAKVGVRNDRKQAMQELKKA----DISEDLLKSSEDEVQELTNTYIERIDKILTVK 176

Query: 180 KKEIMHF 186
           + EIM  
Sbjct: 177 ETEIMTV 183


>gi|255693713|ref|ZP_05417388.1| ribosome recycling factor [Bacteroides finegoldii DSM 17565]
 gi|260620530|gb|EEX43401.1| ribosome recycling factor [Bacteroides finegoldii DSM 17565]
          Length = 186

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   LDNAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+V+RI +P  TEERR  L K      E +K
Sbjct: 68  TIKPWDKSMFRVIEKAIIDSDLGIMPENNGEVIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRDG+D LKK+ K G  +ED   + E  +QKI D  IK ID    EK KEIM  
Sbjct: 128 VSVRNARRDGIDALKKAVKDG-LAEDEQKNAEAKLQKIHDKYIKQIDDMLAEKDKEIMTV 186


>gi|149178920|ref|ZP_01857498.1| Ribosome recycling factor [Planctomyces maris DSM 8797]
 gi|148842259|gb|EDL56644.1| Ribosome recycling factor [Planctomyces maris DSM 8797]
          Length = 186

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 61/184 (33%), Positives = 109/184 (59%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+Q   L + ++RM   +   +  +  +RTGR +P ++D ++V+ YGS  PL Q+ANV+V
Sbjct: 1   MDQAEILLDAEERMDKAVHVFQGQLQGIRTGRATPGLVDSIRVDYYGSPTPLKQMANVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP+ +++  +D  MV  + + I  S++GL P  +G+V+R+ +P  + ERR  +V     
Sbjct: 61  PEPQQILIRPFDAGMVGEIAKAITASDMGLAPNTDGRVVRLNIPPLSTERRRQMVSRVKE 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+++IS+RNIRRD   H  +S K     ED     ++ +Q++T      ++S  + K+
Sbjct: 121 LAEEARISIRNIRRDANKHADQSEKDKVMGEDERDDTKDQVQELTKKFEGKVNSMADAKE 180

Query: 181 KEIM 184
           K++M
Sbjct: 181 KDVM 184


>gi|168188136|ref|ZP_02622771.1| ribosome recycling factor [Clostridium botulinum C str. Eklund]
 gi|169294032|gb|EDS76165.1| ribosome recycling factor [Clostridium botulinum C str. Eklund]
          Length = 185

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 81/180 (45%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M  +IS LKKD+ +++ G+ +P+MLD V VE YGS  P+NQ+ANV+  EPR+L
Sbjct: 6   LNNSQEKMLKSISVLKKDLGSMKAGKANPAMLDRVNVEYYGSETPINQLANVSSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  +  +ER I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E+SK
Sbjct: 66  LIQPWDKNSLKDIERAILQSDLGLNPSNDGSVIRLIIPELTEETRKDIVKKVKKVGEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++R+IRR+G D +K  +K+   +ED     EN +QKITD  I  ID+  + K+KE+M  
Sbjct: 126 IAIRSIRREGNDKIKNLKKNNDITEDEAKEGENSVQKITDKYITEIDNIIDAKEKEVMSV 185


>gi|255994878|ref|ZP_05428013.1| ribosome recycling factor [Eubacterium saphenum ATCC 49989]
 gi|255993591|gb|EEU03680.1| ribosome recycling factor [Eubacterium saphenum ATCC 49989]
          Length = 190

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 121/186 (65%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M ++ID  N K++   TIS L  ++ ++R GR +PS+LD ++V+ YG+  PL  +AN++V
Sbjct: 7   MKEIID--NFKEKGEKTISLLTGELNSVRAGRANPSLLDQIRVDYYGTPTPLKNIANISV 64

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +P+ L++S +D   +  + + I+ES LG+NP+ +G+ +R+ VP+ TEERR  + K+   
Sbjct: 65  PDPKSLMISPFDPSAIKEIIKAINESELGINPLDDGKNIRLKVPQLTEERRKEITKMVKQ 124

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             + +KI++RN+RRD  DHLKK+ K+G  SED +     DIQ  TD   K ID   +EK+
Sbjct: 125 ITDDAKIAIRNLRRDANDHLKKAEKNGDISEDELKGDTKDIQTKTDEFTKKIDGMLKEKE 184

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 185 KEIMSV 190


>gi|221194591|ref|ZP_03567648.1| ribosome recycling factor [Atopobium rimae ATCC 49626]
 gi|221185495|gb|EEE17885.1| ribosome recycling factor [Atopobium rimae ATCC 49626]
          Length = 181

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 3/179 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              K  M   I  LK +   +RTGR +P  LD +KV+ YG   P+ Q+A V V E  +LV
Sbjct: 6   DKAKASMDKGIEALKNNFARVRTGRANPHALDPIKVDYYGQPTPIMQLAAVKVPEASLLV 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  + ++E+ I  S+LG+ P  +G  +R+P P  TEERR  L K     AE+++I
Sbjct: 66  IEPWDKTSLKAIEKAIEASDLGITPSNDGATIRLPFPMPTEERRRELAKECAGLAEEARI 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RRD    +    +  + SED  A  +  IQK+TD ++  I+   + K  E+M  
Sbjct: 126 AIRNVRRDINGKI---ERDEELSEDDQAREKKHIQKLTDDSVAEIERLLKVKTAEVMEI 181


>gi|163753790|ref|ZP_02160913.1| ribosome recycling factor (ribosome releasing factor) [Kordia
           algicida OT-1]
 gi|161326004|gb|EDP97330.1| ribosome recycling factor (ribosome releasing factor) [Kordia
           algicida OT-1]
          Length = 184

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 75/188 (39%), Positives = 111/188 (59%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I   +   K+ M   I+ L K ++ +R G+ SP+ML  V V+ YGS  PL+QVANV
Sbjct: 1   MNEDIKFIIDTTKEGMDSAITHLTKQLLGIRAGKASPAMLSSVMVDYYGSQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + +  W+K M+  +E+GI  +NLG NP+  G+ + I VP  TEERR  LVK +
Sbjct: 61  NSTDARTITIQPWEKSMIQEIEKGILVANLGFNPMNNGESVIINVPPLTEERRRELVKQS 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE +K+ +RN R++    +KK       S+D+  + E D+Q +TD  +K ID  F  
Sbjct: 121 KAEAEDAKVGIRNARQEANKEIKKL----DVSDDLKKNAEIDVQALTDDYVKKIDEIFSV 176

Query: 179 KKKEIMHF 186
           K+KEIM  
Sbjct: 177 KEKEIMTV 184


>gi|237751369|ref|ZP_04581849.1| ribosome releasing factor [Helicobacter bilis ATCC 43879]
 gi|229372735|gb|EEO23126.1| ribosome releasing factor [Helicobacter bilis ATCC 43879]
          Length = 185

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            N K+ M  ++  L+KD  TLR+GRVS ++LD ++V+ YG+  PL QV +V   +   ++
Sbjct: 7   NNTKEYMQKSLQSLQKDFATLRSGRVSVNILDNIRVDYYGTPTPLAQVGSVIAQDATTII 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K ++  +E+ I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+KI
Sbjct: 67  INPWEKPLLKEIEKAIQEANIGVNPNADGECIKLFFPPMTSDQRKDIAKQAKAMGEKAKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K    + D      ++IQKITD  IK ID+  + K++E+M  
Sbjct: 127 AVRNIRQDSNNAIKKLEKDKAITTDESKKGADEIQKITDEHIKKIDNMVKTKEEEVMKV 185


>gi|227497536|ref|ZP_03927764.1| ribosome recycling factor [Actinomyces urogenitalis DSM 15434]
 gi|226832990|gb|EEH65373.1| ribosome recycling factor [Actinomyces urogenitalis DSM 15434]
          Length = 185

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   +++M   +   K+++  +RTGR +PSM + + V+ YG+  PL Q+A++T+ E R +
Sbjct: 6   MLEAEEKMEAALDAAKRELAAIRTGRANPSMFNSIVVDYYGAPTPLQQLASITIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +D+  +  +   I ES+LG+NP  +G V+R+ +P  TEERR   VK+A + AE+S+
Sbjct: 66  IVSPFDRGAMKEITSAIRESDLGVNPTDDGTVIRVTLPALTEERRKDYVKLARSRAEESR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I VR IR      L+  +K G+A ED V   E D+  +T   +++ID+    K+ E++  
Sbjct: 126 IQVRGIRGKSKKELEAIKKDGEAGEDDVKRAEGDLDALTKRFVESIDAALTAKEAELLEV 185


>gi|312143676|ref|YP_003995122.1| ribosome recycling factor [Halanaerobium sp. 'sapolanicus']
 gi|311904327|gb|ADQ14768.1| ribosome recycling factor [Halanaerobium sp. 'sapolanicus']
          Length = 185

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++RM   +   K+D+ T+RTGR  PS+++ +K   YG   P+ Q+A V   E R +
Sbjct: 6   LKETEERMKKALEATKEDLNTIRTGRARPSLVENIKANNYGVATPIQQMAKVMAPEARQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  + ++E+ I + NLGLNP  +G V+RI +P+ TEERR  L K+ H  AE  K
Sbjct: 66  VIEPWDKNNIEAIEKAIMQENLGLNPSNDGNVIRINIPQLTEERRKELTKILHKKAEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  + L+     G+ SED +    +++Q +TD+ I  I+S  E+K+ EIM  
Sbjct: 126 IAIRNIRRDANEELEMLEDEGEISEDNMHRGFDNVQDLTDTYIGKIESITEKKENEIMEV 185


>gi|224372138|ref|YP_002606510.1| ribosome recycling factor [Nautilia profundicola AmH]
 gi|223590013|gb|ACM93749.1| ribosome recycling factor [Nautilia profundicola AmH]
          Length = 184

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 79/186 (42%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +V +    K+ M  +I  LKKD+ TLRTG+VS  +LD VKVE YG+  PLNQVANV  
Sbjct: 1   MEEVFEF--AKEHMEKSIEVLKKDLNTLRTGKVSIHVLDGVKVEYYGAPTPLNQVANVNA 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           ++   +VVS WDK ++  +ER I E+N+G NP  +G V+++  P  TEE R    K A  
Sbjct: 59  VDATTIVVSPWDKSIINDIERAIQEANVGANPNNDGDVIKLYFPPMTEEERKKQAKKAKE 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           +AEK+KI++RNIRRD  D +KK  K  + +ED        +Q+ITD+ +  +D    +K 
Sbjct: 119 FAEKAKIAIRNIRRDANDDIKKMFKDKEITEDDQKRGLEKVQEITDAYVAKVDEIVNKKI 178

Query: 181 KEIMHF 186
            ++M  
Sbjct: 179 DDVMKV 184


>gi|294783615|ref|ZP_06748939.1| ribosome recycling factor [Fusobacterium sp. 1_1_41FAA]
 gi|294480493|gb|EFG28270.1| ribosome recycling factor [Fusobacterium sp. 1_1_41FAA]
          Length = 190

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 114/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+   ++R GR + +MLD VKVE YGS VPLNQV  V+  E R+L
Sbjct: 9   VKECEEKMLKTIEAVKERFTSIRAGRANVAMLDAVKVENYGSEVPLNQVGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK ++  +E+ +  +NLG+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VIDPWDKTLIPKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK  K  +   SED +   E  +Q +TD  IK ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEETHVQTLTDKYIKEIDELLAKKEKEI 187


>gi|149374434|ref|ZP_01892208.1| ribosome recycling factor [Marinobacter algicola DG893]
 gi|149361137|gb|EDM49587.1| ribosome recycling factor [Marinobacter algicola DG893]
          Length = 194

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 105/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + + +M  ++  L      +RTGR  PS+LD V V+ YG   PL QVA+V V + R L 
Sbjct: 16  ADAEKKMKKSLESLSWAFNKIRTGRAHPSILDSVTVDYYGQETPLKQVASVNVEDNRTLA 75

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           VS W+K ++  +E+ I  S+LGLNP   G+V+RIP+P  TEE R  +VK A A AE  K+
Sbjct: 76  VSPWEKPLLPKIEKAIMMSDLGLNPSNNGEVIRIPMPMLTEETRKEMVKQARADAEHGKV 135

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN RRD    LK+  K    +ED     E +IQK+TD  I  I+   + K++++M  
Sbjct: 136 SVRNARRDANSTLKELLKEKDINEDEERYGEEEIQKLTDRYIAEIEKQLKAKEEDLMAV 194


>gi|317056783|ref|YP_004105250.1| ribosome recycling factor [Ruminococcus albus 7]
 gi|315449052|gb|ADU22616.1| ribosome recycling factor [Ruminococcus albus 7]
          Length = 184

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 115/179 (64%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              K++M  +++ +  D   +R GR +P++LD VKV+ YGS  P+NQ+A V+V E R+LV
Sbjct: 6   NKAKEKMEKSVNVMLSDFAAIRAGRANPAVLDKVKVDYYGSPTPVNQMAAVSVAEARILV 65

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WDK  + S+E+ I  S++G+NP  +GQ +R+  P+ TE+RR  +VK      E +K+
Sbjct: 66  ITPWDKSTLKSIEKAIQASDIGINPQNDGQTIRLIFPQLTEDRRKEIVKDVKKGGEDTKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VR+IRRD ++ +K  +K+ + +ED     E  IQKITD  IK ID    EK+KEI+  
Sbjct: 126 AVRSIRRDAIEKIKAKKKNNEITEDEQKDGEEAIQKITDKFIKEIDGHVAEKEKEILSI 184


>gi|225011201|ref|ZP_03701661.1| ribosome recycling factor [Flavobacteria bacterium MS024-3C]
 gi|225004662|gb|EEG42624.1| ribosome recycling factor [Flavobacteria bacterium MS024-3C]
          Length = 184

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 74/188 (39%), Positives = 104/188 (55%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ +D  L + K+ M   ++ L+K    +R G+ SP ML  VKV+ YGS  PL+QVANV
Sbjct: 1   MNEEVDFILDSAKENMDRAMAHLEKSFAKIRAGKASPIMLSTVKVDYYGSPTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + V  W+K M+  +E+ I  +NLG NP+  G ++ I VP  TEERR  LVK A
Sbjct: 61  NTTDARTISVQPWEKNMLQEIEKAITNANLGFNPMNNGDLIIINVPPLTEERRRDLVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE +KI VRN R++    +K         ED     E  IQ++T+   K I+     
Sbjct: 121 KAEAEDAKIGVRNARQEANKDIK----GTDLPEDTAKDAEASIQELTNQYSKKIEELLTV 176

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 177 KEAEIMKV 184


>gi|153003180|ref|YP_001377505.1| ribosome recycling factor [Anaeromyxobacter sp. Fw109-5]
 gi|190360233|sp|A7H725|RRF_ANADF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|152026753|gb|ABS24521.1| ribosome recycling factor [Anaeromyxobacter sp. Fw109-5]
          Length = 187

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++   + +T+  L++++ ++RTGR S  +LD V+V+ YG+  PLNQVA ++V E R++
Sbjct: 8   LNDLHGGIANTLDDLRRELASVRTGRASLHLLDGVRVDYYGTSTPLNQVATLSVPEARLI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  W+K ++  +E+ I ++NLG+NP  +  ++R+P+P  TEERR  +VK      E  K
Sbjct: 68  MVKPWEKNLIPVIEKAIRDANLGVNPQSDKDLVRVPIPPLTEERRKEIVKQVKHKGEDHK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN RRD  + ++ + K G  + D      + +QK TD  +K +D     K+KE+M  
Sbjct: 128 VAIRNQRRDAKELIEVAEKDGDIAADDAKKALDKMQKETDEGVKKVDEIVAAKEKEVMQV 187


>gi|257467196|ref|ZP_05631507.1| ribosome recycling factor (RRF) [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315918326|ref|ZP_07914566.1| ribosome recycling factor [Fusobacterium gonidiaformans ATCC 25563]
 gi|313692201|gb|EFS29036.1| ribosome recycling factor [Fusobacterium gonidiaformans ATCC 25563]
          Length = 189

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 80/179 (44%), Positives = 116/179 (64%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  +++M  TI   K+   ++R GR S +MLD +KVE YGS +PLNQVA V+  E R+L
Sbjct: 8   IQECQNKMQKTIEATKEKFTSIRAGRASVAMLDNIKVEQYGSDMPLNQVATVSAPEARLL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M+  +E+ I  +NLG+NP  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 68  VIDPWDKTMILKIEKAILAANLGMNPNNDGRVVRLVMPELTADRRKEYVKLAKKEAENGK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D    LKK  K  +   SED +   E ++Q +TD TIK++D    +K+KEI
Sbjct: 128 IAVRNIRKDMNTALKKIEKDKESGMSEDELKRFEAEVQTLTDKTIKDLDDLLAKKEKEI 186


>gi|332883553|gb|EGK03836.1| ribosome-recycling factor [Dysgonomonas mossii DSM 22836]
          Length = 187

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 113/179 (63%), Gaps = 1/179 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  + +M  ++ FL + +  +R G+ +P +LD +K+E YGS  PL+ VA +   + R ++
Sbjct: 10  QKAEAKMLASVEFLDETLSRIRAGKANPHILDGIKLEYYGSITPLSGVAAINTPDARTII 69

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W+K+M+  VE+ I  S++G+ P   G+V+R+ +P  TEERR  LVK A   AE +K+
Sbjct: 70  VQPWEKQMLKEVEKAILNSDVGITPDNNGEVIRLSIPPLTEERRKLLVKQAKQEAEDAKV 129

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRN RRD +D +KKS K G  +ED+    EN++QK+ D  IK ID  F  K+KEI+  
Sbjct: 130 SVRNARRDAIDTIKKSVKEG-LAEDVAKDGENEMQKLHDKYIKKIDDLFALKEKEILTV 187


>gi|325110872|ref|YP_004271940.1| ribosome recycling factor [Planctomyces brasiliensis DSM 5305]
 gi|324971140|gb|ADY61918.1| ribosome recycling factor [Planctomyces brasiliensis DSM 5305]
          Length = 186

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 60/178 (33%), Positives = 107/178 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   +S L   +  LRTGR +P ++D ++V+ YGS  PL Q+AN++V EP+ +
Sbjct: 7   LLDCEERMDKAVSVLSDQLKGLRTGRANPGLVDSIRVDYYGSPTPLKQLANISVPEPQQI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   +  + + I  S++GL P  +G+++R+ +P  + ERR  LV     +AE+++
Sbjct: 67  VIRPFDASAINEIVKAIQASDVGLAPNNDGKLVRLNIPPLSTERRKQLVSRVKEFAEEAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RNIRRD   H  +S K    SED    +++ +Q++T      ++     K+K+IM
Sbjct: 127 VSIRNIRRDANKHADQSEKDKLFSEDERDDVKDKVQELTKKHEGLVNDAAAAKEKDIM 184


>gi|283955658|ref|ZP_06373151.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792883|gb|EFC31659.1| ribosome recycling factor [Campylobacter jejuni subsp. jejuni 1336]
          Length = 185

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 63/186 (33%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           ++++ + Q  +     ++  LKKD  TLRTG+V+  +LD + V+ YG+  PLNQVA V  
Sbjct: 2   LSEIFNKQKTQS--EKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQAPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K ++ ++E  I  +N+G+NP  +G+ +++  P  T E+R   VK A A
Sbjct: 60  SDASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QK+T++    ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTNAYTIKIDESVKSKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 SELLKV 185


>gi|160880757|ref|YP_001559725.1| ribosome recycling factor [Clostridium phytofermentans ISDg]
 gi|190360239|sp|A9KMX5|RRF_CLOPH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|160429423|gb|ABX42986.1| ribosome recycling factor [Clostridium phytofermentans ISDg]
          Length = 184

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 73/186 (39%), Positives = 118/186 (63%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN+ I  +  + +M  ++  LK++ + +R GR +P +LD ++V+ YG+   +  VANV+V
Sbjct: 1   MNEKI--KPFEGKMQKSLDSLKEEYVGIRAGRANPHLLDKLRVDYYGTPSAIQAVANVSV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R++ +  W+ +++  +E+ I  S+LGL P  +G+V+R+  PE TEERR  LVK    
Sbjct: 59  PEARVIQIQPWEAKLIKEIEKAIIASDLGLTPSNDGKVIRLVFPELTEERRKDLVKDVKK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE +K++VRN+RRD  D +KK  K+ + SED    +E++IQKITD  I  +D   E+K 
Sbjct: 119 KAENTKVAVRNVRRDANDAIKKLAKANEISEDEQKQIEDEIQKITDKFITEVDKVMEDKS 178

Query: 181 KEIMHF 186
           KEI+  
Sbjct: 179 KEILTV 184


>gi|257459905|ref|ZP_05625011.1| ribosome recycling factor [Campylobacter gracilis RM3268]
 gi|257442757|gb|EEV17894.1| ribosome recycling factor [Campylobacter gracilis RM3268]
          Length = 185

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 67/172 (38%), Positives = 101/172 (58%)

Query: 15  GDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKE 74
              I  LKKD  TLRTG+VS ++LD + V+ YGS  PLNQVA V   +   + ++ W+K 
Sbjct: 14  DRAIEALKKDFTTLRTGKVSVAILDHILVDYYGSQTPLNQVATVLSTDAVTISITPWEKP 73

Query: 75  MVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRR 134
           M+ ++E  I  +N+G+NP  +G+ +++  P  T E+R    K A A  EK+KI +RN+R+
Sbjct: 74  MLKAIESAIAAANIGVNPTNDGESVKLFFPPMTVEQRQENAKKAKAMGEKAKIGIRNVRK 133

Query: 135 DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           D  D +KK  K    SED      +++QKITDS    ID   + K+ E++  
Sbjct: 134 DANDEIKKLEKDKAISEDDAKKGYDEVQKITDSYSAKIDDAVKAKEAELLKV 185


>gi|256846527|ref|ZP_05551984.1| ribosome recycling factor [Fusobacterium sp. 3_1_36A2]
 gi|294784116|ref|ZP_06749417.1| ribosome recycling factor [Fusobacterium sp. 3_1_27]
 gi|256718296|gb|EEU31852.1| ribosome recycling factor [Fusobacterium sp. 3_1_36A2]
 gi|294488186|gb|EFG35531.1| ribosome recycling factor [Fusobacterium sp. 3_1_27]
          Length = 190

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 114/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD VKVE YGS VPLNQ+  V+  E R+L
Sbjct: 9   IKECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVENYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ VE+ +  +NLG+ P  +G+V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 69  VIDPWDKSLISKVEKALLAANLGMTPNNDGRVIRLVLPELTAERRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK  K  +   SED +   E  +Q +TD  +K ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEETRVQTLTDKYVKEIDDLLAKKEKEI 187


>gi|239917205|ref|YP_002956763.1| ribosome recycling factor [Micrococcus luteus NCTC 2665]
 gi|281414322|ref|ZP_06246064.1| ribosome recycling factor [Micrococcus luteus NCTC 2665]
 gi|259494549|sp|C5C9Q7|RRF_MICLC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|239838412|gb|ACS30209.1| ribosome recycling factor [Micrococcus luteus NCTC 2665]
          Length = 185

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ +++M  TI   ++D +++RTGR +P +   V V+ YGS  PL Q+A+ T  + R L
Sbjct: 6   LQSAEEQMDRTIEATREDFVSVRTGRANPGLYSKVMVDYYGSFTPLQQLASFTTTDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  + ++E+ + ES +G NP  +G+V+RI +PE T ERR   VK+  + AE+ K
Sbjct: 66  LITPFDQSALRNIEKALSESEVGANPSNDGKVIRIVMPELTAERRKEYVKLVKSKAEEHK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ISVRN RR   + + K+ K G+  ED  A  E ++  +T   ++ ID   + K++E++  
Sbjct: 126 ISVRNARRKAKEAMDKAVKDGEVGEDEGARGEKELDALTKRHVELIDEMAKNKEQELLEV 185


>gi|34762371|ref|ZP_00143373.1| Ribosome Recycling Factor (RRF) [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27887953|gb|EAA25019.1| Ribosome Recycling Factor (RRF) [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 190

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 78/179 (43%), Positives = 114/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD VKVE YGS VPLNQ+  V+  E R+L
Sbjct: 9   IKECEEKMVKTIEAVKEKFTAIRAGRANVSMLDGVKVENYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ VE+ +  +NLG+ P  +G+V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 69  VIDPWDKSLISKVEKALLAANLGMTPNNDGRVIRLVLPELTAERRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK  K  +   SED +   E  +Q +TD  +K ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEETRVQTLTDKYVKEIDDLLAKKEKEI 187


>gi|255036758|ref|YP_003087379.1| ribosome recycling factor [Dyadobacter fermentans DSM 18053]
 gi|254949514|gb|ACT94214.1| ribosome recycling factor [Dyadobacter fermentans DSM 18053]
          Length = 186

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 74/187 (39%), Positives = 113/187 (60%), Gaps = 2/187 (1%)

Query: 1   MNQV-IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M ++ + L + KD M   I  L  ++  +R G+ SP ML+ +++E YGS  P+  VA + 
Sbjct: 1   MEEIELYLDDAKDTMDGAIKHLIIELGKIRAGKASPQMLEGLQIEYYGSMTPIQNVATIN 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R L +  ++K+++  +E+ I  SNLG +P  +G+++RI VP   EERR  LVK A 
Sbjct: 61  TPDARTLAIKPFEKKIINDIEKAIRNSNLGFSPSNDGEMIRISVPPLNEERRRELVKRAK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E +KI+VRNIR+D  + L+K  K G  SED+V S E  +QK+TDS +  I+  F  K
Sbjct: 121 NEIETAKINVRNIRQDANNSLRKLTKEG-VSEDLVKSSEERVQKLTDSFVAKIEQIFSVK 179

Query: 180 KKEIMHF 186
           +KEIM  
Sbjct: 180 EKEIMEV 186


>gi|298346466|ref|YP_003719153.1| ribosome recycling factor [Mobiluncus curtisii ATCC 43063]
 gi|304389795|ref|ZP_07371754.1| ribosome recycling factor [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315657102|ref|ZP_07909986.1| ribosome recycling factor [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|298236527|gb|ADI67659.1| ribosome recycling factor [Mobiluncus curtisii ATCC 43063]
 gi|304326971|gb|EFL94210.1| ribosome recycling factor [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315492205|gb|EFU81812.1| ribosome recycling factor [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 185

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 99/180 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ K  M   +S  + +  ++RTGR + +M D + V+ YG+  PL Q+A+  + E R +
Sbjct: 6   LKSAKTMMTKALSATQDEFASIRTGRANTAMFDGIMVDYYGAPTPLKQLASFNIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +DK     + R I E++LG+NP  +G+ +RI +P  TEERR   VK+A   AE+ +
Sbjct: 66  IVQPFDKSASQDIIRAIAEADLGVNPTDDGKTIRIVLPALTEERRKEYVKIAKTKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            SVR++RR   D  +   K+ +  ED +   E ++  IT      ID     K+ E+M  
Sbjct: 126 QSVRSLRRKAKDEFEAMLKNKELGEDEIKRGEKELDSITKKFTDEIDQLLAAKESELMTI 185


>gi|325286740|ref|YP_004262530.1| Ribosome-recycling factor [Cellulophaga lytica DSM 7489]
 gi|324322194|gb|ADY29659.1| Ribosome-recycling factor [Cellulophaga lytica DSM 7489]
          Length = 185

 Score =  216 bits (552), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 74/188 (39%), Positives = 106/188 (56%), Gaps = 5/188 (2%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  L + K+ M  TI  L+K  + +R G+ SP ML  V V+ YGS  PL+QVANV
Sbjct: 1   MNEEINFILDSTKESMNGTIDHLEKAFIKIRAGKASPVMLSSVMVDYYGSATPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + V  W+K M+  +E+ I  SNLG NP+  G  + I VP  TEERR  L K A
Sbjct: 61  NTPDARTISVQPWEKNMLQEIEKAIMNSNLGFNPMNNGDFVIINVPPLTEERRRDLAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              A+ +KI +RN R++    ++       ASED+  + E D+Q +T+   K ID+    
Sbjct: 121 KGEADDAKIGIRNARQEANKEIRAL---DDASEDLKKNAEADVQDLTNLYTKKIDALLVT 177

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 178 KEAEIMKV 185


>gi|322379208|ref|ZP_08053599.1| ribosome recycling factor [Helicobacter suis HS1]
 gi|322379720|ref|ZP_08054033.1| ribosome recycling factor [Helicobacter suis HS5]
 gi|321147869|gb|EFX42456.1| ribosome recycling factor [Helicobacter suis HS5]
 gi|321148348|gb|EFX42857.1| ribosome recycling factor [Helicobacter suis HS1]
          Length = 187

 Score =  216 bits (552), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 63/179 (35%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ +++M  ++  L KD  TLR+G+VS ++L+ V+V+ Y S  PLNQVA++   +   L 
Sbjct: 9   QHSQEQMQKSLQSLLKDFTTLRSGKVSINLLEHVRVDYYNSPTPLNQVASILSTDASTLT 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K ++  +ER + E+NLG+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 69  ITPWEKGLLKEIERALQEANLGVNPNNDGETIKLFFPPMTSEQRKEIAKEAKAMGEKAKV 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K    S D       ++QK TD+ I  I+   + K++E++  
Sbjct: 129 AVRNIRQDANNQIKKLEKEKSISADENKKALAEVQKHTDAFINKIEQAVKAKEEEVLKL 187


>gi|237753264|ref|ZP_04583744.1| ribosome recycling factor [Helicobacter winghamensis ATCC BAA-430]
 gi|229375531|gb|EEO25622.1| ribosome recycling factor [Helicobacter winghamensis ATCC BAA-430]
          Length = 184

 Score =  216 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 63/178 (35%), Positives = 112/178 (62%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + K+ M  +I  +KK+  TLR+G+VS S+LD ++++ Y +  PLNQV +V   +   +V+
Sbjct: 7   HTKEAMDKSIEAMKKEFGTLRSGKVSVSILDHIRIDYYDTPTPLNQVGSVIAQDASTIVI 66

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A    EK+K++
Sbjct: 67  TPWEKNLLKDIERAIQEANIGVNPNNDGETIKLFFPPMTSEQRKEIAKEAKNIGEKAKVA 126

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIR+D  D +KK  K  + SED     +++IQK TD+  K ID   + K+++++  
Sbjct: 127 IRNIRKDSNDKIKKLEKDKEISEDESKKGQDEIQKFTDNATKKIDELVKHKEEDLLKI 184


>gi|315655036|ref|ZP_07907940.1| ribosome recycling factor [Mobiluncus curtisii ATCC 51333]
 gi|315490692|gb|EFU80313.1| ribosome recycling factor [Mobiluncus curtisii ATCC 51333]
          Length = 185

 Score =  216 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 99/180 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ K  M   +S  + +  ++RTGR + +M D + V+ YG+  PL Q+A+  + E R +
Sbjct: 6   LKSAKTMMAKALSATQDEFASIRTGRANTAMFDGIMVDYYGAPTPLKQLASFNIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +DK     + R I E++LG+NP  +G+ +RI +P  TEERR   VK+A   AE+ +
Sbjct: 66  IVQPFDKSASQDIIRAIAEADLGVNPTDDGKTIRIVLPALTEERRKEYVKIAKTKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            SVR++RR   D  +   K+ +  ED +   E ++  IT      ID     K+ E+M  
Sbjct: 126 QSVRSLRRKAKDEFEAMLKNKELGEDEIKRGEKELDSITKKFTDEIDQLLAAKESELMTI 185


>gi|153808675|ref|ZP_01961343.1| hypothetical protein BACCAC_02974 [Bacteroides caccae ATCC 43185]
 gi|149128501|gb|EDM19719.1| hypothetical protein BACCAC_02974 [Bacteroides caccae ATCC 43185]
          Length = 186

 Score =  216 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M   I +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   LDNAQEKMDMAIMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  TIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRDG+D LKK+ K G  +ED   + E  +QKI D  IK ID    EK KEIM  
Sbjct: 128 VSVRNARRDGIDALKKAVKDG-LAEDEQKNAEAKLQKIHDKYIKQIDDMLAEKDKEIMTV 186


>gi|256820725|ref|YP_003142004.1| ribosome recycling factor [Capnocytophaga ochracea DSM 7271]
 gi|256582308|gb|ACU93443.1| ribosome recycling factor [Capnocytophaga ochracea DSM 7271]
          Length = 184

 Score =  216 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  L+   + M + +  L K +  +R G+ SP M+  V V+ YG+  PL+QVANV
Sbjct: 1   MNEEINIILETTSEAMQEALQHLDKALANIRAGKASPQMVSSVMVDYYGAQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +  + R + +  W+K+M+  +E+ I  +NLG NP+  G+++ I VP  TEERR  LVK A
Sbjct: 61  SAPDSRTISIQPWEKKMIQPIEKAIQIANLGFNPMNNGEMVIITVPPLTEERRRELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E +KISVRN R+D    +KK     +AS+D+    E  +QK+TD  IK ++     
Sbjct: 121 KGEGEDAKISVRNARQDANKEIKKV----EASDDVKKEAEERVQKLTDKYIKKVEEVLAV 176

Query: 179 KKKEIMHF 186
           K+ EI+  
Sbjct: 177 KEAEILKV 184


>gi|237739392|ref|ZP_04569873.1| ribosome recycling factor [Fusobacterium sp. 2_1_31]
 gi|229423000|gb|EEO38047.1| ribosome recycling factor [Fusobacterium sp. 2_1_31]
          Length = 190

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/179 (44%), Positives = 116/179 (64%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D+M  TI  +K+   ++R GR + +MLD VKVE YGS VPLNQV +V+  E R+L
Sbjct: 9   VKECEDKMLKTIESVKERFTSIRAGRANVAMLDAVKVENYGSEVPLNQVGSVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  WDK ++  +E+ +  +NLG+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VVDPWDKTLIPKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK  K  +   SED +   E ++Q +TD  IK ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEEANVQTLTDKYIKEIDELLAKKEKEI 187


>gi|332877581|ref|ZP_08445325.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332684430|gb|EGJ57283.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 184

 Score =  216 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/188 (37%), Positives = 108/188 (57%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  L +  + M + +  L K +  +R G+ SP ML  V V+ YG+  PL+QVANV
Sbjct: 1   MNEEINIILDSTSEAMQEALQHLDKALGNIRAGKASPQMLGSVMVDYYGAQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + +  W+K+M+  +E+ I  +NLG NP+  G+++ I VP  TEERR  LVK A
Sbjct: 61  AAPDSRTITIQPWEKKMIQPIEKAIQIANLGFNPMNNGEMVIISVPPLTEERRKELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E +KISVRN R++    +KK     + S+D+    E  +QK+TD  IK ++     
Sbjct: 121 KGEGEDAKISVRNARQEANKEIKKV----ETSDDIKKDAEERVQKLTDKYIKKVEEVLAA 176

Query: 179 KKKEIMHF 186
           K+ EI+  
Sbjct: 177 KEAEILKV 184


>gi|29347659|ref|NP_811162.1| ribosome recycling factor [Bacteroides thetaiotaomicron VPI-5482]
 gi|253572118|ref|ZP_04849522.1| ribosome-recycling factor [Bacteroides sp. 1_1_6]
 gi|34924952|sp|Q8A5J0|RRF_BACTN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29339560|gb|AAO77356.1| ribosome recycling factor (ribosome releasing factor) [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251838298|gb|EES66385.1| ribosome-recycling factor [Bacteroides sp. 1_1_6]
          Length = 186

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 112/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA ++  + R +
Sbjct: 8   LDNAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAALSTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M  ++E+ I +S+LG+ P   G+V+RI +P  TEERR  L K   A  E +K
Sbjct: 68  TIKPWDKSMFRAIEKAIIDSDLGIMPENNGEVIRIGIPPLTEERRRQLAKQCKAEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRDG+D LKK+ K G  +ED   + E  +QKI D  IK I+    +K KEIM  
Sbjct: 128 VSVRNARRDGIDALKKAVKDG-LAEDEQKNAEAKLQKIHDKYIKQIEDMLADKDKEIMTV 186


>gi|21674395|ref|NP_662460.1| ribosome recycling factor [Chlorobium tepidum TLS]
 gi|25453262|sp|Q8KC49|RRF_CHLTE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21647576|gb|AAM72802.1| ribosome recycling factor [Chlorobium tepidum TLS]
          Length = 186

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q I+ RM  TI   + ++ ++RTG+ + ++LD VKVEAYGS +PL QV NV VL+   L
Sbjct: 7   IQKIEPRMKKTIEAFQHELASIRTGKATTALLDRVKVEAYGSQMPLKQVGNVGVLDAHTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWDK MV + ER I ++ LGLNP  +GQ +RI +P  TEERR   VK+   + E SK
Sbjct: 67  TVQVWDKSMVGATERAIRDAGLGLNPSADGQNIRISIPPLTEERRKEFVKLTKKFGEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN RRD +  ++K  K    SED +   + D   +     K I     +K+KEIM  
Sbjct: 127 VSLRNHRRDLIHEVEKLEKEKLISEDELKRGKKDADDLLHKYEKQITELIAQKEKEIMEV 186


>gi|332665961|ref|YP_004448749.1| ribosome-recycling factor [Haliscomenobacter hydrossis DSM 1100]
 gi|332334775|gb|AEE51876.1| Ribosome-recycling factor [Haliscomenobacter hydrossis DSM 1100]
          Length = 188

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 68/186 (36%), Positives = 116/186 (62%), Gaps = 3/186 (1%)

Query: 3   QVIDL--QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + IDL  ++ +++M   I  LK ++  + TG+ SP+++  + V  YG+  P++QVA+V+ 
Sbjct: 4   EEIDLIMEDAEEQMDKAIEHLKIELSKITTGKASPALVTSLMVAYYGTPTPMSQVASVST 63

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R +V+  W++ M+A +E+ I E+NLG+ P+ +GQV+R+ +P  TEERR  LVK    
Sbjct: 64  SDSRTIVIQPWERSMLAPIEKSIFEANLGVTPMNDGQVVRLSIPPLTEERRRDLVKRCAH 123

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E+SK+ VR+ RRD ++ +KK+ K+G   ED+   LE D   ++   I  +D   + K+
Sbjct: 124 LGEESKVGVRSGRRDAIEAIKKAVKNG-TPEDLGKKLEEDADNLSKRYIGQVDELVKGKE 182

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 183 KEIMTI 188


>gi|304414212|ref|ZP_07395580.1| ribosome recycling factor [Candidatus Regiella insecticola LSR1]
 gi|304283426|gb|EFL91822.1| ribosome recycling factor [Candidatus Regiella insecticola LSR1]
          Length = 185

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 71/165 (43%), Positives = 103/165 (62%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           N  +RM   I+  +     +RTGR SPS+LD +KVE YGS  PL Q+A+V   + R L +
Sbjct: 8   NAIERMEKCIATFQTQSSRIRTGRASPSILDGIKVEYYGSATPLRQLASVVAEDARTLAI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
            V+D+ +++ VE+ I  S+LGLNP   G  +RIP+P  TEERR  L+K+    AE S+++
Sbjct: 68  DVFDRNLISVVEKAIIASDLGLNPSSAGSRIRIPLPPLTEERRKELIKIVGQDAENSRVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           +RN+RRD  + +K   K    SED     ++ IQK+TD +IK ID
Sbjct: 128 IRNVRRDANEKIKVLLKDKAISEDEERQAQDKIQKLTDGSIKKID 172


>gi|311744119|ref|ZP_07717925.1| ribosome recycling factor [Aeromicrobium marinum DSM 15272]
 gi|311313249|gb|EFQ83160.1| ribosome recycling factor [Aeromicrobium marinum DSM 15272]
          Length = 185

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 101/180 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+    +M   +   +++   +RTGR  P+M   +  + YG+  PL Q+A   V EPR +
Sbjct: 6   LREADTKMAKAVEHTREEFAAIRTGRAHPAMFAQITADYYGTPTPLQQLAGFQVPEPRTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D    +++ER I +S+LG+NP  +G+VLR+ +PE TEERR   VK+A   AE  K
Sbjct: 66  IISPYDAGAKSAIERAIRDSDLGVNPTDDGKVLRVSLPELTEERRKEYVKLARTKAEDGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RR+    L ++ K  + S+D     E  +  +T   +  ID   + K+ E+   
Sbjct: 126 IAVRNLRRNAKQALDRAEKESEISKDDNTGAEKRLDALTKKYVDLIDEVLKGKEAELTEV 185


>gi|319953568|ref|YP_004164835.1| ribosome recycling factor [Cellulophaga algicola DSM 14237]
 gi|319422228|gb|ADV49337.1| ribosome recycling factor [Cellulophaga algicola DSM 14237]
          Length = 185

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/188 (37%), Positives = 102/188 (54%), Gaps = 5/188 (2%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I   L +  + M  +I  L K    +R G+ +P ML  V V+ YGS  PL QVANV
Sbjct: 1   MNEEITFILDSTNESMNGSIDHLVKAFAKIRAGKANPIMLSSVMVDYYGSQTPLAQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +  + R L V  W+K M+  +E+ I  +NLG NP+  G  + I VP  TEERR  L K A
Sbjct: 61  STPDARTLTVQPWEKNMLQPIEKAIMIANLGFNPMNNGDFIIISVPPLTEERRRDLAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AE +K+ +RN R++    ++       ASED+  + E DIQ++T+   + I+     
Sbjct: 121 KGEAEDAKVGIRNARQEANKEIRAL---DDASEDLKKNAEADIQELTNKFSRKIEEVLTV 177

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 178 KEAEIMKV 185


>gi|315604533|ref|ZP_07879596.1| ribosome recycling factor [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313545|gb|EFU61599.1| ribosome recycling factor [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 185

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 59/180 (32%), Positives = 99/180 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M   +     +   +RTGR + SM + + V+ YG+  P+ Q+A+  + E R +
Sbjct: 6   LLEAEDKMDKAVDSASHEFANIRTGRATSSMFEQLMVDYYGAPTPMQQLASFQIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D+     + R + ES+LG+NP  +G V+R+ +P  TEERR   VK A + AE  +
Sbjct: 66  LISPFDRTATQEIIRTLRESDLGVNPTDDGNVVRVVLPALTEERRKEYVKQAKSKAEDGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVR +RR   D L + +K G+ SED  A  E  +  +T +    ID     K+ E++  
Sbjct: 126 VSVRGVRRKAKDQLDRLKKDGEVSEDDTARAEKSLDAMTKAHTDKIDKMLATKESELLTI 185


>gi|254303395|ref|ZP_04970753.1| ribosome recycling factor [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323587|gb|EDK88837.1| ribosome recycling factor [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 190

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/179 (43%), Positives = 115/179 (64%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD VKVE YGS VPLNQ+  V+  E R+L
Sbjct: 9   VKECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVENYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ +  +NLG+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VIDPWDKSLISKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK  K  +   SED +   E  +Q +TD  +K ID  F +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEEATVQTLTDKYVKEIDDLFAKKEKEI 187


>gi|162447997|ref|YP_001621129.1| ribosome recycling factor [Acholeplasma laidlawii PG-8A]
 gi|189044043|sp|A9NHC3|RRF_ACHLI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|161986104|gb|ABX81753.1| ribosome recycling factor [Acholeplasma laidlawii PG-8A]
          Length = 184

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 67/188 (35%), Positives = 111/188 (59%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+  D  L  I+++M  ++  L ++   +RTGR +P++LD + V  YG   PL QVA++
Sbjct: 1   MNEQADMILLEIEEKMEKSLEALGREYAAVRTGRANPNILDRIMVSYYGVDTPLKQVASI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +V E + L +  +DK ++  +E  I+ S+L L P  +G  +R+ +P  T ERR +LVK  
Sbjct: 61  SVPEAQQLYIKPFDKSILKDIETAINTSSLELPPRNDGTGIRLTLPALTGERRRSLVKDV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              AE  K+++R+IRRDG +HLKK       +ED       D+Q +TD+ +K +D   +E
Sbjct: 121 EKMAEAGKVAIRHIRRDGNEHLKKL----GLTEDDEKGYLEDVQALTDAYVKKVDELTKE 176

Query: 179 KKKEIMHF 186
           K +E++  
Sbjct: 177 KSEELLDV 184


>gi|237741356|ref|ZP_04571837.1| ribosome Recycling Factor [Fusobacterium sp. 4_1_13]
 gi|229430888|gb|EEO41100.1| ribosome Recycling Factor [Fusobacterium sp. 4_1_13]
          Length = 190

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 114/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD +KVE YGS VPLNQ+  V+  E R+L
Sbjct: 9   VKECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGIKVENYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ +  +NLG+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VIDPWDKSLISKIEKALLAANLGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  +HLKK  K  +   SED +   E  +Q +TD  +K ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNHLKKLEKDKENPISEDELKKEETRVQTLTDKYVKEIDDLLAKKEKEI 187


>gi|315223859|ref|ZP_07865707.1| ribosome recycling factor [Capnocytophaga ochracea F0287]
 gi|314946189|gb|EFS98190.1| ribosome recycling factor [Capnocytophaga ochracea F0287]
          Length = 184

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 71/188 (37%), Positives = 110/188 (58%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  L+   + M + +  L K +  +R G+ SP M+  V V+ YG+  PL+QVANV
Sbjct: 1   MNEEINIILETTSEAMQEALQHLDKALANIRAGKASPQMVSSVMVDYYGAQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +  + R + +  W+K+M+  +E+ I  +NLG NP+  G+++ I VP  TEERR  LVK A
Sbjct: 61  SAPDSRTISIQPWEKKMIQPIEKAIQIANLGFNPMNNGEMVIITVPPLTEERRKELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E +KISVRN R+D    +KK     +AS+D+    E  +QK+TD  IK ++     
Sbjct: 121 KGEGEDAKISVRNARQDANKEIKKV----EASDDVKKEAEERVQKLTDKYIKKVEEVLAV 176

Query: 179 KKKEIMHF 186
           K+ EI+  
Sbjct: 177 KEAEILKV 184


>gi|330807784|ref|YP_004352246.1| ribosome recycling factor [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375892|gb|AEA67242.1| ribosome recycling factor [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 185

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/179 (35%), Positives = 100/179 (55%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L  +   +RTG+  PS+L+ V V  YGS  P+ QVAN+TV + R L 
Sbjct: 7   KDAEQRMQKSLESLAHNFGRIRTGQAHPSILEGVMVPYYGSDTPIKQVANITVKDARTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+ +V++ I  + L LNP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLGAVDKAIGSAGLNLNPTNLGELLLISMPALTEETRKGFTKQARDVAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED       +I  +T   +  ID+   +K+K++M  
Sbjct: 127 AVRNIRRDANSQLKDLVKEKEISEDEERRATGEIDDLTKKYVAKIDADLAQKEKDLMAV 185


>gi|320109136|ref|YP_004184726.1| ribosome recycling factor [Terriglobus saanensis SP1PR4]
 gi|319927657|gb|ADV84732.1| ribosome recycling factor [Terriglobus saanensis SP1PR4]
          Length = 194

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 71/178 (39%), Positives = 108/178 (60%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
            I+ RM  T+   +  ++ +RTGR S  MLD ++V+ YGS +P+NQ+A V+  E  ++VV
Sbjct: 17  QIQTRMNKTVDDFRASLVGVRTGRASVHMLDAIRVDYYGSEMPVNQLATVSTPEATLIVV 76

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           S +D  +V  +E+ I  S  G NP+ +G+V+RIP+P  TEERR   VK   +  E  K S
Sbjct: 77  SPFDPTVVPMIEKAIRNSGQGFNPMHDGKVIRIPIPPMTEERRKEAVKQLASVLEDHKTS 136

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRRDG D +KK+ K    S D       + Q +TD+ IK ++  F+ K+KE++  
Sbjct: 137 IRNIRRDGNDTIKKATKDKLISADDEKRAMEETQAMTDTEIKRVEDLFKAKEKEVLSL 194


>gi|222824490|ref|YP_002576064.1| ribosome releasing factor [Campylobacter lari RM2100]
 gi|254809499|sp|B9KE24|RRF_CAMLR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|222539711|gb|ACM64812.1| ribosome releasing factor [Campylobacter lari RM2100]
          Length = 185

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/186 (35%), Positives = 109/186 (58%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   Q  K +   ++  LKKD  T+RTG+V+ ++LD V V+ YGS  PLNQVA V  
Sbjct: 2   LNEIYTKQ--KQQSDKSLEALKKDFTTIRTGKVNINILDHVHVDYYGSQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++E  I  +N+G+NP  +G+ +++  P  T E+R    K A A
Sbjct: 60  TDASTISITPWEKPMLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENAKSAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+++RNIR+D  D +KK  K    SED      +++QK TD+    ID   + K+
Sbjct: 120 MGEKAKVAIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKQTDNYTTKIDELVKNKE 179

Query: 181 KEIMHF 186
            E++  
Sbjct: 180 AELLKV 185


>gi|299136134|ref|ZP_07029318.1| ribosome recycling factor [Acidobacterium sp. MP5ACTX8]
 gi|298602258|gb|EFI58412.1| ribosome recycling factor [Acidobacterium sp. MP5ACTX8]
          Length = 194

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/177 (39%), Positives = 110/177 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           + +K RM  T    + +++++RTGR S  MLD VKV+ YG+   + QVA VT  E  ++V
Sbjct: 16  EELKSRMDKTAEDFRANLLSVRTGRASVHMLDNVKVDYYGTETAIAQVAQVTTPEANLIV 75

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  W++ +V ++E+ I  S+ G NP+ +G+++R+P+P  TEERR   +K      E  K 
Sbjct: 76  VQPWEQSLVQAIEKAIRTSSQGFNPMHDGKIIRVPIPPMTEERRREGIKQLAGVLEDHKT 135

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           S+RNIRRDG + +KK+ K    S D       +IQ++TDS IK ++  F+ K+KE+M
Sbjct: 136 SIRNIRRDGNETVKKAAKDKLISADDEKRANEEIQQLTDSQIKRVEDLFKAKEKEVM 192


>gi|148270514|ref|YP_001244974.1| ribosome recycling factor [Thermotoga petrophila RKU-1]
 gi|166231525|sp|A5IMH5|RRF_THEP1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|147736058|gb|ABQ47398.1| ribosome recycling factor [Thermotoga petrophila RKU-1]
          Length = 185

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M  T+  ++ ++  +RTG+ SP++L+ +KV+ YG   P+NQ+A ++V E R L
Sbjct: 6   IKEAKEKMKKTLERIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISVSEERTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ I+ S+LGLNPI +G V+R+  P  T E+R   VK A    E+ K
Sbjct: 66  VIKPWDKSVLSLIEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD +  +K+ +K GK  ED    LEN+IQK+TD  I+N+D  FE KK+EIM F
Sbjct: 126 IAIRNIRRDILKKIKEDQKEGKIPEDDAKRLENEIQKLTDEFIENLDKVFEIKKEEIMEF 185


>gi|295396951|ref|ZP_06807073.1| ribosome recycling factor [Aerococcus viridans ATCC 11563]
 gi|294974804|gb|EFG50509.1| ribosome recycling factor [Aerococcus viridans ATCC 11563]
          Length = 186

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  KDRM  +     + +  +R G  + S+LD + VE YG    L Q+A +T+ EPRML
Sbjct: 7   LKETKDRMVKSEEAFTRTLARIRAGVANASLLDGITVEYYGVPTDLRQLATITIPEPRML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S +DK  +  +ER + +S+LG+ P  +G V+R+ +P  T+ERR  L K      E +K
Sbjct: 67  QISPYDKSSLNDIERALQQSDLGIPPTNDGSVIRLIIPALTQERRKELSKTVGKDLEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD +D  KK+ K+ + +ED V S E+DIQ +T++ IKN++    +K+ EIM+ 
Sbjct: 127 IAIRNIRRDAIDETKKAEKAKEITEDDVRSYESDIQDLTNAAIKNVEKIASDKEDEIMNV 186


>gi|291514370|emb|CBK63580.1| ribosome recycling factor [Alistipes shahii WAL 8301]
          Length = 185

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/186 (37%), Positives = 110/186 (59%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L     RM   I  L+++++ +R G+ SP+ L+ V V+ +GS VP++  A+VTV
Sbjct: 1   MDTKTILNEATGRMQKAIDHLEEELLNVRAGKASPNALNGVMVDYFGSQVPVSGAASVTV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R +++  WDK M+  +E+ I +SN+GL P   G+ +R+ +P  TEERR  LVK   A
Sbjct: 61  PDARTILIQPWDKNMLRPIEKAIIDSNIGLTPSNNGEQIRLTIPPLTEERRKELVKQVRA 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE ++IS+RN RRD ++  KK++K G   ED     E   QK+ +   K +D    +K+
Sbjct: 121 EAETARISLRNARRDAVEAFKKAQKEG-MPEDESKDGETQSQKLLEKFSKTLDEALSKKE 179

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 180 KEIMTV 185


>gi|269977913|ref|ZP_06184867.1| ribosome recycling factor [Mobiluncus mulieris 28-1]
 gi|306819219|ref|ZP_07452930.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35239]
 gi|307700228|ref|ZP_07637269.1| ribosome recycling factor [Mobiluncus mulieris FB024-16]
 gi|269933879|gb|EEZ90459.1| ribosome recycling factor [Mobiluncus mulieris 28-1]
 gi|304648001|gb|EFM45315.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35239]
 gi|307614610|gb|EFN93838.1| ribosome recycling factor [Mobiluncus mulieris FB024-16]
          Length = 185

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 98/180 (54%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ K +M   +   K +  T+RTGR + +M D + VE YGS  PL Q+A+  + E R +
Sbjct: 6   LKDTKTKMQKAVEATKDEFATIRTGRANAAMFDGIVVEYYGSPTPLKQLASFNIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+     +   I ES+LG+ P  +G+ +R+ +P  TE+RR   VK A   AE+ +
Sbjct: 66  IIQPFDRNATQDIIHAISESDLGVTPTDDGKTIRVVLPALTEDRRKEYVKQAKTKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R IRR   D ++  +K     ED V     ++  +T      +D+  E+K+ ++M  
Sbjct: 126 VSIRGIRRKAKDAMEALKKDKTLGEDEVERGVKELDTVTKKFTDEVDTLLEDKETDLMTV 185


>gi|160885096|ref|ZP_02066099.1| hypothetical protein BACOVA_03094 [Bacteroides ovatus ATCC 8483]
 gi|237714925|ref|ZP_04545406.1| ribosome recycling factor [Bacteroides sp. D1]
 gi|237718246|ref|ZP_04548727.1| ribosome recycling factor [Bacteroides sp. 2_2_4]
 gi|260174237|ref|ZP_05760649.1| ribosome recycling factor [Bacteroides sp. D2]
 gi|262406807|ref|ZP_06083356.1| ribosome recycling factor [Bacteroides sp. 2_1_22]
 gi|293368761|ref|ZP_06615365.1| ribosome recycling factor [Bacteroides ovatus SD CMC 3f]
 gi|294647222|ref|ZP_06724821.1| ribosome recycling factor [Bacteroides ovatus SD CC 2a]
 gi|294809166|ref|ZP_06767882.1| ribosome recycling factor [Bacteroides xylanisolvens SD CC 1b]
 gi|298483675|ref|ZP_07001850.1| ribosome recycling factor [Bacteroides sp. D22]
 gi|315922506|ref|ZP_07918746.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156109446|gb|EDO11191.1| hypothetical protein BACOVA_03094 [Bacteroides ovatus ATCC 8483]
 gi|229445250|gb|EEO51041.1| ribosome recycling factor [Bacteroides sp. D1]
 gi|229452430|gb|EEO58221.1| ribosome recycling factor [Bacteroides sp. 2_2_4]
 gi|262355510|gb|EEZ04601.1| ribosome recycling factor [Bacteroides sp. 2_1_22]
 gi|292636066|gb|EFF54554.1| ribosome recycling factor [Bacteroides ovatus SD CMC 3f]
 gi|292637509|gb|EFF55928.1| ribosome recycling factor [Bacteroides ovatus SD CC 2a]
 gi|294443560|gb|EFG12311.1| ribosome recycling factor [Bacteroides xylanisolvens SD CC 1b]
 gi|295084688|emb|CBK66211.1| ribosome recycling factor [Bacteroides xylanisolvens XB1A]
 gi|298270245|gb|EFI11831.1| ribosome recycling factor [Bacteroides sp. D22]
 gi|313696381|gb|EFS33216.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 186

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M   I +L++ +  +R G+ S  +LD ++V++YGS VP++ VA +T  + R +
Sbjct: 8   LDNAQEKMDMAIMYLEEALAHIRAGKASARLLDGIRVDSYGSMVPISNVAAITTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  VIKPWDKSMFRVIEKAIIDSDLGIMPENNGEMIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRDG+D LKK+ K G  +ED   + E  +QKI D  IK ID    EK KEIM  
Sbjct: 128 VSVRNARRDGIDALKKAVKDG-LAEDEQKNAEAKLQKIHDKYIKQIDDMLAEKDKEIMTV 186


>gi|323456603|gb|EGB12470.1| hypothetical protein AURANDRAFT_58615 [Aureococcus anophagefferens]
          Length = 171

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 73/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  +I  L+ ++ TLRTGR SP +L  V V+ YG+  PLNQ+A+V+V     LVVS +DK
Sbjct: 1   MDKSIGALRNNLGTLRTGRASPDILARVVVDYYGAETPLNQLASVSVSSGTQLVVSPYDK 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             + +VE  I ++NLG+ P  +G+++R+ VP  TE+RR  ++K A A  E +K+++RNIR
Sbjct: 61  SSLGAVESAIVDANLGMAPNNDGELIRLNVPALTEDRRKEILKQAKAVGEDAKVAIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +     +KK  K    SED+     N+IQK+TD  IK++D     K+KEIM  
Sbjct: 121 KGANSDVKKQGKD--LSEDVAKDANNEIQKLTDKLIKSVDEVVAAKEKEIMTV 171


>gi|299147798|ref|ZP_07040861.1| ribosome recycling factor [Bacteroides sp. 3_1_23]
 gi|298513981|gb|EFI37867.1| ribosome recycling factor [Bacteroides sp. 3_1_23]
          Length = 186

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 112/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+N +++M   I +L++ +  +R G+ S  +LD ++V++YGS VP++ VA +T  + R +
Sbjct: 8   LENAQEKMDMAIMYLEEALAHIRAGKASARLLDGIRVDSYGSMVPISNVAAITTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  VIKPWDKSMFRVIEKAIIDSDLGIMPENNGEMIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRDG+D LKK+ K G  +ED   + E  +QKI D  IK ID    EK KEIM  
Sbjct: 128 VSVRNARRDGIDALKKAVKDG-LAEDEQKNAEAKLQKIHDKYIKQIDDMLAEKDKEIMTV 186


>gi|242310135|ref|ZP_04809290.1| ribosome recycling factor [Helicobacter pullorum MIT 98-5489]
 gi|239523432|gb|EEQ63298.1| ribosome recycling factor [Helicobacter pullorum MIT 98-5489]
          Length = 186

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + ++ M  +I  +KK+  TLR+G+VS ++LD ++++ Y +  PLNQV +V   +   +V
Sbjct: 8   NHTQETMNKSIEAMKKEFGTLRSGKVSVAILDHIRIDYYDTPTPLNQVGSVIAQDASTIV 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A    EK+KI
Sbjct: 68  VTPWEKNLLKEIERAIQEANIGVNPNNDGEAIKLFFPPMTSEQRKEIAKEAKNIGEKAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIR+D  D +KK  K    SED     +++IQK TD+ +K ID   + K++E++  
Sbjct: 128 AIRNIRKDSNDKVKKLEKDKTISEDESKKAQDEIQKFTDNAVKKIDELVKHKEEELLKI 186


>gi|300870157|ref|YP_003785028.1| Ribosome recycling factor [Brachyspira pilosicoli 95/1000]
 gi|300687856|gb|ADK30527.1| Ribosome recycling factor [Brachyspira pilosicoli 95/1000]
          Length = 182

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 77/176 (43%), Positives = 112/176 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ KDRM   I+ L+ D+  +RTGR + S+LD VKVEAYGS +PL QV NV+  + + ++
Sbjct: 4   ESYKDRMEKAINSLQNDLKGIRTGRANASILDGVKVEAYGSSMPLKQVGNVSTPDAKTIM 63

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK +V  +E+ I +++LG NP  +G  +RI VPE T+ERR  L K      E++KI
Sbjct: 64  IQPFDKALVGDIEKAILKADLGFNPFNDGGNIRIMVPELTKERREELKKGVRHRGEEAKI 123

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++RNIRRD  D +KK  K    +ED   +LE  IQ  TDS IK +D     K+KE+
Sbjct: 124 AIRNIRRDENDIIKKDLKDKTITEDESKNLEKKIQNDTDSYIKKVDELITSKEKEL 179


>gi|294786947|ref|ZP_06752201.1| ribosome recycling factor [Parascardovia denticolens F0305]
 gi|315226584|ref|ZP_07868372.1| ribosome recycling factor [Parascardovia denticolens DSM 10105]
 gi|294485780|gb|EFG33414.1| ribosome recycling factor [Parascardovia denticolens F0305]
 gi|315120716|gb|EFT83848.1| ribosome recycling factor [Parascardovia denticolens DSM 10105]
          Length = 183

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +     +M  TI   K++ + +RTGR +P++ + + V+ YG+   L  +A++ V + R L
Sbjct: 4   VDEASSQMDKTIETTKENFVGIRTGRANPALFNGLTVDYYGAPTSLKALASIGVADNRTL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+ +D     S+E+ I +S+LG+NP  +G V+ + +PE TEERR   VK+AH  AE+ K
Sbjct: 64  SVTPFDVTQAGSIEKAIRDSDLGVNPRRDGNVIHVTLPELTEERRKDYVKLAHEIAERGK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRR   + + K+ K G   ED    L  D+ K T    + ID+  E K+KEI+  
Sbjct: 124 VAVRNIRRKTKEGIDKATKDGDFGEDEGKRLLTDLDKATKKATEEIDTLLETKEKEILSV 183


>gi|51473353|ref|YP_067110.1| ribosome recycling factor [Rickettsia typhi str. Wilmington]
 gi|60390689|sp|Q68XL4|RRF_RICTY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|51459665|gb|AAU03628.1| ribosome recycling factor [Rickettsia typhi str. Wilmington]
          Length = 186

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 84/177 (47%), Positives = 117/177 (66%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++++M   I  L  ++  LRTGR S + LD V VEAYGS VPL QVA+++  + R + V 
Sbjct: 10  LQEKMEKAIKVLGNELKGLRTGRASVNFLDSVTVEAYGSKVPLAQVASLSTPDARTINVQ 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           VWDK MV+SVE+GI  +NLGL    +GQ++R+P+P  TEERR   VK+AH Y E++KIS+
Sbjct: 70  VWDKSMVSSVEKGITIANLGLTHATDGQLIRLPIPSLTEERRKEFVKLAHKYGEETKISL 129

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIRRDG++ LKK  K     +D   SL   +QK+TD     +DS  ++K+ EIM  
Sbjct: 130 RNIRRDGIEELKKLEKDNIIVKDEYHSLSEQVQKLTDEYSSKVDSAIKQKEHEIMTV 186


>gi|237743351|ref|ZP_04573832.1| ribosome Recycling Factor [Fusobacterium sp. 7_1]
 gi|256028469|ref|ZP_05442303.1| ribosome recycling factor (RRF) [Fusobacterium sp. D11]
 gi|260495029|ref|ZP_05815158.1| ribosome recycling factor [Fusobacterium sp. 3_1_33]
 gi|289766390|ref|ZP_06525768.1| ribosome Recycling Factor [Fusobacterium sp. D11]
 gi|229433130|gb|EEO43342.1| ribosome Recycling Factor [Fusobacterium sp. 7_1]
 gi|260197472|gb|EEW94990.1| ribosome recycling factor [Fusobacterium sp. 3_1_33]
 gi|289717945|gb|EFD81957.1| ribosome Recycling Factor [Fusobacterium sp. D11]
          Length = 190

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 113/179 (63%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD VKV+ YGS VPLNQ+  V+  E R+L
Sbjct: 9   VKECEEKMLKTIEAVKEKFTAIRAGRANVSMLDGVKVDNYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ +  +NLG+ P  +G+V+R+ +PE T ERR   VK+A   AE  K
Sbjct: 69  VIDPWDKSLISKIEKALLAANLGMTPNNDGRVIRLVLPELTAERRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIR+D  + LKK  K  +   SED +   E  +Q +TD  +K ID    +K+KEI
Sbjct: 129 IAVRNIRKDINNRLKKLEKDKENPISEDELKKEETRVQTLTDKYVKEIDELLAKKEKEI 187


>gi|118443357|ref|YP_878219.1| ribosome recycling factor [Clostridium novyi NT]
 gi|166230781|sp|A0Q0R7|RRF_CLONN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118133813|gb|ABK60857.1| ribosome recycling factor [Clostridium novyi NT]
          Length = 185

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 119/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M  +IS LKKD+ +++ G+ +P+MLD V VE YGS  P+NQ+ANV+  EPR+L
Sbjct: 6   LNKSEEKMLKSISVLKKDLGSMKAGKANPAMLDRVNVEYYGSETPINQLANVSSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK  +  +E+ I +S+LGLNP  +G V+R+ +PE TEE R  +VK      E+SK
Sbjct: 66  LIQPWDKNSLKDIEKAILQSDLGLNPSNDGSVIRLIIPELTEETRKDIVKKVKKIGEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++R+IRR+G D +K  +K+   +ED     E+ +QKITD  I  ID+    K+KE+M  
Sbjct: 126 IAIRSIRREGNDKIKNLKKNNDITEDEAKEGESSVQKITDKYITEIDNIVSAKEKEVMSV 185


>gi|212695690|ref|ZP_03303818.1| hypothetical protein ANHYDRO_00207 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677363|gb|EEB36970.1| hypothetical protein ANHYDRO_00207 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 185

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ +  M       +  +  +R GR + S+LD +    YGS  P+NQ A ++  EPR+L
Sbjct: 6   IKDTESAMKKACESFEIRISKIRAGRANDSILDGLTFSYYGSQTPINQAATISTPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  +  +E+ I++S++G+NP  +G+V+R+P P  TEERR  L K  + Y+E SK
Sbjct: 66  VIKPWDKSNIKEIEKAINKSDIGINPQNDGEVIRLPFPALTEERRKDLTKQVNEYSEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +RNIRRD +D  KK  KS   +ED + S+E DIQKIT   I NI+   E K KE++  
Sbjct: 126 IQIRNIRRDSLDTAKKGEKSADLTEDDLFSIEEDIQKITKKYIDNIEKIAENKNKELLEV 185


>gi|154489842|ref|ZP_02030103.1| hypothetical protein PARMER_00071 [Parabacteroides merdae ATCC
           43184]
 gi|218258266|ref|ZP_03474668.1| hypothetical protein PRABACTJOHN_00323 [Parabacteroides johnsonii
           DSM 18315]
 gi|154089284|gb|EDN88328.1| hypothetical protein PARMER_00071 [Parabacteroides merdae ATCC
           43184]
 gi|218225609|gb|EEC98259.1| hypothetical protein PRABACTJOHN_00323 [Parabacteroides johnsonii
           DSM 18315]
          Length = 187

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M   I +L + +  +R G+ +P +LD V+V  YG+ VPL  VA VTV + R +
Sbjct: 8   VKAAEEKMTFAIEYLDEQLSHIRAGKANPKILDCVRVMYYGAPVPLTNVATVTVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K+++  +E+GI +S +G+ P   G+V+R+ +P  TEERR  L K +   AE +K
Sbjct: 68  MITPWEKKIIKDIEKGIMDSEVGITPENNGEVIRLGIPPLTEERRRLLAKQSKQEAETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RN RRD ++ LKKS K+    ED+    E ++QK+ D  IK +D  +  K+KEIM  
Sbjct: 128 ISIRNARRDAIEQLKKSIKTDGTPEDVEKDAEAEVQKVHDKYIKKVDELYAAKEKEIMTV 187


>gi|163786583|ref|ZP_02181031.1| ribosome releasing factor [Flavobacteriales bacterium ALC-1]
 gi|159878443|gb|EDP72499.1| ribosome releasing factor [Flavobacteriales bacterium ALC-1]
          Length = 184

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 81/188 (43%), Positives = 114/188 (60%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I   +   K+ M   I  L+K ++ +R G+ SPSML  V V+ YGS  PL+QVANV
Sbjct: 1   MNEDIKFIIDTAKEAMDSAIKHLEKQLINIRAGKASPSMLGSVMVDYYGSQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + V  W+K M+  +ERGI  +NLG NP+  G+++ I VP  TEERR  L K A
Sbjct: 61  NTPDGRTISVQPWEKSMLQEIERGIMVANLGFNPMNNGEMVIINVPPLTEERRRDLAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A  E +KI +RN R+D M+ +K    S   SED+  + E D+Q++TDS +K ID   + 
Sbjct: 121 KAETEDAKIGIRNARKDAMNDIK----STDVSEDLQKNAEIDVQELTDSYVKRIDDILDL 176

Query: 179 KKKEIMHF 186
           K+KEIM  
Sbjct: 177 KEKEIMTV 184


>gi|86131442|ref|ZP_01050040.1| Ribosome recycling factor [Dokdonia donghaensis MED134]
 gi|85817887|gb|EAQ39055.1| Ribosome recycling factor [Dokdonia donghaensis MED134]
          Length = 185

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 77/188 (40%), Positives = 112/188 (59%), Gaps = 5/188 (2%)

Query: 1   MNQ--VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+     + + K+ M + I+ L K ++T+R G+ SP+ML  + V+ YGS  PL+QVANV
Sbjct: 1   MNEDLKFIIDSAKEAMDNAITHLGKRLLTIRAGKASPAMLQGLMVDYYGSPTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + +  W+K ++  +E+ I   NLG NP+  G+ + I VP  TEERR  LVK A
Sbjct: 61  VAPDGRTISIQPWEKSIIQEIEKAIINGNLGFNPMNNGESVIINVPPLTEERRKELVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE +K+ VRN R++  + +KK      ASED  A+ E DIQK+TD  IK I+     
Sbjct: 121 KAEAEDAKVGVRNDRKNANNDIKKV---DSASEDEKANAEVDIQKLTDIHIKKIEEVLAN 177

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 178 KETEIMTV 185


>gi|183601689|ref|ZP_02963059.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|241190812|ref|YP_002968206.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241196218|ref|YP_002969773.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183219295|gb|EDT89936.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|240249204|gb|ACS46144.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250772|gb|ACS47711.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793801|gb|ADG33336.1| ribosome recycling factor [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 173

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 64/173 (36%), Positives = 103/173 (59%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  ++   K++   +RTGR +P++L+ + VE YG+  PL  VA + V EPR L V+ +D 
Sbjct: 1   MKKSVESTKENFAGIRTGRANPALLNGIVVEYYGAPTPLKHVATIGVPEPRTLSVTPFDP 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
               +VE+ + +S+LG +P   G  + + +PE TE+RR   VK+A + AE  K++VRNIR
Sbjct: 61  SQANAVEKALRDSDLGASPRRNGSAILLTMPELTEDRRKEYVKLAKSKAEDGKVAVRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           R   + + K+ K G+  ED    L  ++ K+T +T   +D+  E K+KEIM  
Sbjct: 121 RKSKEAIDKAVKDGEMGEDEGDRLLKELDKVTKATTDELDALLEAKQKEIMEV 173


>gi|15639592|ref|NP_219042.1| ribosome recycling factor [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025830|ref|YP_001933602.1| ribosome recycling factor [Treponema pallidum subsp. pallidum SS14]
 gi|6094140|sp|O83613|RRF_TREPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238689331|sp|B2S3J4|RRF_TREPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|3322898|gb|AAC65577.1| ribosome recycling factor [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189018405|gb|ACD71023.1| ribosome recycling factor [Treponema pallidum subsp. pallidum SS14]
 gi|291059975|gb|ADD72710.1| ribosome recycling factor [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 183

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 67/175 (38%), Positives = 115/175 (65%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           + +M  ++S L++   TLRT R +  +LD + V+ Y     L+QVA V+V E R++++  
Sbjct: 8   EQKMKKSLSALQEGFNTLRTERATAHLLDQITVDYYQQPTALSQVATVSVPEARLIIIQP 67

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           WDK ++A +ER I +S L LNP  +G+V+R+ +P  T+ERR  LV+ A A AE++++++R
Sbjct: 68  WDKTLLADIERAILKSKLSLNPSNDGKVIRLVIPPLTQERRKELVRQARALAEQARVAIR 127

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           NIRR+G++  K+  K G  SED + + E   QK TD+++ ++  +  EK+K+I+ 
Sbjct: 128 NIRREGIEEAKRGHKEGLLSEDALKAAEEAFQKATDASVADVARYLAEKEKDILE 182


>gi|157738471|ref|YP_001491155.1| ribosome recycling factor [Arcobacter butzleri RM4018]
 gi|315635330|ref|ZP_07890598.1| ribosome recycling factor [Arcobacter butzleri JV22]
 gi|226703250|sp|A8EX12|RRF_ARCB4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|157700325|gb|ABV68485.1| ribosome releasing factor [Arcobacter butzleri RM4018]
 gi|315480364|gb|EFU71029.1| ribosome recycling factor [Arcobacter butzleri JV22]
          Length = 185

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 59/179 (32%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              K+ M  +I  LKKD  +LRTG+V+ ++LD +KV+ YG+   L+QV +V   +   + 
Sbjct: 7   AQTKEHMEKSIEALKKDYKSLRTGKVNTNILDGIKVDYYGTMTDLSQVGSVLATDATTIT 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K ++ ++E+ I  +N+G+NP  +GQ++++  P  T E+R    K A    + +K+
Sbjct: 67  INPWEKNLLGTIEKAIQNANIGVNPNNDGQIIKLFFPPMTVEQRQETAKHAKTMTDNAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIR++  + +K   K    +ED     +++IQKITDS +   D   + K+KEI+  
Sbjct: 127 AIRNIRQNSNNKVKTLLKDKAITEDESKKAQDEIQKITDSYVLKADETLKAKEKEILTV 185


>gi|224418730|ref|ZP_03656736.1| ribosome recycling factor [Helicobacter canadensis MIT 98-5491]
 gi|253826742|ref|ZP_04869627.1| ribosome releasing factor [Helicobacter canadensis MIT 98-5491]
 gi|253510148|gb|EES88807.1| ribosome releasing factor [Helicobacter canadensis MIT 98-5491]
          Length = 186

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 62/179 (34%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + ++ M  +I  +KK+  TLR+G+VS ++LD +++  Y +  PLNQ+ +V   +   +V
Sbjct: 8   NHTQESMNKSIESMKKEFSTLRSGKVSVAILDHIRISYYDTPTPLNQIGSVIAQDASTIV 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A    EK+KI
Sbjct: 68  ITPWEKNLLKEIERAIQEANIGVNPNNDGETIKLFFPPMTSEQRKEIAKEAKNIGEKAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIR+D  D +KK  K    SED     + +IQK+TD+ +K ID   + K++E++  
Sbjct: 128 AIRNIRKDSNDKVKKLEKDKVVSEDESKKGQEEIQKLTDNAVKKIDELVKHKEEELLKI 186


>gi|15604030|ref|NP_220545.1| ribosome recycling factor [Rickettsia prowazekii str. Madrid E]
 gi|6226047|sp|Q9ZE08|RRF_RICPR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|3860721|emb|CAA14622.1| RIBOSOME RECYCLING FACTOR (rrf) [Rickettsia prowazekii]
 gi|292571749|gb|ADE29664.1| Ribosome recycling factor [Rickettsia prowazekii Rp22]
          Length = 186

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 84/177 (47%), Positives = 120/177 (67%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           ++++M   I  L  ++  LRTGR S + LD V VEAYGS +PL+QVA+++  + R + V 
Sbjct: 10  LQEKMEKAIKVLGNELKGLRTGRASINFLDSVTVEAYGSKIPLSQVASLSTPDARTINVQ 69

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           VWDK MV+SVE+GI  +NLGL    +GQ++R+P+P  TEERR  LVK+AH Y E++KIS+
Sbjct: 70  VWDKSMVSSVEKGITIANLGLTHATDGQLIRLPIPSLTEERRKELVKLAHKYGEETKISL 129

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIRRDG++ LKK  K     +D   +L   IQK+TD     +DS  ++K++EIM  
Sbjct: 130 RNIRRDGIEELKKLEKDNIIVKDEYHNLSEQIQKLTDEYSSKVDSAIKQKEQEIMTV 186


>gi|149194777|ref|ZP_01871872.1| ribosome recycling factor [Caminibacter mediatlanticus TB-2]
 gi|149135200|gb|EDM23681.1| ribosome recycling factor [Caminibacter mediatlanticus TB-2]
          Length = 184

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 114/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +V +    K+ M  +I  LKKD+ TLRTG+VS  +LD VKVE YG+  PLNQVAN+  
Sbjct: 1   MEEVFEF--AKEHMQKSIEVLKKDLNTLRTGKVSIHVLDGVKVEYYGAPTPLNQVANINA 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           ++   +V+S WDK ++  +E+ I E+N+G NP  +G  +++  P  TEE R    K A  
Sbjct: 59  VDATTIVISPWDKSIINDIEKAIQEANVGANPNNDGDTIKLYFPPMTEEERKKQAKKAKE 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + EK+KI++RNIRR+  D +KK  K+ + +ED      + +Q+ITD  IK +D    +K 
Sbjct: 119 FGEKAKIAIRNIRREANDEIKKMFKNKEITEDDQKRGLDKVQEITDEFIKKVDEIVNKKI 178

Query: 181 KEIMHF 186
            ++M  
Sbjct: 179 DDVMKV 184


>gi|313142247|ref|ZP_07804440.1| ribosome recycling factor [Helicobacter canadensis MIT 98-5491]
 gi|313131278|gb|EFR48895.1| ribosome recycling factor [Helicobacter canadensis MIT 98-5491]
          Length = 184

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 63/186 (33%), Positives = 115/186 (61%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M ++ +  + ++ M  +I  +KK+  TLR+G+VS ++LD +++  Y +  PLNQ+ +V  
Sbjct: 1   MQEIYN--HTQESMNKSIESMKKEFSTLRSGKVSVAILDHIRISYYDTPTPLNQIGSVIA 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   +V++ W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A  
Sbjct: 59  QDASTIVITPWEKNLLKEIERAIQEANIGVNPNNDGETIKLFFPPMTSEQRKEIAKEAKN 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+KI++RNIR+D  D +KK  K    SED     + +IQK+TD+ +K ID   + K+
Sbjct: 119 IGEKAKIAIRNIRKDSNDKVKKLEKDKVVSEDESKKGQEEIQKLTDNAVKKIDELVKHKE 178

Query: 181 KEIMHF 186
           +E++  
Sbjct: 179 EELLKI 184


>gi|225848029|ref|YP_002728192.1| ribosome recycling factor [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643308|gb|ACN98358.1| ribosome recycling factor [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 184

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 117/180 (65%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM   ++  K+++  +RTGR S  +++ +KV+ YGS +PL Q+A ++  EP  +
Sbjct: 6   LKEAEKRMKGAVAKFKEELTGIRTGRASTGLVENIKVDYYGSEIPLKQLATISTPEPSQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  V S+E+ + E+NLG NP  EG  +R+ +P  TEERR  +VK+ H +AE+++
Sbjct: 66  VIQTWDKSAVKSIEKALIEANLGANPQTEGNTIRLNLPPMTEERRKEVVKIIHKFAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN+RRD  ++++K +K G  SED V      +QK+TD  I+ I+   E K+KEI+  
Sbjct: 126 VAVRNVRRDEKENIEKLKKEG-FSEDDVKKALEKLQKLTDKYIEEINQLAEAKEKEILSI 184


>gi|326333657|ref|ZP_08199894.1| ribosome recycling factor [Nocardioidaceae bacterium Broad-1]
 gi|325948563|gb|EGD40666.1| ribosome recycling factor [Nocardioidaceae bacterium Broad-1]
          Length = 185

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L     +M  ++   ++D  T+R GR +P M + + V+ YG+  P+ Q+A+ T  EPR++
Sbjct: 6   LNEADSKMAKSVDSTREDFATIRAGRATPQMFNKILVDYYGTPTPIQQLASFTSPEPRII 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ +D   +A+VE+ I +S+LG+NP  +G++LR   PE TEERR   +K+A   AE+ +
Sbjct: 66  NIAPFDIGAMANVEKAIRDSDLGVNPSNDGKILRAVFPELTEERRKEYIKLAKEKAEQGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVR +R+     L+K  K G+AS+D V   E  +  +T      ID   + K+ E++  
Sbjct: 126 VSVRQVRQKAKQGLEKLEKDGEASKDDVTGAEKRLDSLTKKHTDAIDDLLKSKEAELLEV 185


>gi|150004420|ref|YP_001299164.1| ribosome recycling factor [Bacteroides vulgatus ATCC 8482]
 gi|212693687|ref|ZP_03301815.1| hypothetical protein BACDOR_03207 [Bacteroides dorei DSM 17855]
 gi|237708852|ref|ZP_04539333.1| ribosome recycling factor [Bacteroides sp. 9_1_42FAA]
 gi|254882855|ref|ZP_05255565.1| ribosome recycling factor [Bacteroides sp. 4_3_47FAA]
 gi|265755888|ref|ZP_06090355.1| ribosome recycling factor [Bacteroides sp. 3_1_33FAA]
 gi|294775495|ref|ZP_06741007.1| ribosome recycling factor [Bacteroides vulgatus PC510]
 gi|319643384|ref|ZP_07998010.1| ribosome-recycling factor [Bacteroides sp. 3_1_40A]
 gi|166230412|sp|A6L1H8|RRF_BACV8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|149932844|gb|ABR39542.1| ribosome recycling factor [Bacteroides vulgatus ATCC 8482]
 gi|212663746|gb|EEB24320.1| hypothetical protein BACDOR_03207 [Bacteroides dorei DSM 17855]
 gi|229457278|gb|EEO62999.1| ribosome recycling factor [Bacteroides sp. 9_1_42FAA]
 gi|254835648|gb|EET15957.1| ribosome recycling factor [Bacteroides sp. 4_3_47FAA]
 gi|263233966|gb|EEZ19567.1| ribosome recycling factor [Bacteroides sp. 3_1_33FAA]
 gi|294450640|gb|EFG19128.1| ribosome recycling factor [Bacteroides vulgatus PC510]
 gi|317385013|gb|EFV65966.1| ribosome-recycling factor [Bacteroides sp. 3_1_40A]
          Length = 186

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 107/180 (59%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   INDAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++R+ +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRIIEKAIMDSDLGITPENNGEIIRLGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN RRD +D LKK+ K G   ED   + E  +QK+ D  I  I+    EK KEIM  
Sbjct: 128 VSIRNARRDAIDTLKKAVKEG-MPEDEQKNAEAKLQKVHDKYIAKIEELLAEKDKEIMTV 186


>gi|116327676|ref|YP_797396.1| ribosome recycling factor [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330591|ref|YP_800309.1| ribosome recycling factor [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281654|sp|Q04U69|RRF_LEPBJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|122284528|sp|Q053N2|RRF_LEPBL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116120420|gb|ABJ78463.1| Ribosome recycling factor [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124280|gb|ABJ75551.1| Ribosome recycling factor [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 184

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 78/183 (42%), Positives = 121/183 (66%), Gaps = 2/183 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M     +  +K +M  TI  +KKD  T+RTGR +PS+++ ++V+ YG+  P+NQ+ N++V
Sbjct: 1   MASEEIISGMKTKMDKTIDLVKKDFGTVRTGRANPSLVEDIRVDYYGTLTPINQLGNISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRMLV+S +DK ++  +E+ I  S LGL P  +G V+RI +PE T ERR  L K+  +
Sbjct: 61  PEPRMLVISPYDKGIMKDIEKAIQASGLGLQPSNDGVVIRIIIPELTGERRKELAKIVKS 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E+ K+++RNIRRD M+ LKK   +   S+D + ++++ IQK TDS I  I +   EK+
Sbjct: 121 KSEEKKVAIRNIRRDAMEDLKKH--TEGLSQDEIKTIQDRIQKTTDSYIDKISALTAEKE 178

Query: 181 KEI 183
           KEI
Sbjct: 179 KEI 181


>gi|313207473|ref|YP_004046650.1| ribosome recycling factor [Riemerella anatipestifer DSM 15868]
 gi|312446789|gb|ADQ83144.1| ribosome recycling factor [Riemerella anatipestifer DSM 15868]
 gi|315023373|gb|EFT36383.1| Ribosome recycling factor [Riemerella anatipestifer RA-YM]
 gi|325335067|gb|ADZ11341.1| Ribosome recycling factor [Riemerella anatipestifer RA-GD]
          Length = 184

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 108/187 (57%), Gaps = 4/187 (2%)

Query: 1   MNQV-IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M ++ + L N +  M   I  L+   + +R GR S +M+  V VE YGS  PLNQVANV+
Sbjct: 1   MEEIQLILDNARQEMDAAIKHLEHAFLKIRAGRASTAMVQDVMVEYYGSPTPLNQVANVS 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           + +   + +  WD+  +  +E+GI  SNLG  P   G  + + VP  TEERR  L K A 
Sbjct: 61  IPDAMTIAIQPWDRSAIKDIEKGIINSNLGFAPSNNGDTIILNVPPLTEERRKDLAKQAK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A AE++K++VRN R+D M  LKK       SED++   EN++Q++TD  I  ID  ++ K
Sbjct: 121 AEAEQTKVTVRNARQDAMKDLKKL---DGVSEDIIKDTENEVQQLTDKYISTIDDHYKHK 177

Query: 180 KKEIMHF 186
           + +IM  
Sbjct: 178 EVDIMKI 184


>gi|145343357|ref|XP_001416314.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576539|gb|ABO94607.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 176

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 60/172 (34%), Positives = 104/172 (60%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM  T+  +  D  T+RTGR + ++LD ++V+ YG+  PL  +AN +  + + + +  +
Sbjct: 2   ERMEKTMDAIANDFSTVRTGRANAAVLDRIEVDYYGAPTPLKTIANASTPDAQTITIQPF 61

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  +  +ER I+ES+LG+NP  +G ++R+ VP  T ERR  L K+     E  K+++RN
Sbjct: 62  DKSAIKDIERAINESDLGMNPSNDGNIIRLNVPPLTAERRKELAKLVSKLGEDGKVALRN 121

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +RRD M   +K  K+G   ED +A L+  ++ +T S +K +D   + K+ E+
Sbjct: 122 VRRDAMKAYEKLEKAGSFGEDEIAKLKKSMEDLTASYVKKVDELTKAKETEL 173


>gi|320096225|ref|ZP_08027811.1| ribosome recycling factor [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319976851|gb|EFW08608.1| ribosome recycling factor [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 185

 Score =  214 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 101/180 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +D+M   +     +  ++RTGR + SM + + VE YG+  P+ Q+A+  + E R +
Sbjct: 6   LLEAEDKMDKAVDAASHEFASIRTGRATSSMFEQLSVEYYGAPTPMQQLASFQIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D+     + R + ES+LG+NP  +G V+R+ +P  TEERR   VK A + AE+ +
Sbjct: 66  IISPFDRTATQEILRTLRESDLGVNPTDDGNVIRVVLPALTEERRKEYVKQAKSKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVR +RR   D L + +K G+ASED V   E  +   T +    ID     K+ E++  
Sbjct: 126 VSVRGVRRKAKDQLDRLKKDGEASEDDVDRAEKALDAATRAHTDQIDKMLAAKESELLTI 185


>gi|281412821|ref|YP_003346900.1| ribosome recycling factor [Thermotoga naphthophila RKU-10]
 gi|281373924|gb|ADA67486.1| ribosome recycling factor [Thermotoga naphthophila RKU-10]
          Length = 185

 Score =  214 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 122/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M  T+  ++ ++  +RTG+ SP++L+ +KV+ YG   P+NQ+A ++V E R L
Sbjct: 6   IKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISVSEERTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ I+ S+LGLNPI +G V+R+  P  T E+R   VK A    E+ K
Sbjct: 66  VIKPWDKSVLSLIEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD +  +K+ +K GK  ED    LEN+IQK+TD  I+N+D  FE KK+EIM F
Sbjct: 126 IAIRNIRRDILKKIKEDQKEGKIPEDDAKRLENEIQKLTDEFIENLDKVFEIKKEEIMEF 185


>gi|284037276|ref|YP_003387206.1| ribosome recycling factor [Spirosoma linguale DSM 74]
 gi|283816569|gb|ADB38407.1| ribosome recycling factor [Spirosoma linguale DSM 74]
          Length = 186

 Score =  214 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 70/185 (37%), Positives = 113/185 (61%), Gaps = 2/185 (1%)

Query: 1   MNQV-IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M ++ + L + KD M   +  L  ++  +R G+ +  MLD ++VE YG   PL+ VA++ 
Sbjct: 1   MEEIELFLDDAKDTMEKALKHLAIELTKIRAGKANAGMLDGIQVEYYGMLSPLHTVASIN 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R +V+  +++++++ VE+ I  SNLGLNP  +G+ +R+ +P  TEERR  LVK   
Sbjct: 61  TPDARTIVIKPFERKLISEVEKAIRNSNLGLNPNNDGEQIRLSIPPLTEERRRDLVKKVK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E +K++VRNIR+D  D ++K  K G  SED V   E  +QK+TD+ I  ID  F  K
Sbjct: 121 QEVETAKVNVRNIRKDTNDDIRKLVKDG-VSEDAVKVGEERVQKLTDAFIARIDETFVAK 179

Query: 180 KKEIM 184
           +++IM
Sbjct: 180 ERDIM 184


>gi|148244406|ref|YP_001219100.1| ribosome recycling factor [Candidatus Vesicomyosocius okutanii HA]
 gi|166231527|sp|A5CXD6|RRF_VESOH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146326233|dbj|BAF61376.1| ribosome recycling factor [Candidatus Vesicomyosocius okutanii HA]
          Length = 185

 Score =  214 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           QN +++M  +I+ LK     +R  R  PS+L+ + +  YGS VPL+QVAN++  + R L 
Sbjct: 7   QNSQNKMNKSINSLKNAFSKIRASRAHPSLLEQIHINYYGSMVPLSQVANISTEDSRTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
            S W+K+MV+ +E+ I  S+LGLNP   GQV+RI +P  T+ERR  LVK+    AEK+KI
Sbjct: 67  ASPWEKDMVSVIEKAIMTSDLGLNPQTIGQVIRIHLPPLTQERRGELVKIIKDEAEKAKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RNIRRD     K+  K  + S+D     E DIQKITD  IK I+    +K+  ++  
Sbjct: 127 AIRNIRRDANSDFKELLKEKEISKDEARKAEYDIQKITDEYIKKIEINLNKKEDSLLEI 185


>gi|325849053|ref|ZP_08170545.1| ribosome recycling factor [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480298|gb|EGC83361.1| ribosome recycling factor [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 185

 Score =  214 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ +  M       +  +  +R GR + S+LD +    YGS  P+NQ A ++  EPR+L
Sbjct: 6   IKDTESAMKKACESFEIRISKIRAGRANDSILDGLTFSYYGSQTPINQAATISTPEPRLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  +  +E+ I++S++G+NP  +G+V+R+P P  TEERR  L K  + Y+E SK
Sbjct: 66  VIKPWDKSNIKEIEKAINKSDIGINPQNDGEVIRLPFPALTEERRKDLTKQVNDYSEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +RNIRRD +D  KK  KS   +ED + S+E DIQKIT   I NI+   E K KE++  
Sbjct: 126 IQIRNIRRDSLDVAKKGEKSADLTEDDLFSIEEDIQKITKKYIDNIEKIAENKNKELLEV 185


>gi|298207395|ref|YP_003715574.1| ribosome recycling factor [Croceibacter atlanticus HTCC2559]
 gi|83850031|gb|EAP87899.1| ribosome recycling factor [Croceibacter atlanticus HTCC2559]
          Length = 185

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + K+ M   I  L+K ++ +R G+ SP+ML  V V+ YGS  PLNQV NV   + R +
Sbjct: 9   IDSTKEDMEKAIKHLEKKLINIRAGKASPAMLSGVMVDYYGSPTPLNQVGNVNTPDARTI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  ++K M+  +E+ I  +NLG NP+  G+ + I VP  TEERR  L K A   AE+SK
Sbjct: 69  SIQPFEKSMIQEIEKAIMNANLGFNPMNNGESVIINVPPLTEERRKELAKQAKNEAEESK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I VRN R++    +KK      ASED+  + E D+Q +TD  I  ID  +  K+ EIM  
Sbjct: 129 IGVRNDRKNANQEIKKLE---DASEDLKKNAEIDVQNLTDKYIAKIDEVYAAKEVEIMKV 185


>gi|309791083|ref|ZP_07685618.1| ribosome recycling factor [Oscillochloris trichoides DG6]
 gi|308226867|gb|EFO80560.1| ribosome recycling factor [Oscillochloris trichoides DG6]
          Length = 185

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +  M      LK  + T+RTGR S  M++ ++VEAYG+H+PLNQ+AN++V E R++
Sbjct: 6   LREYEASMRKATEALKHHLATIRTGRASSGMVEHLQVEAYGTHMPLNQLANISVPESRLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D  M+  +E+ I  S+L +NP  +G+V+R+ VP+ TEERR  +VK+     E+ K
Sbjct: 66  VIQPFDNGMIKIIEKAIQNSDLSINPSNDGRVIRLAVPQLTEERRREMVKMVRHRVEEVK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ISVRN RRD +D LK+  +    SED +   +  IQ++T+ T K++D    EK+ E++  
Sbjct: 126 ISVRNQRRDAIDDLKQLEEEKLISEDDLHRGQERIQQLTERTSKDLDQIGSEKEAEVLAV 185


>gi|227875940|ref|ZP_03994063.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35243]
 gi|227843472|gb|EEJ53658.1| ribosome recycling factor [Mobiluncus mulieris ATCC 35243]
          Length = 185

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 98/180 (54%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ K +M   +   K +  T+RTGR + +M D + VE YGS  PL Q+A+  + E R +
Sbjct: 6   LKDTKTKMQKAVEATKDEFATIRTGRANAAMFDGIVVEYYGSPTPLKQLASFNIPEARTV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+     +   I ES+LG+ P  +G+ +R+ +P  TE+RR   VK A   AE+ +
Sbjct: 66  IIQPFDRNATQDIIHAISESDLGVTPTDDGKTIRVVLPALTEDRRKEYVKQAKTKAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+R IRR   D ++  +K     ED V     ++  +T      +D+  E+K+ ++M  
Sbjct: 126 VSIRGIRRKAKDAMEALKKDKTLGEDEVERGVKELDTVTKKFTDEVDTLLEDKETDLMTV 185


>gi|298383473|ref|ZP_06993034.1| ribosome recycling factor [Bacteroides sp. 1_1_14]
 gi|298263077|gb|EFI05940.1| ribosome recycling factor [Bacteroides sp. 1_1_14]
          Length = 186

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 111/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L N +++M   I +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   LDNAQEKMDMAIMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   +  E +K
Sbjct: 68  TIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKSEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRDG+D LKK+ K G  +ED   + E  +QKI D  IK I+    +K KEIM  
Sbjct: 128 VSVRNARRDGIDALKKAVKDG-LAEDEQKNAEAKLQKIHDKYIKQIEDMLADKDKEIMTV 186


>gi|19704944|ref|NP_602439.1| ribosome recycling factor (RRF) [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296329199|ref|ZP_06871700.1| ribosome recycling factor [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|22001936|sp|Q8R5Z9|RRF_FUSNN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|19712846|gb|AAL93738.1| Ribosome Recycling Factor (RRF) [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|296153555|gb|EFG94372.1| ribosome recycling factor [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 190

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 115/179 (64%), Gaps = 2/179 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  TI  +K+    +R GR + SMLD +KVE YGS VPLNQ+  V+  E R+L
Sbjct: 9   VKECEEKMVKTIEAVKEKFTAIRAGRANVSMLDGIKVENYGSEVPLNQIGTVSAPEARLL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ I  +N+G+ P  +G+V+R+ +PE T +RR   VK+A   AE  K
Sbjct: 69  VIDPWDKTLISKIEKAILAANIGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNEAENGK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I++RNIR+D  +HLKK  K  +   SED +   E ++Q +TD  +K ID    +K+KEI
Sbjct: 129 IAIRNIRKDINNHLKKLEKDKENPISEDELKKEETNVQTLTDKYVKEIDDLLAKKEKEI 187


>gi|322437107|ref|YP_004219319.1| ribosome recycling factor [Acidobacterium sp. MP5ACTX9]
 gi|321164834|gb|ADW70539.1| ribosome recycling factor [Acidobacterium sp. MP5ACTX9]
          Length = 194

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 69/190 (36%), Positives = 116/190 (61%), Gaps = 4/190 (2%)

Query: 1   MNQVIDLQNI----KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVA 56
           M  ++ L+++    K R   T+   + ++++ RTGR S  MLD VKV+ YG+  P++QVA
Sbjct: 5   MASIVALKDVHQQLKTRFEKTVDDFRANLLSARTGRASVHMLDQVKVDYYGTDTPISQVA 64

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVK 116
            +T  E ++++V  W++ +V ++E+ I  SN G NP+ +G+++R+P+P   EERR   VK
Sbjct: 65  QITTPEAQLILVQPWEQTLVTAIEKAIRTSNQGFNPMHDGRIIRVPIPPMNEERRKEAVK 124

Query: 117 VAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
                 E  K S+RNIRRDG + +KK+ K    S D       ++Q++TD+ IK ++  F
Sbjct: 125 NLAGVLEGHKTSMRNIRRDGNELIKKAAKDKLISADDEKRANEEVQQLTDAEIKRLEDLF 184

Query: 177 EEKKKEIMHF 186
           + K+KE+M  
Sbjct: 185 KAKEKELMTV 194


>gi|183221973|ref|YP_001839969.1| ribosome recycling factor [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189912041|ref|YP_001963596.1| ribosome recycling factor [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|190360250|sp|B0SDN4|RRF_LEPBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238687812|sp|B0SM63|RRF_LEPBP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|167776717|gb|ABZ95018.1| Ribosome recycling factor [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167780395|gb|ABZ98693.1| Ribosome recycling factor (Ribosome releasing factor; RRF)
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 183

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 72/177 (40%), Positives = 116/177 (65%), Gaps = 2/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++++ +M  T+  LKKD  T+RTG+ +P M++ V+V+ YG+  PLNQ+  +   EPR++
Sbjct: 6   IKSMQSKMDKTVDALKKDFGTIRTGKANPMMVEDVRVDYYGTLTPLNQLGKIACPEPRVI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ ++K M+  +E+ I  ++LGL P  +G  +RI +PE T ERR  L KV    AE+ K
Sbjct: 66  LITPFEKGMLKDIEKAIFAASLGLTPNNDGSSIRINIPELTGERRKELAKVVKQKAEEKK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRRD  D LKK +   + S+D V   ++ IQKITDS I  +    +EK+KEI
Sbjct: 126 VAIRNIRRDANDELKKHQ--SEMSQDEVKGHQDKIQKITDSYIAKLGDLEKEKEKEI 180


>gi|307637928|gb|ADN80378.1| Ribosome recycling factor [Helicobacter pylori 908]
 gi|325996531|gb|ADZ51936.1| Ribosome recycling factor [Helicobacter pylori 2018]
 gi|325998120|gb|ADZ50328.1| Ribosome recycling factor [Helicobacter pylori 2017]
          Length = 185

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  ++  L +D  TLR+ +VS ++LD +KV+ YG+  PLNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSVQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTPLNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTSEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  I+ ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNQVKKLEKDKEISEDESKKAQEQIQKITDEAIRKIDESVKNKEDAILKV 185


>gi|238898426|ref|YP_002924107.1| ribosome recycling factor [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259494545|sp|C4K5W6|RRF_HAMD5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229466185|gb|ACQ67959.1| ribosome recycling factor [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 185

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 67/178 (37%), Positives = 107/178 (60%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             + RM       +  +  +RTGR SPS+LD ++VE YG+  PL Q+AN+   +   L V
Sbjct: 8   ETQSRMEKCTESFESQIKKIRTGRASPSILDSIQVEYYGASTPLRQLANIVAEDSSHLAV 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +V+D+ +   +E+ I  S LGLNP     ++R+P+P  TE+RR  L+KV  + AE ++++
Sbjct: 68  TVFDRNLTPYIEKAIQNSPLGLNPSSAANLIRVPLPPLTEDRRKELIKVIRSEAEAARVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIR       K++ K  + SED    +++++QK+TD  IK ID F  +K+KE+M  
Sbjct: 128 VRNIRASVNKKSKETLKKKEISEDEDRQIQDNVQKLTDRYIKKIDEFLTKKEKEVMTV 185


>gi|326803584|ref|YP_004321402.1| ribosome recycling factor [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651583|gb|AEA01766.1| ribosome recycling factor [Aerococcus urinae ACS-120-V-Col10a]
          Length = 186

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 112/179 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
               K+RM  +   L+ ++  +R G  + S+L+ + VE YG   PLNQ+A++T+ EPRML
Sbjct: 7   FTETKNRMKKSEQSLQNELGKIRAGVANASLLNGIYVEYYGVDTPLNQIASITIPEPRML 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D+  + +++R I  S++G+ P  +G+ +R+ +P  T+ERR  L K+     E +K
Sbjct: 67  MVTPYDRSALDNIDRAIQMSDIGIAPTNDGEKIRLVIPALTQERRQELSKLVGRDLEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           I++RNIRRD  D +KK+ K G+ +ED     E ++QKITD   + ++    +K+ EI++
Sbjct: 127 IAIRNIRRDANDTIKKAEKDGEITEDDARRNEKEVQKITDEVTERLEKIASDKEDEILN 185


>gi|77457331|ref|YP_346836.1| ribosome recycling factor [Pseudomonas fluorescens Pf0-1]
 gi|123605788|sp|Q3KHA9|RRF_PSEPF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|77381334|gb|ABA72847.1| ribosome recycling factor [Pseudomonas fluorescens Pf0-1]
          Length = 185

 Score =  214 bits (545), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 101/179 (56%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ K+RM  ++  L  +   +RTG+  PS+L+ V V  YG+  P+ QVAN+TV + R L 
Sbjct: 7   KDAKERMTKSVESLAHNFGRIRTGQAHPSILEGVMVPYYGADTPIKQVANITVKDARTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+ +V++ I  + L LNP   G++L I +P  TEE R    K A   AE +++
Sbjct: 67  VVAFERNMLGAVDKAIGSAGLNLNPTNLGELLLISMPALTEETRRGFTKQARDVAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD    LK   K  + SED       +I  +T   +  ID+   EK+K++M  
Sbjct: 127 AVRNIRRDANSSLKDLVKEKEISEDEERRAAGEIDDLTKKFVAEIDAKLAEKEKDLMAV 185


>gi|15644151|ref|NP_229200.1| ribosome recycling factor [Thermotoga maritima MSB8]
 gi|170289219|ref|YP_001739457.1| ribosome recycling factor [Thermotoga sp. RQ2]
 gi|6831653|sp|Q9X1B9|RRF_THEMA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238688857|sp|B1LBS6|RRF_THESQ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|6730315|pdb|1DD5|A Chain A, Crystal Structure Of Thermotoga Maritima Ribosome
           Recycling Factor, Rrf
 gi|50513689|pdb|1T1M|C Chain C, Binding Position Of Ribosome Recycling Factor (Rrf) On The
           E. Coli 70s Ribosome
 gi|4981962|gb|AAD36470.1|AE001792_10 ribosome recycling factor [Thermotoga maritima MSB8]
 gi|170176722|gb|ACB09774.1| ribosome recycling factor [Thermotoga sp. RQ2]
          Length = 185

 Score =  214 bits (545), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 120/180 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M  T+  ++ ++  +RTG+ SP++L+ +KV+ YG   P+NQ+A +++ E R L
Sbjct: 6   IKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISISEERTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +++ +E+ I+ S+LGLNPI +G V+R+  P  T E+R   VK A    E+ K
Sbjct: 66  VIKPWDKSVLSLIEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR+ +  +K+ +K G   ED    LEN+IQK+TD  I+ +D  FE KK+EIM F
Sbjct: 126 IAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVFEIKKEEIMEF 185


>gi|153954045|ref|YP_001394810.1| ribosome recycling factor [Clostridium kluyveri DSM 555]
 gi|219854658|ref|YP_002471780.1| hypothetical protein CKR_1315 [Clostridium kluyveri NBRC 12016]
 gi|189044051|sp|A5N831|RRF_CLOK5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|254809504|sp|B9E1J1|RRF_CLOK1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146346926|gb|EDK33462.1| Frr [Clostridium kluyveri DSM 555]
 gi|219568382|dbj|BAH06366.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 185

 Score =  214 bits (545), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M  T+  L K++ +++ GR +P++LD ++VE YG+  P++Q+A +++ E R+L
Sbjct: 6   LNKADEKMNKTVDVLVKELASMKAGRANPAILDKIEVEYYGAMTPISQLAGISIPEARIL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  + S+E+ I +S+LG+NP  +G+++R+ +PE TEE R  +VK      E SK
Sbjct: 66  AIQPWDKSALKSIEKAILKSDLGINPSNDGEIIRLIIPELTEETRKNIVKNIKKTGEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R IRR+  D  K  +K    SED +   E  IQK TD  IKNID+  E+K+KEIM  
Sbjct: 126 VAIRGIRRECNDKFKALKKKNDISEDEIKKGEEQIQKKTDIFIKNIDAILEKKEKEIMSL 185


>gi|237724285|ref|ZP_04554766.1| ribosome-recycling factor [Bacteroides sp. D4]
 gi|229437473|gb|EEO47550.1| ribosome-recycling factor [Bacteroides dorei 5_1_36/D4]
          Length = 186

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 108/180 (60%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + + +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   INDAQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++R+ +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRIIEKAIMDSDLGITPENNGEIIRLGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN RRD +D LKK+ K G   ED   + E  +QK+ D  I+ I+    EK KEIM  
Sbjct: 128 VSIRNARRDAIDTLKKAVKEG-MPEDEQKNAEAKLQKVHDKYIEKIEELLAEKDKEIMTV 186


>gi|320527474|ref|ZP_08028655.1| ribosome recycling factor [Solobacterium moorei F0204]
 gi|320132187|gb|EFW24736.1| ribosome recycling factor [Solobacterium moorei F0204]
          Length = 182

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 67/174 (38%), Positives = 100/174 (57%), Gaps = 3/174 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   I  L+ ++ T+RTG  +  MLD V+V+ YGS  PLNQ+A ++V E R LV+  +D
Sbjct: 12  KMDKVIDHLQSELNTVRTGAANVKMLDRVEVDYYGSPTPLNQIAALSVSEGRTLVIKPYD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
              + ++E   +E++LG+ P  +G V+R+ VP+ T E R  + K      E+ KI +RNI
Sbjct: 72  PSSLKAIEHACNEADLGIAPSNDGTVIRLTVPQLTGETRKEMTKKVDKMGEECKIQIRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RRD M  +K   K     ED+    EN+IQK+TD  IK ID     K  E++  
Sbjct: 132 RRDAMSVVK---KDKTMDEDIQKDCENEIQKLTDKYIKKIDDLAAAKSAEVLKV 182


>gi|57505745|ref|ZP_00371671.1| ribosome recycling factor [Campylobacter upsaliensis RM3195]
 gi|57016018|gb|EAL52806.1| ribosome recycling factor [Campylobacter upsaliensis RM3195]
          Length = 185

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 111/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD ++V+ YGS  PLNQVA V  
Sbjct: 2   LNEIYEKQKTQA--EKSLEALKKDFTTLRTGKVNVHILDPIQVDYYGSATPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++E  I  +N+G+NP  +G+ +++  P  T+E+R   VK A A
Sbjct: 60  SDASTISITPWEKPMLKAIESAIAAANIGVNPNNDGESVKLFFPPMTKEQREENVKHAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RN R+D  D +KK  K    SED      +++QK+TD     ID   ++K+
Sbjct: 120 MGEKAKVSIRNGRKDANDTIKKLEKDKAISEDEAKKAYDEVQKLTDLYTHKIDESVKDKE 179

Query: 181 KEIMHF 186
            +++  
Sbjct: 180 TQLLKV 185


>gi|225849796|ref|YP_002730030.1| ribosome recycling factor [Persephonella marina EX-H1]
 gi|225646194|gb|ACO04380.1| ribosome recycling factor [Persephonella marina EX-H1]
          Length = 184

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + RM   +   K+++ ++RTGR S  +++ +KV+ YG+ +PL Q+A++T  EP  +
Sbjct: 6   LKDAEKRMKKAVEKFKEELASIRTGRASVGLVENIKVDYYGAEMPLKQIASITTPEPSQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WD+  V ++E+ + E+NLG NP  EG ++R+ +P  TEERR  +VK+    AE+++
Sbjct: 66  LIQAWDQNAVPAIEKALQEANLGANPQTEGNLIRLILPPMTEERRREIVKMLGKMAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  + ++  +K G  SED V      +QKITD  IK I+     K++EI+  
Sbjct: 126 IAIRNIRRDDKERIEDLKKEG-FSEDEVKKALEQLQKITDKYIKQINDLATAKEEEILSI 184


>gi|81428873|ref|YP_395873.1| ribosome recycling factor (ribosome releasing factor) (RRF)
           [Lactobacillus sakei subsp. sakei 23K]
 gi|123564051|sp|Q38W67|RRF_LACSS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78610515|emb|CAI55566.1| Ribosome recycling factor (ribosome releasing factor) (RRF)
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 185

 Score =  213 bits (544), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 65/179 (36%), Positives = 115/179 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K+ M    + L++ +  +R GR + S+++ V VE YG+  PLNQ+A +T+ E R+L
Sbjct: 6   LEQAKENMEKAEASLRRTLGQIRAGRANASLVNRVNVEYYGAMTPLNQIAAITIPEARVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +E+ ++ +++G++P  +G V+R+ +P+ T ERR  + K     AE +K
Sbjct: 66  LITPYDKGALEDIEKALYTADIGISPANDGSVIRLVIPQLTGERRKEIAKEVGKEAELAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           + VRN RRD MD+LKK+ K+ + SED +  LE  +Q +T+   K ID+  ++K+KEI  
Sbjct: 126 VVVRNARRDAMDNLKKAEKASEISEDEMHDLEEQVQNLTNEATKKIDAISKDKEKEITE 184


>gi|118474254|ref|YP_892896.1| ribosome recycling factor [Campylobacter fetus subsp. fetus 82-40]
 gi|166230773|sp|A0RRR3|RRF_CAMFF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|118413480|gb|ABK81900.1| ribosome recycling factor [Campylobacter fetus subsp. fetus 82-40]
          Length = 185

 Score =  213 bits (544), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 62/172 (36%), Positives = 101/172 (58%)

Query: 15  GDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKE 74
              +  LK+D  TLRTG+V+ +++D + V+ YGS   LNQVA V   +   + +S W+K 
Sbjct: 14  DKALEVLKRDFTTLRTGKVNINIVDHINVDYYGSPTALNQVATVLATDASTISISPWEKT 73

Query: 75  MVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRR 134
           M+ ++   I  +N+G+NP  +G  +++  P  T E R    K A +  EK+K+++RNIR+
Sbjct: 74  MLKAISSAIQAANIGVNPNNDGDSVKLFFPPMTTEDRQKNAKEARSMGEKAKVAIRNIRK 133

Query: 135 DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           D  D +KK  K    SED +    +++QKITDS I  ID   ++K+ E++  
Sbjct: 134 DANDDIKKIEKDKSVSEDEIKKGYDEVQKITDSYISKIDQLVKDKEAELLKV 185


>gi|323359725|ref|YP_004226121.1| ribosome recycling factor [Microbacterium testaceum StLB037]
 gi|323276096|dbj|BAJ76241.1| ribosome recycling factor [Microbacterium testaceum StLB037]
          Length = 184

 Score =  213 bits (544), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 62/181 (34%), Positives = 100/181 (55%), Gaps = 3/181 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +   RM   +   K+D  T+RTGR +P M   V V+ YGS  PL Q+A++   E R L
Sbjct: 6   LADAGARMDRAVEAAKEDFATVRTGRANPQMFQKVLVDYYGSPTPLAQLASLNNPEARTL 65

Query: 67  VVSVWDKEMVASVERGIHES-NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           V++ +DK  + ++E+ I +  NLG+NP  +G ++RI +PE TEERR   VK+     E +
Sbjct: 66  VINPYDKSALKAIEQAIRDMPNLGVNPTNDGNIVRITMPELTEERRKEYVKLVRGKGEDA 125

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+ +RN+RR   D L   +      ED +   E ++  +T + +  ID   + K+ E++ 
Sbjct: 126 KVQIRNLRRKAKDDLDALKSD--VGEDELVRAEKELDGVTRAHVDQIDEALKRKEAELLE 183

Query: 186 F 186
            
Sbjct: 184 V 184


>gi|317014647|gb|ADU82083.1| ribosome recycling factor [Helicobacter pylori Gambia94/24]
          Length = 185

 Score =  213 bits (543), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  ++  L +D  TLR+ +VS +++D +KV+ YG+  PLNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSVQALNRDFSTLRSAKVSVNIVDHIKVDYYGTPTPLNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNQVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV 185


>gi|154149092|ref|YP_001405963.1| ribosome recycling factor [Campylobacter hominis ATCC BAA-381]
 gi|166230774|sp|A7I0C2|RRF_CAMHC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|153805101|gb|ABS52108.1| ribosome recycling factor [Campylobacter hominis ATCC BAA-381]
          Length = 185

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 109/186 (58%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N V D Q  K      ++ LK+D  TLRTG+VS  +L+ + V+ Y +  PLNQVA V  
Sbjct: 2   LNSVYDAQ--KSDCNKALNALKRDFSTLRTGKVSVKILENIFVDYYDNQTPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + V+ W+K M+  +E  I  +N+G+NP  +G+ +++  P  T E+R    K A A
Sbjct: 60  TDATTISVTPWEKSMLKGIESAIAAANIGVNPTNDGESVKLFFPPMTTEQRKENAKKAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RNIR+D  D +KK  K    SED      +++QKITD+ I+ ID   + K+
Sbjct: 120 MGEKAKVSIRNIRKDANDGVKKLEKDKSISEDEAKKAYDEVQKITDNFIEKIDEAVKNKE 179

Query: 181 KEIMHF 186
           +E++  
Sbjct: 180 EELLKV 185


>gi|162454452|ref|YP_001616819.1| hypothetical protein sce6172 [Sorangium cellulosum 'So ce 56']
 gi|189044078|sp|A9GGK7|RRF_SORC5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|161165034|emb|CAN96339.1| rrf [Sorangium cellulosum 'So ce 56']
          Length = 185

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 105/180 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++ +++ +   I  L++D+  +RTGR + +MLD ++V+ YG   P+ Q+A V+V EPR++
Sbjct: 6   IKELREGIEKAIEALRRDLAKVRTGRANAAMLDGIRVDYYGVPTPIVQMATVSVPEPRLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  W+K  V ++E+ I ES+LGLNP V+  ++R+P+P  TEERR  +VK+     E  K
Sbjct: 66  SVKPWEKNQVKAIEKAIRESDLGLNPQVDADLIRLPIPPLTEERRREMVKLTKKNGEDCK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R  RRD  + +    K G  S D     +  +  +     K +D+    K+K+I+  
Sbjct: 126 VAIRKHRRDANEMIDSLEKDGDVSGDEADRAKKKVDDVVAEGTKLVDTVIAGKEKDILDV 185


>gi|325853886|ref|ZP_08171402.1| ribosome recycling factor [Prevotella denticola CRIS 18C-A]
 gi|327313933|ref|YP_004329370.1| ribosome recycling factor [Prevotella denticola F0289]
 gi|325484223|gb|EGC87153.1| ribosome recycling factor [Prevotella denticola CRIS 18C-A]
 gi|326945432|gb|AEA21317.1| ribosome recycling factor [Prevotella denticola F0289]
          Length = 186

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM     +L  ++  +R GR + ++LD V+V++YGS VPLNQVA V V + R +
Sbjct: 8   LNDAGERMEMAAMYLGDELQRIRAGRANVAILDGVRVDSYGSKVPLNQVATVMVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIKPWDRKAIKDIEKAIMDSDVGITPENNGEMIRLNLPQPTEERRRELVKQCNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +RN+R D  D LKK+ K G  SED     END+QK+ D  IK +D+  EEK+KEIM  
Sbjct: 128 VEIRNVRSDIKDKLKKAIKDG-LSEDNEKDAENDLQKLHDKYIKQVDALLEEKQKEIMTV 186


>gi|196234716|ref|ZP_03133527.1| ribosome recycling factor [Chthoniobacter flavus Ellin428]
 gi|196221224|gb|EDY15783.1| ribosome recycling factor [Chthoniobacter flavus Ellin428]
          Length = 186

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 117/186 (62%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L   +  M     +++ +   +RTG+ SP++++ + VEAYGS + L Q+A +T 
Sbjct: 1   MDPDETLLETEASMEKGFEYMQHEFAAVRTGKASPALVENIDVEAYGSQMKLKQLALITT 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+LV+  +D      +ER I ES +G+NP V+G+++R+P+P  +EERR  LVK    
Sbjct: 61  PEPRLLVIQPFDGSTTKDIERAIKESKIGINPAVDGKIIRLPIPALSEERRKDLVKGIKQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++++ +R+ RRDG+D LKK++K GK +ED + S E +IQK+TD   K ID     K+
Sbjct: 121 MAEEARVRIRSARRDGIDGLKKAQKDGKITEDDLESYEKEIQKLTDGFTKKIDDAVNAKE 180

Query: 181 KEIMHF 186
            +I+  
Sbjct: 181 ADILKV 186


>gi|160915170|ref|ZP_02077383.1| hypothetical protein EUBDOL_01178 [Eubacterium dolichum DSM 3991]
 gi|158432969|gb|EDP11258.1| hypothetical protein EUBDOL_01178 [Eubacterium dolichum DSM 3991]
          Length = 180

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 110/180 (61%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + +M   +  L++++ T+RTG  + ++L+ V  E YGS +P+NQ+A + V+E R L
Sbjct: 4   MQTAEHKMQSAVEVLEQELKTIRTGMANAAILEHVTFEYYGSPMPINQMAGIKVVEGRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK  +  +ER I  S++GL P  +G  +R+ VP  TEERR   VK A    E +K
Sbjct: 64  MITPYDKGTLKDIERAIAMSDIGLVPQNDGDCIRLNVPALTEERRKEFVKDASKMGENAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RN+RRD  D +K   K  + +ED    L++ IQK+TD  +K ++   + K KEI+  
Sbjct: 124 IAIRNVRRDANDTIK---KDKELTEDESKDLQDKIQKLTDKFVKLVEQAVDAKSKEILKV 180


>gi|315637821|ref|ZP_07893011.1| ribosome recycling factor [Campylobacter upsaliensis JV21]
 gi|315482062|gb|EFU72676.1| ribosome recycling factor [Campylobacter upsaliensis JV21]
          Length = 185

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 111/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ + Q  +     ++  LKKD  TLRTG+V+  +LD ++V+ YGS  PLNQVA V  
Sbjct: 2   LNEIYEKQKAQA--EKSLEALKKDFTTLRTGKVNVHILDPIQVDYYGSATPLNQVATVLA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + ++ W+K M+ ++E  I  +N+G+NP  +G+ +++  P  T+E+R   VK A A
Sbjct: 60  SDASTISITPWEKLMLKAIESAIAAANIGVNPNNDGESVKLFFPPMTKEQREENVKHAKA 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             EK+K+S+RN R+D  D +KK  K    SED      +++QK+TD     ID   ++K+
Sbjct: 120 MGEKAKVSIRNGRKDANDTIKKLEKDKAISEDEAKKAYDEVQKLTDLYTHKIDESVKDKE 179

Query: 181 KEIMHF 186
            +++  
Sbjct: 180 TQLLKV 185


>gi|149921516|ref|ZP_01909967.1| ribosome recycling factor [Plesiocystis pacifica SIR-1]
 gi|149817591|gb|EDM77059.1| ribosome recycling factor [Plesiocystis pacifica SIR-1]
          Length = 185

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/178 (40%), Positives = 114/178 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +D M      L +++  +R GR +P++LD V+VEAYG  + L +VA V+  + R+L
Sbjct: 6   LELAEDAMKSAQERLARELSRVRAGRANPALLDGVRVEAYGVQMSLREVATVSTADARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +D   ++SVE+ I  S LGLNP  +G VLR+P+P  TEERR +LVK     AE++K
Sbjct: 66  IVKPFDANTISSVEKAIMNSGLGLNPSSDGVVLRVPIPPLTEERRRSLVKQVKDQAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           I++R+ RR+G D LK + K  + SED +    + +Q++T+  +  IDS  ++K+ EIM
Sbjct: 126 IAIRSGRREGNDLLKGAEKDKEISEDELKRGLDKVQELTNRYVAMIDSAVKKKESEIM 183


>gi|187251116|ref|YP_001875598.1| ribosome recycling factor [Elusimicrobium minutum Pei191]
 gi|186971276|gb|ACC98261.1| Ribosome recycling factor [Elusimicrobium minutum Pei191]
          Length = 187

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 116/180 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K  M D +  LK+D+ T+RTGR S  +++ ++V+ YG+  PL Q+A + V + R L
Sbjct: 8   ISKSKTGMNDHVERLKRDLGTIRTGRASTQLIENIRVDYYGTPTPLKQMAMINVTDARTL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +S WD   +  +++ + +++LG +P+ +G+++RI +P  TE+RR  LVK     +E  K
Sbjct: 68  EISPWDISALNEIDKTLQKADLGASPVNDGKIIRIVLPNMTEDRRKMLVKNVSKMSEDFK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN RRD ++ LKK++K+G+ +ED +   E DIQK TDST+  ID    +K+KEIM  
Sbjct: 128 VAVRNERRDVLEKLKKAQKAGEITEDDLKRYEGDIQKATDSTVALIDKTISDKEKEIMTI 187


>gi|282878181|ref|ZP_06286977.1| ribosome recycling factor [Prevotella buccalis ATCC 35310]
 gi|281299599|gb|EFA91972.1| ribosome recycling factor [Prevotella buccalis ATCC 35310]
          Length = 186

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 78/180 (43%), Positives = 117/180 (65%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ  ++RM    +FL++ +  +R GR + ++LD V V +YGS VPLNQVANV+V + R +
Sbjct: 8   LQGAEERMQMATTFLEEQLNRIRAGRANVAILDGVMVSSYGSMVPLNQVANVSVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   EKSK
Sbjct: 68  AIKPWDRKAIRDIEKAIMDSDVGITPENNGEIIRLGIPQPTEERRRDLVKQCNKIGEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I VRN+R +  D LKK+ K G  SED     EN++QKI D  IK +D+  E+K KEIM  
Sbjct: 128 IEVRNVRSEIKDKLKKAIKDG-LSEDAGKDAENELQKIHDKFIKQVDNLLEDKTKEIMTV 186


>gi|317011456|gb|ADU85203.1| ribosome recycling factor [Helicobacter pylori SouthAfrica7]
          Length = 185

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L ++  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALSREFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERAIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     ++ IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKVKKLEKDKEISEDESKKAQDQIQKITDEAIKKIDESVKNKEDAILKV 185


>gi|325298509|ref|YP_004258426.1| Ribosome-recycling factor [Bacteroides salanitronis DSM 18170]
 gi|324318062|gb|ADY35953.1| Ribosome-recycling factor [Bacteroides salanitronis DSM 18170]
          Length = 186

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 104/180 (57%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   I +L+  +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 8   LSSAEEKMDMAIMYLEDALAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRIIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRD +D LKK+ K G   ED   + E  +QK  D  IK ID     K KEIM  
Sbjct: 128 VSVRNARRDAIDALKKAVKDG-MPEDEQKNSEAKLQKTHDKYIKQIDDLLAAKDKEIMTV 186


>gi|193212052|ref|YP_001998005.1| ribosome recycling factor [Chlorobaculum parvum NCIB 8327]
 gi|238692606|sp|B3QL17|RRF_CHLP8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|193085529|gb|ACF10805.1| ribosome recycling factor [Chlorobaculum parvum NCIB 8327]
          Length = 186

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q I+ RM  TI   + ++ ++RTG+ + ++LD VKVEAYGS +PL QV NV VL+   L
Sbjct: 7   IQKIEPRMKKTIEAFQHEIASIRTGKATTALLDRVKVEAYGSQMPLKQVGNVGVLDVHTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWDK MV +VER I ++NLGLNP  +GQ +RI +P  TEERR   VK+   + E SK
Sbjct: 67  SVQVWDKSMVGAVERAIRDANLGLNPSADGQTVRISIPPLTEERRKEYVKLTKKFGEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN RRD +  L K  K    SED     + +   +     K I     +K+KEIM  
Sbjct: 127 VSLRNHRRDLIHELDKLEKEKAISEDDKNHGKKEADDLVHKYEKKITEMIAQKEKEIMEV 186


>gi|218129178|ref|ZP_03457982.1| hypothetical protein BACEGG_00753 [Bacteroides eggerthii DSM 20697]
 gi|217988556|gb|EEC54876.1| hypothetical protein BACEGG_00753 [Bacteroides eggerthii DSM 20697]
          Length = 212

 Score =  212 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/187 (40%), Positives = 109/187 (58%), Gaps = 2/187 (1%)

Query: 1   MNQVID-LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  V D L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA VT
Sbjct: 27  MKDVKDILDEAQEKMDMAVMYLEESLAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVT 86

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R + +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   
Sbjct: 87  TPDARSIAIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCK 146

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             +E +K+SVRN RRD +D LKKS K G  +ED     E  +QKI D  IK ID     K
Sbjct: 147 NESETAKVSVRNARRDAIDALKKSVKEG-LAEDAQKGGEEKLQKIHDKYIKQIDDMLAAK 205

Query: 180 KKEIMHF 186
            KEIM  
Sbjct: 206 DKEIMTV 212


>gi|333029799|ref|ZP_08457860.1| Ribosome-recycling factor [Bacteroides coprosuis DSM 18011]
 gi|332740396|gb|EGJ70878.1| Ribosome-recycling factor [Bacteroides coprosuis DSM 18011]
          Length = 185

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 111/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +    + M   I +L++ +  +R G+ +P +LD ++V++YGS +P+N VA VT  + R +
Sbjct: 7   INEATENMELAIDYLEESLSHIRAGKANPKLLDGIRVDSYGSLMPINNVAAVTTPDARSI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  WDK M + +E+ I +S+LG+ P   G+V+RI +P  TEERR+ L K      E +K
Sbjct: 67  LIKPWDKSMFSVIEKAIIDSDLGIMPENNGEVIRIGIPPLTEERRIQLTKQCRGEGETAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ISVRN RRDG+D+LKK+ K G   ED   S E  +QK+ D  IK I+    EK +EIM  
Sbjct: 127 ISVRNARRDGIDYLKKAVKEG-LPEDAQKSGEEKLQKLHDKFIKKIEELLNEKDQEIMTV 185


>gi|299141583|ref|ZP_07034719.1| ribosome recycling factor [Prevotella oris C735]
 gi|298576919|gb|EFI48789.1| ribosome recycling factor [Prevotella oris C735]
          Length = 186

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM     +L  ++  +R GR + ++LD VKV++YGS VPLNQVA V+  + R +
Sbjct: 8   LSDAQERMEMAAMYLADELTHIRAGRANTAILDGVKVDSYGSKVPLNQVATVSTPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+V+R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIRPWDKKAIKDIEKAIMDSDVGITPENNGEVIRLGIPQPTEERRKELVKQCNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+R +  D LKK+ K G  SED+    END+QK+ D  IK ID    EK+KEIM  
Sbjct: 128 VEVRNVRGEVKDKLKKAIKDG-LSEDLEKDAENDLQKVHDKFIKKIDELLTEKQKEIMTV 186


>gi|325478712|gb|EGC81823.1| ribosome recycling factor [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 186

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +D M   +   +  + T++ GR + ++LD +    YG+  P+NQ A V+V E R+L+
Sbjct: 8   KQAQDEMAKAVDSFENRIATIKAGRATEAVLDGITFSYYGTETPINQAATVSVPEARLLM 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +  +E+ I +SN+G+ P  +G+V+R+P P+ TEERR    K    YAE +KI
Sbjct: 68  IKPWDKSNIGPIEKAILKSNIGITPQNDGEVIRLPFPQLTEERRKEYTKQVDTYAEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RN RR+ MD +KKS KSG  +ED   +LE++IQKI D  I+ +++   +K KE+M  
Sbjct: 128 VIRNKRREAMDEVKKSEKSGDVTEDDRYTLEDEIQKIADKNIEEVEALANKKNKELMSV 186


>gi|296123507|ref|YP_003631285.1| ribosome recycling factor [Planctomyces limnophilus DSM 3776]
 gi|296015847|gb|ADG69086.1| ribosome recycling factor [Planctomyces limnophilus DSM 3776]
          Length = 186

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/185 (32%), Positives = 110/185 (59%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L + ++RM      L+  ++ LRTGR + S++D ++VE YGS  P+ Q+A V+V
Sbjct: 1   MDPDEILFDAEERMDKAAQVLQDQLVGLRTGRANASLVDSIRVEYYGSPTPIKQLATVSV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP+ +++  +D+ +++ + + I  S++GL P  +G+V+R+ VP  + ERR  +V     
Sbjct: 61  PEPQQIMIKPFDQSILSEIGKAIQASDVGLAPNNDGRVIRLNVPPLSTERRKQIVARVKE 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE +++++RNIRRD   H   + K    SED+  S +  +Q++T      +++  E K+
Sbjct: 121 MAEDARVAIRNIRRDANKHADTALKDKLMSEDIHESTKESVQELTKKYEGKVNTVAEAKE 180

Query: 181 KEIMH 185
           KE+M 
Sbjct: 181 KEVME 185


>gi|110004372|emb|CAK98710.1| ribosome recycling factor protein [Spiroplasma citri]
          Length = 182

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 66/186 (35%), Positives = 111/186 (59%), Gaps = 4/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+Q + +   K++M   I   + +++ +RTGR +P+ML  + ++ YG+  P+ Q+AN+ V
Sbjct: 1   MSQEV-INQTKEKMEKVIVSFENELIKIRTGRANPNMLSHIMIDYYGTLTPIQQLANIMV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R LV+  +D+ ++  +   I++++LGL P  E  ++R+ +P  TEERR  LVK    
Sbjct: 60  PEARQLVIKPYDRSIINLILTAINKADLGLTPSSEADLIRLNIPPLTEERRKMLVKEMWK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E+ K+++RN RRD  +HLK   K    +ED     E ++QK+TD  IK ID     K+
Sbjct: 120 ASEQFKVAIRNERRDSNEHLK---KDSDLTEDDKKYYEGEVQKLTDQFIKKIDEKATLKE 176

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 177 KELMEV 182


>gi|89889410|ref|ZP_01200921.1| ribosome recycling factor [Flavobacteria bacterium BBFL7]
 gi|89517683|gb|EAS20339.1| ribosome recycling factor [Flavobacteria bacterium BBFL7]
          Length = 184

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 77/188 (40%), Positives = 114/188 (60%), Gaps = 6/188 (3%)

Query: 1   MNQVIDL--QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ ++L     K+ M   I  L+K ++ +R G+ SP+ML  V V+ YGS  PL QVANV
Sbjct: 1   MNEELELVIDACKEGMDSAIVHLEKQLLNIRAGKASPAMLGSVFVDYYGSQTPLGQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + V+ W+K M+  +E+GI  +NLGLNP+  G+ + I VP  TEERR+ L K +
Sbjct: 61  AAPDARTITVTPWEKGMITEIEKGIMYANLGLNPMNNGESVIINVPALTEERRIDLAKQS 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            +  E++KI VRN R+  M+ LKK       SED++ S E ++Q++T+S I  ID     
Sbjct: 121 KSEGEEAKIGVRNDRKTAMNDLKKL----GLSEDLLKSSEEEVQELTNSYIAKIDKIVAV 176

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 177 KEAEIMKV 184


>gi|223985634|ref|ZP_03635684.1| hypothetical protein HOLDEFILI_02990 [Holdemania filiformis DSM
           12042]
 gi|223962401|gb|EEF66863.1| hypothetical protein HOLDEFILI_02990 [Holdemania filiformis DSM
           12042]
          Length = 182

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/186 (39%), Positives = 110/186 (59%), Gaps = 5/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +++D  N + +M   I    + + T+RTGR +  ML  V+ + YG   P+NQ++++TV
Sbjct: 2   MKEILD--NSRSKMQKAIDTFSEHLETIRTGRANAGMLAGVEADYYGCPTPINQISSITV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           +E R LVV  +D   + ++E  I++S+LGLNP  +G V+RI VP  TEE R  L K    
Sbjct: 60  VEGRQLVVKPYDSSSLKAIEHAINKSDLGLNPQNDGSVIRINVPALTEETRKELCKKVSK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E++KI+VRN+RRD  +  K   K    +ED        IQK+TD  IK +DS   EK+
Sbjct: 120 LSEEAKIAVRNLRRDANEIAK---KDDTLTEDAEKECLEKIQKLTDEMIKKVDSVAAEKE 176

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 177 KEIMTV 182


>gi|88802057|ref|ZP_01117585.1| ribosome releasing factor [Polaribacter irgensii 23-P]
 gi|88782715|gb|EAR13892.1| ribosome releasing factor [Polaribacter irgensii 23-P]
          Length = 184

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/188 (39%), Positives = 116/188 (61%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M++ ++  +   K+ MGD I+ L+K++  +R G+ +P+ML  V V+ YGS  PL+QVANV
Sbjct: 1   MSEEVEFIIDTTKEAMGDAIAHLEKELRAIRAGKATPAMLANVMVDYYGSQTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              +PR + +  W+K M+  +E+ I  +NLG NP+  G ++ I VP  TEERR+ L K A
Sbjct: 61  NTPDPRTIAIQPWEKSMLQPIEKAIMAANLGFNPMNNGDIIMINVPPLTEERRIGLAKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE +K+ +RN R+D  + +KK+      S+D+    E DIQ +TDS +K I+     
Sbjct: 121 KAEAEHAKVGIRNARKDANNDIKKT----DISDDLKKDSELDIQNLTDSFVKVIEEKLAV 176

Query: 179 KKKEIMHF 186
           K++EIM  
Sbjct: 177 KEREIMTV 184


>gi|288800846|ref|ZP_06406303.1| ribosome recycling factor [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288332307|gb|EFC70788.1| ribosome recycling factor [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 186

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 114/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM     +L++ +  +R GR + ++LD V+V +YGS VPLNQVANV+  +PR +
Sbjct: 8   LTDAGERMEMAALYLEEQLSRIRAGRANIAILDGVRVSSYGSMVPLNQVANVSAPDPRTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            ++ WDK+ +  +E+ I +S++G+ P   G+V+R+ +P+ TEERR  L K  +   EK K
Sbjct: 68  AIAPWDKKTIRDIEKAIMDSDVGITPENNGEVIRLNIPQPTEERRRELAKQCNKIGEKIK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I VRN+R D  D LKK+ K G  SED     EN++QKI D  IK ++    EK+KEIM  
Sbjct: 128 IEVRNVRSDIKDKLKKAIKDG-LSEDNEKDAENELQKIHDKYIKRVEDLLAEKEKEIMTV 186


>gi|312131765|ref|YP_003999105.1| ribosome recycling factor [Leadbetterella byssophila DSM 17132]
 gi|311908311|gb|ADQ18752.1| ribosome recycling factor [Leadbetterella byssophila DSM 17132]
          Length = 186

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/187 (36%), Positives = 111/187 (59%), Gaps = 2/187 (1%)

Query: 1   MNQV-IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M ++ + L   ++ M   I   + ++  +R GR S +MLD V VE YG   PL+QV++VT
Sbjct: 1   MEEIDLILDLTQESMEKVIKHTQIELSKIRAGRASTNMLDGVLVEYYGVMSPLSQVSSVT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R + +  ++K++++ +ER I  SN+GLNP  +G+ +R+ VP  TEERR  LVK   
Sbjct: 61  TPDARTIQIKPFEKKIISDIERAIINSNIGLNPANDGETIRLNVPPLTEERRRELVKRVK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A  E +K+ +R +R++  D LKK +  G  SED + S E  +QK+T+  I+ +D     K
Sbjct: 121 AEIEVAKVGIRKVRQEMNDDLKKLKNDG-VSEDAIKSGEEKVQKLTNQYIEKVDQLLAAK 179

Query: 180 KKEIMHF 186
           + +IM  
Sbjct: 180 EADIMQV 186


>gi|226227179|ref|YP_002761285.1| ribosome recycling factor [Gemmatimonas aurantiaca T-27]
 gi|226090370|dbj|BAH38815.1| ribosome recycling factor [Gemmatimonas aurantiaca T-27]
          Length = 184

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 80/180 (44%), Positives = 113/180 (62%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ K  M   I   KK+  ++R+G+ SP+MLD +KVEAYGS VPLNQVA++   EPR+L
Sbjct: 8   LKDAKSGMEKAIENSKKEFSSVRSGKASPNMLDTIKVEAYGSFVPLNQVASIAAPEPRIL 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK     +E+ I ES LGL+P  +G V+R+P+P   E+RR  LVKV H  AE  +
Sbjct: 68  LVTPFDKGQAKVIEKAIRESELGLDPAHQGGVIRVPLPSMNEQRRKELVKVLHKMAEDGR 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VR+ R DG D LKK       SED     E D+QK+ D  I  +D+  + K+ E+M  
Sbjct: 128 IAVRHARTDGRDKLKKL---DGVSEDDKKHTEKDLQKVHDDFIGKLDALVKAKEAELMEV 184


>gi|189502668|ref|YP_001958385.1| hypothetical protein Aasi_1351 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|238692316|sp|B3ETV4|RRF_AMOA5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189498109|gb|ACE06656.1| hypothetical protein Aasi_1351 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 186

 Score =  211 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/187 (39%), Positives = 106/187 (56%), Gaps = 2/187 (1%)

Query: 1   MNQVID-LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M+++   L      M    +  + +   +R GR  P MLD + +  Y +  PLNQVA +T
Sbjct: 1   MDEIQKQLDKSDQLMQKACTHTQIEFSKIRAGRAMPDMLDGISILYYNAMTPLNQVAAIT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R LV+  W+++ +  +E+ I  S LGLNP  +G+V+RI VP  TEERR  LVK A 
Sbjct: 61  TPDARTLVIKPWERKCIQEIEKAIVNSKLGLNPQNDGEVVRIIVPPLTEERRKDLVKQAK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             AEK KIS+RNIR+D  +  K  +K G ASED +   E  +Q +TD  I NID+    K
Sbjct: 121 NEAEKGKISIRNIRKDIKETFKHLQKDG-ASEDTIKRAEEKLQNLTDKHIHNIDNLLTHK 179

Query: 180 KKEIMHF 186
           + EI+  
Sbjct: 180 EAEILEV 186


>gi|32472787|ref|NP_865781.1| ribosome recycling factor [Rhodopirellula baltica SH 1]
 gi|32444024|emb|CAD73466.1| Ribosome recycling factor [Rhodopirellula baltica SH 1]
          Length = 200

 Score =  211 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 57/179 (31%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   +S L+ ++  +RTGR +P ++D +KVE YGS  PL Q+A++   EP+ +
Sbjct: 21  LMDAEERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQI 80

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +  +E+ I   +LGLNP  +G+V+R+ VP  + E R  +V      AE++K
Sbjct: 81  LIRPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAK 140

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RNIRRD     + + K  + +ED     ++ +Q++T     N++   + ++ E+M 
Sbjct: 141 VSIRNIRRDANKAAETAEKDKEMTEDDRDKTKDQVQELTKKAETNVNESAKAREAEVME 199


>gi|189468227|ref|ZP_03017012.1| hypothetical protein BACINT_04623 [Bacteroides intestinalis DSM
           17393]
 gi|189436491|gb|EDV05476.1| hypothetical protein BACINT_04623 [Bacteroides intestinalis DSM
           17393]
          Length = 209

 Score =  211 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 2/187 (1%)

Query: 1   MNQVID-LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  V D L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA V 
Sbjct: 24  MRDVKDILDEAQEKMDMAVMYLEEALAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVN 83

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R + +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   
Sbjct: 84  TPDARSIAIKPWDKSMFRVIEKAIIDSSLGIMPENNGEIIRIGIPPLTEERRRQLAKQCK 143

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E +K+SVRN RRD +D LKKS K G  +ED     E  +QKI D  IK ID     K
Sbjct: 144 GEGETAKVSVRNARRDAIDALKKSVKDG-LAEDAQKGGEEKLQKIHDKYIKQIDDMLIAK 202

Query: 180 KKEIMHF 186
            KEIM  
Sbjct: 203 DKEIMTV 209


>gi|139439763|ref|ZP_01773154.1| Hypothetical protein COLAER_02185 [Collinsella aerofaciens ATCC
           25986]
 gi|133774913|gb|EBA38733.1| Hypothetical protein COLAER_02185 [Collinsella aerofaciens ATCC
           25986]
          Length = 178

 Score =  211 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 65/179 (36%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +NI   M  ++  LK +   +RTGR + ++L  + V+ YG   P+ QVA V   E  ML+
Sbjct: 3   ENITAHMDKSLESLKHNFSKVRTGRANANILSDITVDYYGVPTPVTQVAAVKTPEAHMLL 62

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK ++ ++ + I  S+LG+ P  +G V+R+P P  TEERR  LVK    YAE++K+
Sbjct: 63  IEPWDKALINAIVKAIGASDLGITPNSDGTVVRLPFPAPTEERRRELVKECREYAEQAKV 122

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD  +   K  +  + +ED V   +  +QK TD  +  ++   +EK+ E+M  
Sbjct: 123 SIRNIRRDFNN---KLERDEELTEDDVRREQAKVQKHTDEYVAKVEELLKEKEAEVMEI 178


>gi|42525110|ref|NP_970490.1| hypothetical protein Bd3784 [Bdellovibrio bacteriovorus HD100]
 gi|47116990|sp|P61302|RRF_BDEBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39577321|emb|CAE81144.1| rrf [Bdellovibrio bacteriovorus HD100]
          Length = 186

 Score =  211 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 113/179 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N + +M  T++ L +++  +RTGR   SMLD ++V  YG+  PL+QVA+++  + +  +
Sbjct: 8   KNAQAKMEKTLNSLSEELKKVRTGRAQVSMLDGIRVNYYGTPSPLSQVASISTPDAKSFL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+  ++  +E+ I +S LG+ P+ +G+V+R+ VP+ TEERR  L K     AE++++
Sbjct: 68  IAPWEVAILKDIEQAIIKSELGMAPMNDGKVIRLKVPDLTEERRKDLAKQVKKIAEEARV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VR  RRD  D +KK +K    SED     E DIQK+TD  IK +D   EEK+K I+  
Sbjct: 128 AVRMARRDANDEVKKLQKDKAVSEDEGKKAEADIQKVTDDFIKKVDQVAEEKEKAILTI 186


>gi|254521520|ref|ZP_05133575.1| ribosome recycling factor [Stenotrophomonas sp. SKA14]
 gi|219719111|gb|EED37636.1| ribosome recycling factor [Stenotrophomonas sp. SKA14]
          Length = 184

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 107/180 (59%), Gaps = 3/180 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYG-SHVPLNQVANVTVLEPRML 66
            N + RM  +I  LK  + ++RTGR +P++LD V V AYG +  PLNQVA+++  +   L
Sbjct: 7   NNAQTRMAKSIDALKHTLTSIRTGRATPALLDRVTVNAYGNASTPLNQVASISNADAHSL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK M+  +E+G++       P   G  +RI +P  TEERR  LVK      E +K
Sbjct: 67  LVTPFDKSMIKEIEKGLYNHE--FTPNTLGAAIRINMPPPTEERRKELVKQVQKEGEGAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRNIR+D    + K  K    SED     E+DIQK+TD +IK++D    EK+KE++  
Sbjct: 125 IAVRNIRQDANKEIAKLVKDKAISEDEKKRGEDDIQKLTDGSIKDVDKVVAEKEKELLSV 184


>gi|149369635|ref|ZP_01889487.1| ribosome releasing factor [unidentified eubacterium SCB49]
 gi|149357062|gb|EDM45617.1| ribosome releasing factor [unidentified eubacterium SCB49]
          Length = 192

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 79/188 (42%), Positives = 113/188 (60%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M   I+  + + K+ M +TI  LKK  + +R G+ +PSM+  V V  YGS  PL QVANV
Sbjct: 9   MEDEINFIIDSTKEAMDNTIVHLKKKFVNIRAGKATPSMVGSVMVNYYGSPTPLTQVANV 68

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              +   + ++ W+K ++  +E+GIH +NLG NP+  G+ + I VP  TEERR  L K A
Sbjct: 69  NTPDGMTITIAPWEKGLIPEIEKGIHLANLGFNPMNNGESVIITVPPLTEERRRELAKQA 128

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE SK+ VRN R++  + +K        SED+ A+LE D+QK+TD+ I  ID  F  
Sbjct: 129 KAEAEDSKVGVRNDRKNANNEIKNL----DVSEDLKANLEADVQKMTDNHITLIDELFSV 184

Query: 179 KKKEIMHF 186
           K+KEIM  
Sbjct: 185 KEKEIMTV 192


>gi|15645870|ref|NP_208048.1| ribosome recycling factor [Helicobacter pylori 26695]
 gi|210135415|ref|YP_002301854.1| ribosome recycling factor [Helicobacter pylori P12]
 gi|3024576|sp|P56398|RRF_HELPY RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749931|sp|B6JN96|RRF_HELP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|2314423|gb|AAD08302.1| ribosome releasing factor (frr) [Helicobacter pylori 26695]
 gi|210133383|gb|ACJ08374.1| ribosome releasing factor [Helicobacter pylori P12]
          Length = 185

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTSEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNQVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV 185


>gi|302762955|ref|XP_002964899.1| hypothetical protein SELMODRAFT_83448 [Selaginella moellendorffii]
 gi|302809577|ref|XP_002986481.1| hypothetical protein SELMODRAFT_124362 [Selaginella moellendorffii]
 gi|300145664|gb|EFJ12338.1| hypothetical protein SELMODRAFT_124362 [Selaginella moellendorffii]
 gi|300167132|gb|EFJ33737.1| hypothetical protein SELMODRAFT_83448 [Selaginella moellendorffii]
          Length = 192

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 62/174 (35%), Positives = 111/174 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++  +RM  TI  +K +  T+RTGR SP++LD V+VE YG+ V L  +A ++  +   ++
Sbjct: 18  EDAMERMEKTIETVKSNFNTIRTGRASPALLDRVEVEYYGTLVLLKTIAQISTPDGSTIL 77

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +D+  ++++++ I +S+LGL P  +G V+R+ +P+ T ERR  L+K+     E+ K+
Sbjct: 78  VQPFDRSSLSAIDKAITKSDLGLTPSNDGIVIRLNIPQLTAERRKELLKLVAKLTEEGKV 137

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           ++RN+RRD +   +K  K  K S D V  L  ++Q++TD  +K +D  F++K+K
Sbjct: 138 ALRNVRRDAIKSYEKLEKEKKISTDNVKDLSTEMQRLTDEYVKTVDDLFKQKEK 191


>gi|282880955|ref|ZP_06289646.1| ribosome recycling factor [Prevotella timonensis CRIS 5C-B1]
 gi|281305178|gb|EFA97247.1| ribosome recycling factor [Prevotella timonensis CRIS 5C-B1]
          Length = 186

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 116/180 (64%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++RM    ++L++ +  +R GR + ++LD V V +YGS VPLNQVANV+V + R +
Sbjct: 8   LKEAEERMQMAATYLEESLSRVRAGRANVAILDGVMVNSYGSMVPLNQVANVSVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   EK+K
Sbjct: 68  AIKPWDKKAIKDIEKAIMDSDVGITPENNGEIIRLGIPQPTEERRRDLVKQCNKIGEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I VRN+R +  D LKK+ K G  SED     EN++Q + D  IKN+D   EEK KEIM  
Sbjct: 128 IEVRNVRSEIKDRLKKAVKDG-LSEDAGKDAENELQNVHDKYIKNVDRLLEEKTKEIMTV 186


>gi|109946849|ref|YP_664077.1| ribosome recycling factor [Helicobacter acinonychis str. Sheeba]
 gi|123362775|sp|Q17Z48|RRF_HELAH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|109714070|emb|CAJ99078.1| frr [Helicobacter acinonychis str. Sheeba]
          Length = 185

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L ++  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNREFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERAIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  +QKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKVKKLEKDKEISEDESKKAQEQVQKITDEAIKKIDESVKNKEDAILKV 185


>gi|255559434|ref|XP_002520737.1| ribosome recycling factor, putative [Ricinus communis]
 gi|223540122|gb|EEF41699.1| ribosome recycling factor, putative [Ricinus communis]
          Length = 247

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 61/155 (39%), Positives = 97/155 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ K RM  TI  ++ +  ++RTGR +PSMLD ++VE YG+ V L  +A ++  +   L+
Sbjct: 84  KDAKARMEKTIETVRTNFNSIRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLL 143

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +DK  + S+E+ I  S+LGL P  +G+V+R+ +P+ T ERR  + K+    AE+ K+
Sbjct: 144 VQPYDKSSLKSIEKAIVSSDLGLTPNNDGEVIRLSIPQLTSERRKEMSKMVAKLAEEGKV 203

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
           ++RNIRRD +   +K  K  K SED V  L  D+Q
Sbjct: 204 ALRNIRRDALKAYEKLEKEKKLSEDNVKDLSGDLQ 238


>gi|281425442|ref|ZP_06256355.1| ribosome recycling factor [Prevotella oris F0302]
 gi|281400435|gb|EFB31266.1| ribosome recycling factor [Prevotella oris F0302]
          Length = 186

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM     +L  ++  +R GR + ++LD VKV++YGS VPLNQVA V+  + R +
Sbjct: 8   LSDAQERMEMAAMYLADELTHIRAGRANTAILDGVKVDSYGSKVPLNQVATVSTPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+V+R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIRPWDKKAIKDIEKAIMDSDVGITPENNGEVIRLGIPQPTEERRKELVKQCNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+R +  D LKK+ K G  SED+    END+QK+ D  IK ID    EK+KEIM  
Sbjct: 128 VEVRNVRGEVKDKLKKAIKEG-LSEDLEKDAENDLQKVHDKFIKRIDELLTEKQKEIMTV 186


>gi|317505061|ref|ZP_07963008.1| ribosome recycling factor [Prevotella salivae DSM 15606]
 gi|315663839|gb|EFV03559.1| ribosome recycling factor [Prevotella salivae DSM 15606]
          Length = 186

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM     +L  ++  +R GR + ++LD VKV++YGS VPLNQVAN++  + R +
Sbjct: 8   LSDAQERMEMAAMYLADELTHIRAGRANTAILDGVKVDSYGSKVPLNQVANISTPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S +G+ P   G+V+R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIRPWDKKAIKDIEKAIMDSGVGITPENNGEVIRLGIPQPTEERRKELVKQCNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+R +  D LKK+ K G  SED+    END+QK+ D  IK ID    EK+KEIM  
Sbjct: 128 VEVRNVRGEVKDKLKKAIKEG-LSEDLEKDAENDLQKVHDKFIKRIDDLLNEKQKEIMTV 186


>gi|329961847|ref|ZP_08299861.1| ribosome recycling factor [Bacteroides fluxus YIT 12057]
 gi|328531287|gb|EGF58131.1| ribosome recycling factor [Bacteroides fluxus YIT 12057]
          Length = 186

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 76/187 (40%), Positives = 109/187 (58%), Gaps = 2/187 (1%)

Query: 1   MNQVID-LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  V D L   +++M   + +L++ ++ +R G+    +LD ++V++YGS VP+N VA VT
Sbjct: 1   MKDVKDILDEAQEKMDMAVMYLEEALVHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R + +  WDK M   +E+ I +S LG+ P   G+++RI +P  TEERR  L K   
Sbjct: 61  TPDARSIAIKPWDKSMFRVIEKAIIDSPLGIMPENNGEIIRIGIPPLTEERRKQLAKQCK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E +K+SVRN RRD +D LKKS K G  +ED   S E  +QKI D  IK ID     K
Sbjct: 121 GEGETAKVSVRNARRDAIDALKKSVKDG-LAEDAQKSGEEKLQKIHDKYIKQIDDMLAAK 179

Query: 180 KKEIMHF 186
            KEIM  
Sbjct: 180 DKEIMTV 186


>gi|257068198|ref|YP_003154453.1| ribosome recycling factor [Brachybacterium faecium DSM 4810]
 gi|256559016|gb|ACU84863.1| ribosome recycling factor [Brachybacterium faecium DSM 4810]
          Length = 188

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 55/177 (31%), Positives = 98/177 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + +M  ++   K +   +RTGR + +ML  + VE YG+  PLNQ++++   E R +
Sbjct: 9   LKDAEAKMKKSVEVTKDEFTAIRTGRANAAMLQGITVEYYGAPTPLNQLSSLQFPEARTI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK  ++ +E  + +S+LG+NP   G  LR+ +P  TEERR   VK+A   AE  +
Sbjct: 69  IVTPYDKSAMSGIETALRDSDLGVNPTNNGDNLRVVLPALTEERRKDYVKLARTKAEDGR 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++VR  R +    ++K  K  +  ED     E +++ +T      ID     K+ E+
Sbjct: 129 VAVRGSRGNAKKAIEKLVKDKEIGEDEGTRAEKELEALTKKYNDQIDEALGLKETEL 185


>gi|300778312|ref|ZP_07088170.1| ribosome recycling factor [Chryseobacterium gleum ATCC 35910]
 gi|300503822|gb|EFK34962.1| ribosome recycling factor [Chryseobacterium gleum ATCC 35910]
          Length = 184

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 103/180 (57%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+++K  M   +  L      +R GR S +M+  V VE YG+  P+NQVANV++ +   +
Sbjct: 8   LESVKQDMDAAVKHLDHAFQRIRAGRASTTMVQDVMVEYYGAMTPINQVANVSIPDAMTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD+  + ++E+ I  SNLG  P   G+ + + VP  TEERR  L K A A AE++K
Sbjct: 68  SIQPWDRTAINAIEKAIINSNLGFAPSNNGENIILNVPPLTEERRKELAKQAKAEAEQTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRN R+DG+  LKK       SED++  +E +IQ  TD  +K  D   + K+ EIM  
Sbjct: 128 VTVRNARQDGLKELKKL---DGVSEDVIKGVEEEIQTYTDKYVKLCDEHLKTKEAEIMKV 184


>gi|260591376|ref|ZP_05856834.1| ribosome recycling factor [Prevotella veroralis F0319]
 gi|260536742|gb|EEX19359.1| ribosome recycling factor [Prevotella veroralis F0319]
          Length = 186

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 112/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM     +L  ++  +R GR + ++LD V+V++YGS VPLNQVA+V V + R +
Sbjct: 8   LNDASERMEMAAMYLSDELQRIRAGRANVAILDGVRVDSYGSKVPLNQVASVMVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIKPWDKKAIKDIEKAIMDSDVGITPENNGEMIRLNLPQPTEERRRDLVKQCNKIGERAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +RN+R D  D LKK+ K G  SED     E  +QKI D  IK +D    EK+KEIM  
Sbjct: 128 VEIRNVRSDIKDKLKKAIKDG-LSEDNEKDAELSLQKIHDKFIKQVDELLAEKQKEIMTV 186


>gi|108563625|ref|YP_627941.1| ribosome recycling factor [Helicobacter pylori HPAG1]
 gi|123246899|sp|Q1CS05|RRF_HELPH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|107837398|gb|ABF85267.1| ribosome releasing factor [Helicobacter pylori HPAG1]
          Length = 185

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  ++  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSVQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV 185


>gi|317180982|dbj|BAJ58768.1| ribosome recycling factor [Helicobacter pylori F32]
          Length = 185

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV 185


>gi|190573499|ref|YP_001971344.1| ribosome recycling factor [Stenotrophomonas maltophilia K279a]
 gi|229890169|sp|B2FIA5|RRF_STRMK RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|190011421|emb|CAQ45039.1| putative ribosome recycling factor [Stenotrophomonas maltophilia
           K279a]
          Length = 184

 Score =  210 bits (536), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 107/180 (59%), Gaps = 3/180 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYG-SHVPLNQVANVTVLEPRML 66
            N + RM  +I  LK  + ++RTGR +P++LD V V AYG +  PLNQVA+++  +   L
Sbjct: 7   NNAQTRMAKSIDALKHTLTSIRTGRATPALLDRVTVNAYGNASTPLNQVASISNADAHSL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK M+  +E+G+   N    P   G  +RI +P  TEERR  LVK      E +K
Sbjct: 67  LVTPFDKGMIKEIEKGL--YNAEFTPNTLGTAIRINMPPPTEERRKELVKQVQKEGEGAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIR+D    + K  K    SED     E+DIQK+TD+ IK++D    +K+KE++  
Sbjct: 125 IAIRNIRQDANKEIAKLVKDKAISEDEKKRGEDDIQKLTDTNIKDVDKVVADKEKELLSV 184


>gi|313158407|gb|EFR57806.1| ribosome recycling factor [Alistipes sp. HGB5]
          Length = 185

 Score =  210 bits (536), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 67/186 (36%), Positives = 109/186 (58%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L     RM   I  L+++++ +R G+ SP+ L+ + V+ +GS VP++  A+VTV
Sbjct: 1   MDTKTILNEASGRMQKAIDHLEEELLNVRAGKASPNALNGIMVDYFGSQVPVSGAASVTV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + + +++  WDK M+  +E+ I +SN+GL P   G+ +R+ +P  TEERR  LVK    
Sbjct: 61  PDAKTILIQPWDKNMLRPLEKAIIDSNIGLTPSNNGEQIRLTIPPLTEERRKELVKQIRG 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE ++IS+RN RRD ++  KK++K G   ED     E   QK+ +   K +D   + K+
Sbjct: 121 EAETARISLRNARRDAVEAFKKAQKEG-MPEDESKDGETQSQKLLEKFSKLLDEALQRKE 179

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 180 KEIMTV 185


>gi|254779799|ref|YP_003057905.1| ribosome recycling factor [Helicobacter pylori B38]
 gi|254001711|emb|CAX29942.1| Ribosome recycling factor (Ribosome releasing factor) (RRF)
           [Helicobacter pylori B38]
 gi|317009940|gb|ADU80520.1| ribosome recycling factor [Helicobacter pylori India7]
          Length = 185

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNQVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV 185


>gi|282890409|ref|ZP_06298937.1| ribosome recycling factor [Parachlamydia acanthamoebae str. Hall's
           coccus]
 gi|281499791|gb|EFB42082.1| ribosome recycling factor [Parachlamydia acanthamoebae str. Hall's
           coccus]
          Length = 183

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 61/177 (34%), Positives = 104/177 (58%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  K++M   +  LK D+ ++RTG+ +P MLD + VE YGS + L  +A +   E R L
Sbjct: 4   VKQTKEKMEAALEHLKNDLNSIRTGQANPGMLDGITVEVYGSQMRLRDIATINSPEARQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D     ++ + I  +NLG  PIV+G  +RI +P   E  R  + K+ H   E++K
Sbjct: 64  LITPFDAGTAGAIGKSIERANLGFMPIVDGNAVRIKIPPMDESLRKEMAKLCHKKQEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RN RRD  D ++K + +G+  ED +   E +IQ++TD   K  D    +K+KEI
Sbjct: 124 VAIRNHRRDANDLVRKQKAAGELPEDQMKKQEKEIQELTDKYCKLADEIAAKKEKEI 180


>gi|325270332|ref|ZP_08136937.1| ribosome recycling factor [Prevotella multiformis DSM 16608]
 gi|324987276|gb|EGC19254.1| ribosome recycling factor [Prevotella multiformis DSM 16608]
          Length = 207

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 116/180 (64%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++  +RM     +L  ++  +R GR + ++LD V+V++YGS VPLNQVA V V + R +
Sbjct: 29  LKDAGERMEMAAMYLGDELQRIRAGRANVAILDGVRVDSYGSKVPLNQVATVMVPDARTI 88

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   E++K
Sbjct: 89  AIKPWDRKAIKDIEKAIMDSDVGITPENNGEMIRLNLPQPTEERRRELVKQCNKIGERTK 148

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +RN+R D  D LKK+ K G  SED     END+QKI D  IK +D+  +EK+KEIM  
Sbjct: 149 VEIRNVRSDIKDKLKKAIKDG-LSEDNEKDAENDLQKIHDKYIKQVDALLDEKQKEIMTV 207


>gi|257066151|ref|YP_003152407.1| ribosome recycling factor [Anaerococcus prevotii DSM 20548]
 gi|256798031|gb|ACV28686.1| ribosome recycling factor [Anaerococcus prevotii DSM 20548]
          Length = 186

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  KD M   +    K +  ++ GR + ++LD +    YG+  P+NQ A V++ E R+LV
Sbjct: 8   KQAKDEMTKALDSFDKRIANIKAGRATEAILDGITFSYYGTETPINQAATVSIPEARLLV 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +  +E+ I +SN+G+ P  +G+V+R+P P+ TEERR    K    YAE +KI
Sbjct: 68  IKPWDKTNIGPIEKAILKSNIGITPQNDGEVIRLPFPQLTEERRKEYTKEVDTYAEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RN RR+ MD +KKS KSG  +ED   +LE++IQKITD  I+++++   +K KE+M  
Sbjct: 128 VIRNKRREAMDEVKKSEKSGDITEDDRYTLEDEIQKITDKMIEDVEALASKKNKELMSV 186


>gi|94676465|ref|YP_588960.1| ribosome recycling factor [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|190360234|sp|Q1LSV4|RRF_BAUCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|94219615|gb|ABF13774.1| ribosome recycling factor [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 185

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 118/179 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ + RM   +   K ++  LRTGR +P++LD +KV+ YGS +PL Q+AN+ V + R LV
Sbjct: 7   QDAEVRMEKCLETFKNNISKLRTGRANPNLLDNIKVDYYGSIMPLRQLANIIVEDTRTLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++++D+ ++  VE+ I  S+LGL P + G ++R+ +P  TEERR  L+K+    AE+ KI
Sbjct: 67  ITLFDQSIIKRVEKAIIISDLGLTPDLSGTIIRVQLPSLTEERRRNLIKIVRNEAEQGKI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD  DH+K   K+   S D     +++IQKIT++ I+ +D    EK++E++ F
Sbjct: 127 SVRNIRRDANDHIKILLKNKAISIDEERRSQSEIQKITEAWIRRLDQILSEKERELIDF 185


>gi|126662970|ref|ZP_01733968.1| ribosome recycling factor (ribosome releasing factor)
           [Flavobacteria bacterium BAL38]
 gi|126624628|gb|EAZ95318.1| ribosome recycling factor (ribosome releasing factor)
           [Flavobacteria bacterium BAL38]
          Length = 187

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 79/188 (42%), Positives = 114/188 (60%), Gaps = 3/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M + I+  L + K+ M  +++ L+K+ + +R G+ SP ML  V V+ YGS  PL+QVAN+
Sbjct: 1   MTEEINFILDSAKEAMIGSVAHLEKEFLNIRAGKASPQMLGGVFVDYYGSQTPLSQVANI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R L V+ W+K M+  +E+ I  +NLGLNP+  G  + I +P  TEERR  LVK A
Sbjct: 61  NAADARTLTVTPWEKNMLHPIEKAIMIANLGLNPMNNGDNIIINIPALTEERRRDLVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            + AE +KI +RN R+D    +KK  K G A ED+    E D+QK+TDS IK I+     
Sbjct: 121 KSEAEDAKIGIRNHRKDANSDIKKEEKEGTA-EDICKKAEEDVQKLTDSFIKKIEELLAV 179

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 180 KEAEIMKV 187


>gi|315587147|gb|ADU41528.1| ribosome recycling factor [Helicobacter pylori 35A]
          Length = 185

 Score =  210 bits (535), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD +IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDESIKTIDESVKNKEDAILKV 185


>gi|317013043|gb|ADU83651.1| ribosome recycling factor [Helicobacter pylori Lithuania75]
          Length = 185

 Score =  210 bits (535), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  ++  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   + 
Sbjct: 7   NETKDLMQKSVQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTIQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTSEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV 185


>gi|297380436|gb|ADI35323.1| ribosome recycling factor [Helicobacter pylori v225d]
 gi|308062540|gb|ADO04428.1| ribosome recycling factor [Helicobacter pylori Cuz20]
 gi|308064035|gb|ADO05922.1| ribosome recycling factor [Helicobacter pylori Sat464]
 gi|332674059|gb|AEE70876.1| ribosome recycling factor [Helicobacter pylori 83]
          Length = 185

 Score =  210 bits (535), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEDAILKV 185


>gi|218283542|ref|ZP_03489532.1| hypothetical protein EUBIFOR_02122 [Eubacterium biforme DSM 3989]
 gi|218215810|gb|EEC89348.1| hypothetical protein EUBIFOR_02122 [Eubacterium biforme DSM 3989]
          Length = 181

 Score =  210 bits (535), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 115/186 (61%), Gaps = 5/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+ +  L N +++M   I  L+ ++  +RTGR S  ML+ V+VE YG+  P+NQ+A ++V
Sbjct: 1   MSDI--LLNAEEKMMGAIDNLESNLRQIRTGRASGQMLERVQVEYYGAMTPINQIAQISV 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           +E   LVV  +D+ +V  +   I  +NLGLNP  E  V+RI VP+ TE+RR  L K A  
Sbjct: 59  VEGTQLVVKPYDRSIVKGIAHAIQAANLGLNPQAEADVIRIQVPQLTEDRRKELAKDAQK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E++K+++RN+RRD  D +K   K  +  ED       + QK+TD  IK++DS  E KK
Sbjct: 119 YGEEAKVAIRNVRRDANDAIK---KDKELPEDEKKQTLEESQKLTDKYIKDVDSITETKK 175

Query: 181 KEIMHF 186
           KEI++ 
Sbjct: 176 KEILNV 181


>gi|225166035|ref|ZP_03727781.1| ribosome recycling factor [Opitutaceae bacterium TAV2]
 gi|224799722|gb|EEG18205.1| ribosome recycling factor [Opitutaceae bacterium TAV2]
          Length = 181

 Score =  210 bits (535), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 112/180 (62%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   + RM   +     +   + TG+ +P+M++ V ++AYGS + +   A +   + RM+
Sbjct: 6   LTEAQTRMKKAVDHTLHEFANIHTGKATPAMVEGVMIDAYGSQMRIKDCAAIMTPDARMI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK +V ++ +GI  +NLG NP V+G ++R+P+PE + ERRL  VKVA+  AE+ +
Sbjct: 66  VIQPWDKGLVQAISKGIQIANLGFNPNVDGNLIRVPLPEMSRERRLEFVKVANRLAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+RRD ++++KK++     SED    LE DIQ +TD +I+ ++     K+KE++  
Sbjct: 126 VHVRNLRRDTLENVKKAK----LSEDETKRLEKDIQTLTDKSIEEVNKHLAAKEKELLAV 181


>gi|188528045|ref|YP_001910732.1| ribosome recycling factor [Helicobacter pylori Shi470]
 gi|238691946|sp|B2UV20|RRF_HELPS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|188144285|gb|ACD48702.1| ribosome recycling factor [Helicobacter pylori Shi470]
          Length = 185

 Score =  210 bits (535), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTTLNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEDAILKV 185


>gi|312879901|ref|ZP_07739701.1| ribosome recycling factor [Aminomonas paucivorans DSM 12260]
 gi|310783192|gb|EFQ23590.1| ribosome recycling factor [Aminomonas paucivorans DSM 12260]
          Length = 185

 Score =  210 bits (535), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 120/179 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++++K R   +I  LK  +  +RTGR  P++++ +KV+ +G+  PL Q+A V + E R +
Sbjct: 6   IKDMKHRTEKSIEHLKTTLQGIRTGRAHPALVEEIKVDYFGTLTPLKQMAMVNIPESRQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++ WDK  + ++E+ I  S+LG+NP ++G+ +R+ +PE T ERR+ L K+ + Y+E++K
Sbjct: 66  VIAPWDKTALKAIEKAIQASSLGVNPRIDGESIRLTLPELTRERRVELSKLVNKYSEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RNIRR+ ++ LKK  K G  SED +  L+ ++Q+ TD   + ++    EK KEI++
Sbjct: 126 VAIRNIRREVLEALKKMEKDGTISEDELKKLQKEVQEHTDEATRKVEQATAEKDKEILN 184


>gi|224539083|ref|ZP_03679622.1| hypothetical protein BACCELL_03983 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519301|gb|EEF88406.1| hypothetical protein BACCELL_03983 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 186

 Score =  210 bits (535), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 105/180 (58%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA V   + R +
Sbjct: 8   LDEAQEKMDMAVMYLEEALAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVNTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  VIKPWDKSMFKVIEKAIIDSSLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRD +D LKKS K G  +ED     E  +QKI D  IK ID     K KEIM  
Sbjct: 128 VSVRNARRDAIDGLKKSVKDG-LAEDAQKGGEEKLQKIHDKYIKQIDDMLAAKDKEIMTV 186


>gi|53711978|ref|YP_097970.1| ribosome recycling factor [Bacteroides fragilis YCH46]
 gi|60680182|ref|YP_210326.1| ribosome recycling factor [Bacteroides fragilis NCTC 9343]
 gi|253563986|ref|ZP_04841443.1| ribosome-recycling factor [Bacteroides sp. 3_2_5]
 gi|255007502|ref|ZP_05279628.1| ribosome recycling factor [Bacteroides fragilis 3_1_12]
 gi|313145197|ref|ZP_07807390.1| ribosome recycling factor [Bacteroides fragilis 3_1_12]
 gi|60390242|sp|Q64YJ0|RRF_BACFR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|81316748|sp|Q5LHL2|RRF_BACFN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|52214843|dbj|BAD47436.1| ribosome recycling factor [Bacteroides fragilis YCH46]
 gi|60491616|emb|CAH06368.1| putative ribosome recycling factor [Bacteroides fragilis NCTC 9343]
 gi|251947762|gb|EES88044.1| ribosome-recycling factor [Bacteroides sp. 3_2_5]
 gi|301161707|emb|CBW21247.1| putative ribosome recycling factor [Bacteroides fragilis 638R]
 gi|313133964|gb|EFR51324.1| ribosome recycling factor [Bacteroides fragilis 3_1_12]
          Length = 186

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   IEESQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   A  E +K
Sbjct: 68  TIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKAEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN RRDG+D LKK+ K G  +ED   + E  +QK+ D  I  I+    EK KEIM  
Sbjct: 128 VSIRNARRDGIDALKKAVKDG-LAEDEQKNAEAKLQKVHDKYIAKIEEMLAEKDKEIMTV 186


>gi|269127613|ref|YP_003300983.1| ribosome recycling factor [Thermomonospora curvata DSM 43183]
 gi|268312571|gb|ACY98945.1| ribosome recycling factor [Thermomonospora curvata DSM 43183]
          Length = 185

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 74/180 (41%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   ++  K+D   +RTGRV+P+M   +  + YG+  P+NQ+A+ T+ EPRM+
Sbjct: 6   LFEAEEKMEKAVAVAKEDFAGIRTGRVTPAMFSKITADYYGTPTPINQLASFTLPEPRMV 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V V+DK  + +VE+ I ES+LG+NP  +G V+R+  PE +EERR   VK+A   AE+S+
Sbjct: 66  IVQVFDKSSLPAVEKAIRESDLGVNPTNDGNVIRVVFPELSEERRREYVKIAGNKAEESR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RNIRR   D L K  K G+A ED V   E ++   T   +  ID   E KK E++  
Sbjct: 126 ISIRNIRRRAKDSLDKLAKEGEAGEDEVRRAEKELDDATHKYVAKIDELLEHKKAELLEV 185


>gi|188996515|ref|YP_001930766.1| ribosome recycling factor [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931582|gb|ACD66212.1| ribosome recycling factor [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 184

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 118/180 (65%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM   ++  K++++ +RTGR S  +++ +K++ YG+ +PL Q+A ++  EP  +
Sbjct: 6   LKEAEKRMKGAVNKYKEELLGIRTGRASTGLVENIKIDYYGTELPLKQLATISTPEPAQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  V  +E+ + E+NLG NP  EG V+R+ +P  TEERR  +VK+ H +AE+++
Sbjct: 66  VIQTWDKSAVKLIEKALMEANLGANPQTEGNVIRLNLPPMTEERRKEVVKMIHKFAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  ++++K +K G  SED +      +QK+TD  I+ I+   E K+KEI+  
Sbjct: 126 IAIRNIRRDEKENIEKLKKEG-FSEDDIKKALEKLQKLTDRYIEEINQLTEAKEKEILSI 184


>gi|189463438|ref|ZP_03012223.1| hypothetical protein BACCOP_04157 [Bacteroides coprocola DSM 17136]
 gi|189429867|gb|EDU98851.1| hypothetical protein BACCOP_04157 [Bacteroides coprocola DSM 17136]
          Length = 186

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 102/180 (56%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   I +L+  +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 8   LSGAEEKMDMAIMYLEDALAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRVIEKAIIDSELGIMPENNGEIIRIGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRD +D LKK+ K G   ED   + E  +QK  D  IK ID     K KEIM  
Sbjct: 128 VSVRNARRDAIDALKKAVKDG-MPEDEQKNSEAKLQKSHDKYIKQIDDMLAAKDKEIMTV 186


>gi|270294558|ref|ZP_06200760.1| ribosome recycling factor [Bacteroides sp. D20]
 gi|270276025|gb|EFA21885.1| ribosome recycling factor [Bacteroides sp. D20]
          Length = 200

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 76/187 (40%), Positives = 106/187 (56%), Gaps = 2/187 (1%)

Query: 1   MNQVID-LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  V D L   ++ M   I +L + +  +R G+    +LD ++V++YGS VP+N VA VT
Sbjct: 15  MRDVKDILDEAQESMDMAIMYLDEALAHIRAGKADIRLLDGIRVDSYGSMVPINNVAAVT 74

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R + +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   
Sbjct: 75  TPDARSIAIKPWDKSMFRVIEKAIIDSSLGIMPENNGEIIRIGIPPLTEERRKQLAKQCK 134

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E +K+SVRN RRD +D LKKS K G  +ED     E  +QKI D  IK ID     K
Sbjct: 135 GEGETAKVSVRNARRDAIDALKKSVKDG-LAEDAQKGGEEKLQKIHDKFIKQIDDMLAAK 193

Query: 180 KKEIMHF 186
            KEIM  
Sbjct: 194 DKEIMTV 200


>gi|208435150|ref|YP_002266816.1| ribosome releasing factor [Helicobacter pylori G27]
 gi|226749932|sp|B5Z8Q1|RRF_HELPG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|208433079|gb|ACI27950.1| ribosome releasing factor [Helicobacter pylori G27]
          Length = 185

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALSRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN R+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNTRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV 185


>gi|198274241|ref|ZP_03206773.1| hypothetical protein BACPLE_00381 [Bacteroides plebeius DSM 17135]
 gi|198272916|gb|EDY97185.1| hypothetical protein BACPLE_00381 [Bacteroides plebeius DSM 17135]
          Length = 186

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 103/180 (57%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   +++M   + +L + +  +R G+    +LD ++V++YGS VP+N VA VT  + R +
Sbjct: 8   ISEAEEKMDMAVMYLDESLAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S LG+ P   G+++RI +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRVIEKAIIDSELGIMPENNGEIIRIGIPPLTEERRKQLSKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRD +D LKK+ K G   ED   + E  +QK+ D  IK ID     K KEIM  
Sbjct: 128 VSVRNARRDAIDALKKAVKDG-MPEDEQKNSEAKLQKVHDKYIKQIDDMLAAKDKEIMTV 186


>gi|317182505|dbj|BAJ60289.1| ribosome recycling factor [Helicobacter pylori F57]
          Length = 185

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEYAILKV 185


>gi|317475153|ref|ZP_07934420.1| ribosome recycling factor [Bacteroides eggerthii 1_2_48FAA]
 gi|316908606|gb|EFV30293.1| ribosome recycling factor [Bacteroides eggerthii 1_2_48FAA]
          Length = 186

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 75/187 (40%), Positives = 109/187 (58%), Gaps = 2/187 (1%)

Query: 1   MNQVID-LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  V D L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA VT
Sbjct: 1   MKDVKDILDEAQEKMDMAVMYLEESLAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R + +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   
Sbjct: 61  TPDARSIAIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             +E +K+SVRN RRD +D LKKS K G  +ED     E  +QKI D  IK ID     K
Sbjct: 121 NESETAKVSVRNARRDAIDALKKSVKEG-LAEDAQKGGEEKLQKIHDKYIKQIDDMLAAK 179

Query: 180 KKEIMHF 186
            KEIM  
Sbjct: 180 DKEIMTV 186


>gi|255535426|ref|YP_003095797.1| Ribosome recycling factor [Flavobacteriaceae bacterium 3519-10]
 gi|255341622|gb|ACU07735.1| Ribosome recycling factor [Flavobacteriaceae bacterium 3519-10]
          Length = 184

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/186 (38%), Positives = 102/186 (54%), Gaps = 5/186 (2%)

Query: 3   QVIDL--QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + IDL     K  M   +  L+     +R GR S +M+  V VE YG+  PLNQVANV V
Sbjct: 2   EEIDLIIDMTKQEMDAALKHLEHAFQKIRAGRASTTMVQDVMVEYYGAPTPLNQVANVMV 61

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   + +  WD+  + ++E+ I  SNLG  P+  G+ + + VP  TEERR  L K A  
Sbjct: 62  PDAMTISIQPWDRTAIGAIEKAIINSNLGFAPMNNGENIILNVPPLTEERRRDLAKQAKG 121

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE +K++VRN R+DGM  LKK       SED+V   E  +Q++TD  +K  D   + K+
Sbjct: 122 EAEATKVTVRNARQDGMKELKKL---DGVSEDLVKGGEATVQELTDKYVKLCDDQLKTKE 178

Query: 181 KEIMHF 186
            +IM  
Sbjct: 179 ADIMRV 184


>gi|261838579|gb|ACX98345.1| ribosome releasing factor [Helicobacter pylori 51]
          Length = 185

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN R+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNTRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKQIDESVKNKEDAILKV 185


>gi|304383036|ref|ZP_07365512.1| ribosome recycling factor [Prevotella marshii DSM 16973]
 gi|304335819|gb|EFM02073.1| ribosome recycling factor [Prevotella marshii DSM 16973]
          Length = 186

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM     FL++ +  +R GR + ++LD +KV +YGS VPLNQVANV V + R +
Sbjct: 8   LSESEERMEMAAMFLEEQLARIRAGRANVAILDGIKVNSYGSMVPLNQVANVAVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  L K   A  EK+K
Sbjct: 68  TVRPWDKKAIKDIEKAIMDSDVGITPENNGEIIRLGIPQPTEERRRELSKQCKAIGEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+R D  + LKK+ K G  SED     E+ +QKI D  IK ID     K KEIM  
Sbjct: 128 VEVRNVRADVKEKLKKAIKDG-LSEDNEKDAEDALQKIHDRYIKKIDDLLVAKDKEIMTV 186


>gi|329957499|ref|ZP_08297974.1| ribosome recycling factor [Bacteroides clarus YIT 12056]
 gi|328522376|gb|EGF49485.1| ribosome recycling factor [Bacteroides clarus YIT 12056]
          Length = 186

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 2/187 (1%)

Query: 1   MNQVID-LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  V D L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA VT
Sbjct: 1   MKDVKDILDEAQEKMDMAVMYLEESLAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R + +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   
Sbjct: 61  TPDARSIAIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             +E +K+SVRN RRD +D  KKS K G  +ED     E  +QKI D  IK ID     K
Sbjct: 121 NESETAKVSVRNARRDAIDAFKKSVKEG-LAEDAQKGGEEKLQKIHDKYIKQIDDMLAAK 179

Query: 180 KKEIMHF 186
            KEIM  
Sbjct: 180 DKEIMTV 186


>gi|237757010|ref|ZP_04585465.1| ribosome recycling factor [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237690828|gb|EEP59981.1| ribosome recycling factor [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 184

 Score =  209 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 118/180 (65%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + RM   ++  K++++ +RTGR S  +++ +K++ YG+ +PL Q+A ++  EP  +
Sbjct: 6   LKEAEKRMKGAVNKYKEELLGIRTGRASTGLVENIKIDYYGAELPLKQLATISTPEPAQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  V  +E+ + E+NLG NP  EG V+R+ +P  TEERR  +VK+ H +AE+++
Sbjct: 66  VIQTWDKSAVKLIEKALMEANLGANPQTEGNVIRLNLPPMTEERRKEVVKMIHKFAEEAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  ++++K +K G  SED +      +QK+TD  I+ I+   E K+KEI+  
Sbjct: 126 IAIRNIRRDEKENIEKLKKEG-FSEDDIKKALEKLQKLTDKYIEEINQLTEAKEKEILSI 184


>gi|187935220|ref|YP_001885459.1| ribosome recycling factor [Clostridium botulinum B str. Eklund 17B]
 gi|238691618|sp|B2TJ43|RRF_CLOBB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|187723373|gb|ACD24594.1| ribosome recycling factor [Clostridium botulinum B str. Eklund 17B]
          Length = 185

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 126/180 (70%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++N +++M  T++ LK ++ T++ GR +PSMLD ++++ YGS  PL+Q AN++  EPR+L
Sbjct: 6   IKNAEEKMQKTVTVLKSELGTMKAGRANPSMLDKIQIDYYGSMCPLSQAANISSPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+K+++  +E+ I +S+LGLNP  +G ++R+ +PE TEE R  LVK      E+SK
Sbjct: 66  MITPWEKQLLKEIEKAILKSDLGLNPSNDGSIIRLVIPELTEETRKDLVKKVKKTGEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++R+IRRD  D +K  +K G  SED V   E+D+QK TD+ IK+ID    +K+KEI+  
Sbjct: 126 VAIRSIRRDANDKIKALKKDGDLSEDQVKKGEDDVQKKTDAIIKDIDKIIVDKEKEILAI 185


>gi|308183366|ref|YP_003927493.1| ribosome recycling factor [Helicobacter pylori PeCan4]
 gi|308065551|gb|ADO07443.1| ribosome recycling factor [Helicobacter pylori PeCan4]
          Length = 185

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQK TD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKIKKLEKDKEISEDESKKAQEQIQKTTDEAIKTIDESVKNKEDAILKV 185


>gi|317178450|dbj|BAJ56238.1| ribosome recycling factor [Helicobacter pylori F30]
          Length = 185

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEDAILKV 185


>gi|265765322|ref|ZP_06093597.1| ribosome recycling factor [Bacteroides sp. 2_1_16]
 gi|263254706|gb|EEZ26140.1| ribosome recycling factor [Bacteroides sp. 2_1_16]
          Length = 186

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M   + +L++ +  +R G+ S  +LD ++V++YGS VP++ VA VT  + R +
Sbjct: 8   IEESQEKMDMAVMYLEEALAHIRAGKASTRLLDGIRVDSYGSMVPISNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   A  E +K
Sbjct: 68  TIKPWDKSMFRVIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCKAEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN RRDG+D LKK+ K G  +ED   + E  +QK+ D  I  I+    EK KEIM  
Sbjct: 128 VSIRNARRDGIDALKKAVKDG-LAEDEQKNAEAKLQKVHDKYIAKIEEMLAEKDKEIMTV 186


>gi|217032316|ref|ZP_03437812.1| hypothetical protein HPB128_132g14 [Helicobacter pylori B128]
 gi|298735720|ref|YP_003728245.1| ribosome recycling factor [Helicobacter pylori B8]
 gi|216945982|gb|EEC24596.1| hypothetical protein HPB128_132g14 [Helicobacter pylori B128]
 gi|298354909|emb|CBI65781.1| ribosome recycling factor [Helicobacter pylori B8]
          Length = 185

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  ++  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSVQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN R+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNTRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV 185


>gi|261839975|gb|ACX99740.1| ribosome recycling factor [Helicobacter pylori 52]
          Length = 185

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   DETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEDAILKV 185


>gi|207091619|ref|ZP_03239406.1| ribosome recycling factor [Helicobacter pylori HPKX_438_AG0C1]
          Length = 185

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K M+  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNMLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN R+D  + +KK  K  + SED     +  IQKITD +IK ID   + K+  I+  
Sbjct: 127 AVRNTRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDESIKKIDESVKNKEDAILKV 185


>gi|303236901|ref|ZP_07323480.1| ribosome recycling factor [Prevotella disiens FB035-09AN]
 gi|302483069|gb|EFL46085.1| ribosome recycling factor [Prevotella disiens FB035-09AN]
          Length = 186

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 116/180 (64%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM     +L + +  +R GR + ++LD V+V +YGS VPLNQVA+VTV +PR +
Sbjct: 8   LSEAEERMEMAAMYLDEQLQRIRAGRANVAILDGVRVNSYGSVVPLNQVASVTVPDPRTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK ++   E++K
Sbjct: 68  AIKPWDKKAIKDIEKAIMDSDVGITPDNNGEIIRLSLPQPTEERRRDLVKQSNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+R D  D  KK+ K G  SED+    E ++QKI D  IK ID+   EK+KEIM  
Sbjct: 128 VEVRNVRSDIKDKFKKAIKDG-LSEDLEKDAEEELQKIHDKYIKKIDALLVEKEKEIMTV 186


>gi|217033577|ref|ZP_03439005.1| hypothetical protein HP9810_899g13 [Helicobacter pylori 98-10]
 gi|216943923|gb|EEC23357.1| hypothetical protein HP9810_899g13 [Helicobacter pylori 98-10]
          Length = 185

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  +K ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAVKTIDESVKNKEDAILKV 185


>gi|160891315|ref|ZP_02072318.1| hypothetical protein BACUNI_03764 [Bacteroides uniformis ATCC 8492]
 gi|317481183|ref|ZP_07940258.1| ribosome recycling factor [Bacteroides sp. 4_1_36]
 gi|156859536|gb|EDO52967.1| hypothetical protein BACUNI_03764 [Bacteroides uniformis ATCC 8492]
 gi|316902679|gb|EFV24558.1| ribosome recycling factor [Bacteroides sp. 4_1_36]
          Length = 186

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/187 (40%), Positives = 106/187 (56%), Gaps = 2/187 (1%)

Query: 1   MNQVID-LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  V D L   ++ M   I +L + +  +R G+    +LD ++V++YGS VP+N VA VT
Sbjct: 1   MRDVKDILDEAQESMDMAIMYLDEALAHIRAGKADIRLLDGIRVDSYGSMVPINNVAAVT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R + +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   
Sbjct: 61  TPDARSIAIKPWDKSMFRVIEKAIIDSSLGIMPENNGEIIRIGIPPLTEERRKQLAKQCK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E +K+SVRN RRD +D LKKS K G  +ED     E  +QKI D  IK ID     K
Sbjct: 121 GEGETAKVSVRNARRDAIDALKKSVKDG-LAEDAQKGGEEKLQKIHDKFIKQIDDMLAAK 179

Query: 180 KKEIMHF 186
            KEIM  
Sbjct: 180 DKEIMTV 186


>gi|303273418|ref|XP_003056070.1| ribosomal recycling factor, chloroplast precursor [Micromonas
           pusilla CCMP1545]
 gi|226462154|gb|EEH59446.1| ribosomal recycling factor, chloroplast precursor [Micromonas
           pusilla CCMP1545]
          Length = 245

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 60/176 (34%), Positives = 105/176 (59%), Gaps = 3/176 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+  DRM  ++  ++ ++ T+RTGR + ++LD ++VE YGS  PL  +AN+T  + + ++
Sbjct: 70  QSADDRMEKSVDSIRNNLNTVRTGRANAAILDRIEVEYYGSVTPLKSLANITTPDAQTII 129

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +DK ++  VE+ I  S+L L P  +G  +R+ +P  T ERR  L K+     E  K+
Sbjct: 130 IQPFDKNIIDDVEKAIMSSDLDLMPGNDGNCIRLNIPPLTAERRRDLAKLVSKLGEDGKV 189

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++RN+RRD +  + K       SED + SLEN+++K+T     ++D    +K+ EI
Sbjct: 190 ALRNVRRDTLRSIGKL---KGYSEDEIKSLENNVEKMTLKHTTDVDEVVRKKEDEI 242


>gi|313901163|ref|ZP_07834651.1| ribosome recycling factor [Clostridium sp. HGF2]
 gi|312954121|gb|EFR35801.1| ribosome recycling factor [Clostridium sp. HGF2]
          Length = 180

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 114/180 (63%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++ L++D+ T+RTG    S+LD V+ E YGS  P+NQVA+V V+E R L
Sbjct: 4   LNHAEEKMKKAVAVLEEDLKTIRTGIAHASLLDHVQFEYYGSPTPINQVASVKVVEGRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D+  +  +ER I  S+ GL P  +G+V+R+ VP  TEERR  L K AH   E++K
Sbjct: 64  VIKPYDRGTLKDIERAIQTSDTGLVPQSDGEVIRLNVPALTEERRKELAKSAHKMGEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  D +K   K  + +ED+    +  IQK+TD   K+IDS  + K KEIM  
Sbjct: 124 IAIRNIRRDANDAVK---KDKELTEDLKKDAQEKIQKLTDKIGKSIDSAVDTKAKEIMKV 180


>gi|15612242|ref|NP_223895.1| ribosome recycling factor [Helicobacter pylori J99]
 gi|6831645|sp|Q9ZJX1|RRF_HELPJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|4155787|gb|AAD06763.1| RIBOSOME RECYCLING FACTOR (RIBOSOME RELEASING FACTOR) (RRF)
           [Helicobacter pylori J99]
          Length = 185

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN R+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNTRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV 185


>gi|167765030|ref|ZP_02437151.1| hypothetical protein BACSTE_03424 [Bacteroides stercoris ATCC
           43183]
 gi|167697699|gb|EDS14278.1| hypothetical protein BACSTE_03424 [Bacteroides stercoris ATCC
           43183]
          Length = 186

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 2/187 (1%)

Query: 1   MNQVID-LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  V D L   +++M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA VT
Sbjct: 1   MKDVKDILDEAQEKMDMAVMYLEESLAHIRAGKADVRLLDGIRVDSYGSMVPINNVAAVT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R + +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   
Sbjct: 61  TPDARSIAIKPWDKSMFRIIEKAIIDSDLGIMPENNGEIIRIGIPPLTEERRKQLAKQCK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             +E +K+SVRN RRD +D  KKS K G  +ED     E  +QKI D  IK ID     K
Sbjct: 121 NESETAKVSVRNARRDAIDAFKKSVKEG-LAEDAQKGGEEKLQKIHDKYIKQIDDMLAAK 179

Query: 180 KKEIMHF 186
            KEIM  
Sbjct: 180 DKEIMTV 186


>gi|330998184|ref|ZP_08322010.1| ribosome recycling factor [Paraprevotella xylaniphila YIT 11841]
 gi|329568876|gb|EGG50674.1| ribosome recycling factor [Paraprevotella xylaniphila YIT 11841]
          Length = 186

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 106/180 (58%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L + +  +R G+    +LD ++V++YGS VP+N VA V   + R +
Sbjct: 8   LDEAQEKMDMAVMYLDEALAHIRAGKADIRLLDGIRVDSYGSMVPINNVAAVNTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M  ++E+ I +S LG+ P   G+++RI +P  TEERR  L K   A  E +K
Sbjct: 68  AIKPWDKNMFRAIEKAIIDSELGIMPENNGEIIRIGIPPLTEERRKQLAKQCKAECETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRD +D LKK+ K G  +ED   + E  +QK+ D  IK ID  +  K KEIM  
Sbjct: 128 VSVRNARRDAIDALKKAVKDG-MAEDEQKNSEAKLQKVHDKYIKQIDDLYAAKDKEIMTV 186


>gi|194477329|ref|YP_002049508.1| ribosome releasing factor [Paulinella chromatophora]
 gi|171192336|gb|ACB43298.1| ribosome releasing factor [Paulinella chromatophora]
          Length = 180

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 58/180 (32%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + +++  M  ++   ++ + T+RTGR +PS+LD + V+ YG+   L  +A V   + + +
Sbjct: 1   MNDLETSMNKSVEATQRTLNTIRTGRANPSLLDKITVDYYGAETSLKSMATVFAPDSQTI 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D + +  +E+ I  S+LGL    +G+++RI +P  T++RR  L K+A  YAE+ K
Sbjct: 61  AIQPFDIKSMGLIEKAIAISDLGLTTSNDGKIIRINIPPLTQDRRKDLCKLAAKYAEEGK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RRD +D +KK+ K G  SED     +  +Q +TD +I  I+    +K+ EI+  
Sbjct: 121 VALRNLRRDAIDKIKKNEKDGSLSEDQSRDQQKAVQNLTDISISQIEKNLSQKEIEIIKV 180


>gi|187917999|ref|YP_001883562.1| ribosome recycling factor [Borrelia hermsii DAH]
 gi|238689276|sp|B2RZI6|RRF_BORHD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119860847|gb|AAX16642.1| ribosome recycling factor [Borrelia hermsii DAH]
          Length = 184

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/177 (40%), Positives = 112/177 (63%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  +LRTGR+S ++ D V V+ YG   PL +VAN+++ E R++V+ 
Sbjct: 8   LDEKMDRVLLSLDSEYKSLRTGRISSALFDKVLVDYYGEKTPLTRVANISIPEARLIVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK +++ +E+ I  S+L +NP  +G VLRI VP  T ERR  +VK A   AE+ K++ 
Sbjct: 68  PWDKSLLSKIEQAILSSDLSMNPSSDGSVLRIKVPVLTVERRKEIVKQAKKIAEEYKVAA 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RN+R++  +  KK  K  + +ED +  + +DIQ+ T+S IK ID  F+ K KEIM F
Sbjct: 128 RNVRQELNNKAKKQEKDSQITEDDLRRILDDIQRDTNSYIKKIDEIFDLKTKEIMEF 184


>gi|309775654|ref|ZP_07670653.1| ribosome recycling factor [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916560|gb|EFP62301.1| ribosome recycling factor [Erysipelotrichaceae bacterium 3_1_53]
          Length = 180

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 77/180 (42%), Positives = 111/180 (61%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +++M   ++ L++D+ T+RTG    S+LD V+ E YGS  P+NQVA+V V+E R L
Sbjct: 4   LNHAEEKMKKAVTVLEEDLKTIRTGIAHASLLDHVQFEYYGSPTPINQVASVKVVEGRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D+  +  +ER I  S+ GL P  +G+V+R+ VP  TEERR  L K AH   E +K
Sbjct: 64  VIKPYDRGTLKDIERAIQTSDTGLVPQSDGEVIRLNVPSLTEERRKELAKAAHKMGEDAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD  D +K   K  + +ED+    +  IQK+TD   K ID   E K KEIM  
Sbjct: 124 IAIRNIRRDANDAVK---KDKELTEDLKKDAQEKIQKLTDKIGKTIDQAVENKAKEIMKV 180


>gi|194365040|ref|YP_002027650.1| ribosome recycling factor [Stenotrophomonas maltophilia R551-3]
 gi|238693463|sp|B4SQ19|RRF_STRM5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|194347844|gb|ACF50967.1| ribosome recycling factor [Stenotrophomonas maltophilia R551-3]
          Length = 184

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 106/180 (58%), Gaps = 3/180 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYG-SHVPLNQVANVTVLEPRML 66
            N + RM  +I  LK  + ++RTGR +P++LD V V AYG +  PLNQVA+++  +   L
Sbjct: 7   NNAQTRMAKSIDALKHTLTSIRTGRATPALLDRVTVNAYGNASTPLNQVASISNADAHSL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +DK M+  +E+G+   N    P   G  +RI +P  TEERR  L K      E +K
Sbjct: 67  LVTPFDKSMIKEIEKGL--YNAEFTPNTLGTAIRINMPPPTEERRKELAKQVQKEGEGAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIR+D    + K  K    SED     E+DIQK+TD+ IK++D    +K+KE++  
Sbjct: 125 IAIRNIRQDANKEIAKLDKDKAISEDEKKRGEDDIQKLTDANIKDVDKVVADKEKELLSV 184


>gi|187735811|ref|YP_001877923.1| ribosome recycling factor [Akkermansia muciniphila ATCC BAA-835]
 gi|238691857|sp|B2UKL9|RRF_AKKM8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|187425863|gb|ACD05142.1| ribosome recycling factor [Akkermansia muciniphila ATCC BAA-835]
          Length = 188

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 69/188 (36%), Positives = 110/188 (58%), Gaps = 2/188 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDL--VKVEAYGSHVPLNQVANV 58
           M+    L   ++ M   + F K++   +RTG+ SP +++   V V +YGS + L  +A +
Sbjct: 1   MDAETLLLETEESMLKAVDFAKQEFSGVRTGKASPGLVENLDVHVSSYGSVMKLKGLAVI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +  EPR++++  +D   V  + R I+ES L LNP+VEG+ +R+P+P  TEERR  LVK+ 
Sbjct: 61  STPEPRLILIQPFDPSTVHDIGRAINESKLNLNPLVEGRSIRLPIPALTEERRKDLVKLV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            + AE++++ VR  R+  MD  KK +     +ED    LE  IQK+TD  +K ID     
Sbjct: 121 KSQAEEARVRVRGARKAAMDSAKKLKAENIVTEDGQRDLETQIQKLTDKYVKEIDELVAV 180

Query: 179 KKKEIMHF 186
           K+K+IM  
Sbjct: 181 KEKDIMTI 188


>gi|332291336|ref|YP_004429945.1| ribosome recycling factor [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169422|gb|AEE18677.1| ribosome recycling factor [Krokinobacter diaphorus 4H-3-7-5]
          Length = 185

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 79/188 (42%), Positives = 111/188 (59%), Gaps = 5/188 (2%)

Query: 1   MNQ--VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+     +   K+ M D I  L K ++T+R G+ SP+ML  + V  YGS  PL+QVANV
Sbjct: 1   MNEDLKFIIDTAKEAMDDAIVHLAKRLLTIRAGKASPAMLQGLMVNYYGSPTPLSQVANV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R + V  W+K ++  +E+ I  +NLG NP+  G+ + I VP  TEERR  LVK A
Sbjct: 61  NTPDGRTITVQPWEKSLMQEIEKAIINANLGFNPMNNGENIIINVPPLTEERRKDLVKQA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE SK+ VRN R++  + +KK      AS+D  A+ E DIQK+TD  IK I+    +
Sbjct: 121 RAEAEDSKVGVRNDRKNANNDIKKV---DDASDDEKANAEVDIQKLTDIHIKKIEDVLSK 177

Query: 179 KKKEIMHF 186
           K+ EIM  
Sbjct: 178 KEAEIMTV 185


>gi|308185004|ref|YP_003929137.1| ribosome recycling factor [Helicobacter pylori SJM180]
 gi|308060924|gb|ADO02820.1| ribosome recycling factor [Helicobacter pylori SJM180]
          Length = 185

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV +V  L+   + 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSVMSLDATTIQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T E+R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTSEQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRN R+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNTRQDANNKVKKLEKDKEISEDESKKAQEQIQKITDEAIKKIDESVKNKEDAILKV 185


>gi|289522434|ref|ZP_06439288.1| ribosome recycling factor [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504270|gb|EFD25434.1| ribosome recycling factor [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 188

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 62/169 (36%), Positives = 115/169 (68%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+++++ M   +   K +M  +R GR  P++++ +KV+ YG+  P+ Q+  +++ EPR +
Sbjct: 9   LKDMRESMKKAVEHFKAEMTGIRAGRAHPALVENIKVDYYGAQTPIKQMGTISIPEPRQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S+WDK  + +VE+ I  S LG+ P V+G+ +RI +PE T+ERR+ L ++   YAE+++
Sbjct: 69  LISLWDKTAIKAVEKAIQASQLGVMPQVDGENIRITLPELTKERRVELSRLVKKYAEEAR 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           +++RNIRRD +D LKK  K  + SED +  L+++IQ+IT+  I+ ++  
Sbjct: 129 VAIRNIRRDVLDELKKQEKDSEISEDELRRLQDEIQEITNEYIEMVNKA 177


>gi|323344896|ref|ZP_08085120.1| ribosome recycling factor [Prevotella oralis ATCC 33269]
 gi|323094166|gb|EFZ36743.1| ribosome recycling factor [Prevotella oralis ATCC 33269]
          Length = 186

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM     +L + +  +R GR + ++LD V+V +YGS VPLNQVANV+V + R +
Sbjct: 8   LNDAEERMQMASMYLDESLSRIRAGRANVAILDSVRVSSYGSMVPLNQVANVSVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+GI +S++G+ P   G+++R+ +P+ TEERR  LVK  +   EK K
Sbjct: 68  AIRPWDKKAIKDIEKGIMDSDVGITPENNGEIIRLTIPQPTEERRKELVKQCNKIGEKVK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+R +  + LKK+ K G  SED     E+ +QKI D  IKNID+   EK KEIM  
Sbjct: 128 VEVRNVRSEIKEKLKKAIKEG-LSEDNEKDAEDSLQKIHDKYIKNIDALLAEKTKEIMTV 186


>gi|288803716|ref|ZP_06409145.1| ribosome recycling factor [Prevotella melaninogenica D18]
 gi|302345756|ref|YP_003814109.1| ribosome recycling factor [Prevotella melaninogenica ATCC 25845]
 gi|288333805|gb|EFC72251.1| ribosome recycling factor [Prevotella melaninogenica D18]
 gi|302149258|gb|ADK95520.1| ribosome recycling factor [Prevotella melaninogenica ATCC 25845]
          Length = 186

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 114/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM     +L  ++  +R GR + ++LD V+VE+YGS VPLNQVA+V V + R +
Sbjct: 8   LNDASERMEMATMYLGDELQRIRAGRANVAILDGVRVESYGSKVPLNQVASVMVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   E++K
Sbjct: 68  AIKPWDKKAIKDIEKAIMDSDVGITPENNGELIRLNLPQPTEERRRDLVKQCNKIGERTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +RN+R D  + LKK+ K G  SED     E  +QKI D  IK +D+  E+K+KEIM  
Sbjct: 128 VEIRNVRSDIKEKLKKAIKDG-LSEDNEKDAEESLQKIHDKFIKQVDTLLEDKQKEIMTV 186


>gi|160871855|ref|ZP_02061987.1| ribosome recycling factor [Rickettsiella grylli]
 gi|159120654|gb|EDP45992.1| ribosome recycling factor [Rickettsiella grylli]
          Length = 186

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 67/178 (37%), Positives = 108/178 (60%), Gaps = 1/178 (0%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSH-VPLNQVANVTVLEPRMLVV 68
            +  M   +  LK ++  LRTGR  PS+L+ ++V  YG   VPLN VA++TV + R L+V
Sbjct: 9   TEQGMQKALEALKANLAKLRTGRAHPSLLEQLRVPQYGGKEVPLNHVASITVADARTLLV 68

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + W+K ++  +E+ I +S+LGLNP+  G V+R+P+   TEERR  + K+    AE +++S
Sbjct: 69  TPWEKSLIPLIEKTILQSHLGLNPLTAGNVIRVPLALLTEERRRDMSKLVKKEAEDARVS 128

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RN R+D    LK   K    +ED     +  IQK+TD +I  ++   + K++E+MH 
Sbjct: 129 IRNYRQDANHQLKNLVKKKLITEDEERRAKEMIQKMTDRSIVEVEKIAKVKEEELMHI 186


>gi|317177998|dbj|BAJ55787.1| ribosome recycling factor [Helicobacter pylori F16]
          Length = 185

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
              KD M  +I  L +D  TLR+ +VS ++LD +KV+ YG+   LNQV ++  L+   L 
Sbjct: 7   NETKDLMQKSIQALNRDFSTLRSAKVSVNILDHIKVDYYGTPTALNQVGSMMSLDATTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +S W+K ++  +ER I E+N+G+NP  +G+ +++  P  T ++R  + K A A  EK+K+
Sbjct: 67  ISPWEKNLLKEIERSIQEANIGVNPNNDGETIKLFFPPMTTDQRKLIAKDAKAMGEKAKV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIR+D  + +KK  K  + SED     +  IQKITD  IK ID   + K+  I+  
Sbjct: 127 AVRNIRQDANNKIKKLEKDKEISEDESKKAQEQIQKITDEAIKTIDESVKNKEDAILKV 185


>gi|256371432|ref|YP_003109256.1| ribosome recycling factor [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008016|gb|ACU53583.1| ribosome recycling factor [Acidimicrobium ferrooxidans DSM 10331]
          Length = 190

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 60/181 (33%), Positives = 108/181 (59%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L   +DRM   +   +++  T+RTGR   ++LD + VE YG  VPL Q+A+VT  +P  
Sbjct: 10  ELAAFEDRMAKAVRHTEEEFATVRTGRAQAALLDGIVVEYYGERVPLRQLASVTTPDPHS 69

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L+++ +D+  + ++ER I +S+LG+NP  +G V+RI +   TEERR  LVKV    AE+ 
Sbjct: 70  LLIAPYDRNAMGAMERAIRDSDLGVNPTNDGSVIRIAIAPLTEERRRELVKVVRKRAEEG 129

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++++R +RR    H +  ++ G  + D +A +E  + ++T   +  +D   E K+ +++ 
Sbjct: 130 RVAIRGVRRQAKQHFESLQRQGSLTTDDLADIERSLDRLTARFVGELDRALEVKEHDLLE 189

Query: 186 F 186
            
Sbjct: 190 V 190


>gi|224025759|ref|ZP_03644125.1| hypothetical protein BACCOPRO_02500 [Bacteroides coprophilus DSM
           18228]
 gi|224018995|gb|EEF76993.1| hypothetical protein BACCOPRO_02500 [Bacteroides coprophilus DSM
           18228]
          Length = 186

 Score =  207 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 103/180 (57%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   +++M   I +L + +  +R G+    +LD +KV++YGS VP+N VA VT  + R +
Sbjct: 8   ISAAEEKMDMAIMYLDESLAHIRAGKADVRLLDGIKVDSYGSMVPINNVAAVTTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S LG+ P   G+++R+ +P  TEERR  L K      E +K
Sbjct: 68  AIKPWDKSMFRVIEKAIIDSELGIMPENNGEIIRLGIPPLTEERRKQLAKQCKGEGETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRD +D LKK+ K G   ED   + E  +QK+ D  IK ID     K KEIM  
Sbjct: 128 VSVRNARRDAIDALKKAVKDG-MPEDEQKNSEAKLQKVHDKYIKQIDDMLAAKDKEIMTV 186


>gi|312959395|ref|ZP_07773912.1| Ribosome-recycling factor [Pseudomonas fluorescens WH6]
 gi|311286112|gb|EFQ64676.1| Ribosome-recycling factor [Pseudomonas fluorescens WH6]
          Length = 185

 Score =  207 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 101/179 (56%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+ VANVTV + R L 
Sbjct: 7   KDAQARMQKSLESLSHAFGQIRTGKAHPSILGSVMVPYYGTDTPLSGVANVTVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+A+V++ I  + L LNP   G++L I +P  TEE R    K A + AE +++
Sbjct: 67  VVAFERNMLAAVDKAIQSAGLNLNPTNLGELLLISMPALTEETRKGFTKQARSAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LKK  K  + SED       DI K+T      I    EEK+K++M  
Sbjct: 127 AVRNIRRDALGDLKKLVKDKEISEDEERRAVADIDKLTKDAEAQITKATEEKEKDLMAV 185


>gi|283769070|ref|ZP_06341976.1| ribosome recycling factor [Bulleidia extructa W1219]
 gi|283104427|gb|EFC05804.1| ribosome recycling factor [Bulleidia extructa W1219]
          Length = 182

 Score =  207 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 108/180 (60%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           + +   +M   +  L+ ++ T+RTG  +  ++D V+ + YG+  PLNQ+A ++V E R +
Sbjct: 6   IDSCSMKMDKVMDHLQSELNTVRTGMANAKLMDRVEADYYGTPTPLNQIAGISVSEGRTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   +  +ER  +E+NLG+ P  +G V+R+ VP+ T E R  + K     AE+SK
Sbjct: 66  VIKPYDPSSLKEIERACNEANLGMAPQNDGTVIRLTVPQLTGETRKEMSKKVGQIAEESK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +RNIRRD M+ +K   K  +  EDM   +EN+IQK+TD  +K ID   + K+ E++  
Sbjct: 126 IQIRNIRRDAMNVVK---KDKEMDEDMQKDMENEIQKLTDKYVKKIDEQAKAKEAEVLKV 182


>gi|154250177|ref|YP_001411002.1| ribosome recycling factor [Fervidobacterium nodosum Rt17-B1]
 gi|171769433|sp|A7HN62|RRF_FERNB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|154154113|gb|ABS61345.1| ribosome recycling factor [Fervidobacterium nodosum Rt17-B1]
          Length = 184

 Score =  207 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 115/180 (63%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +++M  ++  + +++  LRTGR +P++L+ +K++ YG   P+ QVA VT  E R L
Sbjct: 6   IKTTEEKMKKSVEKIAEELKHLRTGRATPAVLEEIKIDYYGVPTPVLQVAQVTTEE-RQL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  W++ ++  +E+ I  S+LGL P+ +G V+RI  P  T E+R   VK A    E+ K
Sbjct: 65  VIKPWERNLLNVIEKAILASDLGLTPVNDGTVVRINFPTPTTEQRQKWVKKAKEIVEEGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD +  +K  +K+G+ SED    LE +IQ +TD  +  +D  FE+K+KEIM F
Sbjct: 125 VAVRNIRRDILKDIKDKKKAGEISEDDEKRLEKEIQNLTDKYVAELDKLFEKKEKEIMEF 184


>gi|229588806|ref|YP_002870925.1| ribosome recycling factor [Pseudomonas fluorescens SBW25]
 gi|259494551|sp|C3K5Z8|RRF_PSEFS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|229360672|emb|CAY47530.1| ribosome recycling factor [Pseudomonas fluorescens SBW25]
          Length = 185

 Score =  207 bits (529), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 66/179 (36%), Positives = 100/179 (55%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  ++  L      +RTG+  PS+L  V V  YGS  P++ VAN+TV + R L 
Sbjct: 7   KDAQARMQKSLESLSHAFGQIRTGKAHPSILGSVMVPYYGSDTPISSVANITVKDSRTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+ +V++ I  + L LNP   G++L I +P  TEE R    K A + AE +++
Sbjct: 67  VVAFERNMLGAVDKAIQSAGLNLNPTNLGELLLISMPALTEETRKGFTKQARSAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LKK  K  + SED       DI K+T      I    EEK+K++M  
Sbjct: 127 AVRNIRRDALGDLKKLVKDKEISEDEERRATADIDKLTKDAEAQITKATEEKEKDLMAV 185


>gi|78186236|ref|YP_374279.1| ribosome recycling factor [Chlorobium luteolum DSM 273]
 gi|123583477|sp|Q3B5Z5|RRF_PELLD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78166138|gb|ABB23236.1| ribosome recycling factor [Chlorobium luteolum DSM 273]
          Length = 186

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  + +M   I   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV NV V +   L+
Sbjct: 8   QKSEQKMKKAIEAFQHEIASIRTGKATTALLDRVKVEAYGQTMPLRQVGNVGVSDIHTLL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MVA+ E+ I ++NLGLNP  EGQ +R+ +P  TEERR   VK+   + E SK+
Sbjct: 68  VQVWDKSMVAATEKAIRDANLGLNPAAEGQSIRVSIPPLTEERRKEFVKLTRKFGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN RRD +  ++K  K    SED     + D   +     K ++    +K+KEIM  
Sbjct: 128 SLRNHRRDMIQEIEKLEKEKAISEDDRNRGKKDADDLLHRFEKQVNELIAQKEKEIMEV 186


>gi|203284046|ref|YP_002221786.1| ribosome releasing factor [Borrelia duttonii Ly]
 gi|203287586|ref|YP_002222601.1| ribosome releasing factor [Borrelia recurrentis A1]
 gi|226749923|sp|B5RLJ5|RRF_BORDL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226749924|sp|B5RQU6|RRF_BORRA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|201083489|gb|ACH93080.1| ribosome releasing factor [Borrelia duttonii Ly]
 gi|201084806|gb|ACH94380.1| ribosome releasing factor [Borrelia recurrentis A1]
          Length = 184

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 72/177 (40%), Positives = 110/177 (62%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++MG  +  L+ +  +LRTGRV+ ++ D V V+ YG   PL +VAN++V E R++V+ 
Sbjct: 8   LDEKMGRVVLSLESEYKSLRTGRVNSALFDKVFVDYYGEKTPLTRVANISVPEARLIVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WD+ +++ +E+ I  S+L +NP  +G VLRI VP  T ERR  +VK A   AE  KI+ 
Sbjct: 68  PWDRSLLSKIEQAILNSDLSMNPSSDGSVLRIKVPVLTIERRKEIVKQAKKIAEDHKIAT 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIR +  +  KK  K  + +ED +  + +DIQ+ T+  IK ID  F+ K KEIM  
Sbjct: 128 RNIRHELNNKAKKQEKDSQITEDDLRRILDDIQRDTNFYIKKIDGIFDLKAKEIMEV 184


>gi|313204948|ref|YP_004043605.1| ribosome recycling factor [Paludibacter propionicigenes WB4]
 gi|312444264|gb|ADQ80620.1| ribosome recycling factor [Paludibacter propionicigenes WB4]
          Length = 186

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 109/180 (60%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +D M  T+ FL + +  +R G+ +P +LD V+VE YG  VP++ VA VT  + + +
Sbjct: 8   LKQAEDSMEATLLFLDESLAHIRAGKANPRILDGVRVEYYGQIVPISGVATVTTPDAKTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K ++  +E+ +  S++G+ P+  G+ +R+ +P  TE+RR  L K + A  E +K
Sbjct: 68  TIQPWEKALIPIIEKALLNSDIGITPMNNGETIRLGIPPLTEDRRRQLAKQSKAECEDAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ISVRN RRD ++HLKK  K G   EDM    E  +QKI D  IK I+  +  K+KEIM  
Sbjct: 128 ISVRNARRDAIEHLKKMIKEG-LPEDMEKDAEVSVQKIHDKYIKRIEDQYLAKEKEIMTV 186


>gi|39932075|sp|Q7UTH0|RRF_RHOBA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
          Length = 186

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 57/179 (31%), Positives = 106/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   +S L+ ++  +RTGR +P ++D +KVE YGS  PL Q+A++   EP+ +
Sbjct: 7   LMDAEERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D   +  +E+ I   +LGLNP  +G+V+R+ VP  + E R  +V      AE++K
Sbjct: 67  LIRPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+RNIRRD     + + K  + +ED     ++ +Q++T     N++   + ++ E+M 
Sbjct: 127 VSIRNIRRDANKAAETAEKDKEMTEDDRDKTKDQVQELTKKAETNVNESAKAREAEVME 185


>gi|332880823|ref|ZP_08448494.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332681206|gb|EGJ54132.1| ribosome recycling factor [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 186

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   + +L + +  +R G+    +LD ++V++YGS VP+N VA V   + R +
Sbjct: 8   LDEAQEKMDMAVMYLDEALAHIRAGKADIRLLDGIRVDSYGSMVPINNVAAVNTPDARSI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M   +E+ I +S LG+ P   G+++RI +P  TEERR  L K   A  E +K
Sbjct: 68  AIKPWDKNMFRVIEKAIIDSELGIMPENNGEIIRIGIPPLTEERRKQLAKQCKAECETAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +SVRN RRD +D LKK+ K G  +ED   + E  +QK+ D  IK ID  +  K KEIM  
Sbjct: 128 VSVRNARRDAIDALKKAVKDG-MAEDEQKNSEAKLQKVHDKYIKQIDDLYAAKDKEIMTV 186


>gi|313683630|ref|YP_004061368.1| ribosome recycling factor [Sulfuricurvum kujiense DSM 16994]
 gi|313156490|gb|ADR35168.1| ribosome recycling factor [Sulfuricurvum kujiense DSM 16994]
          Length = 185

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 100/177 (56%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            +++M  +   +  +  TLRTGRV+  +LD V+VE YGS VPL+Q A+V   +   + +S
Sbjct: 9   CEEKMQGSCDHMIHNFRTLRTGRVTTKILDNVRVENYGSMVPLDQAASVLATDATTITIS 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK M++ +E+ I ++++G+NP   G  +++  P  T E+R    K A   AE +K+ V
Sbjct: 69  PWDKSMLSVIEKAIQKADIGVNPNNNGTDIKLFFPPMTVEQRQETAKKAKGMAEDAKVGV 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RN R+   D +K   K    + D     ++ +QKITD  I  I+   + K+++I+  
Sbjct: 129 RNDRKKANDKIKVLEKDKLITADESKGAQDKVQKITDKYISKIEDLLKAKEQDILTV 185


>gi|288924743|ref|ZP_06418680.1| ribosome recycling factor [Prevotella buccae D17]
 gi|315607757|ref|ZP_07882750.1| ribosome recycling factor [Prevotella buccae ATCC 33574]
 gi|288338530|gb|EFC76879.1| ribosome recycling factor [Prevotella buccae D17]
 gi|315250226|gb|EFU30222.1| ribosome recycling factor [Prevotella buccae ATCC 33574]
          Length = 186

 Score =  207 bits (528), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 113/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM     +L + +  +R GR + ++LD +KVE+YG  VPLNQVAN++  +PR +
Sbjct: 8   LNEAQERMEMAAMYLDEQLARIRAGRANVAILDGIKVESYGMKVPLNQVANISTPDPRTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +  AEK+K
Sbjct: 68  AIKPWDRKAIRDIEKAIMDSDVGITPENNGEIIRLGIPQPTEERRKELVKQCNKIAEKTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I VRN+R +  +  KK+ K G  SED+    E+++QKI D  IK +D     K KEIM  
Sbjct: 128 IEVRNVRGELKEKFKKAIKDG-LSEDLEKDAEDELQKIHDKFIKKLDDLIAAKTKEIMTV 186


>gi|119952923|ref|YP_945132.1| ribosome recycling factor [Borrelia turicatae 91E135]
 gi|254809494|sp|A1QYS0|RRF_BORT9 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119861694|gb|AAX17462.1| ribosome recycling factor [Borrelia turicatae 91E135]
          Length = 184

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 71/177 (40%), Positives = 111/177 (62%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L+ +  +LRTGR++ S+ D V V+ YG   PL +VANV++ E R++V+ 
Sbjct: 8   LDEKMSKVLLSLESEYKSLRTGRINSSLFDKVLVDYYGEKTPLTRVANVSIPEARLIVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK +++ +E+ I  S+L +NP  +G VLRI VP  T ERR  +VK A   AE+ K++ 
Sbjct: 68  PWDKSLLSKIEQAILSSDLSMNPSSDGAVLRIKVPVLTVERRKEIVKQAKKIAEEYKVAA 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RN+R++     KK  K  + +ED +  + +DIQ+ T+S IK ID  F+ K KEIM  
Sbjct: 128 RNVRQELNSKAKKQEKDSQITEDDLRRILDDIQRDTNSYIKKIDEIFDLKTKEIMEV 184


>gi|227500094|ref|ZP_03930165.1| ribosome recycling factor [Anaerococcus tetradius ATCC 35098]
 gi|227217809|gb|EEI83106.1| ribosome recycling factor [Anaerococcus tetradius ATCC 35098]
          Length = 186

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 70/179 (39%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +   D M   +   +K + T++ GR + ++LD +    YG+  P+NQ A V++ E R+LV
Sbjct: 8   KQATDEMNKAVESFEKRISTIKAGRATEAILDGITFSYYGTETPINQAATVSIPEARLLV 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WDK  +  +E+ I +SN+G+ P  +G+++R+P P+ TEERR    K    YAE SKI
Sbjct: 68  IKPWDKSNIGPIEKAILKSNVGITPQNDGEIIRLPFPQLTEERRKQYTKEVDTYAEDSKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RN RR+ M+ +KKS KSG  +ED   +LE++IQKITD  I+ ++    +K KE+M  
Sbjct: 128 IIRNKRREAMEEVKKSEKSGDITEDDRYTLEDEIQKITDKRIEELEKIAAKKNKELMSV 186


>gi|298373170|ref|ZP_06983160.1| ribosome recycling factor [Bacteroidetes oral taxon 274 str. F0058]
 gi|298276074|gb|EFI17625.1| ribosome recycling factor [Bacteroidetes oral taxon 274 str. F0058]
          Length = 188

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 107/180 (59%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +      M  T+SFL   +  +R G+ +  +LD +KV+ YG+  PL+ VA +T  + + +
Sbjct: 10  INTAAADMEATVSFLDDALAHIRAGKANVKILDGIKVDYYGTLTPLSSVATITTPDAKTI 69

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K ++  +E+ I  S++G+ P   G+V+R+ +P  TEERR  LVK A +  E++K
Sbjct: 70  SIQPWEKNLIPVIEKAILASDVGITPANNGEVVRLSIPPLTEERRKQLVKQAGSAVEEAK 129

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RN RR+ ++ LKK  K+G   ED+    E ++QK  D  IK ++  F  K+KEIM  
Sbjct: 130 ISIRNARREAIERLKKEIKNG-MPEDVEKDAEAEVQKQHDKHIKRLEELFAAKEKEIMTI 188


>gi|83816107|ref|YP_444188.1| ribosome recycling factor [Salinibacter ruber DSM 13855]
 gi|294505846|ref|YP_003569904.1| Ribosome recycling factor [Salinibacter ruber M8]
 gi|123529892|sp|Q2S6J3|RRF_SALRD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|83757501|gb|ABC45614.1| ribosome recycling factor [Salinibacter ruber DSM 13855]
 gi|294342174|emb|CBH22952.1| Ribosome recycling factor [Salinibacter ruber M8]
          Length = 189

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 121/180 (67%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    + M +++S+++ ++ T+R GR SP+ML+ V VE YGS  PL QVA+V+  +P ++
Sbjct: 10  LDEADEEMEESVSYMRSELRTIRAGRASPAMLENVTVEYYGSQTPLEQVASVSAPQPDLI 69

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VV  +D+  + ++ERGI +++LGLNP  +G+ +RIP+P  +EERR  LV+ +   AE++K
Sbjct: 70  VVQPFDRNAIENIERGIMKADLGLNPNNDGEKIRIPIPPLSEERRKELVETSRERAEETK 129

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           IS+RNIRRD  + ++   ++   SED++   E D+Q ITD+  + ++   E+K ++IM  
Sbjct: 130 ISIRNIRRDAKNEIQNVVEAENFSEDVLYGAEEDLQDITDAHTETVEGLLEQKTEQIMDV 189


>gi|294672862|ref|YP_003573478.1| ribosome recycling factor [Prevotella ruminicola 23]
 gi|294472820|gb|ADE82209.1| ribosome recycling factor [Prevotella ruminicola 23]
          Length = 186

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 116/180 (64%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   ++RM     +L++++  +R GR + ++LD V+VE YGS VPLNQVANV+V +PR +
Sbjct: 8   LNKSEERMEMAAMYLEEELNRIRAGRANVAILDAVRVEVYGSKVPLNQVANVSVPDPRTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ + ++E+ I +S++G+ P   G+++R+ +P+ TEERR  L K  +  AEK+K
Sbjct: 68  AIKPWDRKEIRNIEKAIMDSDVGITPENNGEIIRLNIPQPTEERRRDLTKQCNKIAEKAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+R D  D LKK+ K G  SED+    E ++QK+ D  IK ID     K KEIM  
Sbjct: 128 VEVRNVRGDIKDKLKKAIKDG-LSEDLEKDAEAELQKLHDKFIKKIDELITAKNKEIMTV 186


>gi|261885413|ref|ZP_06009452.1| ribosome recycling factor [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 185

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 61/172 (35%), Positives = 100/172 (58%)

Query: 15  GDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKE 74
              +   K+D  TLRTG+V+ +++D + V+ YGS   LNQVA V   +   + +S W+K 
Sbjct: 14  DKALEVXKRDXTTLRTGKVNINIVDHINVDYYGSPTALNQVATVLATDASTISISPWEKT 73

Query: 75  MVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRR 134
           M+ ++   I  +N+G+NP  +G  +++  P  T E R    K A +  EK+K+++RNIR+
Sbjct: 74  MLKAISSAIQAANIGVNPNNDGDSVKLFFPPMTTEDRQKNAKEARSMGEKAKVAIRNIRK 133

Query: 135 DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           D  D +KK  K    SED +    +++QKITDS I  ID   ++K+ E++  
Sbjct: 134 DANDDIKKIEKDKSVSEDEIKKGYDEVQKITDSYISKIDQLVKDKEAELLKV 185


>gi|327541582|gb|EGF28113.1| ribosome recycling factor [Rhodopirellula baltica WH47]
          Length = 179

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 56/177 (31%), Positives = 105/177 (59%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           + ++RM   +S L+ ++  +RTGR +P ++D +KVE YGS  PL Q+A++   EP+ +++
Sbjct: 2   DAEERMDKAVSVLQNNLSGIRTGRANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQILI 61

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   +  +E+ I   +LGLNP  +G+V+R+ VP  + E R  +V      AE++K+S
Sbjct: 62  RPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAKVS 121

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD     + + K  + +ED     ++ +Q++T     N++   + ++ E+M 
Sbjct: 122 IRNIRRDANKAAETAEKDKEMTEDDRDKTKDQVQELTKKAETNVNESAKAREAEVME 178


>gi|78778261|ref|YP_394576.1| ribosome recycling factor [Sulfurimonas denitrificans DSM 1251]
 gi|123549529|sp|Q30NU0|RRF_SULDN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78498801|gb|ABB45341.1| ribosome recycling factor [Sulfurimonas denitrificans DSM 1251]
          Length = 185

 Score =  207 bits (527), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 59/186 (31%), Positives = 111/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ +    + +M  +++ + +D  TLRTG+V+ S+LD VK++ YG+   L+QV ++ V
Sbjct: 2   LNELFN--ECETKMKSSVNHMLRDFKTLRTGKVTTSVLDNVKIDYYGTLTALDQVGSILV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   ++++ W+K ++  ++  I ++N+G  P  +G  +++  P  T E+R   VK    
Sbjct: 60  ADATTIIINPWEKNLLNIIDSAISKANIGATPNNDGSQIKLFFPAMTVEQRQESVKQMKG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K++VRN R++  D +KKS K  + + D   S +++IQKITD  I  IDS  + K+
Sbjct: 120 MGEHAKVAVRNDRKNANDKIKKSEKDKEITADESKSAQDNIQKITDKYISEIDSILKTKE 179

Query: 181 KEIMHF 186
            EI+  
Sbjct: 180 AEILKV 185


>gi|262198484|ref|YP_003269693.1| ribosome recycling factor [Haliangium ochraceum DSM 14365]
 gi|262081831|gb|ACY17800.1| ribosome recycling factor [Haliangium ochraceum DSM 14365]
          Length = 185

 Score =  207 bits (527), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + K  M   I   ++++  +RTGR + S+LD VKV+ YGS  PL+QVA++ V E R++
Sbjct: 6   LSDTKSGMEKAIEAFERELAKVRTGRANLSLLDGVKVDYYGSPTPLSQVASLNVAEARLM 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V  WDK M+  +++ I  ++LG+NPI + +++R+P+P  T+ERR  L K     AE ++
Sbjct: 66  TVKPWDKNMIPLIDKAIRAADLGINPISDAELIRLPIPALTKERRNDLAKQTKKMAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VR  RRDG D L+ + K  + SED     +  IQ++TD  +  ID     K+++I+  
Sbjct: 126 IAVRAARRDGNDMLRAAEKEKEVSEDESKQGQKQIQELTDEYVAKIDKLAAAKEQDILTI 185


>gi|260912507|ref|ZP_05919042.1| ribosome recycling factor [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260633386|gb|EEX51541.1| ribosome recycling factor [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 186

 Score =  206 bits (526), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 75/180 (41%), Positives = 113/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ +DRM     +L++ +  +R GR + ++LD V+VE+YG  VPLNQVANV+  + R +
Sbjct: 8   LQDAQDRMEMAAMYLEEQLSRVRAGRANVAILDGVRVESYGMTVPLNQVANVSAPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK+ +  +E+ I +S++G+ P   G+V+R+ +P+ TEERR  L K  +   EK+K
Sbjct: 68  AIKPFDKKAIRDIEKAIMDSDVGITPENNGEVIRLGIPQPTEERRRELAKQCNKIGEKTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I VRN+R +  D LKK+ K G  SED     E+ +QK+ D  IK ID   E K KEIM  
Sbjct: 128 IEVRNVRAEIKDKLKKAIKDG-LSEDNEKDAEDKLQKLHDKFIKKIDELLEAKNKEIMTV 186


>gi|319901066|ref|YP_004160794.1| ribosome recycling factor [Bacteroides helcogenes P 36-108]
 gi|319416097|gb|ADV43208.1| ribosome recycling factor [Bacteroides helcogenes P 36-108]
          Length = 186

 Score =  206 bits (526), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 2/187 (1%)

Query: 1   MNQVID-LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  V D L   K+ M   + +L++ +  +R G+    +LD ++V++YGS VP+N VA VT
Sbjct: 1   MKDVKDILDEAKESMDMAVMYLEEALAHIRAGKADIRLLDGIRVDSYGSMVPINNVAAVT 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             + R + +  WDK M   +E+ I +S+LG+ P   G+++RI +P  TEERR  L K   
Sbjct: 61  TPDARSITIKPWDKGMFRIIEKAIIDSSLGIMPENNGEIIRIGIPPLTEERRKQLAKQCK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E +K+SVRN RRD +D LKK+ K G  +ED     E  +QKI D  IK I+     K
Sbjct: 121 GEGETAKVSVRNARRDAIDGLKKAVKDG-LAEDAQKGGEEKLQKIHDKYIKQIEDMLAAK 179

Query: 180 KKEIMHF 186
            KEIM  
Sbjct: 180 DKEIMTV 186


>gi|255536967|ref|XP_002509550.1| ribosome recycling factor, putative [Ricinus communis]
 gi|223549449|gb|EEF50937.1| ribosome recycling factor, putative [Ricinus communis]
          Length = 262

 Score =  206 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/171 (37%), Positives = 101/171 (59%), Gaps = 2/171 (1%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   I  L +++  LRTGR S  MLD + VE  G  +PLN++A V V++P+ L V+ +D
Sbjct: 91  QMEAAIVSLSRELTKLRTGRASAGMLDHIIVETDGVKMPLNRLAVVAVMDPKTLSVNPYD 150

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             MV+++E+ I  S LGLNP V+G+ L   +P  T+E   A+ KV     E+ K SVR  
Sbjct: 151 PNMVSALEKAIVSSPLGLNPRVDGERLIASIPPLTKEHMQAMCKVVGKSCEEVKQSVRRA 210

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R+  +D +KK+      S+D V  LE ++ ++T   +K+ +   + K+KEI
Sbjct: 211 RQKALDTIKKA--GSNLSKDDVKRLEKEVDELTKKFVKSAEDICKAKEKEI 259


>gi|258647586|ref|ZP_05735055.1| ribosome recycling factor [Prevotella tannerae ATCC 51259]
 gi|260852386|gb|EEX72255.1| ribosome recycling factor [Prevotella tannerae ATCC 51259]
          Length = 186

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + +M  ++  L++ +  +R GR +  +LD +++ +YGS VPLN VA +T  + R +
Sbjct: 8   LADCEKKMDASVMHLEETLAQIRAGRANVHILDAIRINSYGSMVPLNNVAAITTPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK M A +E+ I +S +G+ P   G+V+R+ +P  TEERR  L K  +   E++K
Sbjct: 68  AIKPWDKSMFAPIEKAIIDSEVGIMPENNGEVIRLAIPALTEERRKQLAKQCNKEGEEAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN RR+G D LKK+ K G  SED     E D+QKI D  +K +D+   EK KEIM  
Sbjct: 128 MAIRNARREGNDKLKKALKDG-LSEDSEKDAEADLQKIHDRKVKQVDTLLAEKNKEIMTV 186


>gi|283778745|ref|YP_003369500.1| ribosome recycling factor [Pirellula staleyi DSM 6068]
 gi|283437198|gb|ADB15640.1| ribosome recycling factor [Pirellula staleyi DSM 6068]
          Length = 186

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 59/178 (33%), Positives = 100/178 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L ++++RM   IS LK  +  +RTGR +P ++D ++VE YGS  P+  +A+V   EP+ +
Sbjct: 7   LFDVEERMEKAISVLKGQLAGIRTGRANPGLVDSLRVEVYGSPTPMKSLASVGAPEPQQI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D   +  +E+ I  S LG  P  +G+V+R+ VP  T E R  LV       E++K
Sbjct: 67  VIRPYDASTIKDIEKAIIASGLGFAPQNDGRVIRLNVPPLTTETRRKLVARIKELTEEAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +S+RN+RRDG    ++  K    SED    ++ D+Q++T           + ++ E+M
Sbjct: 127 VSIRNVRRDGNKAAEQEEKDKLLSEDECKKVKEDVQELTKKYENTAGEMAKHREAEVM 184


>gi|307298261|ref|ZP_07578065.1| ribosome recycling factor [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916347|gb|EFN46730.1| ribosome recycling factor [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 184

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ ++RM  ++  + ++   +RTGR SP++L+ VKV+ YG   P+NQ+A +T  E R L
Sbjct: 5   LKDAENRMKKSVEKIVEEYAQMRTGRPSPALLESVKVDYYGVPTPINQIATITTTEDRSL 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WD+ +++ VE+ I  S L L PI +G  +++  P  T E+R   VK+A   AEK K
Sbjct: 65  VIKPWDRSVLSQVEKAIFASKLDLTPINDGVNIKLNFPVPTTEQREKWVKIARDNAEKGK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRRD +   ++  K+ + +ED +   E +IQ++T+  I+ +D  FE+K KEIM F
Sbjct: 125 IAIRNIRRDVIKEARELEKASEMTEDDLKKFEEEIQELTNRYIEEMDKAFEKKSKEIMDF 184


>gi|255644392|gb|ACU22701.1| unknown [Glycine max]
          Length = 261

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 61/176 (34%), Positives = 96/176 (54%), Gaps = 2/176 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            N   +M   ++ L  ++  LRTGR SP MLD + VE  G  +PLN++A V+VL+P+ L 
Sbjct: 85  ANAVSQMEAAMAALSTELSKLRTGRASPGMLDHIIVETSGLKMPLNRLAVVSVLDPKTLS 144

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +D E +  +E  I  S LGLNP  +G+ L   +P  T+E   A+ K+     E ++ 
Sbjct: 145 VNPYDPETLKQLENAIVSSPLGLNPKSDGERLIAVIPPLTKEHMQAMTKLVAKSCEDARQ 204

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           S+R  R+  MD +KK        +D +  LE ++  +T   IK+     + K+KEI
Sbjct: 205 SIRRARQQAMDAIKKLY--SSLPKDDIKRLEKEVDDLTKKFIKSAKDICKAKEKEI 258


>gi|91761973|ref|ZP_01263938.1| Ribosome recycling factor [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717775|gb|EAS84425.1| Ribosome recycling factor [Candidatus Pelagibacter ubique HTCC1002]
          Length = 183

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 80/183 (43%), Positives = 113/183 (61%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           + + +    +M  TI   +K++ +LRTGR + SMLDLVKV+ YG  +PLNQV+++T  + 
Sbjct: 1   MFNEKTYSQKMDKTIEVFQKELTSLRTGRANASMLDLVKVDVYGQAMPLNQVSSITTPDA 60

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R + + VWD   V  V+  I +S LGLNP ++GQ++R+PVP+  EERR  + K+  +  E
Sbjct: 61  RTINIQVWDLNNVPLVDTAIKKSELGLNPQIDGQLIRLPVPDLNEERRTEIKKLIKSMGE 120

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K KIS+RNIRR+  D LK   K    SED     E  +Q  TD  IK ID+  E K+KEI
Sbjct: 121 KCKISIRNIRREANDDLKNLVKEKIISEDEEKINEKLVQSFTDEHIKIIDTKVEAKEKEI 180

Query: 184 MHF 186
           M  
Sbjct: 181 MTI 183


>gi|294056380|ref|YP_003550038.1| ribosome recycling factor [Coraliomargarita akajimensis DSM 45221]
 gi|293615713|gb|ADE55868.1| ribosome recycling factor [Coraliomargarita akajimensis DSM 45221]
          Length = 185

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 75/185 (40%), Positives = 111/185 (60%), Gaps = 3/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N++  + ++   M   +        +L TG+ SP+MLD VKV+AYGS V L +VA VT  
Sbjct: 4   NEI--MSSVTADMKKAVEHTLGQFGSLHTGKASPAMLDSVKVDAYGSTVTLKEVAAVTTP 61

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           + R +VV  WDK ++  VE+GI ++NLG NP+V+G +LR+PVPE T ERR  L K A   
Sbjct: 62  DARTIVVQPWDKSVIREVEKGIIDANLGFNPLVDGGILRVPVPELTGERRAELAKQAGGM 121

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           AE  ++ +R++RRDG+D LK ++  G  SED V   E +IQ   D  I  I+    +K+ 
Sbjct: 122 AEDGRVRIRSVRRDGLDLLKSAKDDG-LSEDDVKRYEKEIQTEHDKYIAEINDQLSKKEA 180

Query: 182 EIMHF 186
           ++   
Sbjct: 181 DLKKV 185


>gi|182415960|ref|YP_001821026.1| ribosome recycling factor [Opitutus terrae PB90-1]
 gi|177843174|gb|ACB77426.1| ribosome recycling factor [Opitutus terrae PB90-1]
          Length = 181

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 109/180 (60%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + +M   +     +   + TG+ +P+M++ V +EAYGS + L   A ++  + R++
Sbjct: 6   LVDAQAKMKKAVDHTLHEFSAIHTGKATPAMVEGVMLEAYGSQMRLKDCAAISTPDARLI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD  +V ++ +GI E+NLG NPI + +V+R+P+PE + ERR   VK AH  AE+ +
Sbjct: 66  QIQPWDASLVKAIVKGIQEANLGFNPIPDSKVVRVPLPEMSRERRQEFVKNAHRLAEEGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+RRD ++ LKK++      ED    LE DIQ  TD++IK I+     K+K+++  
Sbjct: 126 VHVRNVRRDVLEGLKKAK----LPEDESKRLEKDIQTATDASIKAINDALAHKEKDLLTV 181


>gi|288818005|ref|YP_003432352.1| ribosome recycling factor [Hydrogenobacter thermophilus TK-6]
 gi|288787404|dbj|BAI69151.1| ribosome recycling factor [Hydrogenobacter thermophilus TK-6]
 gi|308751605|gb|ADO45088.1| ribosome recycling factor [Hydrogenobacter thermophilus TK-6]
          Length = 181

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 113/186 (60%), Gaps = 6/186 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  +   ++ ++ M   ++  K ++  LRTGR S ++++ +KVE YGS VP+ Q+ +++V
Sbjct: 2   MEDIF--KSAEEDMKKAVNHFKNEIGGLRTGRASTALVEELKVEYYGSKVPIKQLGSISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E   +V+ +WD   V +VE+ I E  LGLNP  +G  LRI +P  TEERR  LV++ H 
Sbjct: 60  PEANQIVLQLWDSNAVPNVEKVIMEE-LGLNPQRQGNTLRIILPPLTEERRKELVRLLHK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE++++++RNIRRD  + +++       SED +    + +QK+TD  I  I+   E K+
Sbjct: 119 MAEEARVAIRNIRRDAKEMIEELE---GVSEDEIKRALDRLQKLTDRYIDQINHLVETKE 175

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 176 KEIMEL 181


>gi|159901963|gb|ABX10694.1| ribosome recycling factor [uncultured planctomycete 8FN]
          Length = 186

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/179 (32%), Positives = 100/179 (55%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM   +  LK  +  +RTGR +P ++D ++V+ YGS  P+ Q+A V   EP  +
Sbjct: 7   LLDTEERMTKALDVLKNALSGIRTGRANPGLVDSIRVDVYGSPTPIKQIATVGAPEPTQI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +D  ++  +E+ I   +LG NP  +G+V+RI VP  + + R  +V      +E +K
Sbjct: 67  VIRPYDASIIKEIEKAIVAGDLGYNPQSDGRVIRINVPALSTDVRKKMVSRIKELSEDAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ISVRN+RRD       + K    SED    +++++Q +T      I +  + K+KE+M 
Sbjct: 127 ISVRNVRRDSNKAADTAEKDKSISEDERDDIKDEVQTLTKQHEDEISAMAKAKEKEVME 185


>gi|194334661|ref|YP_002016521.1| ribosome recycling factor [Prosthecochloris aestuarii DSM 271]
 gi|238693307|sp|B4S4H8|RRF_PROA2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|194312479|gb|ACF46874.1| ribosome recycling factor [Prosthecochloris aestuarii DSM 271]
          Length = 186

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 109/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   + +M  +I   + ++ ++RTG+ + ++LD VKV+AYG  +PL QV NV V +   L
Sbjct: 7   ISKGEAKMKKSIESFQHEIASVRTGKATTALLDRVKVDAYGQQMPLKQVGNVGVQDAHTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V VWDK MVA+ E+ I ++NLGLNP  EGQ +R+ +P  TEERR   VK+   Y+E SK
Sbjct: 67  MVQVWDKSMVAATEKAIRDANLGLNPAAEGQSIRVSIPPLTEERRKEYVKLTRKYSEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN+RR+ +  L K  K  + SED  +  + D   +     K I     +K+KEIM  
Sbjct: 127 VALRNLRREILHALDKLEKDKQISEDEKSRGKKDADDLVHKYEKRILDIVGQKEKEIMEV 186


>gi|254508643|ref|ZP_05120758.1| ribosome recycling factor [Vibrio parahaemolyticus 16]
 gi|219548400|gb|EED25410.1| ribosome recycling factor [Vibrio parahaemolyticus 16]
          Length = 151

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/151 (43%), Positives = 95/151 (62%)

Query: 36  SMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVE 95
           S+L  + VE YG+  PLNQVANV   + R L ++V+DKE+   VE+ I  S+LGLNP+  
Sbjct: 1   SLLAGISVEYYGAPTPLNQVANVVAEDARTLAITVFDKELTQKVEKAIMMSDLGLNPMSA 60

Query: 96  GQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
           G ++R+P+P  TEERR  LVK+    AE  ++++RNIRRD    LK   K  + SED   
Sbjct: 61  GTIIRVPLPPLTEERRKDLVKIVRGEAEGGRVAIRNIRRDANGELKALLKDKEISEDEDR 120

Query: 156 SLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
             + +IQK+TD+ +K +D     K+KE+M  
Sbjct: 121 KGQEEIQKLTDAAVKQVDEVLAAKEKELMEV 151


>gi|295098990|emb|CBK88079.1| ribosome recycling factor [Eubacterium cylindroides T2-87]
          Length = 181

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/181 (41%), Positives = 116/181 (64%), Gaps = 3/181 (1%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           +L   ++RM   I  L+ ++ T+RTGR S  +L+ V+V+ YGS +P+NQ++++ V+E   
Sbjct: 4   NLIKAEERMLKAIENLESNLKTIRTGRASSQILERVQVDYYGSMMPINQLSSIQVVEGTQ 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           LVV  +D+ ++ SV   I  +NLGLNP VE  V+RI VP+ T+ERR  L K A  Y E++
Sbjct: 64  LVVKPYDRSIIKSVGHAIQAANLGLNPQVEADVIRILVPQLTQERREQLAKDAQKYGEEA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           K+++RNIRRD  D  K   K+ + +ED   +   D QK+TD  IK ++    EKKKEI++
Sbjct: 124 KVAIRNIRRDANDATK---KNKELTEDDRKAELEDSQKLTDDYIKQVEQIVNEKKKEILN 180

Query: 186 F 186
            
Sbjct: 181 V 181


>gi|251771482|gb|EES52059.1| ribosome recycling factor [Leptospirillum ferrodiazotrophum]
          Length = 184

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/179 (35%), Positives = 118/179 (65%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL+    +M   +   +K++ TLRTGR S ++++ ++++ YG+ V L++VA + +++ RM
Sbjct: 4   DLKGYGVKMDQAVEHFRKEISTLRTGRPSLALVEHIRLDYYGNQVSLDKVAALNIVDNRM 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           + ++ W+ ++++ +E+ I  +NLG+ P  +G+ +R+ VP  TEERR  LVK+    AE++
Sbjct: 64  ITITPWETKLISDIEKAIMGANLGMTPQNDGKCVRLVVPPMTEERRKELVKILKKMAEEA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           K+S+RNIRRD  + LKK  K G  +ED V  L+ D+QK+ D     ++   ++K++EI+
Sbjct: 124 KVSLRNIRRDANEDLKKKSKDGLITEDRVKRLQEDVQKMVDGASSKVEEHAKKKEQEIL 182


>gi|71083606|ref|YP_266325.1| ribosome recycling factor [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062719|gb|AAZ21722.1| Ribosome recycling factor [Candidatus Pelagibacter ubique HTCC1062]
          Length = 183

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 80/183 (43%), Positives = 114/183 (62%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           + + ++   +M  TI   +K++ +LRTGR + SMLDLVKV+ YG  +PLNQV+++T  + 
Sbjct: 1   MFNEKSYSQKMDKTIEVFQKELTSLRTGRANSSMLDLVKVDVYGQAMPLNQVSSITTPDA 60

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R + + VWD   V  V+  I +S LGLNP ++GQ++R+PVP+  EERR  + K+  +  E
Sbjct: 61  RTINIQVWDLNNVPLVDTAIKKSELGLNPQIDGQLIRLPVPDLNEERRTEIKKLIKSMGE 120

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K KIS+RNIRR+  D LK   K    SED     E  +Q  TD  IK ID+  E K+KEI
Sbjct: 121 KCKISIRNIRREANDDLKNLVKEKIISEDEEKINEKLVQSFTDEHIKIIDTKVEVKEKEI 180

Query: 184 MHF 186
           M  
Sbjct: 181 MTI 183


>gi|110596934|ref|ZP_01385224.1| ribosome recycling factor [Chlorobium ferrooxidans DSM 13031]
 gi|110341621|gb|EAT60081.1| ribosome recycling factor [Chlorobium ferrooxidans DSM 13031]
          Length = 186

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  + +M  TI   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV NV VL+   L+
Sbjct: 8   QKTEQKMKKTIEAFQHEIASIRTGKATTALLDRVKVEAYGQQMPLKQVGNVGVLDVHTLM 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV++ E+ I ++NLGLNP  +GQ +R+ +P  TEERR   VK+   + E SKI
Sbjct: 68  VQVWDKSMVSATEKAIRDANLGLNPSADGQNIRVSIPPLTEERRKEFVKLTRKFGEDSKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD +  ++K  K    SED     + +  ++   + K +      K+KEIM  
Sbjct: 128 SLRNLRRDMIHEIEKLEKDKAISEDDKNRGKKEADELLHKSEKQLTEIMSAKEKEIMEV 186


>gi|124516676|gb|EAY58184.1| ribosome recycling factor [Leptospirillum rubarum]
          Length = 184

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 125/179 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL+  + ++   + F KK++ TLRTGR S S+L+ VKV  YG+   +++VA++ +++ R+
Sbjct: 4   DLKEPQKKLESAVEFFKKEIQTLRTGRPSLSLLENVKVSYYGNPSSVDKVASLNIMDNRI 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+S WD +M+  +E+ I  +N+GL P  +G+V+RI VP  TEERR  +VK+    AE++
Sbjct: 64  IVISPWDMKMIPEIEKAILAANIGLTPQNDGKVIRIAVPPMTEERRKQMVKLLKKMAEEA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KI++RNIRRDG D LKK +  G   ED +  L++++QK+TD T++ ID   ++K++EIM
Sbjct: 124 KIAIRNIRRDGNDELKKKKSDGLIQEDRLKKLQDELQKMTDQTVQKIDDLTQKKEQEIM 182


>gi|70728561|ref|YP_258310.1| ribosome recycling factor [Pseudomonas fluorescens Pf-5]
 gi|85543002|sp|Q4KHH3|RRF_PSEF5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|68342860|gb|AAY90466.1| ribosome recycling factor [Pseudomonas fluorescens Pf-5]
          Length = 185

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 63/179 (35%), Positives = 99/179 (55%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  L      +RTG+  PS+L  V V  YG+  PL+ VANVTV + + L 
Sbjct: 7   KDAQERMKKSLESLAHAFGQIRTGKAHPSILGSVMVPYYGTDTPLSGVANVTVKDSQTLQ 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ M+ ++++ I  + L LNP   G++L I +   TEE R    K A A AE +++
Sbjct: 67  VVPFERNMLGAIDKAIGSAGLNLNPTNLGELLLIKMAPLTEETRKGFTKQARAAAEDARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +VRNIRRD +  LKK  K  + SED       +I K+       I    EEK+K++M  
Sbjct: 127 AVRNIRRDALGELKKLTKDKEISEDEERRGSAEIDKLIKDFEAQIAKATEEKEKDLMAV 185


>gi|281420570|ref|ZP_06251569.1| ribosome recycling factor [Prevotella copri DSM 18205]
 gi|281405343|gb|EFB36023.1| ribosome recycling factor [Prevotella copri DSM 18205]
          Length = 186

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 116/180 (64%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +  +RM     +L +++  +R GR + ++LD V+V +YGS VPLNQVA VT  + R +
Sbjct: 8   LNSAAERMEMAAMYLAEELSHVRAGRANVAILDGVRVNSYGSMVPLNQVATVTTPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S +G+ P   G+++R+ +P+ T ERR  LVK  +  AE++K
Sbjct: 68  AIRPWDKKAIKDIEKAIMDSGVGITPENNGEIVRLGIPQPTGERRKELVKQCNKIAERAK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I VRN+R++  + LKK+ K G  SED+    END+QK+ D  IK +++  +EK+KEIM  
Sbjct: 128 IEVRNVRQEIKEKLKKAIKDG-LSEDLEKDAENDLQKLHDKYIKQLENLMDEKEKEIMTV 186


>gi|288928495|ref|ZP_06422342.1| ribosome recycling factor [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288331329|gb|EFC69913.1| ribosome recycling factor [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 186

 Score =  204 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 76/180 (42%), Positives = 112/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ +DRM     +L++ +  +R GR + ++LD V+VE+YG  VPLNQVANV+  + R +
Sbjct: 8   LQDAQDRMEMAAMYLEEQLSRVRAGRANVAILDGVRVESYGMTVPLNQVANVSAPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +DK+ +  +E+ I +S++G+ P   G+V+R+ +P+ TEERR  L K  +   EKSK
Sbjct: 68  AIKPFDKKAIRDIEKAIMDSDVGITPENNGEVIRLGIPQPTEERRRELTKQCNKIGEKSK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I VRN+R +  D LKK+ K G  SED     E  +QK+ D  IK ID   E K KEIM  
Sbjct: 128 IEVRNVRAEIKDKLKKAIKDG-LSEDNEKDAEEKLQKLHDKFIKKIDELLEAKNKEIMTV 186


>gi|268680896|ref|YP_003305327.1| ribosome recycling factor [Sulfurospirillum deleyianum DSM 6946]
 gi|268618927|gb|ACZ13292.1| ribosome recycling factor [Sulfurospirillum deleyianum DSM 6946]
          Length = 186

 Score =  204 bits (520), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 62/179 (34%), Positives = 112/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            + K+ M   I+ LK+D  T+R+G+VS S+LD + V+ YG+   LNQVA +   +   + 
Sbjct: 8   ADQKEHMEKCIAALKRDFTTIRSGKVSISILDNIHVDYYGTPTALNQVATILATDATTIT 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ W+K+M+  +E+ I ++N+G+NP  +G+ +++  P  T E+R    K A A  +K+KI
Sbjct: 68  ITPWEKKMLREIEKAIMQANIGVNPNNDGESVKLFFPPMTTEQRKESAKQAKAMGDKAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+R+D  D +KK  K    +ED     ++++QKITD+T+  +D   +EK+ E++  
Sbjct: 128 AIRNVRKDANDQVKKLEKDKLITEDQSKKGQDEVQKITDATVTKVDDLVKEKEAEVLKI 186


>gi|254457533|ref|ZP_05070961.1| ribosome recycling factor [Campylobacterales bacterium GD 1]
 gi|207086325|gb|EDZ63609.1| ribosome recycling factor [Campylobacterales bacterium GD 1]
          Length = 185

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 58/186 (31%), Positives = 110/186 (59%), Gaps = 2/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++ D    + +M  +I  +++D  TLRTG+++ S+LD V+++ YG+   L+QV ++  
Sbjct: 2   LNEIYD--ACEKKMKSSIEHMQRDFKTLRTGKITTSVLDNVRIDYYGTMTSLDQVGSIIA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   +VV+ W+K ++ ++E  I ++N+G NP  +G  +++  P  T E+R   VK    
Sbjct: 60  TDATTIVVNPWEKNLLPAIESAISKANVGANPNNDGDQIKLFFPAMTVEQRKESVKQMKG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E +K+S+RN R++  D +KK  K  + + D   S +++IQKITD    N +   ++K+
Sbjct: 120 MGENAKVSLRNDRKNANDQIKKLEKDKEITADESKSAQDNIQKITDKFSANTEQILKDKE 179

Query: 181 KEIMHF 186
            EI+  
Sbjct: 180 AEILKV 185


>gi|194337415|ref|YP_002019209.1| ribosome recycling factor [Pelodictyon phaeoclathratiforme BU-1]
 gi|238693401|sp|B4SER6|RRF_PELPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|194309892|gb|ACF44592.1| ribosome recycling factor [Pelodictyon phaeoclathratiforme BU-1]
          Length = 186

 Score =  204 bits (519), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 111/179 (62%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I+ RM  TI   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV N++VL+   L+
Sbjct: 8   QKIEPRMKKTIEAFQHEIASIRTGKATTALLDRVKVEAYGQQMPLKQVGNISVLDVHTLI 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V +WDK MV++ ER I ++NLGLNP  +GQ +R+ +P  TEERR   VK+   + E SK+
Sbjct: 68  VQIWDKSMVSATERAIRDANLGLNPAADGQNIRVSIPPLTEERRKEFVKLTKKFGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD +  ++K  KS   SED     + D  ++     K +      K+KEIM  
Sbjct: 128 SLRNLRRDMIQEIEKLEKSKAISEDDKNKGKKDADEMLHKFEKQLTELIVHKEKEIMEV 186


>gi|260899614|ref|ZP_05908009.1| ribosome recycling factor [Vibrio parahaemolyticus AQ4037]
 gi|308110171|gb|EFO47711.1| ribosome recycling factor [Vibrio parahaemolyticus AQ4037]
          Length = 156

 Score =  203 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 65/150 (43%), Positives = 95/150 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK ++  +RTGR  PS+L  + VE YG+  PLNQVANV   + R L 
Sbjct: 7   KDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAATPLNQVANVVAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    AE  ++
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASL 157
           +VRNIRRD  + LK   K  + SED     
Sbjct: 127 AVRNIRRDANNDLKALLKDKEISEDEDRKA 156


>gi|145219223|ref|YP_001129932.1| ribosome recycling factor [Prosthecochloris vibrioformis DSM 265]
 gi|189044065|sp|A4SD71|RRF_PROVI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|145205387|gb|ABP36430.1| ribosome recycling factor [Chlorobium phaeovibrioides DSM 265]
          Length = 186

 Score =  203 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +Q  + ++  +I   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV N+ V +   L
Sbjct: 7   IQKNEAKLKKSIEAFQHEIASIRTGKATTALLDRVKVEAYGQLMPLKQVGNIGVADVHTL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V VWDK MV   E+ I ++NLGLNP+ EGQ +R+ +P  TEERR   VK+   + E SK
Sbjct: 67  MVQVWDKGMVGPAEKAIRDANLGLNPVAEGQSIRVSIPPLTEERRKEFVKLTRKFGEDSK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +S+RN+RRD +  ++K  K     ED     + D  ++     K I+     K+KEIM  
Sbjct: 127 VSLRNLRRDMIQEIEKLEKEKTIGEDEKNRGKKDADELLHKYEKQINELISHKEKEIMEV 186


>gi|327404464|ref|YP_004345302.1| ribosome recycling factor [Fluviicola taffensis DSM 16823]
 gi|327319972|gb|AEA44464.1| ribosome recycling factor [Fluviicola taffensis DSM 16823]
          Length = 187

 Score =  203 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 74/188 (39%), Positives = 112/188 (59%), Gaps = 3/188 (1%)

Query: 1   MNQVIDL--QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M + ++L    +K     +I  L+ +++ +R G+ +PSML  V V+ YGS  P++QV NV
Sbjct: 1   MTEELELIYDELKSSNAKSIDHLENELVKVRAGKATPSMLSGVLVDYYGSPTPIHQVGNV 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
             ++ R L V  ++K M+  + +GI  +NLGLNP   G+ L I +P  TEERR  LVK A
Sbjct: 61  NSMDARTLTVQAFEKNMLNEIAKGIMNANLGLNPQNNGEQLIIQIPLLTEERRRDLVKKA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE +K+ +RN R+D +D +K  +  G  SEDM    E +IQ +T+  IK ID   + 
Sbjct: 121 RAEAEHAKVGIRNNRKDAIDMVKSLKADG-LSEDMTKDAETEIQNLTNGFIKKIDELVDL 179

Query: 179 KKKEIMHF 186
           K+K+IM  
Sbjct: 180 KEKDIMTI 187


>gi|206603564|gb|EDZ40044.1| Ribosome recycling factor [Leptospirillum sp. Group II '5-way CG']
          Length = 184

 Score =  203 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 75/179 (41%), Positives = 124/179 (69%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           DL+  + ++   + F KK++ TLRTGR S S+L+ VK+  YG+   +++VA++ +++ R+
Sbjct: 4   DLKEPQKKLESAVEFFKKEIQTLRTGRPSLSLLENVKISYYGNPSSVDKVASLNIMDNRI 63

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+S WD +M+  +E+ I  +N+GL P  +G+V+RI VP  TEERR  +VK+    AE +
Sbjct: 64  IVISPWDMKMIPEIEKAIMAANIGLTPQNDGKVIRIAVPPMTEERRKQMVKLLKKMAEDA 123

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           KI++RNIRRDG D LKK +  G   ED +  L++++QKITD T++ +D   ++K++EIM
Sbjct: 124 KIAIRNIRRDGNDELKKKKSDGLIQEDRLKKLQDELQKITDQTVQKVDDLTQKKEQEIM 182


>gi|148272566|ref|YP_001222127.1| ribosome recycling factor [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|190360237|sp|A5CQS7|RRF_CLAM3 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|147830496|emb|CAN01431.1| frrA [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 185

 Score =  203 bits (518), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 61/181 (33%), Positives = 105/181 (58%), Gaps = 3/181 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRMG  +  +K+D  ++RTGR +P++   V VE YGS  PL Q+A++   E R L
Sbjct: 7   LADARDRMGKAVEAVKEDFGSVRTGRANPALFQKVMVEYYGSPTPLGQLASMNNPEARTL 66

Query: 67  VVSVWDKEMVASVERGIHE-SNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+ +DK  +  +E+ +    NL      +G+++R+ +PE TE+RR   VK+    AE+ 
Sbjct: 67  IVTPYDKTALKEIEKALVNVPNLSATVGNDGEMVRLTLPELTEDRRKEFVKIVRGKAEEG 126

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++SVRNIRR   D L   +  G+  +D VA  E +++ +T +    +D   + K+ E++ 
Sbjct: 127 RVSVRNIRRRSKDELDALK--GEVGDDEVARGEKELESLTKTHTDQVDDALKRKETELLE 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|119357866|ref|YP_912510.1| ribosome recycling factor [Chlorobium phaeobacteroides DSM 266]
 gi|166230777|sp|A1BI59|RRF_CHLPD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|119355215|gb|ABL66086.1| ribosome recycling factor [Chlorobium phaeobacteroides DSM 266]
          Length = 186

 Score =  203 bits (517), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  + +M  TI   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV NV V++   L+
Sbjct: 8   QRTEPKMKKTIEAFQHEIASIRTGKATTALLDRVKVEAYGQQMPLKQVGNVGVMDVHTLM 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV++ ER I ++NLGLNP  +GQ +R+ +P  TEERR   VK+   + E SK+
Sbjct: 68  VQVWDKSMVSATERAIRDANLGLNPAADGQSIRVSIPPLTEERRKEFVKLTKKFGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD +  ++K  K    SED     + +  ++     K ++     K+KEIM  
Sbjct: 128 SLRNLRRDMIHEIEKLEKEKAISEDDKNKGKKEADEMLHKFEKQLNDLIVLKEKEIMEV 186


>gi|307566353|ref|ZP_07628792.1| ribosome recycling factor [Prevotella amnii CRIS 21A-A]
 gi|307344930|gb|EFN90328.1| ribosome recycling factor [Prevotella amnii CRIS 21A-A]
          Length = 186

 Score =  203 bits (517), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 68/180 (37%), Positives = 113/180 (62%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K+RM   + +L +++  +R GR + ++LD V+V +YG  V LNQVA V V + R +
Sbjct: 8   LKEAKERMNMAVMYLDEELQRIRAGRANVAILDSVRVSSYGQMVSLNQVATVMVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   EK+K
Sbjct: 68  AIKPWDRKAIKDIEKAIMDSDVGITPENNGEMIRLNLPQPTEERRRELVKQCNKIGEKTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +RN+R D  + LKK+ K G  SED+    E+D+QK+ D  IK ++     K+KE+M  
Sbjct: 128 IQIRNVRTDIKEILKKAIKEG-LSEDLEKDAESDLQKVHDKYIKQVEDLLAAKEKEVMTV 186


>gi|189500982|ref|YP_001960452.1| ribosome recycling factor [Chlorobium phaeobacteroides BS1]
 gi|238692272|sp|B3EMY2|RRF_CHLPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189496423|gb|ACE04971.1| ribosome recycling factor [Chlorobium phaeobacteroides BS1]
          Length = 186

 Score =  203 bits (517), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 68/179 (37%), Positives = 106/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q  + +M  ++   + ++  +RTG+ + ++LD VKV+AYG  +PL Q+ NV V +   L+
Sbjct: 8   QKAEAKMKKSVESFQHEIAAIRTGKATTALLDHVKVDAYGQTMPLKQIGNVGVQDAHTLM 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MVA+ E+ I ++NLGLNP+ EGQ +R+ +P   EERR   VK+   Y E +KI
Sbjct: 68  VQVWDKSMVAATEKAIRDANLGLNPVAEGQSIRVSIPPLNEERRKEYVKLTKKYGEDAKI 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++RN+RR+ +    K  K  +  ED  A+ + D   +     K I     +K+KEIM  
Sbjct: 128 ALRNLRREMLHGADKLEKDKEIGEDAKANCKKDADNLVHKYEKQISDMIVQKEKEIMEV 186


>gi|300854491|ref|YP_003779475.1| putative ribosome recycling factor [Clostridium ljungdahlii DSM
           13528]
 gi|300434606|gb|ADK14373.1| predicted ribosome recycling factor [Clostridium ljungdahlii DSM
           13528]
          Length = 185

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 114/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L     +MG TI  LK ++ +++ GR S ++LD ++ E YGS  P+NQ+ N+++ EPR+L
Sbjct: 6   LNKADGKMGKTIDALKSELASMKAGRASAALLDRIEAEYYGSMTPINQLGNISIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK  + ++E+ I +S+LG+NP  +G+V+R+ +PE TEE R  +VK      E SK
Sbjct: 66  CIQPWDKTALKAIEKAILKSDLGINPSNDGEVIRLVIPELTEETRKDIVKNVKKAGEDSK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR IRR+  D++K  +K    SED +   E D+QK TD  IK ID   ++K+ EIM  
Sbjct: 126 VAVRAIRRECNDNIKALKKENDISEDEIKKAEADVQKKTDDFIKKIDEIIKKKENEIMSL 185


>gi|300728352|ref|ZP_07061716.1| ribosome recycling factor [Prevotella bryantii B14]
 gi|299774388|gb|EFI71016.1| ribosome recycling factor [Prevotella bryantii B14]
          Length = 186

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 116/180 (64%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + +M    +FL +++  +R GR + ++LD V+VE+YG  VPLNQVANV V + R +
Sbjct: 8   LKDAESKMQKASNFLAEELARVRAGRANVAILDGVRVESYGQMVPLNQVANVQVSDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +  +E+GI +S +G+ P   G+++ + +P+ TEERR  LVK  +   E++K
Sbjct: 68  TIRPWDRKQIRDIEKGIIDSEVGVTPENNGEMVILRLPQPTEERRKELVKQCNKIGEQTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +RNIR D  D LKK+ K G  SED+    E D+QK  D  IK++D+   +K+KEIM  
Sbjct: 128 VQIRNIRADIKDKLKKAVKDG-LSEDLEKDAETDLQKTHDKFIKDVDAILADKQKEIMTV 186


>gi|189345927|ref|YP_001942456.1| ribosome recycling factor [Chlorobium limicola DSM 245]
 gi|238692183|sp|B3EFU4|RRF_CHLL2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189340074|gb|ACD89477.1| ribosome recycling factor [Chlorobium limicola DSM 245]
          Length = 186

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/179 (39%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I+ +M  TI   + ++ ++RTG+ + ++LD VKVEAYG  +PL QV N+ V++   L+
Sbjct: 8   QKIEPKMKKTIEAFQHEIASIRTGKATTTLLDRVKVEAYGQLMPLKQVGNIGVMDVHTLI 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV++ ER I ++NLGLNP  +GQ +R+ +P  TEERR   VK+   + E SK+
Sbjct: 68  VQVWDKSMVSATERAIRDANLGLNPSADGQNIRVSIPPLTEERRKEFVKLTKKFGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD +  ++K  K    SED     + +   +     K +      K+KEIM  
Sbjct: 128 SLRNLRRDMIHDIEKLEKDKAISEDDKNRGKKEADDLLHKFEKQLSDLIALKEKEIMEV 186


>gi|282859177|ref|ZP_06268299.1| ribosome recycling factor [Prevotella bivia JCVIHMP010]
 gi|282587996|gb|EFB93179.1| ribosome recycling factor [Prevotella bivia JCVIHMP010]
          Length = 186

 Score =  202 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/180 (39%), Positives = 110/180 (61%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   KDRM     +L +++  +R GR + ++LD V+V +YG  V LNQVA V V + R +
Sbjct: 8   LSEAKDRMEMAAMYLDEELQRIRAGRANVAILDGVRVSSYGQMVALNQVATVMVPDARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WDK+ +  +E+ I +S++G+ P   G+++R+ +P+ TEERR  LVK  +   EK+K
Sbjct: 68  AIKPWDKKAIKDIEKAIMDSDVGITPENNGEMIRLNLPQPTEERRKELVKQCNKIGEKTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I +RNIR D  + LKK+ K G  SED+    E ++QKI D  IK ++     K+KE+M  
Sbjct: 128 IQIRNIRADIKEILKKAIKDG-LSEDLEKDAETELQKIHDKYIKRVEELLAAKEKEVMTV 186


>gi|170781205|ref|YP_001709537.1| ribosome recycling factor [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|190360238|sp|B0REP7|RRF_CLAMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|169155773|emb|CAQ00894.1| ribosome recycling factor [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 185

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/181 (33%), Positives = 105/181 (58%), Gaps = 3/181 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +DRMG  +  +K+D  ++RTGR +P++   V VE YGS  PL Q+A++   E R L
Sbjct: 7   LADARDRMGKAVEAVKEDFGSVRTGRANPALFQKVMVEYYGSPTPLGQLASMNNPEARTL 66

Query: 67  VVSVWDKEMVASVERGIHE-SNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +V+ +DK  +  +E+ +    NL      +G+++R  +PE TE+RR   VK+    AE+ 
Sbjct: 67  IVTPYDKTALKEIEKALVNVPNLSATVGNDGEMVRFTLPELTEDRRKEFVKIVRGKAEEG 126

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++SVRNIRR   D L   +  G+  +D VA +E +++ +T +    +D   + K+ E++ 
Sbjct: 127 RVSVRNIRRRSKDELDALK--GEVGDDEVARVEKELEALTKTHTDQVDDALKRKETELLE 184

Query: 186 F 186
            
Sbjct: 185 V 185


>gi|224531659|ref|ZP_03672291.1| ribosome recycling factor [Borrelia valaisiana VS116]
 gi|224511124|gb|EEF81530.1| ribosome recycling factor [Borrelia valaisiana VS116]
          Length = 184

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/177 (38%), Positives = 109/177 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+ 
Sbjct: 8   LDEKMSKVLLSLDNEYKTLRTGRISSNIFDKIFIQYHGQRTPITQVSSIRIPEARLVVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS 
Sbjct: 68  PWDKSILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKIST 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIR+D  + +KK  K  + +ED +  + +DIQK TD  IK ID+  E K +EIM  
Sbjct: 128 RNIRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDIYIKKIDTILESKIQEIMEV 184


>gi|189485408|ref|YP_001956349.1| ribosome recycling factor [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|254809541|sp|B1H056|RRF_UNCTG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|170287367|dbj|BAG13888.1| ribosome recycling factor [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 186

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/180 (34%), Positives = 115/180 (63%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
               ++ M  TI  LK ++ ++RTGRV+ + ++ +KVE+YGS +P+NQ+A+++V + R +
Sbjct: 7   FSAAEEVMKRTIDRLKCELSSIRTGRVNSAAIETIKVESYGSIMPINQIASISVSDARTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD   ++++E+ I ++++G++P  +G+++R+ VP  T+ERR  + K     AE+ +
Sbjct: 67  EIRPWDVSQLSAIEKAILKADIGMSPANDGKLIRVSVPHLTQERRKEIAKSIGKMAEEFR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RN RR  ++++KK  K    +ED    LE + QK+TD  IK ID     K+KE+M  
Sbjct: 127 VAIRNERRVLVENIKKLEKDKVITEDDKKKLEVEAQKVTDGYIKKIDDSIVVKEKEVMQV 186


>gi|302392360|ref|YP_003828180.1| ribosome recycling factor [Acetohalobium arabaticum DSM 5501]
 gi|302204437|gb|ADL13115.1| ribosome recycling factor [Acetohalobium arabaticum DSM 5501]
          Length = 185

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/179 (34%), Positives = 110/179 (61%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  + +M + I  +K D   +RTGR  PS+++ +  + YG+  P+NQ+A V+  EPR LV
Sbjct: 7   KKTQQKMEEVIDEVKDDFDQIRTGRAKPSLIEGITADYYGTKTPINQMAKVSAPEPRQLV 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  WD  ++  +E+ I +S+L L+P  +G+V+RI +P+ TEE+R   V +A+  AE+ +I
Sbjct: 67  IQPWDDGVLEDIEKAIMKSDLDLSPNNDGEVIRINIPKLTEEKRKEYVSLANDKAEEHRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +RN+RR+  D L++   +G+ SED       +IQ +TD  I  +D   ++K++ I+  
Sbjct: 127 EIRNLRREANDELEELETAGEISEDNYHRGLENIQDLTDEYIAKVDELLDKKEEAILAI 185


>gi|125590832|gb|EAZ31182.1| hypothetical protein OsJ_15282 [Oryza sativa Japonica Group]
          Length = 260

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 2/174 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
              +M   +  L +++  LRTGR SP MLD + VE  G  V LN++A V+VL+   L V 
Sbjct: 86  ATQQMEAAVVALSRELSKLRTGRASPGMLDHIMVETTGVKVALNRLAVVSVLDAHTLSVM 145

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D   + S+E  I  S LG+NP  +G  +   +P  T+E   AL KV    AE  K S+
Sbjct: 146 PYDPSSMKSIEHAIISSPLGINPTPDGNRIIANIPPLTKENIQALCKVVTKSAEDFKQSI 205

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R  R+  +D +KKS  +    +D V  LE +++++T   IK+ D   + K+KEI
Sbjct: 206 RRARQKALDTIKKS--ASGMPKDDVKRLEKEVEELTKKFIKSADDMCKAKEKEI 257


>gi|116787688|gb|ABK24606.1| unknown [Picea sitchensis]
          Length = 269

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/175 (36%), Positives = 100/175 (57%), Gaps = 2/175 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
              +M   I  L +++  LRTGR S  MLD + +E+ G   PL+++A ++VL+ + L V+
Sbjct: 95  ASTQMQAGIDALSRELSKLRTGRASAGMLDHIIIESDGVRTPLSRIAAISVLDSQTLSVT 154

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D E +  VER I  S LGLNP +EGQ L +P+P  T+E   A+ K+    +E  K S+
Sbjct: 155 PYDLEAIKDVERAIVSSPLGLNPTLEGQRLVVPIPALTKEHTQAMSKLVSKASEDVKQSI 214

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R  R+  +D +KK+      S+D V  LE +I  +T   +K  +   + K+KEIM
Sbjct: 215 RRARQKALDSIKKAV--SSMSKDDVKRLEKEIDDLTKKFVKTAEDMCKAKEKEIM 267


>gi|148910289|gb|ABR18224.1| unknown [Picea sitchensis]
          Length = 269

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/175 (36%), Positives = 100/175 (57%), Gaps = 2/175 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
              +M   I  L +++  LRTGR S  MLD + +E+ G   PL+++A V+VL+ + L V+
Sbjct: 95  ASTQMQAGIDALSRELSKLRTGRASAGMLDHIIIESDGVRTPLSRIAAVSVLDSQTLSVT 154

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D + +  VER I  S LGLNP +EGQ L +P+P  T+E   A+ K+    +E  K S+
Sbjct: 155 PYDLDAIKDVERAIVSSPLGLNPTLEGQRLVVPIPALTKEHTQAMSKLVSKASEDVKQSI 214

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R  R+  +D +KK+      S+D V  LE +I  +T   +K  +   + K+KEIM
Sbjct: 215 RRARQKALDSIKKAV--SSMSKDDVKRLEKEIDDLTKKFVKTAEDMCKTKEKEIM 267


>gi|290890488|ref|ZP_06553563.1| hypothetical protein AWRIB429_0953 [Oenococcus oeni AWRIB429]
 gi|290479884|gb|EFD88533.1| hypothetical protein AWRIB429_0953 [Oenococcus oeni AWRIB429]
          Length = 180

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 74/183 (40%), Positives = 117/183 (63%), Gaps = 3/183 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +IDL+ +K+RMG      + +++ +R GR +P++L+ ++VE YG+  PLNQ+A+V + E 
Sbjct: 1   MIDLKEVKERMGKVSKAFQNELINIRAGRANPNILNKIQVEYYGTPTPLNQLASVQIPEA 60

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R+L+++ +DK  + ++E+ I  S+LGL P  +G  +R+ +P+ TE+ R  LVK   A AE
Sbjct: 61  RVLLITPYDKTSLKAIEQAIFASDLGLTPQNDGSAIRLIIPQLTEDSRKELVKQVKAEAE 120

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K+K++ RN R D M  LK   K    SED     E+DIQK TD  IK+ID   + K+KE+
Sbjct: 121 KAKVAARNTRHDFMSDLK---KDNDLSEDSRHRTEDDIQKATDLEIKDIDRIADIKEKEL 177

Query: 184 MHF 186
           M  
Sbjct: 178 MEI 180


>gi|195953623|ref|YP_002121913.1| ribosome recycling factor [Hydrogenobaculum sp. Y04AAS1]
 gi|259494546|sp|B4U9X4|RRF_HYDS0 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|195933235|gb|ACG57935.1| ribosome recycling factor [Hydrogenobaculum sp. Y04AAS1]
          Length = 182

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 69/180 (38%), Positives = 108/180 (60%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  ++ M  +I+  K ++   RTGR S S+++ +K+E YGS VP+ QV NV+V EP  +
Sbjct: 6   LEEAEESMKKSINHFKSELAGFRTGRASTSLVEDIKIEYYGSRVPIKQVGNVSVPEPNQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++ VWD+  ++ +E+ I E  L LNP  +G  LRI +P  T+ERR  LVK+ H   E++K
Sbjct: 66  LIQVWDQNAISPIEKAIMEQ-LSLNPARQGNTLRITLPPLTQERRKELVKLLHKTTEEAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD  + ++        SED +    + +QKITD  I  I +    K+KEI   
Sbjct: 125 VAIRNIRRDAKEMIESLE---GISEDEIKRALDKLQKITDHYIDEISNLSSSKEKEITEL 181


>gi|296129334|ref|YP_003636584.1| ribosome recycling factor [Cellulomonas flavigena DSM 20109]
 gi|296021149|gb|ADG74385.1| ribosome recycling factor [Cellulomonas flavigena DSM 20109]
          Length = 185

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 61/180 (33%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   K+D   +RTGR + +M   + V+ YG+  PL Q+A+  V+E R +
Sbjct: 6   LLEAEEKMDKAVEVAKEDFAAIRTGRANAAMFAKIFVDYYGAPTPLQQLASFNVVEARTI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +VS +DK    ++E+ + +S+LG+NP  +G V+R+ +P  T ERR   VK+A + AE ++
Sbjct: 66  LVSPFDKSSTTAIEKALRDSDLGVNPTNDGNVVRVVLPALTAERRKDFVKLAKSKAEDAR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ISVR++RR   + L +  K G+A ED VA  E +++ +T   ++ +D     K+ E++  
Sbjct: 126 ISVRSVRRRAKEELDRIAKDGEAGEDEVARAEKELEVLTKKHVELVDQLLASKESELLEV 185


>gi|115459126|ref|NP_001053163.1| Os04g0490400 [Oryza sativa Japonica Group]
 gi|21740669|emb|CAD41132.1| OSJNBa0084K20.10 [Oryza sativa Japonica Group]
 gi|38347444|emb|CAE02486.2| OSJNBa0076N16.8 [Oryza sativa Japonica Group]
 gi|113564734|dbj|BAF15077.1| Os04g0490400 [Oryza sativa Japonica Group]
 gi|125548818|gb|EAY94640.1| hypothetical protein OsI_16419 [Oryza sativa Indica Group]
 gi|215704152|dbj|BAG92992.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 260

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 2/174 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
              +M   +  L +++  LRTGR SP MLD + VE  G  V LN++A V+VL+   L V 
Sbjct: 86  ATQQMEAAVVALSRELSKLRTGRASPGMLDHIMVETTGVKVALNRLAVVSVLDAHTLSVM 145

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D   + S+E  I  S LG+NP  +G  +   +P  T+E   AL KV    AE  K S+
Sbjct: 146 PYDPSSMKSIEHAIISSPLGINPTPDGNRIIANIPPLTKENIQALCKVVTKSAEDFKQSI 205

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R  R+  +D +KKS  +    +D V  LE +++++T   IK+ D   + K+KEI
Sbjct: 206 RRARQKALDTIKKS--ASGMPKDDVKRLEKEVEELTKKFIKSADDMCKAKEKEI 257


>gi|116491008|ref|YP_810552.1| ribosome recycling factor [Oenococcus oeni PSU-1]
 gi|118586854|ref|ZP_01544288.1| ribosome recycling factor [Oenococcus oeni ATCC BAA-1163]
 gi|122276810|sp|Q04F85|RRF_OENOB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116091733|gb|ABJ56887.1| ribosome recycling factor [Oenococcus oeni PSU-1]
 gi|118432686|gb|EAV39418.1| ribosome recycling factor [Oenococcus oeni ATCC BAA-1163]
          Length = 180

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 74/183 (40%), Positives = 117/183 (63%), Gaps = 3/183 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +IDL+ +K+RMG      + +++ +R GR +P++L+ ++VE YG+  PLNQ+A+V + E 
Sbjct: 1   MIDLKEVKERMGKVSKAFQNELINIRAGRANPNILNKIQVEYYGAPTPLNQLASVQIPEA 60

Query: 64  RMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           R+L+++ +DK  + ++E+ I  S+LGL P  +G  +R+ +P+ TE+ R  LVK   A AE
Sbjct: 61  RVLLITPYDKTSLKAIEQAIFASDLGLTPQNDGSAIRLIIPQLTEDSRKELVKQVKAEAE 120

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K+K++ RN R D M  LK   K    SED     E+DIQK TD  IK+ID   + K+KE+
Sbjct: 121 KAKVAARNTRHDFMSDLK---KDNDLSEDSRHRTEDDIQKATDLEIKDIDRIADIKEKEL 177

Query: 184 MHF 186
           M  
Sbjct: 178 MEI 180


>gi|111114943|ref|YP_709561.1| ribosome recycling factor [Borrelia afzelii PKo]
 gi|218249310|ref|YP_002374649.1| ribosome recycling factor [Borrelia burgdorferi ZS7]
 gi|123145787|sp|Q0SP43|RRF_BORAP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|226703255|sp|B7J154|RRF_BORBZ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|110890217|gb|ABH01385.1| ribosome releasing factor [Borrelia afzelii PKo]
 gi|218164498|gb|ACK74559.1| ribosome recycling factor [Borrelia burgdorferi ZS7]
          Length = 184

 Score =  201 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 69/177 (38%), Positives = 109/177 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+ 
Sbjct: 8   LDEKMSKVLLSLDNEYKTLRTGRISSNIFDKIFIQYHGQRTPITQVSSIRIPEARLVVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS 
Sbjct: 68  PWDKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKIST 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIR+D  + +KK  K  + +ED +  + +DIQK TD  IK ID+  E K +EIM  
Sbjct: 128 RNIRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDIYIKKIDAILESKIQEIMEV 184


>gi|225552204|ref|ZP_03773144.1| ribosome recycling factor [Borrelia sp. SV1]
 gi|225371202|gb|EEH00632.1| ribosome recycling factor [Borrelia sp. SV1]
          Length = 184

 Score =  201 bits (512), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 70/176 (39%), Positives = 109/176 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+ 
Sbjct: 8   LDEKMSKVLLSLDNEYKTLRTGRISSNIFDRIFIQYHGQRTPITQVSSIRIPEARLVVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS 
Sbjct: 68  PWDKSILNKIEQAILNSDLSMNPSGDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKIST 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RNIR+D  + +KK  K  + +ED +  + +DIQK TD  IK IDS  E K +EIM 
Sbjct: 128 RNIRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDMYIKKIDSILESKIQEIME 183


>gi|216263749|ref|ZP_03435743.1| ribosome recycling factor [Borrelia afzelii ACA-1]
 gi|215979793|gb|EEC20615.1| ribosome recycling factor [Borrelia afzelii ACA-1]
          Length = 184

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 69/177 (38%), Positives = 109/177 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+ 
Sbjct: 8   LDEKMSKVLLSLDNEYKTLRTGRISSNIFDKIFIQYHGQKTPITQVSSIRIPEARLVVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS 
Sbjct: 68  PWDKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKIST 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIR+D  + +KK  K  + +ED +  + +DIQK TD  IK ID+  E K +EIM  
Sbjct: 128 RNIRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDIYIKKIDAILESKIQEIMEV 184


>gi|91214958|ref|ZP_01251930.1| ribosome releasing factor [Psychroflexus torquis ATCC 700755]
 gi|91186563|gb|EAS72934.1| ribosome releasing factor [Psychroflexus torquis ATCC 700755]
          Length = 184

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 77/188 (40%), Positives = 118/188 (62%), Gaps = 6/188 (3%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           MN+ I+  + + K+ M   I  L+K + ++R G+ +PSML  V V+ YG+  P++QV+N+
Sbjct: 1   MNEEIEFIIDSTKESMEQAIQHLRKQLASIRAGKANPSMLSSVMVQYYGAKTPISQVSNI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
              + R L +  ++K ++  +E+GI  +NLG NP+  G+ + I VP  TEERRL L K A
Sbjct: 61  NTPDARTLTIQPFEKSIIKDIEKGIMNANLGFNPMNNGESVIINVPPLTEERRLQLSKKA 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A AE++KI VRN RR+ M+ +KK+       ED+    E+DIQK+TDS I+ ID  +  
Sbjct: 121 KAEAEEAKIGVRNDRRNAMNEIKKA----DLPEDVQKDTEDDIQKLTDSFIEEIDKIYAS 176

Query: 179 KKKEIMHF 186
           K+KEIM  
Sbjct: 177 KEKEIMTV 184


>gi|50365372|ref|YP_053797.1| ribosome recycling factor [Mesoplasma florum L1]
 gi|60390251|sp|Q6F0R0|RRF_MESFL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|50363928|gb|AAT75913.1| ribosome recycling factor [Mesoplasma florum L1]
          Length = 181

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 76/186 (40%), Positives = 118/186 (63%), Gaps = 5/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++++ +   + +M DT+   ++ + T+RTGR S +MLD V V  YG+  P+NQ A ++ 
Sbjct: 1   MDEILLI--AEQQMEDTVVAWQEHIKTIRTGRASATMLDKVMVNYYGTPTPVNQTAQIST 58

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP++LV+  WDK ++  V   I++S+L LNP+ + +V+RI +P  TEE R  LVK  + 
Sbjct: 59  PEPQLLVIKPWDKTLIQEVVAAINKSDLNLNPVSDAEVVRINIPALTEEIRKDLVKKMNK 118

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  K+ +RNIRRD +D  K   K    SED+V  +E DIQK+TDS+IK +D   + K+
Sbjct: 119 ELENFKVRIRNIRRDSIDTAK---KDKSISEDVVKGIETDIQKLTDSSIKQLDEISKVKE 175

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 176 KELMAI 181


>gi|289549254|ref|YP_003474242.1| ribosome recycling factor [Thermocrinis albus DSM 14484]
 gi|289182871|gb|ADC90115.1| ribosome recycling factor [Thermocrinis albus DSM 14484]
          Length = 182

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 63/178 (35%), Positives = 108/178 (60%), Gaps = 4/178 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            ++ ++ M   ++  K ++  LRTGR S ++++ +KV+ YGS VP+ Q+ ++T+ EP  +
Sbjct: 6   FKSAEEDMKKAVNHFKNEIAGLRTGRASTALVEELKVDYYGSKVPIKQLGSITIPEPNQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++ VWD   V+++E+ I E NL L P  +G  LRI +P  TEERR  +V++ H  AE+++
Sbjct: 66  LIQVWDSNAVSAIEKAIME-NLQLTPQKQGNTLRITLPPPTEERRREMVRLLHKMAEEAR 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           ++VRN RRD  + ++        SED +      +QK+TD  I  I+   E K+ EI+
Sbjct: 125 VAVRNARRDAKEMIEDME---GISEDEIKRALERLQKLTDKYIDEINKLTEAKETEIL 179


>gi|255071027|ref|XP_002507595.1| ribosomal recyclingfactor [Micromonas sp. RCC299]
 gi|226522870|gb|ACO68853.1| ribosomal recyclingfactor [Micromonas sp. RCC299]
          Length = 170

 Score =  200 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 59/173 (34%), Positives = 98/173 (56%), Gaps = 3/173 (1%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M  TI  +++   T+RTGR SP +L+ + V+ YG+  PL  +AN +  + + +V+  +D+
Sbjct: 1   MEKTIETVREKFNTVRTGRASPKILNRINVDYYGTLAPLITIANASTPDSQTIVIQPFDR 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
            ++  +ER I  S+LGLNP  +G  +R+ +P  T ERR  L K+     E+ K+++RN+R
Sbjct: 61  TIINDIERAIMLSDLGLNPSNDGACIRLSIPPLTAERRQELAKLVSKLGEEGKVALRNVR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD M  + K       SED V SLE  I  +T   ++ +    +EK+ +I   
Sbjct: 121 RDAMKSIGKVE---GVSEDDVKSLEEAIDTLTSDFVRKVGELVKEKEDDIFKV 170


>gi|224055693|ref|XP_002298606.1| predicted protein [Populus trichocarpa]
 gi|222845864|gb|EEE83411.1| predicted protein [Populus trichocarpa]
          Length = 273

 Score =  200 bits (509), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 2/176 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +    +M   +  L +++  LRTGR S  MLD + VE  G  +PLN+ A V+V++ + L 
Sbjct: 97  ETANSQMDAAVVALSRELQKLRTGRASAGMLDHIIVETDGVKLPLNRSAVVSVMDAKTLS 156

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +D   +  +E  I  S LGLNP  +G  L   +P  T+E   A+ KV     E  + 
Sbjct: 157 VNPYDPNTLKQLENAIVSSPLGLNPQRDGDRLIAAIPPLTKEHTQAMCKVVAKSCEDCRQ 216

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           S+R  R+  MD +KK+       +D    LE +I+++T   +K+ +     K+KEI
Sbjct: 217 SIRRARQKAMDTVKKA--GSSFPKDDAKKLEKEIEEMTKKFVKSAEDMCNNKEKEI 270


>gi|261880120|ref|ZP_06006547.1| ribosome recycling factor [Prevotella bergensis DSM 17361]
 gi|270333204|gb|EFA43990.1| ribosome recycling factor [Prevotella bergensis DSM 17361]
          Length = 186

 Score =  200 bits (509), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 119/180 (66%), Gaps = 1/180 (0%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +D+M +   +L++++  +R GR + +++D V+V AYG  VPLNQVA V++ + R +
Sbjct: 8   LKSAEDKMSNGAKYLEEELARVRAGRANVAIVDGVRVNAYGESVPLNQVATVSIADARTI 67

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  WD++ +A VE+GI +S++G+ P   G+++ + +P+ TEERR  LVK  +   E++K
Sbjct: 68  TIRPWDRKQIADVEKGIMDSDVGITPENNGEMVILHLPQPTEERRKELVKQCNKIGEQTK 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +RNIR +  D LKK+ K G  SED     END+QK+ D  IKN+++  E K KEIM  
Sbjct: 128 VQIRNIRSEYKDKLKKAVKDG-LSEDAGKDAENDLQKLHDKYIKNVEAILEAKHKEIMTV 186


>gi|192360685|ref|YP_001981611.1| ribosome recycling factor [Cellvibrio japonicus Ueda107]
 gi|190686850|gb|ACE84528.1| ribosome recycling factor [Cellvibrio japonicus Ueda107]
          Length = 150

 Score =  200 bits (509), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 63/150 (42%), Positives = 92/150 (61%)

Query: 37  MLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG 96
           MLD V+V  YG+  PL+QVAN+ V + R L VS W++ +V  +E+ I +S+LGLNP    
Sbjct: 1   MLDGVRVNYYGTETPLSQVANINVEDARTLSVSPWERNLVPDIEKAIMKSDLGLNPSTNN 60

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
            ++RIP+P  TEE R   +K A A AE ++++VRN+RRD +  +K   K    SED    
Sbjct: 61  GLIRIPLPMLTEETRKNFIKQARAEAENARVAVRNVRRDVLADVKALLKDKAISEDDERR 120

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            ++DIQKITD  I  +D     K+ ++M  
Sbjct: 121 AQDDIQKITDKFIAEVDKALSAKETDLMAI 150


>gi|223889153|ref|ZP_03623742.1| ribosome recycling factor [Borrelia burgdorferi 64b]
 gi|223885402|gb|EEF56503.1| ribosome recycling factor [Borrelia burgdorferi 64b]
          Length = 184

 Score =  200 bits (509), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 69/174 (39%), Positives = 107/174 (61%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M   +  L  +  TLRTGR+S ++ D + ++ +    P+ QV+++ + E R++V+  W
Sbjct: 10  EKMNKVLLSLDNEYKTLRTGRISSNIFDRICIQYHDRRTPITQVSSIRIPEARLVVIQPW 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS RN
Sbjct: 70  DKSILNKIEQAILNSDLSMNPSNDGSVIRIKVPNLTSERRQEIVKHAKKIAEEHKISTRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IR+D  + +KK  K  + +ED +  + +DIQK TD  IK IDS  E K +EIM 
Sbjct: 130 IRQDLNNKVKKQEKESEITEDCLKRILDDIQKSTDMYIKKIDSILESKIQEIME 183


>gi|42563413|ref|NP_186829.3| ribosome recycling factor family protein / ribosome releasing
           factor family protein [Arabidopsis thaliana]
 gi|34146850|gb|AAQ62433.1| At3g01800 [Arabidopsis thaliana]
 gi|51970776|dbj|BAD44080.1| putative ribosome recycling factor [Arabidopsis thaliana]
 gi|62319213|dbj|BAD94407.1| putative ribosome recycling factor [Arabidopsis thaliana]
 gi|332640195|gb|AEE73716.1| ribosome recycling factor [Arabidopsis thaliana]
          Length = 267

 Score =  199 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/176 (35%), Positives = 99/176 (56%), Gaps = 2/176 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
              +M   I  L +D+  LRTGR +P MLD + VE  G  +PLN +A V+VL+P+ L V+
Sbjct: 93  ASSQMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVN 152

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D + V  +E+ I  S LGLNP ++GQ L   +P  T+E   A+ K+    +E  K S+
Sbjct: 153 PYDPDTVKELEKAIVASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSI 212

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R  R+  +D +KK+       +D V  LE ++ ++T   +K+ +   + K+KEI  
Sbjct: 213 RRARQKALDTIKKA--GSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEITE 266


>gi|163783687|ref|ZP_02178674.1| ribosome recycling factor [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881012|gb|EDP74529.1| ribosome recycling factor [Hydrogenivirga sp. 128-5-R1-1]
          Length = 184

 Score =  199 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 107/180 (59%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  +  M  ++   + ++  +RTGR S ++++ +KVE YGS VPL Q+ N++V E   +
Sbjct: 9   LRETEKDMRKSVEHFRGEIAGIRTGRASTALVEELKVEYYGSRVPLKQLGNISVPEHNQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++ VWD   + ++E+ I E  L LNP  +G  +RI +P  TEERR  L ++ H  AE+++
Sbjct: 69  LIQVWDNNAIPAIEKTIREE-LNLNPNTQGNTIRINLPPLTEERRKELARMLHKLAEEAR 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD  + +++       SED        +QK+TD  I  I+   E+K++EIM  
Sbjct: 128 VAVRNIRRDAKELIEELE---GISEDEKKRALERLQKLTDKHIDEINKLLEKKEEEIMTV 184


>gi|15594466|ref|NP_212255.1| ribosome recycling factor [Borrelia burgdorferi B31]
 gi|226321968|ref|ZP_03797493.1| ribosome recycling factor [Borrelia burgdorferi Bol26]
 gi|3914875|sp|O51147|RRF_BORBU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|2688011|gb|AAC66513.1| ribosome releasing factor (frr) [Borrelia burgdorferi B31]
 gi|226232558|gb|EEH31312.1| ribosome recycling factor [Borrelia burgdorferi Bol26]
          Length = 184

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/176 (39%), Positives = 108/176 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  TLRTGR+S ++ D + ++ +    P+ QV+++ + E R++V+ 
Sbjct: 8   LDEKMNKVLLSLDNEYKTLRTGRISSNIFDRICIQYHDRRTPITQVSSIRIPEARLVVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS 
Sbjct: 68  PWDKSILNKIEQAILNSDLSMNPSNDGSVIRIKVPNLTSERRQEIVKHAKKIAEEHKIST 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RNIR+D  + +KK  K  + +ED +  + +DIQK TD  IK IDS  E K +EIM 
Sbjct: 128 RNIRQDLNNKVKKQEKESEITEDCLKRILDDIQKSTDMYIKKIDSILESKIQEIME 183


>gi|51971543|dbj|BAD44436.1| putative ribosome recycling factor [Arabidopsis thaliana]
          Length = 267

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/176 (35%), Positives = 99/176 (56%), Gaps = 2/176 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
              +M   I  L +D+  LRTGR +P MLD + VE  G  +PLN +A V+VL+P+ L V+
Sbjct: 93  ASSQMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVN 152

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D + V  +E+ I  S LGLNP ++GQ L   +P  T+E   A+ K+    +E  K S+
Sbjct: 153 PYDPDTVKELEKAIVASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVVKQSI 212

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R  R+  +D +KK+       +D V  LE ++ ++T   +K+ +   + K+KEI  
Sbjct: 213 RRARQKALDTIKKA--GSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEITE 266


>gi|78188304|ref|YP_378642.1| ribosome recycling factor [Chlorobium chlorochromatii CaD3]
 gi|123580409|sp|Q3ATS6|RRF_CHLCH RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|78170503|gb|ABB27599.1| ribosome recycling factor [Chlorobium chlorochromatii CaD3]
          Length = 186

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 108/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q I+ +M   +   + ++ T+RTG+ + ++LD VKVEAYG  +PL QV NV+V +   L+
Sbjct: 8   QKIEPKMKKCLEAFQHEITTIRTGKATTTLLDRVKVEAYGQQMPLKQVGNVSVQDAHTLM 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWDK MV++ E+ I ++NLGLNP  EGQ +R+ +P  TEERR   VK+   + E SK+
Sbjct: 68  VQVWDKSMVSATEKAIRDANLGLNPAAEGQSIRVSIPPLTEERRKEFVKLTKKFGEDSKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RN+RRD +  ++K  K+   SED     + D   +     K +      K+KEIM  
Sbjct: 128 SLRNLRRDMIQDIEKLEKAKAVSEDEKNKGKKDADDLLHKYEKLLMDMITAKEKEIMAV 186


>gi|195941859|ref|ZP_03087241.1| ribosome releasing factor (frr) [Borrelia burgdorferi 80a]
 gi|216264175|ref|ZP_03436167.1| ribosome recycling factor [Borrelia burgdorferi 156a]
 gi|221217383|ref|ZP_03588854.1| ribosome recycling factor [Borrelia burgdorferi 72a]
 gi|224532925|ref|ZP_03673535.1| ribosome recycling factor [Borrelia burgdorferi WI91-23]
 gi|224533972|ref|ZP_03674556.1| ribosome recycling factor [Borrelia burgdorferi CA-11.2a]
 gi|225549303|ref|ZP_03770276.1| ribosome recycling factor [Borrelia burgdorferi 94a]
 gi|225549848|ref|ZP_03770810.1| ribosome recycling factor [Borrelia burgdorferi 118a]
 gi|226320687|ref|ZP_03796245.1| ribosome recycling factor [Borrelia burgdorferi 29805]
 gi|215980648|gb|EEC21455.1| ribosome recycling factor [Borrelia burgdorferi 156a]
 gi|221192661|gb|EEE18877.1| ribosome recycling factor [Borrelia burgdorferi 72a]
 gi|224512124|gb|EEF82515.1| ribosome recycling factor [Borrelia burgdorferi WI91-23]
 gi|224512808|gb|EEF83175.1| ribosome recycling factor [Borrelia burgdorferi CA-11.2a]
 gi|225369539|gb|EEG98990.1| ribosome recycling factor [Borrelia burgdorferi 118a]
 gi|225370161|gb|EEG99601.1| ribosome recycling factor [Borrelia burgdorferi 94a]
 gi|226233903|gb|EEH32626.1| ribosome recycling factor [Borrelia burgdorferi 29805]
 gi|312148392|gb|ADQ31051.1| ribosome recycling factor [Borrelia burgdorferi JD1]
 gi|312149152|gb|ADQ29223.1| ribosome recycling factor [Borrelia burgdorferi N40]
          Length = 184

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/176 (39%), Positives = 108/176 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  TLRTGR+S ++ D + ++ +    P+ QV+++ + E R++V+ 
Sbjct: 8   LDEKMNKVLLSLDNEYKTLRTGRISSNIFDRICIQYHDRRTPITQVSSIRIPEARLVVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS 
Sbjct: 68  PWDKSILNKIEQAILNSDLSMNPSNDGSVIRIKVPNLTSERRQEIVKHAKKIAEEHKIST 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           RNIR+D  + +KK  K  + +ED +  + +DIQK TD  IK IDS  E K +EIM 
Sbjct: 128 RNIRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDMYIKKIDSILESKIQEIME 183


>gi|330814009|ref|YP_004358248.1| ribosome recycling factor [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487104|gb|AEA81509.1| ribosome recycling factor [Candidatus Pelagibacter sp. IMCC9063]
          Length = 173

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 84/173 (48%), Positives = 119/173 (68%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M +TI  L +D+ T+RTGR   SMLDL+KVE YG  +P+NQVA ++  E ++L V VWD 
Sbjct: 1   MQNTIQSLTQDLSTIRTGRAHVSMLDLIKVEVYGQKMPINQVATISTPESQLLTVQVWDA 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             V  V++ + ES+L +NP V+GQ++R+PVP+ +EERRL L+K+    +EK KIS+RNIR
Sbjct: 61  ANVKFVDKALRESDLNINPTVDGQIVRVPVPKLSEERRLDLIKIVKNQSEKIKISIRNIR 120

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           R+GMD LK   K+   SED  A L N++Q+ITD  I  +D    EK++EI+  
Sbjct: 121 REGMDLLKNLLKNKDISEDDNAKLSNELQQITDKFINEVDKKISEKEQEIIKV 173


>gi|87310510|ref|ZP_01092639.1| Ribosome recycling factor [Blastopirellula marina DSM 3645]
 gi|87286731|gb|EAQ78636.1| Ribosome recycling factor [Blastopirellula marina DSM 3645]
          Length = 186

 Score =  198 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 106/177 (59%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             +DRM   I  LK ++  +RTGR +P ++D ++VE YGS  P+ Q+A+V+V EP  L++
Sbjct: 9   EAEDRMEKAIEHLKHNLSGIRTGRANPGLVDSLRVEVYGSLQPIKQIASVSVPEPTQLLI 68

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
             +D   +  +E+ I  S+LG+ P  +G+V+R+ VP  + E R  LV      +E++K+S
Sbjct: 69  RPYDTGAIKDIEKAIVASDLGMAPQSDGRVIRLNVPALSTEVRKKLVSRIKELSEEAKVS 128

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RN+RRD     + + K+ +  ED+   ++N++Q++T    + +    + ++ E+M 
Sbjct: 129 IRNVRRDSNKSAETAEKNKEIGEDIRDDIKNEVQELTKKFEEKVAELAKTRETEVME 185


>gi|320103139|ref|YP_004178730.1| ribosome recycling factor [Isosphaera pallida ATCC 43644]
 gi|319750421|gb|ADV62181.1| ribosome recycling factor [Isosphaera pallida ATCC 43644]
          Length = 186

 Score =  198 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 57/179 (31%), Positives = 107/179 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + ++RM  ++S L + +  +RTGR +  ++D ++VE YG+  PL Q+AN++  EP+ +
Sbjct: 7   LLDAEERMEKSVSLLSEQLKGVRTGRATTGLVDSIRVEYYGNSTPLKQLANLSTPEPQQI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D++++  + + I  S LGLNP+ + +V+RI VP  + E+R  LV      AE+++
Sbjct: 67  LIRPFDQQILGDIIKAIQASELGLNPVSDNKVIRINVPSLSVEQRKKLVARVKDLAEEAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S+R+IRRD   H  +S      +ED  A  + +IQ +T      ++   ++K  EI+ 
Sbjct: 127 VSIRSIRRDANKHADQSMTDKILTEDDCAKCKEEIQNLTKKYEGKVNELADKKSAEILE 185


>gi|297622140|ref|YP_003710277.1| Ribosome recycling factor [Waddlia chondrophila WSU 86-1044]
 gi|297377441|gb|ADI39271.1| Ribosome recycling factor [Waddlia chondrophila WSU 86-1044]
          Length = 183

 Score =  198 bits (505), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 65/177 (36%), Positives = 106/177 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   + +M  +I  L  ++  +RTG+ +P+ML+ V VE YG+ + L  VA++T  EPR L
Sbjct: 4   IDQTEQKMKASIDHLTDELKKIRTGQANPAMLENVTVEVYGTSMKLRDVASITTPEPRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D      + +GI ++NLG  PIV+  V+RI +P+  E  R  +VK+ H   E++K
Sbjct: 64  LVTPYDANNTQVIGKGIEKANLGFRPIVDANVVRITIPQMDESVRQEMVKLCHKKREEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +S+RN+RRD  + ++K +  G+  EDM    E DIQ +TD   K  D     K+KE+
Sbjct: 124 VSIRNVRRDSNEAVRKQKTDGEIGEDMEKKFEKDIQILTDKYCKIADDVSSVKEKEV 180


>gi|219681604|ref|YP_002467990.1| ribosome recycling factor [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471290|ref|ZP_05635289.1| ribosome recycling factor [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254809497|sp|B8D931|RRF_BUCA5 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219624447|gb|ACL30602.1| ribosome recycling factor [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 185

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 114/186 (61%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   ID++  ++RM   I     ++  ++TGR SP++L  + +E +GS  PL QV+N+ V
Sbjct: 1   MINQIDIK-TRERMEACIQTFHNNISNIKTGRASPTLLHNIYIEYFGSKTPLRQVSNIIV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   L ++V+D  + + + + I  SNL LNP+++G+ + IP+P  TEERR  L+KV   
Sbjct: 60  EDSHTLKINVFDDSITSLIRKSILNSNLDLNPVLQGKDIIIPIPRLTEERRKQLIKVIRG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE S+I +RNIRRD  D +K+  K    SED   + ++ IQ +T+  IK ID   E+K+
Sbjct: 120 DAESSRIQIRNIRRDANDKVKRLLKDKIISEDNEHTSQSKIQIMTNEYIKKIDCILEKKE 179

Query: 181 KEIMHF 186
           KE+M F
Sbjct: 180 KELMKF 185


>gi|46447510|ref|YP_008875.1| putative ribosome recycling factor (ribosome releasing factor)
           [Candidatus Protochlamydia amoebophila UWE25]
 gi|60390257|sp|Q6M9Z9|RRF_PARUW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|46401151|emb|CAF24600.1| putative ribosome recycling factor (ribosome releasing factor)
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 183

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 70/177 (39%), Positives = 110/177 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K +M   I  LK D+  +RTGR +P M++ V +E YGS + L  VA+++  E R L
Sbjct: 4   VDQTKTKMITAIEHLKNDLKNIRTGRANPGMVEHVMIEVYGSPMRLKDVASISAPEARQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D +   S+ +GI ++NLGL PIV+   +RI +P  TEE R  + K+ H   EK+K
Sbjct: 64  LITPFDPQNAGSIGKGIEKANLGLMPIVDAHSVRIKIPPMTEEIRKKMAKICHEEKEKTK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +S+RNIRRD  +  +K +  G  +ED++  LE +IQ++TD   K  D   E+K+KEI
Sbjct: 124 VSIRNIRRDANELARKQKSEGIIAEDVLKKLEKNIQELTDKFCKEADEIAEKKEKEI 180


>gi|219682161|ref|YP_002468545.1| ribosome recycling factor [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|254809498|sp|B8D7D5|RRF_BUCAT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|219621894|gb|ACL30050.1| ribosome recycling factor [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311085975|gb|ADP66057.1| ribosome recycling factor [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086549|gb|ADP66630.1| ribosome recycling factor [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 185

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 114/186 (61%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   ID++  ++RM   I     ++  ++TGR SP++L  + +E +GS  PL QV+N+ V
Sbjct: 1   MINQIDIK-TRERMEACIQTFHNNINNIKTGRASPTLLHNIYIEYFGSKTPLRQVSNIIV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   L ++V+D  + + + + I  SNL LNP+++G+ + IP+P  TEERR  L+KV   
Sbjct: 60  EDSHTLKINVFDDSITSLIRKSILNSNLDLNPVLQGKDIIIPIPRLTEERRKQLIKVIRG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE S+I +RNIRRD  D +K+  K    SED   + ++ IQ +T+  IK ID   E+K+
Sbjct: 120 DAESSRIQIRNIRRDANDKVKRLLKDKIISEDNEHTSQSKIQIMTNEYIKKIDCILEKKE 179

Query: 181 KEIMHF 186
           KE+M F
Sbjct: 180 KELMKF 185


>gi|149196427|ref|ZP_01873482.1| ribosome releasing factor [Lentisphaera araneosa HTCC2155]
 gi|149140688|gb|EDM29086.1| ribosome releasing factor [Lentisphaera araneosa HTCC2155]
          Length = 188

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 58/180 (32%), Positives = 108/180 (60%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  I ++M   I+  +  +    TG+ +P+++  + V+AYG+ + L + A ++  + R +
Sbjct: 9   VDEITEKMDKAIAHFQSQIDAYSTGKATPALVQDIMVDAYGTKMRLKETAGISTPDARTI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D  ++  +E+ +  +N+G+ P+ +GQ++R+P+PE TE+RR  +VK      E+ K
Sbjct: 69  AIQPYDATILPDIEKALMMANIGITPMNDGQLIRLPIPELTEDRRKDMVKDLKGKGEEHK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++RNIRR+G D+LKK+ K  + SED    L  DIQ +T+  I  I S    K+K++M  
Sbjct: 129 INIRNIRREGNDYLKKALKDHELSEDHQKGLVTDIQDLTNKKIDEIASLSAAKEKDLMTV 188


>gi|51598384|ref|YP_072572.1| ribosome recycling factor [Borrelia garinii PBi]
 gi|60390245|sp|Q662P1|RRF_BORGA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|51572955|gb|AAU06980.1| ribosome releasing factor [Borrelia garinii PBi]
          Length = 184

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 67/177 (37%), Positives = 108/177 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+ 
Sbjct: 8   LDEKMSKVLLSLDNEYKTLRTGRISSNVFDKIFIQYHGQKTPITQVSSIRIPEARLVVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ K+S 
Sbjct: 68  PWDKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKVST 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIR+D  + +KK  K  + +ED +  + +DIQK  D  IK ID+  E K +EIM  
Sbjct: 128 RNIRQDLNNKVKKQEKESEITEDSLKRILDDIQKSIDIYIKRIDTILESKIQEIMEV 184


>gi|88855238|ref|ZP_01129903.1| ribosome recycling factor [marine actinobacterium PHSC20C1]
 gi|88815766|gb|EAR25623.1| ribosome recycling factor [marine actinobacterium PHSC20C1]
          Length = 183

 Score =  197 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 56/181 (30%), Positives = 99/181 (54%), Gaps = 4/181 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L    ++M   +   K D  T+RTGR +P++   V V+ YG+  PL Q+A++   E R L
Sbjct: 6   LAEASEKMDKALEAAKDDFGTVRTGRANPALFQKVLVDYYGTPTPLQQLASMVNQEARTL 65

Query: 67  VVSVWDKEMVASVERGIH-ESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +++ +DK  +  +E+ I    +LG +   +G V+R  +PE TEERR   VK+    AE++
Sbjct: 66  IITPFDKTALKDIEKAIAGAHHLGASVGNDGNVIRATLPELTEERRKDFVKIVRDKAEQA 125

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++S+RN+RR   D L       +  ED +A  E +++  T + +  +D   + K+ E++ 
Sbjct: 126 RVSLRNVRRKAKDDLDAL---TEVGEDEIARAEKELEASTKAHVDAVDDALKRKETELLE 182

Query: 186 F 186
            
Sbjct: 183 V 183


>gi|15616850|ref|NP_240063.1| ribosome recycling factor [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134310|sp|P57328|RRF_BUCAI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|25299706|pir||E84957 ribosome recycling factor [imported] - Buchnera sp. (strain APS)
 gi|10038914|dbj|BAB12949.1| ribosome recycling factor [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|311087130|gb|ADP67210.1| ribosome recycling factor [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087668|gb|ADP67747.1| ribosome recycling factor [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 185

 Score =  197 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 72/186 (38%), Positives = 114/186 (61%), Gaps = 1/186 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   ID++  ++RM   I     ++  ++TGR SP++L  + +E +GS  PL QV+N+ V
Sbjct: 1   MINQIDIK-TRERMEACIQTFHNNITNIKTGRASPTLLHNIYIEYFGSKTPLRQVSNIIV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +   L ++V+D  + + + + I  SNL LNP+++G+ + IP+P  TEERR  L+KV   
Sbjct: 60  EDSHTLKINVFDDSITSLIRKSILNSNLDLNPVLQGKDIIIPIPRLTEERRKQLIKVIRG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE S+I +RNIRRD  D +K+  K    SED   + ++ IQ +T+  IK ID   E+K+
Sbjct: 120 DAESSRIQIRNIRRDANDKVKRLLKDKIISEDNEHTSQSKIQIMTNEYIKKIDCILEKKE 179

Query: 181 KEIMHF 186
           KE+M F
Sbjct: 180 KELMKF 185


>gi|58585062|ref|YP_198635.1| ribosome recycling factor [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|75497580|sp|Q5GRI1|RRF_WOLTR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|58419378|gb|AAW71393.1| Ribosome recycling factor [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 185

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 74/177 (41%), Positives = 114/177 (64%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             K+RM  TI     D+  +RTGR S S+LD + V  YG H  LNQVA V+V + + L++
Sbjct: 8   KTKERMLKTIQSFYNDIKGIRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVTDNKTLLI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
            VWD  ++  V+  I  +NL LNP+VEG  +RI +P+ T+E R  LVK+ H +AE ++++
Sbjct: 68  KVWDIGVIGEVKNAILNANLNLNPVVEGNTIRIVLPDLTQETRERLVKLLHQFAENARVA 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +RNIRRD M+ +++ +++ K SED   + + +IQ ITD  IK ID     K+K+I++
Sbjct: 128 IRNIRRDIMEEIERMQENKKISEDDFHNAKKEIQNITDDNIKKIDGELSIKEKDILN 184


>gi|219684827|ref|ZP_03539769.1| ribosome recycling factor [Borrelia garinii PBr]
 gi|219671772|gb|EED28827.1| ribosome recycling factor [Borrelia garinii PBr]
          Length = 184

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 67/177 (37%), Positives = 108/177 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+ 
Sbjct: 8   LDEKMSKVLLSLDNEYKTLRTGRISSNVFDKIFIQYHGQKTPITQVSSIRIPEARLVVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ K+S 
Sbjct: 68  PWDKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTNERRQDIVKHAKKIAEEHKVST 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIR+D  + +KK  K  + +ED +  + +DIQK  D  IK ID+  E K +EIM  
Sbjct: 128 RNIRQDLNNKVKKQEKESEITEDNLKRILDDIQKSIDIYIKRIDTILESKIQEIMEV 184


>gi|242076314|ref|XP_002448093.1| hypothetical protein SORBIDRAFT_06g020970 [Sorghum bicolor]
 gi|241939276|gb|EES12421.1| hypothetical protein SORBIDRAFT_06g020970 [Sorghum bicolor]
          Length = 258

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 2/174 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
              +M   +  L +++  LRTGR +P MLD + VE  G  V LN++A V+VL+   L V 
Sbjct: 84  ATAQMDAAVIALSRELSKLRTGRATPGMLDHIMVENAGVKVALNRIAVVSVLDAHTLSVM 143

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D   + S+E  I  S LG+NP  +G  +   +P  T+E   AL KV    AE  K S+
Sbjct: 144 PYDPTSMKSIEHAIISSPLGINPTPDGNRIIAAIPPLTKENIQALCKVVTKSAEDFKQSI 203

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R  R+  +D +KKS  +    +D V  +E +++++T   IK+ D   + K+KEI
Sbjct: 204 RRARQKALDTIKKS--ASSMPKDDVKRIEKEVEELTKKFIKSADDMCKAKEKEI 255


>gi|21672509|ref|NP_660576.1| ribosome recycling factor [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009151|sp|Q8K9S8|RRF_BUCAP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|21623130|gb|AAM67787.1| ribosome recycling factor [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 185

 Score =  197 bits (501), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 71/178 (39%), Positives = 107/178 (60%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
              ++M   I+  +  +  +RTGR SP +L+ + VE +GS VPL Q++NV V     L +
Sbjct: 8   KSNEKMKVCINNFQIQVNNVRTGRASPELLNSIYVEYFGSKVPLRQISNVVVENYHTLKI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +++D    + +++ I  SNL LNPI+ G+ + +P+P  TEERR  L+KV    AE ++I 
Sbjct: 68  NIFDDSSTSLIKKAILNSNLDLNPILYGKDIIVPIPGLTEERRTHLIKVIRNNAENARIY 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRRD  D +K   KS   SED   + +N IQ +TD  IK ID    EK+K++M F
Sbjct: 128 IRNIRRDANDKIKNYLKSKIISEDNEHAAQNKIQTMTDDYIKKIDKILSEKEKDLMKF 185


>gi|42561130|ref|NP_975581.1| ribosome recycling factor [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|331703586|ref|YP_004400273.1| ribosome recycling factor [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|47116994|sp|P61306|RRF_MYCMS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|42492627|emb|CAE77223.1| ribosome recycling factor [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|301321457|gb|ADK70100.1| ribosome recycling factor [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
 gi|328802141|emb|CBW54295.1| Ribosome recycling factor [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 182

 Score =  197 bits (501), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 71/186 (38%), Positives = 115/186 (61%), Gaps = 4/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  +I L+N + +M +TI      +  +RTG+ S ++LD V V  YGS +PLNQ++ +T 
Sbjct: 1   MTDLI-LKNAELQMKETIDAYVIHLRQIRTGKASGAILDKVMVNYYGSLMPLNQISQITT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP ++++  +D+ ++      IH+++LGLNP+ +  ++RIP+   TE+ R  LVK  H 
Sbjct: 60  PEPNLIIIKPYDRNVITEAVGAIHKADLGLNPVSDATLIRIPIAPLTEDVRKNLVKKVHK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  KI +RNIRRD +D +KK       S+D+++  E+ IQ+ITD  IK +D   +EK+
Sbjct: 120 ELEGYKIRIRNIRRDAIDEIKKIE---NISKDLISDNEDQIQQITDKFIKQLDDLTKEKE 176

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 177 KELMTI 182


>gi|256384088|gb|ACU78658.1| ribosome recycling factor [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384920|gb|ACU79489.1| ribosome recycling factor [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455804|gb|ADH22039.1| ribosome recycling factor [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 182

 Score =  196 bits (500), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 71/186 (38%), Positives = 115/186 (61%), Gaps = 4/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  +I L+N + +M +TI      +  +RTG+ S ++LD V V  YGS +PLNQ++ +T 
Sbjct: 1   MTDLI-LKNAELQMRETIDAYVIHLRQIRTGKASGAILDKVMVNYYGSLMPLNQISQITT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP ++++  +D+ ++      IH+++LGLNP+ +  ++RIP+   TE+ R  LVK  H 
Sbjct: 60  PEPNLIIIKPYDRNVITEAVGAIHKADLGLNPVSDATLIRIPIAPLTEDVRKNLVKKVHK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  KI +RNIRRD +D +KK       S+D+++  E+ IQ+ITD  IK +D   +EK+
Sbjct: 120 ELEGYKIRIRNIRRDAIDEIKKIE---NISKDLISDNEDQIQQITDKFIKQLDDLTKEKE 176

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 177 KELMTI 182


>gi|323341770|ref|ZP_08082003.1| ribosome recycling factor [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464195|gb|EFY09388.1| ribosome recycling factor [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 181

 Score =  196 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 65/173 (37%), Positives = 98/173 (56%), Gaps = 3/173 (1%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M + I   +  +  LR+GR + SML  V ++ YGS  P+ Q+A ++V+E R LV+  +D 
Sbjct: 12  MDEVIENFETRLGGLRSGRANVSMLYGVSIDYYGSATPIEQIAQISVVEGRQLVIKPFDP 71

Query: 74  EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIR 133
             +  +E  I+  NLGL    +G V+RI VP+ TEE R  + K   + AE +K++ RN+R
Sbjct: 72  SALKEIEHTINNGNLGLLAQNDGTVVRINVPQLTEETRKEVSKQVGSLAEDAKVAARNVR 131

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RD  D +K         ED    L +D+QK+TD   K ID+  ++K KEIM  
Sbjct: 132 RDLNDEIKNLE---DLPEDQEKRLLDDVQKLTDDITKKIDAISKDKVKEIMTI 181


>gi|219685407|ref|ZP_03540226.1| ribosome recycling factor [Borrelia garinii Far04]
 gi|219673180|gb|EED30200.1| ribosome recycling factor [Borrelia garinii Far04]
          Length = 184

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/177 (37%), Positives = 109/177 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  TLRTGR+S ++ D + ++ +G   P+ QV+++ + E R++V+ 
Sbjct: 8   LDEKMSKVLLSLDNEYKTLRTGRISSNVFDKIFIQYHGQKTPITQVSSIRIPEARLVVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  S+L +NP+ +G V+RI VP  T ERR  +VK A   AE+ K+S 
Sbjct: 68  PWDKTILNKIEQAILNSDLSMNPLSDGSVIRIKVPALTNERRQDIVKHAKKIAEEHKVST 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIR+D  + +KK  K  + +ED +  + +DIQK  D  IK ID+  E K +EIM  
Sbjct: 128 RNIRQDLNNKVKKQEKESEITEDNLKRILDDIQKSIDIYIKRIDTILESKIQEIMEV 184


>gi|262277277|ref|ZP_06055070.1| ribosome recycling factor [alpha proteobacterium HIMB114]
 gi|262224380|gb|EEY74839.1| ribosome recycling factor [alpha proteobacterium HIMB114]
          Length = 186

 Score =  196 bits (499), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 82/162 (50%), Positives = 112/162 (69%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + +M D+I  L KD+ T+RTGR   SMLDLVKVE YG  +P+NQVA +TV +P+ +
Sbjct: 7   LKSFEKKMEDSIVSLGKDLSTVRTGRAHSSMLDLVKVEVYGQSMPINQVATITVTDPQTI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            + VWD   V   E+ I ES+L LNP+++GQ+LRIPVP+  E+RR  L K+ +  +EK K
Sbjct: 67  SIQVWDANNVKFCEKAIRESDLNLNPVIDGQLLRIPVPKLNEDRRKELSKIVNQQSEKIK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST 168
           IS+RN+RR GMD LKK  K+   SED    L N++QKITD  
Sbjct: 127 ISIRNVRRTGMDFLKKEEKNKNISEDESKKLSNELQKITDDF 168


>gi|213029166|ref|ZP_03343613.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 136

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/135 (43%), Positives = 86/135 (63%)

Query: 22  KKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVER 81
           +  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++V+D+ M  +VE+
Sbjct: 2   QTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEK 61

Query: 82  GIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLK 141
            I  S+LGLNP   G  +R+P+P  TEERR  L K+    AE+++++VRN+RRD  D +K
Sbjct: 62  AIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVK 121

Query: 142 KSRKSGKASEDMVAS 156
              K    SED    
Sbjct: 122 ALLKDKAISEDDDRR 136


>gi|168705204|ref|ZP_02737481.1| Ribosome recycling factor [Gemmata obscuriglobus UQM 2246]
          Length = 186

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 58/179 (32%), Positives = 101/179 (56%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ +DRM   +   + D+  +RTGR SP MLD ++V+ YG+  P+  VA+VT  +   +
Sbjct: 7   LKDTEDRMEKALDVFRNDLKGMRTGRASPQMLDSLRVDNYGTMSPIRDVASVTCPDAATI 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  +  E +  +E+ I  S+LGL P  +G+V+R+ +P  + ++R  +V      AE +K
Sbjct: 67  VIKPYAAESLKEIEKAIRSSDLGLAPNNDGKVIRLTMPAMSGDQRKKIVAAVKKSAESAK 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +S RNIRRDG  H + + K+   +ED     +  +Q +       ID    +K+KE++ 
Sbjct: 127 VSCRNIRRDGNKHFEDAEKAKTMTEDDRDKGKAKVQDLLKVYEGKIDDLANKKEKEVLE 185


>gi|42520392|ref|NP_966307.1| ribosome recycling factor [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|47116999|sp|P61311|RRF_WOLPM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|42410130|gb|AAS14241.1| ribosome recycling factor [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 185

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 77/185 (41%), Positives = 116/185 (62%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++      K+RM  TI     D+  +RTGR S S+LD + V  YG H  LNQVA V+V
Sbjct: 2   LNEI--KAKTKERMLKTIQSFHDDIKGVRTGRASASLLDGIVVNIYGGHQKLNQVAGVSV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           ++ + L + VWD  +V  V+  I  +NL LNP+VEG  +RI +P+ T+E R  LVK+ H 
Sbjct: 60  IDNKTLSIKVWDISVVGEVKNAILNANLNLNPVVEGSTIRIALPDLTQETREKLVKLLHQ 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           +AE ++I++RNIRRD M+  +K +++ + SED     + +IQ ITD  IK ID     K+
Sbjct: 120 FAENARIAIRNIRRDIMEETEKMKENKEISEDDFHGAKKEIQNITDDNIKKIDGELSIKE 179

Query: 181 KEIMH 185
           K+I++
Sbjct: 180 KDILN 184


>gi|224534946|ref|ZP_03675515.1| ribosome recycling factor [Borrelia spielmanii A14S]
 gi|224513886|gb|EEF84211.1| ribosome recycling factor [Borrelia spielmanii A14S]
          Length = 184

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 67/177 (37%), Positives = 108/177 (61%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           + ++M   +  L  +  TLRTGR++ ++ D + +  +G   P+ QV+++ + E R++V+ 
Sbjct: 8   LDEKMSKVLLSLDNEYKTLRTGRINSNIFDKIYINYHGQRTPITQVSSIRIPEARLVVIQ 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            WDK ++  +E+ I  S+L +NP  +G V+RI VP  T ERR  +VK A   AE+ KIS 
Sbjct: 68  PWDKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKIST 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIR++  + +KK  K  + +ED +  + +DIQK TD  IK ID+  E K +EIM  
Sbjct: 128 RNIRQELKNKVKKQEKESEITEDSLKRILDDIQKSTDLCIKRIDTILESKIQEIMEV 184


>gi|313665273|ref|YP_004047144.1| ribosome recycling factor [Mycoplasma leachii PG50]
 gi|312949294|gb|ADR23890.1| ribosome recycling factor [Mycoplasma leachii PG50]
          Length = 182

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 71/186 (38%), Positives = 115/186 (61%), Gaps = 4/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  +I L+N + +M +TI      +  +RTG+ S ++LD V V  YGS +PLNQ++ +T 
Sbjct: 1   MTDLI-LKNAELQMKETIDAYVIHLRQIRTGKASGAILDKVMVNYYGSLMPLNQISQITT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP ++++  +D+ ++      IH+++LGLNP+ +  ++RIP+   TE+ R  LVK  H 
Sbjct: 60  PEPNLIIIKPYDRNVITEAVGAIHKADLGLNPVSDATLIRIPIAPLTEDVRKNLVKKVHK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  KI +RNIRRD +D +KK       S+D+++  E+ IQ+ITD  IK +D   +EK+
Sbjct: 120 ELEGYKIRIRNIRRDAIDEIKKIE---NISKDLISDNEDKIQQITDKFIKQLDDLTKEKE 176

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 177 KELMKI 182


>gi|147840489|emb|CAN68423.1| hypothetical protein VITISV_018268 [Vitis vinifera]
          Length = 258

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 2/178 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N   +M   +  L +++  LRTGR S  MLD + VE  G  +PL+++A V+VL+P+ L 
Sbjct: 82  ENAMSQMDAAVVALSRELSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLS 141

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +D + +  +E  I  S LGLNP  +G+ L   +P  T+E   A+ KV     E  K 
Sbjct: 142 VTPYDLDALKQLENAIVSSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQ 201

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           S+R  R+  +D +KK+       +D+   LE ++ ++T   +K+ +   + K+KEI  
Sbjct: 202 SIRRARQKALDXIKKA--GSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEIAE 257


>gi|225452150|ref|XP_002263449.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296090242|emb|CBI40061.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 2/178 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +N   +M   +  L +++  LRTGR S  MLD + VE  G  +PL+++A V+VL+P+ L 
Sbjct: 82  ENAMSQMDAAVVALSRELSKLRTGRASAGMLDHIIVETGGVKMPLSRLAVVSVLDPKTLS 141

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +D + +  +E  I  S LGLNP  +G+ L   +P  T+E   A+ KV     E  K 
Sbjct: 142 VTPYDLDALKQLENAIVSSPLGLNPKADGERLIAVIPPLTKEHIQAMCKVVAKSCEDVKQ 201

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           S+R  R+  +D +KK+       +D+   LE ++ ++T   +K+ +   + K+KEI  
Sbjct: 202 SIRRARQKALDMIKKA--GSSLPKDVAKRLEKEVDELTKKFVKSAEDMCKAKEKEIAE 257


>gi|255071971|ref|XP_002499660.1| ribosome recycling factor [Micromonas sp. RCC299]
 gi|226514922|gb|ACO60918.1| ribosome recycling factor [Micromonas sp. RCC299]
          Length = 299

 Score =  194 bits (495), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 98/180 (54%), Gaps = 4/180 (2%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D    +  M   I  L++D+  LRTGR SP ML+ + V+AYG H PL  + +VT   P+
Sbjct: 122 FDPAAFEQLMESAIEALERDLGKLRTGRASPGMLENLVVQAYGDHTPLQHLGSVTARNPQ 181

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L V ++D  + A+V   I +S LG NP  +G  L +PVPE   + +  + K+A    E 
Sbjct: 182 TLAVMLYDASLKAAVAAAIRDSPLGFNPREDGDTLVVPVPEMNADVKREVAKMAAKAGET 241

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +KISVRN R+ GMD +K+++      ED     E ++QK  D+ +K        K+K IM
Sbjct: 242 AKISVRNARKKGMDAIKRAK----MPEDEAKRAEKEVQKSHDAFVKRCQDLTVAKEKAIM 297


>gi|330968958|gb|EGH69024.1| ribosome recycling factor [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 161

 Score =  194 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 62/162 (38%), Positives = 94/162 (58%), Gaps = 2/162 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   ++ + RM  ++  L      +RTG+  PS+L  V V  YG+  PL+QVANVTV
Sbjct: 2   INEI--KKDAQTRMQKSLESLTHAFTRIRTGKAHPSILGGVMVPYYGADTPLSQVANVTV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L V  +++ M+A+V++ I  S LG NP   G++L I +P  TEE R    K A  
Sbjct: 60  KDSRTLQVVAFERNMLAAVDKAIQSSGLGFNPTNLGELLLISMPALTEETRKGFTKQARD 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
            AE ++++VRNIRRD +  LK   K  + SED      +D+Q
Sbjct: 120 AAEDARVAVRNIRRDALSQLKDLVKEKEISEDEERRAADDVQ 161


>gi|326532442|dbj|BAK05150.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 260

 Score =  194 bits (493), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 2/174 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
              +M   +  L +++  LRTGR SP MLD + VE     V L+++A V+VL+   L V 
Sbjct: 86  ATAQMDTAVVALSRELSKLRTGRASPGMLDHIMVETGDVKVGLSRIAVVSVLDSHTLSVM 145

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D   + S+E  I  S LG+NP  +G  +   VP  T+E   A+ KV    AE  K S+
Sbjct: 146 PYDPNTMKSIENAIASSPLGINPTPDGSRIIAAVPPLTKETMQAMCKVVTKSAEDFKQSI 205

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R  R+  +D +KKS  S    +D +  LE +++++T   IK+ D   + K+KEI
Sbjct: 206 RRARQKALDTIKKS--SSSMPKDDIKRLEKEVEELTKKFIKSADDMCKAKEKEI 257


>gi|71892056|ref|YP_277786.1| ribosome recycling factor [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|123641045|sp|Q493C9|RRF_BLOPB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|71796162|gb|AAZ40913.1| ribosome recycling factor [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 188

 Score =  194 bits (493), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 71/187 (37%), Positives = 115/187 (61%), Gaps = 1/187 (0%)

Query: 1   MNQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           +N++ ++Q + +  M   I   K ++  +  GR+SP++L+ ++V+ YG   PL+QVAN  
Sbjct: 2   INKIDNIQTDSEIHMKKCIKNFKTNINNIHIGRISPNILNNIRVDYYGISTPLSQVANAI 61

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           V + R L ++V+D +++ S E+ I  S+L L PI  G  +R+ +P  TEERR  L+K+  
Sbjct: 62  VEDSRTLAITVFDHQLIKSTEKAIFMSDLELIPISYGNTIRVTLPALTEERRHTLIKMVR 121

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             AEKSKI+VR++RR   D  K   K+ + +ED     +N+IQK+T+  IK ID    EK
Sbjct: 122 TEAEKSKIAVRSVRRIANDKTKILLKNKEINEDEEHFFQNEIQKLTNIWIKEIDIILAEK 181

Query: 180 KKEIMHF 186
           + E+M F
Sbjct: 182 ESELMKF 188


>gi|297891|emb|CAA51077.1| nuclear located protein [Daucus carota]
          Length = 167

 Score =  194 bits (493), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 61/155 (39%), Positives = 96/155 (61%)

Query: 32  RVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLN 91
           R +P MLD +KVE YG+   L  +A ++  +   L+V+ +DK  +  +E+ I  S+LG+ 
Sbjct: 13  RSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLLVNPYDKSSLKDIEKAIVNSDLGIT 72

Query: 92  PIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASE 151
           P  +G V+R+ +P+ T +RR  L K+    AE+ K+++RNIRRD +    K  K  K SE
Sbjct: 73  PNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVALRNIRRDAIKSYDKLEKEKKLSE 132

Query: 152 DMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           D V  L +D+QK+ D  IK +DS F++K+KE+M  
Sbjct: 133 DNVKDLSSDLQKVIDEYIKKVDSIFKQKEKELMTV 167


>gi|83319658|ref|YP_424359.1| ribosome recycling factor [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|123535777|sp|Q2SSA4|RRF_MYCCT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|83283544|gb|ABC01476.1| ribosome recycling factor [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 182

 Score =  194 bits (493), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 71/186 (38%), Positives = 115/186 (61%), Gaps = 4/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M  +I L+N + +M +TI      +  +RTG+ S ++LD V V  YGS +PLNQ++ +T 
Sbjct: 1   MTDLI-LKNAELQMKETIDAYVIHLRQIRTGKASGAILDKVMVNYYGSLMPLNQISQITT 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP ++++  +D+ ++      IH+++LGLNPI +  ++RIP+   TE+ R  LVK  H 
Sbjct: 60  PEPNLIIIKPYDRNVITEAVGAIHKADLGLNPISDATLIRIPIAPLTEDVRKNLVKKVHK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E  KI +RNIRRD +D +KK       S+D+++  E+ IQ+ITD  IK +D   +EK+
Sbjct: 120 ELEGYKIRIRNIRRDAIDEIKKVE---NISKDLISDNEDKIQQITDKFIKQLDDLTKEKE 176

Query: 181 KEIMHF 186
           +E+M  
Sbjct: 177 RELMTI 182


>gi|225677380|ref|ZP_03788350.1| ribosome releasing factor [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590588|gb|EEH11845.1| ribosome releasing factor [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 185

 Score =  193 bits (492), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 76/185 (41%), Positives = 116/185 (62%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++      K+RM  TI     D+  +RTGR S S+LD + V  YG H  LNQVA V+V
Sbjct: 2   LNEI--KAKTKERMLKTIQSFHDDIKGVRTGRASASLLDGIVVNIYGGHQKLNQVAGVSV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           ++ + L + +WD  +V  V+  I  +NL LNP+VEG  +RI +P+ T+E R  LVK+ H 
Sbjct: 60  IDNKTLSIKIWDINVVGEVKNAILNANLNLNPVVEGNTIRIALPDLTQETREKLVKLLHQ 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           +AE ++I++RNIRRD M+  +K +++ + SED     + +IQ ITD  IK ID     K+
Sbjct: 120 FAENARIAIRNIRRDIMEETEKMKENKEISEDDFHGAKKEIQNITDDNIKKIDGELSIKE 179

Query: 181 KEIMH 185
           K+I++
Sbjct: 180 KDILN 184


>gi|33519739|ref|NP_878571.1| ribosome recycling factor [Candidatus Blochmannia floridanus]
 gi|39932111|sp|Q7VRE3|RRF_BLOFL RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|33504084|emb|CAD83345.1| ribosome recycling factor [Candidatus Blochmannia floridanus]
          Length = 188

 Score =  193 bits (492), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 69/188 (36%), Positives = 111/188 (59%), Gaps = 2/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M+ +ID   +++   M   I   K ++  +  GR+SP +L  +K+E YG   PL Q+ N 
Sbjct: 1   MSDIIDDFQKDVTINMQKCIDNFKININKIHVGRISPDILSFIKIEYYGVITPLCQLTNT 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
            V +PR L+++V+D  M+  +E+ I ESNLG  P+  G  +R+  P  TE RR +L+K+ 
Sbjct: 61  VVEQPRTLIITVFDSSMIKFIEKAILESNLGCTPVSTGNTIRVTFPTLTESRRYSLIKMV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            + +EKSK+ +RNIRR   D LK   ++ + ++D     +N+IQ +TD  IK I    +E
Sbjct: 121 RSESEKSKVLIRNIRRVSNDKLKTFLRNKEINKDNEHYFQNEIQNLTDIWIKKIILITKE 180

Query: 179 KKKEIMHF 186
           K+ E+M F
Sbjct: 181 KELELMKF 188


>gi|153820605|ref|ZP_01973272.1| ribosome recycling factor [Vibrio cholerae NCTC 8457]
 gi|126508852|gb|EAZ71446.1| ribosome recycling factor [Vibrio cholerae NCTC 8457]
          Length = 148

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 61/147 (41%), Positives = 95/147 (64%), Gaps = 2/147 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PLNQVANV  
Sbjct: 2   INEI--KKDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVIA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L ++V+D+E+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+   
Sbjct: 60  EDARTLAITVFDRELTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRG 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSG 147
            AE  +++VRNIRRD  + LK   K+ 
Sbjct: 120 EAEGGRVAVRNIRRDANNDLKALLKTK 146


>gi|171920586|ref|ZP_02695872.2| ribosome recycling factor [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185179028|ref|ZP_02555297.2| ribosome recycling factor [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024068|ref|ZP_02569849.2| ribosome recycling factor [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518344|ref|ZP_02556270.2| ribosome recycling factor [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524301|ref|ZP_02557887.2| ribosome recycling factor [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867937|ref|ZP_03079935.1| ribosome recycling factor [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273305|ref|ZP_03205841.1| ribosome recycling factor [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|225550912|ref|ZP_03771861.1| ribosome recycling factor [Ureaplasma urealyticum serovar 2 str.
           ATCC 27814]
 gi|225551642|ref|ZP_03772588.1| ribosome recycling factor [Ureaplasma urealyticum serovar 8 str.
           ATCC 27618]
 gi|171903292|gb|EDT49581.1| ribosome recycling factor [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209122|gb|EDU06165.1| ribosome recycling factor [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188019107|gb|EDU57147.1| ribosome recycling factor [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997968|gb|EDU67065.1| ribosome recycling factor [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659871|gb|EDX53251.1| ribosome recycling factor [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660414|gb|EDX53673.1| ribosome recycling factor [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249825|gb|EDY74605.1| ribosome recycling factor [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|225379457|gb|EEH01822.1| ribosome recycling factor [Ureaplasma urealyticum serovar 8 str.
           ATCC 27618]
 gi|225380066|gb|EEH02428.1| ribosome recycling factor [Ureaplasma urealyticum serovar 2 str.
           ATCC 27814]
          Length = 183

 Score =  193 bits (492), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 63/186 (33%), Positives = 103/186 (55%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN  I    I++     + ++  + + LRTGR +P++LD + V+ YGS  P+NQ+AN++V
Sbjct: 1   MNFKIYETKIREEFELVLKWMHNEFIKLRTGRATPAILDGILVDYYGSMTPINQLANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L +  +D+  +  V   I+ SNLG+NP V+  ++R+     TEE R  L K A  
Sbjct: 61  PEPRVLAIKPYDRSSIKDVASAINASNLGVNPQVDVDIIRLTFAAPTEEVRKNLAKKAKQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++KI VR+IR++  D  K   K     ED     + ++  +T    K I++    K+
Sbjct: 121 VGEEAKIRVRHIRQEAQDLFK---KDSSTVEDDKKFFQTELDNLTKELNKEIEAVVSHKE 177

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 178 KDIMTV 183


>gi|332832790|ref|XP_520237.3| PREDICTED: ribosome-recycling factor, mitochondrial isoform 7 [Pan
           troglodytes]
          Length = 336

 Score =  193 bits (491), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 154 EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 213

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 214 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQ 273

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+     SED +  +E  I ++ D T+  +D     K 
Sbjct: 274 NTNKAKDSLRKVRTNSMNKLKKSK--YTVSEDTIRLIEKQISQMADDTVAELDRHLAVKT 331

Query: 181 KEIM 184
           KE++
Sbjct: 332 KELL 335


>gi|189219823|ref|YP_001940464.1| Ribosome recycling factor [Methylacidiphilum infernorum V4]
 gi|238692086|sp|B3DXF7|RRF_METI4 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189186681|gb|ACD83866.1| Ribosome recycling factor [Methylacidiphilum infernorum V4]
          Length = 186

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 67/180 (37%), Positives = 112/180 (62%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   +++M   +   ++++ +LR+G+  P +L  V VEAY +H+ L  +A +T  +  +L
Sbjct: 7   LLEAEEKMEKAVEKTRQELASLRSGKAHPEILSNVSVEAYETHMKLKDLAAITAPDANLL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  WD  +V S+ + I ES LGLNPIV+ +++RIP+P  +EERRL L++VA   +E+ +
Sbjct: 67  IVQPWDLTLVDSIRKAIEESKLGLNPIVDAKLIRIPIPPLSEERRLELIRVARKISEEGR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +R +RR  ++ LKK  K    SED +   E +IQK+TD  I+ ID     K+K++M  
Sbjct: 127 VGIRAVRRHCLEELKKLEKEAHLSEDELERAEKEIQKLTDEYIEKIDRILAAKEKDLMKV 186


>gi|119607926|gb|EAW87520.1| mitochondrial ribosome recycling factor, isoform CRA_a [Homo
           sapiens]
 gi|119607929|gb|EAW87523.1| mitochondrial ribosome recycling factor, isoform CRA_a [Homo
           sapiens]
          Length = 336

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 154 EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 213

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 214 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQ 273

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K 
Sbjct: 274 NTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKT 331

Query: 181 KEIM 184
           KE++
Sbjct: 332 KELL 335


>gi|297270213|ref|XP_001089220.2| PREDICTED: ribosome-recycling factor, mitochondrial isoform 1
           [Macaca mulatta]
          Length = 336

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ+  +++ 
Sbjct: 154 EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQIGQISMK 213

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 214 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGMLIRVPIPQVTREHRETLVKLAKQ 273

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K 
Sbjct: 274 NTNKAKDSLRKVRTNAMNKLKKSKDT--VSEDTIRLVEKQISQMADDTVAELDRHLAVKT 331

Query: 181 KEIM 184
           KE++
Sbjct: 332 KELL 335


>gi|58698901|ref|ZP_00373766.1| ribosome recycling factor [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630154|ref|YP_002726945.1| ribosome releasing factor [Wolbachia sp. wRi]
 gi|254809543|sp|C0R2L2|RRF_WOLWR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|58534582|gb|EAL58716.1| ribosome recycling factor [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592135|gb|ACN95154.1| ribosome releasing factor [Wolbachia sp. wRi]
          Length = 185

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 76/185 (41%), Positives = 117/185 (63%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++      K+RM  TI     D+  +RTGR S S+LD + V  YG H  LNQVA V+V
Sbjct: 2   LNEI--KAKTKERMLKTIQSFHDDIKGVRTGRASASLLDGIVVNIYGGHQKLNQVAGVSV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           ++ + L + +WD  +V  V+  I  +NL LNP+VEG  +RI +P+ T+E R  LVK+ H 
Sbjct: 60  IDNKTLSIKIWDINVVGEVKNAILNANLNLNPVVEGNTIRIALPDLTQETREKLVKLLHQ 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           +AE ++I++RNIRRD M+  +K +++ + SED     + +IQ ITD+ IK ID     K+
Sbjct: 120 FAENARIAIRNIRRDIMEETEKMKENKEISEDDFHGAKKEIQNITDNNIKKIDGELSIKE 179

Query: 181 KEIMH 185
           K+I++
Sbjct: 180 KDILN 184


>gi|149738437|ref|XP_001501480.1| PREDICTED: similar to mitochondrial ribosome recycling factor
           [Equus caballus]
          Length = 336

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 60/184 (32%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ + + M   +  LK +       R SP  LD + V      + LNQ+  +++ 
Sbjct: 154 EDIISLEEVDEEMKSVMEALKDNFNKTVNIRTSPGSLDHITVVTADGKLALNQIGQISMK 213

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 214 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQ 273

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+   KASED +  +E  I ++ D T+  +D +   K 
Sbjct: 274 NTNKAKDSLRKVRTNAMNKLKKSK--DKASEDTIRLIEKQISQMADDTVAELDRYLAVKT 331

Query: 181 KEIM 184
           KE++
Sbjct: 332 KELL 335


>gi|88607028|ref|YP_504740.1| ribosome recycling factor [Anaplasma phagocytophilum HZ]
 gi|88598091|gb|ABD43561.1| ribosome recycling factor [Anaplasma phagocytophilum HZ]
          Length = 184

 Score =  193 bits (491), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 71/175 (40%), Positives = 108/175 (61%), Gaps = 1/175 (0%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            ++RM  T +    D+  +RTGRVS S+LD + V  YG+ V LN V++++V   R L+VS
Sbjct: 10  AQERMDKTYAMFLNDISGIRTGRVSASLLDGISVSYYGNKVKLNTVSSISV-NGRTLLVS 68

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           +WD  ++  V+  I  SN+G     E   +R+ VPE T + R  LVK+ +  AE+SK+S+
Sbjct: 69  LWDASILGEVKSAIEASNMGFGMTCESSTVRLVVPELTNDVRKNLVKMLNKLAEESKVSI 128

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRRD ++ LK  + + + SED +  +  +IQKITDS IK I   +  K+ EI+
Sbjct: 129 RNIRRDAIERLKSLQDNKEISEDDMHGVSAEIQKITDSFIKKIADAYTSKESEIL 183


>gi|332229921|ref|XP_003264135.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 1
           [Nomascus leucogenys]
          Length = 336

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 154 EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 213

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 214 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQ 273

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K 
Sbjct: 274 NTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKT 331

Query: 181 KEIM 184
           KE++
Sbjct: 332 KELL 335


>gi|212551111|ref|YP_002309428.1| ribosome recycling factor [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549349|dbj|BAG84017.1| ribosome recycling factor [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 184

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 111/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +++ + +M  T++ L++ +  +R G+ S  +LD +K+E YG+ VPL+ VAN+++L+ + +
Sbjct: 5   MEHSEKKMLHTLTHLEEVLSRIRAGKASTHILDGIKIEYYGNVVPLSNVANISILDAKTI 64

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  W+K M+  +E+ I +S++G+ P   G+++R+ +P  TEERR  LVK +    EK+K
Sbjct: 65  TILAWEKAMMKPIEKAIQDSDIGITPENNGELVRLNIPPLTEERRKQLVKQSKGEVEKAK 124

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +RNIRR+  D +KK  K G  SED     E   QK+ D  +K ID     K K+IM  
Sbjct: 125 VGIRNIRRETNDMIKKFVKEGIFSEDEGKKTELATQKLHDKFLKKIDKVLIAKVKDIMTV 184


>gi|209554340|ref|YP_002284960.1| ribosome recycling factor [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|226749944|sp|B5ZC20|RRF_UREU1 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|209541841|gb|ACI60070.1| ribosome recycling factor [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
          Length = 183

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN  I    I++     + ++  + + LRTGR +P++LD + V+ YGS  P+NQ+AN++V
Sbjct: 1   MNFKIYETKIREEFELVLKWMHNEFIKLRTGRATPAILDGILVDYYGSMTPINQLANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L +  +D+  +  V   I+ SNLG+NP V+  ++R+     TEE R  L K A  
Sbjct: 61  PEPRVLAIKPYDRSSIKDVASAINASNLGVNPQVDVDIIRLTFAAPTEEVRKNLAKKAKQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++KI VR+IR++  D  K   K+    ED     + ++  +T    K I++    K+
Sbjct: 121 VGEEAKIRVRHIRQEAQDLFK---KNSSTVEDDKKFFQTELDNLTKELNKEIEAVVSHKE 177

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 178 KDIMTV 183


>gi|168031675|ref|XP_001768346.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680524|gb|EDQ66960.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 192

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 64/177 (36%), Positives = 100/177 (56%), Gaps = 4/177 (2%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +     M   ++ L  ++  LRTGR +P MLD V V ++G   PL+ VA V+V     L 
Sbjct: 17  ETASRLMEAALNALSVELSKLRTGRATPGMLDHVNVMSHGVQTPLSHVAAVSVSNLETLT 76

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +D  MV  VE+ I  S L LNP+ EG+VLR+P+P+ T+E    + K+     E +K+
Sbjct: 77  VMPYDTSMVKEVEKAIRNSPLKLNPMAEGEVLRVPIPKLTKEHIQTMSKLVGKAGETAKL 136

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           SVR  R+D MD + K    G  S+D V   E +++ +T   +K+++   + K+KEI+
Sbjct: 137 SVRRARKDAMDIISK----GGYSKDEVKRFEKEVEDVTKKYVKSVEEACKSKEKEIL 189


>gi|50345004|ref|NP_001002174.1| ribosome-recycling factor, mitochondrial [Danio rerio]
 gi|49256675|gb|AAH74048.1| Mitochondrial ribosome recycling factor [Danio rerio]
          Length = 257

 Score =  192 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 66/184 (35%), Positives = 109/184 (59%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ +K+ M   ++ LK D     + R SP  LD + V       PLNQ+  +++ 
Sbjct: 75  EDIISLEEVKEDMAAVLAALKDDFSRNLSVRTSPGALDHITVTTKDGKFPLNQLGQISMK 134

Query: 62  EPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++LVV++    E + +V R + ES++GLNP VEG ++R+PVP+ T E R  LVK+A  
Sbjct: 135 SPQLLVVNMTGFPEAMVAVTRALRESSMGLNPEVEGTIIRVPVPKVTREHRENLVKLAKQ 194

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           ++ KSK S+R +R + +  +KKS+ +   S+D +  +E  IQ++TDS   +ID     K 
Sbjct: 195 FSNKSKDSLRRVRSNAISQVKKSKDA--VSDDTIHLIEKQIQQMTDSFTADIDKQLATKT 252

Query: 181 KEIM 184
           KE++
Sbjct: 253 KELL 256


>gi|226508144|ref|NP_001149112.1| LOC100282734 [Zea mays]
 gi|195624822|gb|ACG34241.1| ribosome recycling factor [Zea mays]
 gi|238015350|gb|ACR38710.1| unknown [Zea mays]
          Length = 259

 Score =  192 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 2/174 (1%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
              +M   +  L +++  LRTGR +P MLD + VE     V LN++A V+VL+   L V 
Sbjct: 85  ATAQMDAAVIALSRELSKLRTGRATPGMLDHIMVENADVKVALNRIAVVSVLDAHTLSVM 144

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D   + S+E  I  S LG+NP  +G  +   +P  T+E   AL KV    AE  K S+
Sbjct: 145 PYDPTSMKSIEHAIISSPLGINPTPDGNRIIAAIPPLTKENIQALCKVVTKSAEDFKQSI 204

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           R  R+  +D +KKS  +    +D V  +E +I+++T   IK+ D   + K+KEI
Sbjct: 205 RRARQKALDTIKKS--ASSMPKDDVKRIEKEIEELTKKFIKSSDDMCKAKEKEI 256


>gi|309389219|gb|ADO77099.1| ribosome recycling factor [Halanaerobium praevalens DSM 2228]
          Length = 185

 Score =  192 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 107/180 (59%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   + +M   +   K+D+ T+RTGR  PS++  +K   YG   P+ Q+A V   E R +
Sbjct: 6   MNETEKKMEKGLEKTKEDLNTIRTGRARPSLVQNIKANNYGVATPIQQMAKVFAPEARQI 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+  WDK  + ++E+ I + NLGL P  +G V+RI +P+ TEERR  LVK+ H  AEK +
Sbjct: 66  VIEPWDKNNIETIEKAIMQENLGLTPSNDGSVIRINIPQLTEERRKELVKILHEKAEKGR 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++R IRR+  + L+     G+ SED +     ++Q++TD  I  +D   ++K++EIM  
Sbjct: 126 IAIRAIRREANEELELLEDEGEISEDNMHRGLENVQELTDEYIDKLDQIVKKKEEEIMEV 185


>gi|73667372|ref|YP_303388.1| ribosome recycling factor [Ehrlichia canis str. Jake]
 gi|123614722|sp|Q3YR65|RRF_EHRCJ RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|72394513|gb|AAZ68790.1| ribosome recycling factor [Ehrlichia canis str. Jake]
          Length = 185

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 69/179 (38%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K+RM  T+S    D+  +RTGR   S+LD + VE YG  V LN +++++V + + L+
Sbjct: 7   QDAKNRMEKTLSVYLSDIDGIRTGRARTSVLDGIVVETYGGRVKLNTISSISVSDNKTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           + VWD   + +++  I  SNLG     E   +R+ VPE T++ R  LVK+    +E  ++
Sbjct: 67  IKVWDSNNIGAIKTAIMNSNLGFGFSCEATTIRLTVPEMTQDMRKNLVKLLGKISEDCRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           SVRNIRRD MD LK  + + + SED +     +IQKITD  +K I+  F  K+KE++  
Sbjct: 127 SVRNIRRDIMDKLKVMQDNKEISEDDLRVSGTEIQKITDDVMKKINDAFSSKEKELLQV 185


>gi|50954908|ref|YP_062196.1| ribosome recycling factor [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|60390246|sp|Q6AEV4|RRF_LEIXX RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|50951390|gb|AAT89091.1| ribosome recycling factor [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 186

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 103/188 (54%), Gaps = 4/188 (2%)

Query: 1   MNQVID-LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M  + D + +   RM  T+   K+D  T+  GR +P++   V V+ YGS  PL Q+A + 
Sbjct: 1   MTVIADVISDASQRMSKTLEAAKEDFGTVSAGRANPALFQKVLVDYYGSPTPLAQLAGLQ 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESN-LGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
             E R+L+V+ +DK  +  +ER I     +  N   +G+++R+ +PE TE+RR   VK+ 
Sbjct: 61  NPEARVLIVTPYDKGALKEIERAIVTMPSMSANVGNDGEIVRVTLPELTEDRRKEFVKIV 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E +K+++RNIRR   D L   +  G+  +D VA  E +++ +T + +  +D   + 
Sbjct: 121 RGKGEDAKVAIRNIRRRAKDELDALK--GEVGDDEVARGEKELEALTRTNVDLVDEALKR 178

Query: 179 KKKEIMHF 186
           K+ E++  
Sbjct: 179 KEAELLEV 186


>gi|319760411|ref|YP_004124349.1| ribosome recycling factor [Candidatus Blochmannia vafer str. BVAF]
 gi|318039125|gb|ADV33675.1| ribosome recycling factor [Candidatus Blochmannia vafer str. BVAF]
          Length = 188

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 71/187 (37%), Positives = 117/187 (62%), Gaps = 1/187 (0%)

Query: 1   MNQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           +N++ ++Q ++K++M   I   K ++  +  G VSP+ML+ + VE YGS +PL+Q+ N  
Sbjct: 2   INEICEIQADLKEQMKKCIDSFKINVNKIHVGHVSPNMLNFITVEYYGSVIPLSQLTNSV 61

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           V +PR L ++V+D  M+ ++E+ I  +NLG  PI  G V+RI +P  TE+RR  L+K+  
Sbjct: 62  VEKPRTLAITVFDASMIKTIEKAILTANLGFTPIAHGNVIRITLPILTEDRRRTLIKMMR 121

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             +EKSKIS+RNIRR   D +K   K  + + D     +N+IQ +T+  +  I+   +EK
Sbjct: 122 IESEKSKISLRNIRRIANDKIKVFLKKKEINVDDEYHRQNEIQNLTNFWVNQINMILKEK 181

Query: 180 KKEIMHF 186
           + E+M F
Sbjct: 182 ELELMMF 188


>gi|269959131|ref|YP_003328920.1| ribosome recycling factor [Anaplasma centrale str. Israel]
 gi|269848962|gb|ACZ49606.1| ribosome recycling factor [Anaplasma centrale str. Israel]
          Length = 183

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 1/175 (0%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            K+RM  T S    D+  +RTGRVS S+LD V +  YG+ V LN VA+++V   R L++S
Sbjct: 9   AKERMEKTFSMFLSDISGIRTGRVSASLLDGVFLTYYGNKVRLNTVASISV-SGRTLLIS 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           +WD  ++  V+  I  SNLG     E   +R+ VPE T + R  LVK+     E+ K+SV
Sbjct: 68  LWDASVLGDVKAAIDASNLGFGMTCEATTIRLVVPELTSDVRKNLVKMLSKLTEEGKVSV 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRRD +D LK  + + + SED   S+  +IQK+TD+ IK I   F  K+ EI+
Sbjct: 128 RNIRRDTIDKLKSMQDNKEISEDDFHSVSAEIQKVTDTFIKKIGDAFSVKESEIL 182


>gi|160902092|ref|YP_001567673.1| ribosome recycling factor [Petrotoga mobilis SJ95]
 gi|190360246|sp|A9BJD6|RRF_PETMO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|160359736|gb|ABX31350.1| ribosome recycling factor [Petrotoga mobilis SJ95]
          Length = 187

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/178 (34%), Positives = 106/178 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  +++M  T+   + ++  +RTGR + ++ + +KV+ YG   P+NQVA ++V E R +V
Sbjct: 9   KEAEEKMKKTLEHFEDELKKVRTGRPTTAIFEDIKVDYYGMPTPINQVATLSVGEERTVV 68

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ WDK+M+  +E+ I+ SN G + I +G V+R+  P  T E R  LVK      E++K+
Sbjct: 69  ITPWDKKMLEPIEKAINSSNFGFHAINDGNVVRVSFPNPTIEERRKLVKAIKEMLEETKV 128

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++RNIRRD +  +K+ +  G  SED     E +IQ+I        +  F+ K+KEIM 
Sbjct: 129 ALRNIRRDDIKKVKEIKNEGSISEDEAKKFEEEIQEILKENEDEAEKIFQRKEKEIME 186


>gi|297685276|ref|XP_002820221.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Pongo
           abelii]
          Length = 336

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 154 EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 213

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 214 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQ 273

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K 
Sbjct: 274 NTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKT 331

Query: 181 KEIM 184
           KE++
Sbjct: 332 KELL 335


>gi|15834673|ref|NP_296432.1| ribosome recycling factor [Chlamydia muridarum Nigg]
 gi|270284838|ref|ZP_06194232.1| ribosome recycling factor [Chlamydia muridarum Nigg]
 gi|270288867|ref|ZP_06195169.1| ribosome recycling factor [Chlamydia muridarum Weiss]
 gi|301336218|ref|ZP_07224420.1| ribosome recycling factor [Chlamydia muridarum MopnTet14]
 gi|3122779|sp|P71148|RRF_CHLMU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|1518663|gb|AAB07072.1| ribosome-releasing factor [Chlamydia muridarum]
 gi|7190087|gb|AAF38937.1| ribosome recycling factor [Chlamydia muridarum Nigg]
          Length = 179

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K++   RTG+  P++++ V VE YG+ + L+ +A+++V + R L
Sbjct: 3   LTSAEKEMSGVLTFFQKEIRGFRTGKAHPALVETVTVEVYGTTMRLSDIASISVSDTRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGNVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +S+RNIRR   D LK   K    +ED V  LE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VSIRNIRRTCNDRLK---KDDSLTEDAVKGLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|171910236|ref|ZP_02925706.1| ribosome recycling factor [Verrucomicrobium spinosum DSM 4136]
          Length = 188

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 68/182 (37%), Positives = 111/182 (60%), Gaps = 2/182 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDL--VKVEAYGSHVPLNQVANVTVLEPR 64
           L   ++ M   + +   +   +RTG+ SP++++   + V +YGS++ L Q+A ++  EPR
Sbjct: 7   LLTSEENMTKAVEYAIHEFAAVRTGKASPALVENTDIWVNSYGSNMKLKQLAMISTPEPR 66

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ++ +  +D   +  +ERGI+ SNLGLNP VEG+V+R+PVPE + ERR  +VK     AE 
Sbjct: 67  LIRIEPFDPSTLKDIERGINASNLGLNPSVEGKVIRLPVPELSTERRQQMVKQVKGMAED 126

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++ VR +RR+ M+ LKK  K+G  +ED +   E ++Q  TD  I  ID     K+KEI+
Sbjct: 127 ARVRVRAVRRESMEELKKLEKAGTITEDDLHRGEKEVQAFTDKKIAEIDQHVVSKEKEIL 186

Query: 185 HF 186
             
Sbjct: 187 TV 188


>gi|56416455|ref|YP_153529.1| ribosome recycling factor [Anaplasma marginale str. St. Maries]
 gi|222474824|ref|YP_002563239.1| ribosome recycling factor (rrf) [Anaplasma marginale str. Florida]
 gi|254994684|ref|ZP_05276874.1| ribosome recycling factor [Anaplasma marginale str. Mississippi]
 gi|255002796|ref|ZP_05277760.1| ribosome recycling factor [Anaplasma marginale str. Puerto Rico]
 gi|255003930|ref|ZP_05278731.1| ribosome recycling factor [Anaplasma marginale str. Virginia]
 gi|56387687|gb|AAV86274.1| ribosome recycling factor [Anaplasma marginale str. St. Maries]
 gi|222418960|gb|ACM48983.1| ribosome recycling factor (rrf) [Anaplasma marginale str. Florida]
          Length = 183

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 73/175 (41%), Positives = 105/175 (60%), Gaps = 1/175 (0%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            ++RM  T S    D+  +RTGRVS S+LD V +  YG+ V LN VA+++V   R L++S
Sbjct: 9   ARERMEKTFSMFLSDISGIRTGRVSASLLDGVFLTYYGNKVRLNTVASISV-SGRTLLIS 67

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           +WD  ++  V+  I  SNLG     E   +R+ VPE T + R  LVK+     E+ K+SV
Sbjct: 68  LWDASVIGDVKAAIDASNLGFGMTCEATTIRLVVPELTSDVRKNLVKMLSKLTEEGKVSV 127

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RNIRRD +D LK  + + + SED   S+  +IQK+TD+ IK I   F  K+ EI+
Sbjct: 128 RNIRRDTIDKLKSMQDNKEISEDDFHSISAEIQKVTDTFIKKIGDAFSVKESEIL 182


>gi|13358076|ref|NP_078350.1| ribosome releasing factor [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762287|ref|YP_001752597.1| ribosome recycling factor [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|183508475|ref|ZP_02689468.2| ribosome recycling factor [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701607|ref|ZP_02553656.2| ribosome recycling factor [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|22001956|sp|Q9PPX7|RRF_UREPA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189044082|sp|B1AJF3|RRF_UREP2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|11277798|pir||F82882 ribosome releasing factor frr UU512 [similarity] - Ureaplasma
           urealyticum
 gi|6899513|gb|AAF30925.1|AE002149_10 ribosome releasing factor [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827864|gb|ACA33126.1| ribosome recycling factor [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|182675892|gb|EDT87797.1| ribosome recycling factor [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700837|gb|EDU19119.1| ribosome recycling factor [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 183

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN  I    I++     + ++  + + LRTGR +P++LD + V  YGS +P+NQ+AN++V
Sbjct: 1   MNFKIYETKIREEFELVLKWMHNEFIKLRTGRATPAILDGILVNYYGSMMPINQLANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L +  +D+  +  +   I+ SNLG+NP V+  ++R+     TEE R  LVK A  
Sbjct: 61  PEPRVLAIKPYDRSSIKDIATAINASNLGVNPQVDVDIIRLTFAAPTEEVRKNLVKKAKQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++KI VR+IR++  D  K   K     ED     + ++  +T    K I++    K+
Sbjct: 121 VGEEAKIRVRHIRQEAQDLFK---KDSTTIEDDKKFFQTELDNLTKELNKEIETVVSHKE 177

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 178 KDIMTV 183


>gi|88658452|ref|YP_507088.1| ribosome recycling factor [Ehrlichia chaffeensis str. Arkansas]
 gi|123493752|sp|Q2GHJ5|RRF_EHRCR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|88599909|gb|ABD45378.1| ribosome recycling factor [Ehrlichia chaffeensis str. Arkansas]
          Length = 185

 Score =  191 bits (486), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 67/179 (37%), Positives = 107/179 (59%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K RM  ++S    D+  +RTGR   S+L+ + VE YG  V LN +++V+V + + L+
Sbjct: 7   QDAKSRMEKSLSVYLSDIDGIRTGRARTSVLNGIVVETYGGRVKLNTISSVSVSDNKTLM 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           + VWD   + +++  I  SNLG     E   +R+ VP+ T++ R  LVK+    +E  ++
Sbjct: 67  IKVWDSNNIGAIKTAIMNSNLGFGISCEATTIRLTVPDMTQDMRKNLVKLLGKISEDCRV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD MD LK  + S + SED +     +IQKITD  +K ++  F  K+KE++H 
Sbjct: 127 SIRNIRRDIMDRLKVMQDSKEISEDDLRVAGVEIQKITDDIMKKVNDAFTSKEKELLHV 185


>gi|58337544|ref|YP_194129.1| ribosome recycling factor Rrf [Lactobacillus acidophilus NCFM]
 gi|58254861|gb|AAV43098.1| ribosome recycling factor Rrf [Lactobacillus acidophilus NCFM]
          Length = 164

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 59/153 (38%), Positives = 99/153 (64%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  +D MG +I   +K + ++R G  + ++LD V+VE YG+  PL Q+++VT+ EPR+L
Sbjct: 6   IKKAQDNMGKSIKVYQKKLASVRAGVANAALLDNVQVEYYGAPTPLTQMSSVTIPEPRVL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +D+  +  +E  +  SNLGL P  +G+V+R+ +P+ T ERR  + K    YAE++K
Sbjct: 66  LITPYDQNSLDDIEHALLASNLGLTPANDGKVIRLVIPQLTSERREEIAKEVGKYAEEAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN 159
           I+VRN+RR+ MD LKK  K+G  +ED       
Sbjct: 126 IAVRNVRREAMDSLKKEEKNGDITEDEQRKFRK 158


>gi|91201172|emb|CAJ74232.1| similar to ribosome recycling factor (ribosome releasing factor)
           (RRF) [Candidatus Kuenenia stuttgartiensis]
          Length = 186

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 58/179 (32%), Positives = 104/179 (58%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +  K +M   I+ L+ D+  +RTGR S  +++ ++VE YG+  PL Q+A ++  + + ++
Sbjct: 8   KETKAKMEKVIAHLQDDLKGIRTGRASTGLVENIRVEYYGNPSPLKQLAVISTPDAQSIL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D  +V+++E+ I +S++GLNP VE + LRI +P   EERR  L      + E +K+
Sbjct: 68  IKPYDTTIVSNIEKAIIQSDIGLNPSVEAKTLRIVIPPLNEERRKKLSVTVKDFGESTKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIR+D      K +K    +ED V   +++IQKI       ++   + K +EI+  
Sbjct: 128 SLRNIRQDSNKQADKEKKENILTEDDVKRTKDEIQKIIKDFETKVNDLIKRKTEEILKV 186


>gi|255349066|ref|ZP_05381073.1| ribosome recycling factor [Chlamydia trachomatis 70]
 gi|255503604|ref|ZP_05381994.1| ribosome recycling factor [Chlamydia trachomatis 70s]
          Length = 179

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    RTG+  P++++ V VE YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMSGVLTFFQKETRGFRTGKAHPALVETVTVEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDNLTEDAVKSLEKKIQELTDKFCKQIEELTKQKEAEL 176


>gi|184158417|ref|YP_001846756.1| ribosome recycling factor [Acinetobacter baumannii ACICU]
 gi|183210011|gb|ACC57409.1| Ribosome recycling factor [Acinetobacter baumannii ACICU]
          Length = 163

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 67/156 (42%), Positives = 100/156 (64%), Gaps = 1/156 (0%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ + RM  T+  L++    +RTGR  PS+L+ V V  YGS VPLNQVANV V + R L+
Sbjct: 7   KDSEQRMLKTLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVEDSRTLI 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V  +++ MVA++++ I ES+LGLNPI     +R+P+P  TEE R  + K+A + AE +K+
Sbjct: 67  VQPFERTMVAAIDKAIRESDLGLNPITA-DSIRVPLPALTEETRRDMQKIARSEAENAKV 125

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQK 163
           ++RNIRRD +  +K   K  + SED      +DI K
Sbjct: 126 AIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIPK 161


>gi|255507284|ref|ZP_05382923.1| ribosome recycling factor [Chlamydia trachomatis D(s)2923]
 gi|289525721|emb|CBJ15202.1| ribosome recycling factor [Chlamydia trachomatis Sweden2]
 gi|296435291|gb|ADH17469.1| ribosome recycling factor [Chlamydia trachomatis E/150]
 gi|296439009|gb|ADH21162.1| ribosome recycling factor [Chlamydia trachomatis E/11023]
          Length = 179

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    RTG+  P++++ V VE YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMSGVLTFFQKETRGFRTGKAHPALVETVTVEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDSLTEDAVKSLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|171920233|ref|ZP_02690622.2| ribosome recycling factor [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|171902628|gb|EDT48917.1| ribosome recycling factor [Ureaplasma parvum serovar 1 str. ATCC
           27813]
          Length = 183

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN  I    I++     + ++  + + LRTGR +P++LD + V  YGS +P+NQ+AN++V
Sbjct: 1   MNFKIYETKIREEFELVLKWMHNEFIKLRTGRATPTILDGILVNYYGSMMPINQLANISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPR+L +  +D+  +  +   I+ SNLG+NP V+  ++R+     TEE R  LVK A  
Sbjct: 61  PEPRVLAIKPYDRSSIKDIATAINASNLGVNPQVDVDIIRLTFAAPTEEVRKNLVKKAKQ 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             E++KI VR+IR++  D  K   K     ED     + ++  +T    K I++    K+
Sbjct: 121 VGEEAKIRVRHIRQEAQDLFK---KDSTTIEDDKKFFQTELDNLTKELNKEIETVVSHKE 177

Query: 181 KEIMHF 186
           K+IM  
Sbjct: 178 KDIMTV 183


>gi|159478729|ref|XP_001697453.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158274332|gb|EDP00115.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 175

 Score =  190 bits (484), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 52/178 (29%), Positives = 100/178 (56%), Gaps = 7/178 (3%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           +RM   ++ +     T+RTGR +P++LD + V+ +G+  PL Q+  VTV +   L+++ +
Sbjct: 2   ERMKKCLAVVGDGFNTIRTGRANPAILDKITVDYFGAPTPLKQMGTVTVPDASTLMITPF 61

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           DK  +  +ER I ES++G+NP  +G+ +R+ +P  T+ RR     +   +A  + ++V  
Sbjct: 62  DKTSLRDIERAIQESDIGINPNNDGERIRLIMPPMTQVRRRDGAHLV--WAGGAGVAV-- 117

Query: 132 IRRDGMDHLKKSRKSG---KASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++  G    K         +  +D   +LE+DIQK+TD+ +K ++   + K +E+M  
Sbjct: 118 VQACGTSTEKPPHPPPDTVELPKDDKKALEDDIQKLTDTYVKKVEDAAKAKTEEVMKL 175


>gi|166154019|ref|YP_001654137.1| ribosome recycling factor [Chlamydia trachomatis 434/Bu]
 gi|166154894|ref|YP_001653149.1| ribosome recycling factor [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335219|ref|ZP_07223463.1| ribosome recycling factor [Chlamydia trachomatis L2tet1]
 gi|238687396|sp|B0B8Q3|RRF_CHLT2 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|238687412|sp|B0BAD2|RRF_CHLTB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|165930007|emb|CAP03490.1| ribosome recycling factor [Chlamydia trachomatis 434/Bu]
 gi|165930882|emb|CAP06444.1| ribosome recycling factor [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 179

 Score =  190 bits (483), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    RTG+  P++++ V VE YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMAGVLTFFQKETRGFRTGKAHPALVETVTVEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDNLTEDAVKSLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|58617480|ref|YP_196679.1| ribosome recycling factor [Ehrlichia ruminantium str. Gardel]
 gi|62900774|sp|Q5FG66|RRF_EHRRG RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|58417092|emb|CAI28205.1| Ribosome recycling factor [Ehrlichia ruminantium str. Gardel]
          Length = 185

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 74/179 (41%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K+RM  T+S    D+  +RTGR   S+LD + VE YG  V LN +++++V + + L+
Sbjct: 7   QDAKNRMEKTLSVYLSDVDGIRTGRARASVLDGIVVETYGGRVKLNTISSISVSDNKTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VWD   V +++  I  SNLG     EG V+R+ VP+ T++ R  LVK+    +E  +I
Sbjct: 67  VKVWDINNVGAIKTAIINSNLGFGFSCEGAVIRLTVPDMTQDMRKNLVKLLGKISEDCRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD MD LK  + +   SED +     +IQKITD  IK I+  F  K+KE++H 
Sbjct: 127 SIRNIRRDIMDKLKIMQDNKDISEDDLRIAGVEIQKITDEIIKKINDTFLAKEKELLHV 185


>gi|29839811|ref|NP_828917.1| ribosome recycling factor [Chlamydophila caviae GPIC]
 gi|33301547|sp|Q824U6|RRF_CHLCV RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|29834158|gb|AAP04795.1| ribosome recycling factor [Chlamydophila caviae GPIC]
          Length = 180

 Score =  189 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 62/178 (34%), Positives = 111/178 (62%), Gaps = 3/178 (1%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
            L + + +M   + F  K++ + RTG+ +P++++ V V+ YG+ + L+ +A+++V + R 
Sbjct: 3   SLTDTEKKMAAALEFFHKEVRSFRTGKANPALVETVTVDVYGTTMRLSDLASISVADTRQ 62

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           LV+S +D   V+++ +GI  +NL L P VEG ++RI VPE T E R  ++K     +E++
Sbjct: 63  LVISPYDANNVSAISKGIIAANLNLQPDVEGTIVRIKVPEPTAEYRNEVIKQLRRKSEEA 122

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K+++RNIRR+  D LK   K    +ED V  +E  +Q++TD   K ID   ++K+ E+
Sbjct: 123 KVAIRNIRRESNDKLK---KDSDLTEDAVKGMEKKVQELTDKFCKQIDEITKQKEAEL 177


>gi|145349027|ref|XP_001418942.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579172|gb|ABO97235.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 238

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 4/180 (2%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
            D +  + +    +  L  D+  LRT R S  M+D + V+ YG   PL+ +  +T    +
Sbjct: 61  YDAKEWQSKFDAALHALDVDLSQLRTARASAGMIDHIIVDVYGEPTPLSHLGTITAPNAQ 120

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L V+++D     SVE+ I  S LG  P      L +P+P  T++ R  + K+A    E 
Sbjct: 121 TLSVTLFDPSTKPSVEKAIVNSPLGFVPKESSDGLIVPIPAMTQDTRKEVCKLASKLGET 180

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +KI+ RNIR      +K++    + SED     E ++Q +TD  +  I      K+KEIM
Sbjct: 181 AKIAARNIRHKAQKRIKRA----EMSEDDRKRAEKNLQALTDDIVGKITQRCAAKEKEIM 236


>gi|57239449|ref|YP_180585.1| ribosome recycling factor [Ehrlichia ruminantium str. Welgevonden]
 gi|58579425|ref|YP_197637.1| ribosome recycling factor [Ehrlichia ruminantium str. Welgevonden]
 gi|62900780|sp|Q5HAF9|RRF_EHRRW RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|57161528|emb|CAH58455.1| ribosome recycling factor [Ehrlichia ruminantium str. Welgevonden]
 gi|58418051|emb|CAI27255.1| Ribosome recycling factor [Ehrlichia ruminantium str. Welgevonden]
          Length = 185

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/179 (40%), Positives = 109/179 (60%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           Q+ K+RM  T+S    D+  +RTGR   S+LD + VE YG  V LN +++++V + + L+
Sbjct: 7   QDAKNRMEKTLSVYLSDVDGIRTGRARASVLDGIVVETYGGRVKLNTISSISVSDNKTLL 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V VW+   V +++  I  SNLG     EG V+R+ VP+ T++ R  LVK+    +E  +I
Sbjct: 67  VKVWEINNVGAIKTAIINSNLGFGFSCEGAVIRLTVPDMTQDMRKNLVKLLGKISEDCRI 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S+RNIRRD MD LK  + +   SED +     +IQKITD  IK I+  F  K+KE++H 
Sbjct: 127 SIRNIRRDIMDKLKIMQDNKDISEDDLRIAGVEIQKITDEIIKKINDTFLAKEKELLHV 185


>gi|15605410|ref|NP_220196.1| ribosome recycling factor [Chlamydia trachomatis D/UW-3/CX]
 gi|255311504|ref|ZP_05354074.1| ribosome recycling factor [Chlamydia trachomatis 6276]
 gi|255317806|ref|ZP_05359052.1| ribosome recycling factor [Chlamydia trachomatis 6276s]
 gi|6831537|sp|O84684|RRF_CHLTR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|3329129|gb|AAC68272.1| Ribosome Releasing Factor [Chlamydia trachomatis D/UW-3/CX]
 gi|296436219|gb|ADH18393.1| ribosome recycling factor [Chlamydia trachomatis G/9768]
 gi|296437147|gb|ADH19317.1| ribosome recycling factor [Chlamydia trachomatis G/11222]
 gi|296438079|gb|ADH20240.1| ribosome recycling factor [Chlamydia trachomatis G/11074]
 gi|297140580|gb|ADH97338.1| ribosome recycling factor [Chlamydia trachomatis G/9301]
 gi|297748808|gb|ADI51354.1| Ribosome Recycling Factor (RRF) [Chlamydia trachomatis D-EC]
 gi|297749688|gb|ADI52366.1| Ribosome Recycling Factor (RRF) [Chlamydia trachomatis D-LC]
          Length = 179

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 66/177 (37%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    RTG+  P++++ V VE YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMVGVLTFFQKETRGFRTGKAHPALVETVTVEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LLSPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDNLTEDAVKSLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|327399655|ref|YP_004340524.1| Ribosome-recycling factor [Hippea maritima DSM 10411]
 gi|327182284|gb|AEA34465.1| Ribosome-recycling factor [Hippea maritima DSM 10411]
          Length = 188

 Score =  187 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 107/188 (56%), Gaps = 2/188 (1%)

Query: 1   MNQVID--LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           M + +D  +  +KD M  T+S  KK + T++TGR   S+ + +KVE+YG  + L Q+A +
Sbjct: 1   MEESVDKVITQMKDEMKKTLSSYKKYLTTVKTGRAHVSVFEGIKVESYGQQMQLKQLATI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +  +   +V+  WD  ++  +E+ I ++N+G  P  +G++++I +P  TEE R  +VK+ 
Sbjct: 61  STPDAMTVVIQPWDVSIIKEIEKAILKANMGFTPQNDGKIIKINIPPMTEEDRKKVVKLL 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              +E  K+++RN R+  +  +K   K    SED     E +++K  D + K +D     
Sbjct: 121 KQESENYKVALRNARKKALKTIKDLEKEKIISEDESKRAEKEVKKALDDSSKKLDELMSN 180

Query: 179 KKKEIMHF 186
           K+KEI++ 
Sbjct: 181 KEKEILNL 188


>gi|303277739|ref|XP_003058163.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460820|gb|EEH58114.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 167

 Score =  187 bits (476), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 66/171 (38%), Positives = 99/171 (57%), Gaps = 5/171 (2%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   +  L++D+  LRTGR SP ML+ + V+AYG   PL  + +VT    + L V ++D 
Sbjct: 1   MDAAVEALERDLGKLRTGRASPGMLESLVVDAYGEPTPLRNLGSVTARNAQTLAVMLYDP 60

Query: 74  EMVASVERGIHESNLGLNPIVEGQ-VLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
            +  +V+  I ES LG NP  +G   L +PVPE T E ++ + K+ H   E +KISVRN 
Sbjct: 61  TLKGAVQNAITESPLGFNPQEDGDGTLLVPVPEMTHETKVQVAKLCHRAGETAKISVRNA 120

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           RR GMD +KK+      +ED     E D+QK++++ +K I+     K+K I
Sbjct: 121 RRKGMDVIKKA----TMTEDEGNRAEKDVQKMSEAFVKKIEELVSAKEKSI 167


>gi|329942362|ref|ZP_08291172.1| ribosome recycling factor [Chlamydophila psittaci Cal10]
 gi|332287003|ref|YP_004421904.1| ribosome recycling factor [Chlamydophila psittaci 6BC]
 gi|313847600|emb|CBY16588.1| putative ribosome recycling factor [Chlamydophila psittaci RD1]
 gi|325506673|gb|ADZ18311.1| ribosome recycling factor [Chlamydophila psittaci 6BC]
 gi|328815272|gb|EGF85260.1| ribosome recycling factor [Chlamydophila psittaci Cal10]
 gi|328914234|gb|AEB55067.1| ribosome recycling factor [Chlamydophila psittaci 6BC]
          Length = 180

 Score =  187 bits (476), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 61/177 (34%), Positives = 111/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + +M   + F  K++ + RTG+ +P++++ V V+ YG+ + L+ +A+++V + R L
Sbjct: 4   LADTEKKMAAALEFFTKEVRSFRTGKANPALVETVTVDVYGTTMRLSDLASISVADTRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +D   V+++ +GI  +NL L P VEG ++RI +PE T E R  ++K     +E++K
Sbjct: 64  VISPYDANNVSAISKGIIAANLNLQPDVEGSIVRIKIPEPTAEYRNEVIKQLRRKSEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR+  D LK   K    +ED V  +E  IQ++TD   K ID   ++K+ ++
Sbjct: 124 VAIRNIRRESNDKLK---KDSDLTEDAVKGMEKKIQELTDKFCKQIDEMTKQKEADL 177


>gi|218514368|ref|ZP_03511208.1| ribosome recycling factor [Rhizobium etli 8C-3]
          Length = 131

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 86/131 (65%), Positives = 107/131 (81%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M++ ID++ +K RM   +S  K D+ +LRTGR S ++LD V +EAYGS VPLNQVAN+TV
Sbjct: 1   MSEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPVTIEAYGSRVPLNQVANITV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EPRML VSVWDK MV++VERGI ESNLGLNPIV+GQ LRIP+PE  EERR +LVKVAH 
Sbjct: 61  PEPRMLTVSVWDKSMVSAVERGIRESNLGLNPIVDGQSLRIPLPELNEERRKSLVKVAHD 120

Query: 121 YAEKSKISVRN 131
           YAEKSK+++R+
Sbjct: 121 YAEKSKVAIRH 131


>gi|15618609|ref|NP_224895.1| ribosome recycling factor [Chlamydophila pneumoniae CWL029]
 gi|15836231|ref|NP_300755.1| ribosome recycling factor [Chlamydophila pneumoniae J138]
 gi|16752341|ref|NP_444599.1| ribosome recycling factor [Chlamydophila pneumoniae AR39]
 gi|33242057|ref|NP_876998.1| ribosome recycling factor [Chlamydophila pneumoniae TW-183]
 gi|6707740|sp|Q9Z7K6|RRF_CHLPN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|4377002|gb|AAD18838.1| Ribosome Releasing Factor [Chlamydophila pneumoniae CWL029]
 gi|7188986|gb|AAF37940.1| ribosome recycling factor [Chlamydophila pneumoniae AR39]
 gi|8979071|dbj|BAA98906.1| ribosome releasing factor [Chlamydophila pneumoniae J138]
 gi|33236567|gb|AAP98655.1| ribosome releasing factor [Chlamydophila pneumoniae TW-183]
 gi|269302486|gb|ACZ32586.1| ribosome recycling factor [Chlamydophila pneumoniae LPCoLN]
          Length = 180

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 64/177 (36%), Positives = 109/177 (61%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           LQ+ + +M   + F  K++ + RTG+  P++++ V V+ YG+ + L+ +A+++V + R L
Sbjct: 4   LQDTEKKMAAALDFFHKEVKSFRTGKAHPALVETVVVDVYGTTMRLSDIASISVADLRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +D    +++ +GI  +NL L P VEG ++RI VPE T + R  ++K      E++K
Sbjct: 64  VISPYDGNNASAIAKGIIAANLNLQPEVEGSIIRIKVPEPTADYRQEMIKQLRRKCEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I+VRNIRR+  D LK   K    +ED+V   E  IQ++TD   K +D   ++K+ EI
Sbjct: 124 INVRNIRREANDKLK---KDSALTEDVVKGNEKKIQELTDKFCKQLDELTKQKEAEI 177


>gi|293400528|ref|ZP_06644673.1| ribosome recycling factor [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305554|gb|EFE46798.1| ribosome recycling factor [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 180

 Score =  185 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/180 (38%), Positives = 108/180 (60%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L   K +M   +  L +++ T+RTG  + S+L+ V  E YGS  P+NQVA++ V+E R L
Sbjct: 4   LDVTKHKMEKAVEKLDENLKTIRTGVANASLLEHVHFEYYGSETPINQVASIKVVEGRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++  +D+  +  +ER I  S+ GL P  +G+V+R+ VP  TEERR  L K A    E++K
Sbjct: 64  MIKPYDRSTLKDIERAIATSDTGLVPQSDGEVIRLNVPALTEERRKQLSKEADKMGEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I+VRN+RR+  D +K   K  + +ED    ++  +QK+TD   K I+    EK+KEIM  
Sbjct: 124 IAVRNVRREANDAIK---KDKELTEDDAKRMQEKVQKLTDEFAKKIEKEVSEKEKEIMKV 180


>gi|115495125|ref|NP_001069775.1| ribosome-recycling factor, mitochondrial precursor [Bos taurus]
 gi|122142430|sp|Q0VCQ4|RRFM_BOVIN RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|111305001|gb|AAI20055.1| Mitochondrial ribosome recycling factor [Bos taurus]
          Length = 262

 Score =  185 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/184 (32%), Positives = 104/184 (56%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      +PLNQ++ +++ 
Sbjct: 80  EDIINLEEVDEEMKSVIEALKDNFNKTVNIRTSPGALDNITVVTADGKLPLNQISQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + ++ +KKS+   KASED +  +E  I ++ D T+  +D     K 
Sbjct: 200 NTNKAKDSLRKVRTNAINKVKKSK--DKASEDTIRLIEKQISQMADDTVAELDRHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|237805028|ref|YP_002889182.1| ribosome recycling factor [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273328|emb|CAX10243.1| ribosome recycling factor [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 179

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 65/177 (36%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    +TG+  P+M++ V +E YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMAGVLTFFQKETRGFKTGKAHPAMVETVTIEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDSLTEDAVKSLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|76789417|ref|YP_328503.1| ribosome recycling factor [Chlamydia trachomatis A/HAR-13]
 gi|237803107|ref|YP_002888301.1| ribosome recycling factor [Chlamydia trachomatis B/Jali20/OT]
 gi|123606674|sp|Q3KL17|RRF_CHLTA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|76167947|gb|AAX50955.1| ribosome recycling factor (RRF) [Chlamydia trachomatis A/HAR-13]
 gi|231274341|emb|CAX11136.1| ribosome recycling factor [Chlamydia trachomatis B/Jali20/OT]
          Length = 179

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/177 (36%), Positives = 110/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + +  M   ++F +K+    +TG+  P++++ V +E YG+ + L+ +A+++V + R L
Sbjct: 3   LASAEKEMAGVLTFFQKETRGFKTGKAHPALVETVTIEVYGTTMRLSDIASISVSDMRQL 62

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           ++S +D   V+++ +GI  +NL L PIVEG  +RI VPE TEE R  ++K     +E++K
Sbjct: 63  LISPYDAGTVSAISKGILAANLNLQPIVEGATVRINVPEPTEEYRREVIKQLKRKSEEAK 122

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR   D LK   K    +ED V SLE  IQ++TD   K I+   ++K+ E+
Sbjct: 123 VAIRNIRRTFNDRLK---KDDSLTEDAVKSLEKKIQELTDKFCKQIEELAKQKEAEL 176


>gi|89898769|ref|YP_515879.1| ribosome recycling factor [Chlamydophila felis Fe/C-56]
 gi|123482688|sp|Q252Q4|RRF_CHLFF RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|89332141|dbj|BAE81734.1| ribosome recycling factor [Chlamydophila felis Fe/C-56]
          Length = 180

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 59/177 (33%), Positives = 109/177 (61%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + +M   + F +K++   RTG+  P++++ V V+ YG+ + L+ +A+++V + R L
Sbjct: 4   LADTEKKMATALEFFQKEIRAFRTGKAHPALVETVTVDVYGTTMRLSDLASISVADTRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +D   V+++ +GI  +NL L P  EG ++RI +PE T E R  ++K     +E++K
Sbjct: 64  VISPYDANNVSAISKGIIAANLNLQPDAEGAIIRIKIPEPTAEYRNEVIKQLRRKSEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RN+RR+  D LK   K    +ED V  +E  IQ++TD   K ID   ++K+ ++
Sbjct: 124 VTIRNVRREANDKLK---KDSDLTEDAVKGMEKKIQELTDKFCKQIDEMSKQKEADL 177


>gi|148377315|ref|YP_001256191.1| ribosome recycling factor (ribosome releasingfactor) [Mycoplasma
           agalactiae PG2]
 gi|291319983|ref|YP_003515241.1| ribosome recycling factor (ribosome releasing factor) [Mycoplasma
           agalactiae]
 gi|148291361|emb|CAL58744.1| Ribosome recycling factor (Ribosome releasingfactor) [Mycoplasma
           agalactiae PG2]
 gi|290752312|emb|CBH40283.1| Ribosome recycling factor (Ribosome releasing factor) [Mycoplasma
           agalactiae]
          Length = 182

 Score =  184 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 56/186 (30%), Positives = 106/186 (56%), Gaps = 4/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+++  LQ +++ +   I+ L  ++    TGR +P ++  +K+  Y +  P+ +++N++V
Sbjct: 1   MDELFILQ-LEEEIDKAINHLVFELSKTSTGRANPQLIRGIKINYYDTLTPIEELSNISV 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E + L++  +D   V  + + I  + LG+NP+ EG  +RI  P  T ER+  LVK    
Sbjct: 60  PEAQQLLIKPFDATTVRDIIKAITSAQLGINPVDEGSQIRIKFPPLTTERKRELVKSLSK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           ++E +K+++RN R++    +K +    + SEDM      D+QKI D  I+++D    +K+
Sbjct: 120 HSETAKVAIRNARQNANKVIKANE---EISEDMQKRYLADVQKIVDKNIEHVDELVSKKE 176

Query: 181 KEIMHF 186
           KEIM  
Sbjct: 177 KEIMTV 182


>gi|257894708|ref|ZP_05674361.1| ribosome recycling factor [Enterococcus faecium 1,231,408]
 gi|257831087|gb|EEV57694.1| ribosome recycling factor [Enterococcus faecium 1,231,408]
          Length = 155

 Score =  184 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 55/145 (37%), Positives = 93/145 (64%), Gaps = 1/145 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I +   K++M      L++++  +R GR + S+LD + V  YG+  PLNQ+A++ +
Sbjct: 1   MADAI-MTEAKEKMKKAAQNLQRELGQIRAGRANASLLDRITVNYYGAPTPLNQMASIQI 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            E R+L+++ +DK ++  VE+ I  S++G++P  +G V+R+ +P+ TEERR  L K    
Sbjct: 60  PEARVLMITPFDKSILQDVEKAIMASDIGISPTNDGNVIRLVIPQLTEERRKELAKDVKK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRK 145
            AE +KI++RNIRRD +D  KK +K
Sbjct: 120 EAENAKIAIRNIRRDAIDEYKKQQK 144


>gi|291408419|ref|XP_002720540.1| PREDICTED: mitochondrial ribosome recycling factor [Oryctolagus
           cuniculus]
          Length = 262

 Score =  184 bits (469), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 61/184 (33%), Positives = 104/184 (56%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+++ + M   +  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 80  EDIINLEDVDEDMKSVLEALKDNFNKTLNIRTSPGSLDQITVVTADGKLALNQISQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ +KKS+   KASED V  +E  I ++ D TI  +D     K 
Sbjct: 200 NTNKAKDSLRRVRTNAMNKVKKSK--DKASEDTVRLIEKQISQMADDTIAELDRHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|190571622|ref|YP_001975980.1| ribosome recycling factor [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019024|ref|ZP_03334831.1| ribosome recycling factor [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238057838|sp|B3CNH2|RRF_WOLPP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|190357894|emb|CAQ55354.1| ribosome recycling factor [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995133|gb|EEB55774.1| ribosome recycling factor [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 185

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 73/185 (39%), Positives = 115/185 (62%), Gaps = 2/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++      K+RM  TI     DM  +RTGR + S+LD + V  YG H  LNQVA V+ 
Sbjct: 2   LNEI--KAKTKERMLKTIQSFHDDMKGVRTGRANASLLDGIVVNIYGGHQKLNQVAGVSA 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           ++ + L V VWD   +  V+  I  +NL LNP+VEG  +RI +P+ T+E R  LVK+ H 
Sbjct: 60  IDNKTLSVKVWDATAIGEVKNAIINANLNLNPVVEGNTIRIVLPDLTQETREKLVKLLHQ 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           ++E +++++RNIRRD M+ +++ +K+ + SED     + +IQ ITD  +K +D     K+
Sbjct: 120 FSENARVAIRNIRRDVMEEIEEMKKNKEISEDDFHVAKKEIQNITDDNVKKVDDDLSIKE 179

Query: 181 KEIMH 185
           K+I+H
Sbjct: 180 KDILH 184


>gi|62184691|ref|YP_219476.1| ribosome recycling factor [Chlamydophila abortus S26/3]
 gi|81313123|sp|Q5L766|RRF_CHLAB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|62147758|emb|CAH63502.1| putative ribosome recycling factor [Chlamydophila abortus S26/3]
          Length = 180

 Score =  184 bits (468), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 61/177 (34%), Positives = 111/177 (62%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L + + +M   + F  K++ + RTG+ +P++++ V V+ YG+ + L+ +A+++V + R L
Sbjct: 4   LADTEKKMAAALEFFTKEVRSFRTGKANPALVETVTVDVYGTTMRLSDLASISVADTRQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+S +D   V+++ +GI  +NL L P VEG ++RI +PE T E R  ++K     +E++K
Sbjct: 64  VISPYDANNVSAISKGIIAANLNLQPDVEGSIVRIKIPEPTAEYRNEVIKQLRRKSEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RNIRR+  D LK   K    +ED V  +E  IQ++TD   K ID   ++K+ ++
Sbjct: 124 VAIRNIRRESNDKLK---KDSDLTEDAVKGMEKKIQELTDKFCKQIDKMSKQKEVDL 177


>gi|222097269|ref|YP_002531326.1| ribosome recycling factor [Bacillus cereus Q1]
 gi|221241327|gb|ACM14037.1| ribosome recycling factor [Bacillus cereus Q1]
          Length = 134

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 64/133 (48%), Positives = 89/133 (66%)

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLA 113
           Q+AN+TV E R+LV+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  
Sbjct: 2   QLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRD 61

Query: 114 LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           LVKV   YAE++K++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D
Sbjct: 62  LVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVD 121

Query: 174 SFFEEKKKEIMHF 186
              + K+KEIM  
Sbjct: 122 EIAKNKEKEIMEV 134


>gi|307106026|gb|EFN54273.1| hypothetical protein CHLNCDRAFT_135841 [Chlorella variabilis]
          Length = 177

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 63/177 (35%), Positives = 106/177 (59%), Gaps = 5/177 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +   K  M   ++ L+ ++  +RTGR +P MLD +KV+ YG  +PL    +V+V +P++L
Sbjct: 1   MTETKSLMERALAHLQGELSNIRTGRATPGMLDHLKVDVYGDRLPLKACGSVSVRDPQLL 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V++V+D + V SV + + ES L L+P  EGQ + +P+P  T E   A++KV     E++K
Sbjct: 61  VITVFDVDAVPSVVKAVSESPLRLSPRAEGQEVLVPIPRPTIESLEAMMKVCKVEGEQAK 120

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +SVR+ R+  MD  KK       SED    +E ++QK+TD  ++ ++   + K+K I
Sbjct: 121 VSVRHARKLAMDAAKKLG-----SEDERKRVEREVQKLTDEYVREVEGAVQRKEKSI 172


>gi|73968248|ref|XP_537859.2| PREDICTED: similar to mitochondrial ribosome recycling factor
           isoform 1 [Canis familiaris]
          Length = 262

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 58/184 (31%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   +  LK +     + R SP  LD + V      + LNQ+  +++ 
Sbjct: 80  EDIINLEEVDEEMKSVMEALKDNFNKTISIRTSPGSLDRITVVTANGKLALNQIGQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P +++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  +VK+A  
Sbjct: 140 SPHLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMMVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+   K SED +  +E  I ++ D T+  +D     K 
Sbjct: 200 NTNKAKDSLRKVRTNAMNKLKKSK--DKVSEDTIRLIEKQISQMADDTVAELDRHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|330444066|ref|YP_004377052.1| ribosome recycling factor [Chlamydophila pecorum E58]
 gi|328807176|gb|AEB41349.1| ribosome recycling factor [Chlamydophila pecorum E58]
          Length = 180

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 63/177 (35%), Positives = 109/177 (61%), Gaps = 3/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L++ + +M  T+ F +K++ T RTG+  P++++ V V+ YG+ + L+ +++++V + R L
Sbjct: 4   LRDAETKMASTLEFFQKEIKTFRTGKAHPALVETVTVDVYGTTMRLSDISSISVADARQL 63

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           VVS +D    +++ +GI  +NL L P VEG ++RI VPE T E R  ++K      E++K
Sbjct: 64  VVSPYDANNASAIAKGILAANLNLQPEVEGAIIRIRVPEPTAELRQDIIKQLRRKCEEAK 123

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I +RNIRR+  D +K   K    +ED V   E  +Q++TD   K ID   ++K+ +I
Sbjct: 124 IQIRNIRRETNDKVK---KDSTLTEDAVKGAEKKVQELTDKFCKQIDEIAKQKEIDI 177


>gi|21312752|ref|NP_080698.1| ribosome-recycling factor, mitochondrial precursor [Mus musculus]
 gi|62901049|sp|Q9D6S7|RRFM_MOUSE RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|12845172|dbj|BAB26646.1| unnamed protein product [Mus musculus]
 gi|18044179|gb|AAH19787.1| Mitochondrial ribosome recycling factor [Mus musculus]
 gi|26328197|dbj|BAC27839.1| unnamed protein product [Mus musculus]
 gi|123208257|emb|CAM20861.1| mitochondrial ribosome recycling factor [Mus musculus]
          Length = 262

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 58/184 (31%), Positives = 100/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ + + M   +  LK +       R +P  LD + V      V LNQ+  +++ 
Sbjct: 80  EDIISLEEVDEDMKSVVEALKDNFNKTLNIRTAPGSLDHITVVTADGKVALNQIGQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQVILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K ++R +R + M+ LKKS+   K SED +  +E  I ++ D T+  +D     K 
Sbjct: 200 NTNKAKENLRKVRTNAMNKLKKSK--DKTSEDTIRLIEKQISQMADDTVAELDQHLAAKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|328874111|gb|EGG22477.1| hypothetical protein DFA_04605 [Dictyostelium fasciculatum]
          Length = 348

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 55/179 (30%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +DL  +K R   T+ F+K+    +R GR  P +L+ + VE    ++ +  +A +T+ +  
Sbjct: 171 VDLSTMKQRCEATMDFVKRQFGDIRVGRAGPELLERITVETPNGNMQIQHMAMITIKDAL 230

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L ++ +D  M+ ++E+ + +S+LGLNP   G ++RI +P+ T++ R  L+K  +  +E+
Sbjct: 231 TLHITPYDPNMLKNIEKALQKSDLGLNPTAVGTLIRISLPKPTQDLRNKLLKNVNTISEE 290

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +K+SVR  R++  D +    K  + ++D   ++E +IQK+TD  I  +    E K KEI
Sbjct: 291 AKVSVRRHRKETTDSV---VKQFRLTKDDEKTIEKNIQKMTDDFIAQVTKATESKVKEI 346


>gi|301760406|ref|XP_002915994.1| PREDICTED: ribosome-recycling factor, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 262

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/184 (32%), Positives = 100/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ + + M   +  LK +       R SP  LD + V      + LNQ+  +++ 
Sbjct: 80  EDIISLEEVDEEMKSVMEALKDNFNKTVNIRTSPGSLDHITVVTADGKLALNQIGQISMK 139

Query: 62  EPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V+ V   E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQLILVNMVSFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+   K SED +  +E  I ++ D T+  +D     K 
Sbjct: 200 NTNKAKDSLRKVRTNAMNKLKKSK--DKVSEDTIRLIEKQISQMADDTVAELDRHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|39938654|ref|NP_950420.1| ribosome recycling factor [Onion yellows phytoplasma OY-M]
 gi|47116996|sp|P61308|RRF_ONYPE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|39721763|dbj|BAD04253.1| ribosome recycling factor [Onion yellows phytoplasma OY-M]
          Length = 184

 Score =  182 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/179 (32%), Positives = 104/179 (58%), Gaps = 4/179 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++ +M      + K+   +RTG  +P++LD + V  YG+   L  +A+++V E   L
Sbjct: 9   LASLETKMTQAQEVMLKNFCDIRTGTANPNILDKITVNYYGAPTFLKTLASISVSEGNQL 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D  ++ ++++ +  SNLG+ P  +G V+R+  P+ TEERR AL+K     AEK+K
Sbjct: 69  NIKPYDSTLIPNIKKVLLASNLGITPQTDGLVVRLVFPKPTEERRKALMKEVEQLAEKTK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           +++RN+RR+G D +KK     + ++D+     N IQ +TD  IK I+     K  E++ 
Sbjct: 129 VAIRNVRREGNDKIKKV----ELTKDLETFYLNQIQTLTDKNIKLIEKHTTTKNTELLK 183


>gi|126294057|ref|XP_001364967.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 262

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 56/184 (30%), Positives = 98/184 (53%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ +   M   +  LK +       R SP  LD + V        LN +  +++ 
Sbjct: 80  EDIICLEEVDVEMKSVVEALKDNFNKNLNIRTSPGSLDHITVTTGDGKFALNHIGQISLK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++ +  E  A+  + I ES + LNP V+G V+R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQLILVNMTNFPECTAAAIKAIRESGMNLNPEVDGTVIRVPIPKVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K ++R +R + M+ LKKS+ S   +ED +  +E  I ++ D T+  +D     K 
Sbjct: 200 NTNKAKDNLRKVRTNAMNKLKKSKDS--VAEDTIKLIEKQIGQMADDTVAEMDKHLALKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|308806109|ref|XP_003080366.1| COG0233: Ribosome recycling factor (ISS) [Ostreococcus tauri]
 gi|116058826|emb|CAL54533.1| COG0233: Ribosome recycling factor (ISS) [Ostreococcus tauri]
          Length = 529

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 4/172 (2%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +    +  L  D+  LRT R S  M+D + V+ YG+  PL+ VA +T    + L V+++D
Sbjct: 66  KFEQAVHALDVDLSHLRTARASEGMIDHIIVDVYGAPTPLSHVATITAPNAQTLSVTLFD 125

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
                SVE+ I  S LGL P      L +P+P  T++ R  + K+AH   E +KI+ RNI
Sbjct: 126 PSTKPSVEKAIMNSPLGLVPRATSDGLIVPIPAMTQDTRKEVCKLAHKLGETAKIAARNI 185

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           R   + H+K++     ASED    LE  +Q + D T   I S    K KEIM
Sbjct: 186 RHKALKHIKRA----AASEDEQKRLEKALQAVADDTASKIASRVAAKDKEIM 233


>gi|308190230|ref|YP_003923161.1| ribosome recycling factor [Mycoplasma fermentans JER]
 gi|319777597|ref|YP_004137248.1| ribosome-recycling factor [Mycoplasma fermentans M64]
 gi|238810012|dbj|BAH69802.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|307624972|gb|ADN69277.1| ribosome recycling factor [Mycoplasma fermentans JER]
 gi|318038672|gb|ADV34871.1| Ribosome-recycling factor [Mycoplasma fermentans M64]
          Length = 183

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 3/172 (1%)

Query: 15  GDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKE 74
              I+    ++  + TGR +P ++  V++  Y +  PL ++A++TV EP+ L++  +D  
Sbjct: 15  EKAINHYAFELSKISTGRANPQLIKGVRINYYDTLTPLEELASITVPEPQQLLIKPFDVS 74

Query: 75  MVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRR 134
               + + I  +NLGLNP+ EG  +RI  P  T ERR  +VK    + E +K+++RN R+
Sbjct: 75  CNHEIAKTILNANLGLNPVDEGNQVRITFPPLTTERRKDMVKSLAKFTENAKVAIRNARQ 134

Query: 135 DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +    +K      + SED      ++IQK  D  I++I+     K+KE+M  
Sbjct: 135 NVNKSIKA---DEELSEDQEKKYLDEIQKEVDKKIEHINKMTINKEKELMSI 183


>gi|6091742|gb|AAF03454.1|AC010797_30 putative ribosome recycling factor [Arabidopsis thaliana]
          Length = 284

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 97/194 (50%), Gaps = 20/194 (10%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
              +M   I  L +D+  LRTGR +P MLD + VE  G  +PLN +A V+VL+P+ L V+
Sbjct: 92  ASSQMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVN 151

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPE-----TTEE-------------RR 111
            +D + V  +E+ I  S LGLNP ++GQ L   +P       +                 
Sbjct: 152 PYDPDTVKELEKAIVASPLGLNPKLDGQRLVASIPAYESSSLSNFISLRLSLDPIYLYEL 211

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
            A+ K+    +E  K S+R  R+  +D +KK+       +D V  LE ++ ++T   +K+
Sbjct: 212 QAMCKIVTKSSEVVKQSIRRARQKALDTIKKA--GSSLPKDEVKRLEKEVDELTKKFVKS 269

Query: 172 IDSFFEEKKKEIMH 185
            +   + K+KEI  
Sbjct: 270 AEDMCKSKEKEITE 283


>gi|126642019|ref|YP_001085003.1| ribosome releasing factor [Acinetobacter baumannii ATCC 17978]
          Length = 144

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/145 (43%), Positives = 91/145 (62%), Gaps = 1/145 (0%)

Query: 42  KVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRI 101
            V  YGS VPLNQVANV V + R L+V  +++ MVA++++ I ES+LGLNPI     +R+
Sbjct: 1   MVPYYGSDVPLNQVANVGVEDSRTLIVQPFERTMVAAIDKAIRESDLGLNPITA-DSIRV 59

Query: 102 PVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
           P+P  TEE R  + K+A + AE +K+++RNIRRD +  +K   K  + SED      +DI
Sbjct: 60  PLPALTEETRRDMQKIARSEAENAKVAIRNIRRDVLGDIKALLKEKEISEDDERRAGDDI 119

Query: 162 QKITDSTIKNIDSFFEEKKKEIMHF 186
           QKITD  +  +D     K+ E+M  
Sbjct: 120 QKITDKYVAEVDKRLAAKEAELMKV 144


>gi|297270215|ref|XP_002800031.1| PREDICTED: ribosome-recycling factor, mitochondrial isoform 2
           [Macaca mulatta]
          Length = 262

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ+  +++ 
Sbjct: 80  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQIGQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGMLIRVPIPQVTREHRETLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K 
Sbjct: 200 NTNKAKDSLRKVRTNAMNKLKKSKDT--VSEDTIRLVEKQISQMADDTVAELDRHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|311246342|ref|XP_003122164.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 1
           [Sus scrofa]
          Length = 262

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 60/184 (32%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ + + M   I  LK +       R SP  LD + V      + LNQ+  +++ 
Sbjct: 80  EDIISLEEVDEEMKSVIEALKDNFNKTVNIRTSPGSLDQITVVTADGKLALNQIGQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQLILVNMASFPECTAAAIKAIRESGMNLNPDVEGTLIRVPIPKVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+   KASED +  +E  I ++ D T+  ++     K 
Sbjct: 200 NTNKAKESLRKVRTNAMNKLKKSK--DKASEDTLRLIEKQISQMADDTVAELERHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|114626532|ref|XP_001135996.1| PREDICTED: mitochondrial ribosome recycling factor isoform 3 [Pan
           troglodytes]
 gi|114626534|ref|XP_001136081.1| PREDICTED: mitochondrial ribosome recycling factor isoform 4 [Pan
           troglodytes]
 gi|114626536|ref|XP_001136160.1| PREDICTED: mitochondrial ribosome recycling factor isoform 5 [Pan
           troglodytes]
 gi|114626538|ref|XP_001136239.1| PREDICTED: mitochondrial ribosome recycling factor isoform 6 [Pan
           troglodytes]
          Length = 262

 Score =  180 bits (458), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 80  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+     SED +  +E  I ++ D T+  +D     K 
Sbjct: 200 NTNKAKDSLRKVRTNSMNKLKKSK--YTVSEDTIRLIEKQISQMADDTVAELDRHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|20270317|ref|NP_620132.1| ribosome-recycling factor, mitochondrial isoform 1 precursor [Homo
           sapiens]
 gi|62901043|sp|Q96E11|RRFM_HUMAN RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|15341771|gb|AAH13049.1| Mitochondrial ribosome recycling factor [Homo sapiens]
 gi|55958149|emb|CAI14711.1| mitochondrial ribosome recycling factor [Homo sapiens]
 gi|158256638|dbj|BAF84292.1| unnamed protein product [Homo sapiens]
 gi|312150650|gb|ADQ31837.1| mitochondrial ribosome recycling factor [synthetic construct]
          Length = 262

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 80  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K 
Sbjct: 200 NTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|282850823|ref|ZP_06260197.1| ribosome recycling factor [Lactobacillus gasseri 224-1]
 gi|282557775|gb|EFB63363.1| ribosome recycling factor [Lactobacillus gasseri 224-1]
          Length = 155

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/144 (39%), Positives = 91/144 (63%), Gaps = 2/144 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N+VI  +  KD M  +I+  +K++  +R    + S+L+ +KV+ YG   PL Q+++V++ 
Sbjct: 3   NEVI--EKAKDNMKKSIAVFQKELGGIRAAVANASLLEGIKVDYYGVPTPLTQMSSVSIP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
           E R+L+V+ +DK  +  +E  I  S+LG+ P  +G V+RI +P+ T ERR  + K     
Sbjct: 61  EARVLMVTPYDKSSLDDIEHAILASDLGITPANDGTVIRIVIPQLTGERRQEIAKQVGKL 120

Query: 122 AEKSKISVRNIRRDGMDHLKKSRK 145
           AEK KI+VRN+RRD MD LK+  K
Sbjct: 121 AEKGKIAVRNVRRDAMDTLKRQEK 144


>gi|50757135|ref|XP_415395.1| PREDICTED: similar to Mitochondrial ribosome recycling factor
           [Gallus gallus]
          Length = 259

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+     M   +  LK+D       R S   LD + V       PLNQ+  ++  
Sbjct: 77  EDIINLEETNTDMQAVVEALKEDFNRNLNVRTSQGALDHIIVTTKDGKFPLNQLGQISQK 136

Query: 62  EPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P+++VV++    E  A+  + I ES + LNP V+G ++R+PVP+ T E R +L K+A  
Sbjct: 137 SPQLIVVNMTSFPESTAAAMKAIRESGMNLNPEVDGTLIRVPVPKVTREHRESLAKLAKQ 196

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              KSK ++R +R   ++ +KK +   K SED +  LE  IQ++ DS    +D     K 
Sbjct: 197 STNKSKEALRKVRSKSVNQVKKFK--SKVSEDTIWLLEKQIQQMADSAAAEMDKLLAAKT 254

Query: 181 KEIM 184
           KE++
Sbjct: 255 KELL 258


>gi|254797264|ref|YP_003082106.1| ribosome recycling factor [Neorickettsia risticii str. Illinois]
 gi|254590506|gb|ACT69868.1| ribosome recycling factor [Neorickettsia risticii str. Illinois]
          Length = 185

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/180 (40%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++   D++  +      D+  +R+G +S S+LD V V  +   + LNQVA+++V+  +ML
Sbjct: 6   IKETNDKLRSSYEVFLSDLKGIRSGSLSVSILDGVIVSTHMGKLRLNQVASLSVVNNKML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWDK  V +V+  I  SNLG+NPIVEG VLR+PVP+ TEERR  LVKV   Y +++K
Sbjct: 66  SVQVWDKSTVGAVKDAILTSNLGMNPIVEGSVLRLPVPDLTEERRKELVKVLKKYGDRAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD +  +K   K+ + SED + +L   I KI       ID    +K+ +I+  
Sbjct: 126 VAVRNIRRDAVSRIKVLEKAKEISEDDMHALLKKIDKIVSEEDARIDDAVSKKENDILKV 185


>gi|189184500|ref|YP_001938285.1| ribosome recycling factor [Orientia tsutsugamushi str. Ikeda]
 gi|238692022|sp|B3CUK4|RRF_ORITI RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|189181271|dbj|BAG41051.1| ribosome recycling factor [Orientia tsutsugamushi str. Ikeda]
          Length = 187

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 119/187 (63%), Gaps = 1/187 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    + ++  +M   +  L  D+  LR G+ S   LD V+VEAY S VP+ QVA ++V
Sbjct: 1   MNHEELINSLTKKMNGALQVLDADLKGLRVGQASAYFLDPVQVEAYNSKVPILQVATISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVE-GQVLRIPVPETTEERRLALVKVAH 119
            + + ++V VWDK +V +V++ I E+NLG++ I +  Q++R+ +P  +EERR  LVK+AH
Sbjct: 61  SDTKTILVQVWDKSLVKAVKKAIMEANLGVSIISDDNQIIRLQLPIPSEERRKELVKIAH 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
            Y EKSKI VRNIRRDG++ +K+  ++ + S+D       +IQ++TD     ID   + K
Sbjct: 121 KYQEKSKIIVRNIRRDGIELIKQMEQNTECSKDEAHIYSKEIQELTDKYCDKIDKIIKLK 180

Query: 180 KKEIMHF 186
           +++I++ 
Sbjct: 181 EQDIINL 187


>gi|148285160|ref|YP_001249250.1| ribosome recycling factor [Orientia tsutsugamushi str. Boryong]
 gi|166230811|sp|A5CFN3|RRF_ORITB RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|146740599|emb|CAM81253.1| ribosome recycling factor [Orientia tsutsugamushi str. Boryong]
          Length = 187

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/187 (39%), Positives = 119/187 (63%), Gaps = 1/187 (0%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN    + ++  +M   +  L  D+  LR G+ S   LD V+VEAY S VP+ QVA ++V
Sbjct: 1   MNHEELINSLTKKMNGALQVLDADLKGLRVGQASAYFLDPVQVEAYNSRVPILQVATISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVE-GQVLRIPVPETTEERRLALVKVAH 119
            + + ++V VWDK +V +V++ I E+NLG++ I +  Q++R+ +P  +EERR  LVK+AH
Sbjct: 61  SDTKTILVQVWDKSLVKAVKKAIMEANLGVSIISDDNQIIRLQLPIPSEERRKELVKIAH 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
            Y EKSKI VRNIRRDG++ +K+  ++ + S+D       +IQ++TD     ID   + K
Sbjct: 121 KYQEKSKIIVRNIRRDGIELIKQMEQNTECSKDEAHIYSKEIQELTDKYCDKIDKIIKLK 180

Query: 180 KKEIMHF 186
           +++I++ 
Sbjct: 181 EQDIINL 187


>gi|56605784|ref|NP_001008355.1| ribosome-recycling factor, mitochondrial precursor [Rattus
           norvegicus]
 gi|62900751|sp|Q5RKI9|RRFM_RAT RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|55715664|gb|AAH85779.1| Mitochondrial ribosome recycling factor [Rattus norvegicus]
          Length = 262

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 57/184 (30%), Positives = 100/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ + + M   +  LK +       R +P  LD + V      + LNQ+  +++ 
Sbjct: 80  EDIISLEEVDEDMKSVMEALKDNFNKTLNIRTAPGSLDHITVVTADGKLALNQIGQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K ++R +R + M+ LKKS+   K SED +  +E  I ++ D T+  +D     K 
Sbjct: 200 NTNKAKENLRKVRTNAMNKLKKSK--DKTSEDTIRLIEKQISQMADDTVAELDRHLAAKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|68171353|ref|ZP_00544749.1| Ribosome recycling factor [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999224|gb|EAM85878.1| Ribosome recycling factor [Ehrlichia chaffeensis str. Sapulpa]
          Length = 187

 Score =  178 bits (452), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/181 (37%), Positives = 107/181 (59%), Gaps = 2/181 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL--EPRM 65
           Q+ K RM  ++S    D+  +RTGR   S+L+ + VE YG  V LN +++V+V   + + 
Sbjct: 7   QDAKSRMEKSLSVYLSDIDGIRTGRARTSVLNGIVVETYGGRVKLNTISSVSVSVSDNKT 66

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           L++ VWD   + +++  I  SNLG     E   +R+ VP+ T++ R  LVK+    +E  
Sbjct: 67  LMIKVWDSNNIGAIKTAIMNSNLGFGISCEATTIRLTVPDMTQDMRKNLVKLLGKISEDC 126

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++S+RNIRRD MD LK  + S + SED +     +IQKITD  +K ++  F  K+KE++H
Sbjct: 127 RVSIRNIRRDIMDRLKVMQDSKEISEDDLRVAGVEIQKITDDIMKKVNDAFTSKEKELLH 186

Query: 186 F 186
            
Sbjct: 187 V 187


>gi|313678182|ref|YP_004055922.1| ribosome recycling factor [Mycoplasma bovis PG45]
 gi|312950548|gb|ADR25143.1| ribosome recycling factor [Mycoplasma bovis PG45]
          Length = 183

 Score =  177 bits (451), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 94/171 (54%), Gaps = 3/171 (1%)

Query: 16  DTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEM 75
             I+ L  ++    TGR +P ++  +K+  Y +  P+ ++AN++V E + L++  +D   
Sbjct: 16  KAINHLVFELSKTSTGRANPQLIRGIKINYYDTLTPIEELANISVPEAQQLLIKPFDATT 75

Query: 76  VASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRD 135
           V  + + I  + LG+NP+ EG  +RI  P  T ER+  LVK    ++E +K+ +RN R++
Sbjct: 76  VRDIIKAITNAQLGINPVDEGSQIRIKFPPLTTERKKELVKALSKHSEAAKVGIRNARQN 135

Query: 136 GMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
               +K    + + SED       D+QKI D  I+++D    +K+KEIM  
Sbjct: 136 ANKIIK---SNDEISEDAQKRYLLDVQKIVDKNIEHVDELVSKKEKEIMTV 183


>gi|209736906|gb|ACI69322.1| Ribosome recycling factor, mitochondrial precursor [Salmo salar]
          Length = 265

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 55/184 (29%), Positives = 103/184 (55%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ +K+ M   ++ LK D     + R SP  LD + V       PLNQ+  +++ 
Sbjct: 83  EDIISLEEVKEDMAAVLTTLKDDFSRNLSIRTSPGALDHIVVSTADGKFPLNQLGQISMK 142

Query: 62  EPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E V +  R + ES++ LNP V+G ++R+ +P+ T E R  L K+A  
Sbjct: 143 SPQLIMVNMTAFPEAVGAATRSLRESSMKLNPEVDGTIIRVAIPKVTREHRENLAKLAKQ 202

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           ++ K+K S+R +R + +  +KK++ +   SED +  +E  I ++ DS   ++D     K 
Sbjct: 203 FSNKAKESLRKVRSNAITQVKKAKDT--VSEDTIRLVEKQIGQMADSFAADVDKQLTTKT 260

Query: 181 KEIM 184
           KE++
Sbjct: 261 KELL 264


>gi|224073899|ref|XP_002189665.1| PREDICTED: mitochondrial ribosome recycling factor [Taeniopygia
           guttata]
          Length = 259

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+   + M   I  LK+D     + R SP  LD + V       PLNQ+  ++  
Sbjct: 77  EDIINLEETNEDMQAVIEALKEDFSRNLSVRTSPGALDHITVMTKDGKFPLNQLGQISQK 136

Query: 62  EPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP V+G V+R+PVP+ T E R +L K+A  
Sbjct: 137 SPQLMIVNMTSFPESTAAAAKAIRESGMNLNPEVDGTVIRVPVPKVTREHRESLAKLAKQ 196

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           +  KSK ++R +R   +  +KKS+   K SED +  LE  IQ++ D     +D     K 
Sbjct: 197 FTNKSKEALRKVRSKSITQVKKSK--NKVSEDTIWLLEKQIQQMADEAATEMDKLLAAKT 254

Query: 181 KEIM 184
           K+++
Sbjct: 255 KKLL 258


>gi|294155890|ref|YP_003560274.1| ribosome recycling factor [Mycoplasma crocodyli MP145]
 gi|291600515|gb|ADE20011.1| ribosome recycling factor [Mycoplasma crocodyli MP145]
          Length = 183

 Score =  177 bits (449), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 54/186 (29%), Positives = 98/186 (52%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   + L  I+D     I+  K ++  + TGR +P ++  ++V  Y +  PL +++N++V
Sbjct: 1   MELDLYLLEIEDAAQKAINHYKFELSKMSTGRANPQIIKGIRVTYYDTPTPLEELSNISV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP+ L++  +D   V  + + +  +NLG+ P+ EG  +R+  P  T ERR  +VK    
Sbjct: 61  PEPQQLLIKPYDISSVRDIVKALTNANLGILPVDEGHQIRMTFPTLTTERRKEIVKSLSK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E +K+++RN R+D    +K      + SED+       IQK  D   + I+   +EK+
Sbjct: 121 YTEAAKVTIRNARQDVNKSIKN---DEELSEDIEKRYLEAIQKEVDKYTEIINDLTKEKE 177

Query: 181 KEIMHF 186
            ++M  
Sbjct: 178 NDLMKL 183


>gi|197127175|gb|ACH43673.1| putative mitochondrial ribosome recycling factor isoform 1
           [Taeniopygia guttata]
          Length = 259

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+   + M   I  LK+D     + R SP  LD + V       PLNQ+  ++  
Sbjct: 77  EDIINLEETNEDMQAVIEALKEDFSRNLSVRTSPGALDHITVMTKDGKFPLNQLGQISQK 136

Query: 62  EPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP V+G V+R+PVP+ T E R +L K+A  
Sbjct: 137 SPQLMIVNMTSFPESTAAAAKAIRESGMNLNPEVDGTVIRVPVPKVTREHRESLAKLAKQ 196

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           +  KSK ++R +R   +  +KKS+   K SED +  LE  IQ++ D     +D     K 
Sbjct: 197 FTNKSKEALRKVRSKSITQVKKSK--NKVSEDTIWLLEKQIQQMADEAATEMDKLLAAKT 254

Query: 181 KEIM 184
           KE++
Sbjct: 255 KELL 258


>gi|15606111|ref|NP_213488.1| ribosome recycling factor [Aquifex aeolicus VF5]
 gi|3914876|sp|O66928|RRF_AQUAE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|14277735|pdb|1GE9|A Chain A, Solution Structure Of The Ribosome Recycling Factor
 gi|2983294|gb|AAC06886.1| ribosome recycling factor [Aquifex aeolicus VF5]
          Length = 184

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/180 (35%), Positives = 105/180 (58%), Gaps = 4/180 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
            +  +  M   + + K ++  LRT R S ++++ +KVE YGS VP+ Q+  ++V E   +
Sbjct: 9   FKEAEKDMKKAVEYYKNEIAGLRTSRASTALVEEIKVEYYGSKVPIKQLGTISVPEHNQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+ VWD+  V ++E+ I E  L LNP V+G V+R+ +P  TEERR  LV++ H   E+++
Sbjct: 69  VIQVWDQNAVPAIEKAIREE-LNLNPTVQGNVIRVTLPPLTEERRRELVRLLHKITEEAR 127

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + VRN+RR+  + +++       SED        +QK+TD  I  I+   E K+KEIM  
Sbjct: 128 VRVRNVRREAKEMIEELE---GISEDEKKRALERLQKLTDKYIDEINKLMEAKEKEIMSV 184


>gi|85057831|ref|YP_456747.1| ribosome recycling factor [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|123518096|sp|Q2NIS5|RRF_AYWBP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|84789936|gb|ABC65668.1| ribosome recycling factor [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 184

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 103/177 (58%), Gaps = 4/177 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +++ +M      + K+   +RTG  +P++LD + V  YG+   L  +A+++V E   +
Sbjct: 9   LASLEIKMTQAQELMLKNFCDIRTGTANPNILDKITVNYYGATTFLKTLASISVSEGNQI 68

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            +  +D  ++ ++++ +  SNLG+ P  +G V+R+  P+ TEERR AL+K     +EK+K
Sbjct: 69  NIKPYDSNLIPNIKKVLLASNLGITPQTDGVVVRLVFPKPTEERRKALMKEVEQLSEKTK 128

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +++RN+RR+G D +KK     + ++D+     N IQ +TD  IK ID     K  E+
Sbjct: 129 VAIRNVRREGNDKIKKV----ELTKDLETFYLNQIQTLTDKNIKLIDKQTATKNIEL 181


>gi|332226320|ref|XP_003262337.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Nomascus
           leucogenys]
          Length = 262

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/184 (30%), Positives = 100/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 80  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+   E R  LVK+A  
Sbjct: 140 SPQLILVNMASSPECTAAAIKAIRESGMNLNPEVEGALIRVPIPQVIREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +  + ++ LKKS+ +   SED +  +E  I ++ D T+  +D     K 
Sbjct: 200 NTNKAKYSLRKVCTNAVNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|118404150|ref|NP_001072392.1| mitochondrial ribosome recycling factor [Xenopus (Silurana)
           tropicalis]
 gi|111305781|gb|AAI21590.1| mitochondrial ribosome recycling factor [Xenopus (Silurana)
           tropicalis]
          Length = 252

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+++K  M   +  LK+D     + R SP   D + V       PLNQ+  +++ 
Sbjct: 70  EDIINLEDVKQEMKSILENLKEDFTKNLSIRTSPGAFDHITVTTKDGKFPLNQLGQISLK 129

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++ ++++    E   +    + +S + LNP ++G ++R+PVP+ T E R  L K+A  
Sbjct: 130 SPQLFIINMASFPESATAAVNALRDSQMNLNPELDGTIIRVPVPQVTREHRENLTKLAKQ 189

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R  R   +  +KK +     SED+V  LE  IQ++ D     +D     K 
Sbjct: 190 LTNKAKDSLRKARTGAVQEVKKCK--EGVSEDIVKLLEKQIQQMADDIATELDKQLATKT 247

Query: 181 KEIM 184
           KE++
Sbjct: 248 KELL 251


>gi|228966769|ref|ZP_04127813.1| Ribosome-recycling factor [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228792868|gb|EEM40426.1| Ribosome-recycling factor [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 142

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/128 (47%), Positives = 86/128 (67%)

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLA 113
           Q+AN+TV E R+LV+  +DK  +  +E+ I +++LGLNP  +G V+RI  P  TEERR  
Sbjct: 2   QLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRD 61

Query: 114 LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           LVKV   YAE++K++VRN+RRDG D LKK  K+G+ +ED +     DIQK TD  I  +D
Sbjct: 62  LVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVD 121

Query: 174 SFFEEKKK 181
              + K+K
Sbjct: 122 EIAKNKRK 129


>gi|88608154|ref|YP_506809.1| ribosome recycling factor [Neorickettsia sennetsu str. Miyayama]
 gi|123491285|sp|Q2GCI7|RRF_NEOSM RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|88600323|gb|ABD45791.1| ribosome recycling factor [Neorickettsia sennetsu str. Miyayama]
          Length = 185

 Score =  175 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 72/180 (40%), Positives = 110/180 (61%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++   D++  +      D+  +R+G +S S+LD V V  +   + LNQVA+++V+  +ML
Sbjct: 6   IKETNDKLRSSYEVFLSDLKGIRSGSLSVSILDGVIVSTHMGKLRLNQVASLSVVNNKML 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V VWDK  V +V+  I  SNLG+NPIVEG VLR+PVP+ TEERR  LVKV   Y +++K
Sbjct: 66  SVQVWDKSTVGAVKDAILTSNLGMNPIVEGSVLRLPVPDLTEERRKELVKVLKKYGDRAK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VRNIRRD +  +K   K+ + SE+ + +L   I KI       ID    +K+ +I+  
Sbjct: 126 VAVRNIRRDAISRIKVLEKAKEISENDMHALLKKIDKIISEEDARIDDAVSKKETDILKV 185


>gi|37498991|gb|AAQ91586.1| ribosome recycling factor [Helicobacter mustelae]
          Length = 139

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 52/139 (37%), Positives = 85/139 (61%)

Query: 36  SMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVE 95
           ++LD VKV+ YG+  PLNQV +V   +   ++++ W+K ++  +ER I E+N+G+NP  +
Sbjct: 1   NILDNVKVDYYGTPTPLNQVGSVIAQDATTILITPWEKNLLKDIERAIQEANIGVNPNND 60

Query: 96  GQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
           G+ +++  P  T+E+R  + K   A  EK+KI++RNIR+D  + +KK  K    +ED   
Sbjct: 61  GETIKLFFPPMTQEQRKEIAKDTKAMGEKAKIAIRNIRQDSNNQIKKLEKDKNITEDESK 120

Query: 156 SLENDIQKITDSTIKNIDS 174
              + IQK TD   K ID 
Sbjct: 121 KAHDTIQKYTDEYAKKIDK 139


>gi|66827879|ref|XP_647294.1| hypothetical protein DDB_G0268518 [Dictyostelium discoideum AX4]
 gi|60475777|gb|EAL73712.1| hypothetical protein DDB_G0268518 [Dictyostelium discoideum AX4]
          Length = 263

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 59/179 (32%), Positives = 108/179 (60%), Gaps = 4/179 (2%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D+ ++  +   TI ++ +++  +R GRV P +L+ + VE    ++ L  +A +T+ +  
Sbjct: 86  VDISSVSSQGDKTIEYVSRELGNIRFGRVGPELLERINVETPSGNLLLPHMAMITIKDSL 145

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L ++++D  ++++VER +  S LGLNP      +R+ +P+ T++ R  L+K  +  +E 
Sbjct: 146 TLNITLYDSSLLSNVERALTNSGLGLNPQTFDTTIRVSLPKPTQDLRQKLIKQVNTISED 205

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +K+S+R  R+DGMD LK+ +     ++D   +LE +IQKITD  IK+I    E K KEI
Sbjct: 206 AKVSIRRHRKDGMDILKRYK----LTKDDEKTLEKNIQKITDDYIKSITKITETKLKEI 260


>gi|15828690|ref|NP_326050.1| ribosome recycling factor (ribosome releasing factor) [Mycoplasma
           pulmonis UAB CTIP]
 gi|22001949|sp|Q98QZ1|RRF_MYCPU RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|14089632|emb|CAC13392.1| RIBOSOME RECYCLING FACTOR (RIBOSOME RELEASING FACTOR) [Mycoplasma
           pulmonis]
          Length = 187

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 50/186 (26%), Positives = 104/186 (55%), Gaps = 4/186 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N+V     ++++  + +S  + ++  + TGR +P ++  +KV  Y   +PL Q++N++V
Sbjct: 6   INEVF--STLEEKSMNVVSNFEFNLSKISTGRANPQLIKNIKVSYYEELIPLEQISNISV 63

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            EP+ L++  +D  +   + + +  +NL +  + EG  +R+  P    +RR  LVK  + 
Sbjct: 64  PEPQQLLIKPFDHNITKEIHKSLLLANLDVAIVNEGNQIRLNFPALNTQRRKELVKSLNK 123

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           + E++++S+R +R++    +K  +   + SED +   E  IQ I DS I+ ID   + K+
Sbjct: 124 FTEQARVSIRLLRQESNKKIKSFK--SEISEDDIKKYETKIQTINDSYIEQIDEITKRKE 181

Query: 181 KEIMHF 186
           +E+M  
Sbjct: 182 RELMEI 187


>gi|326930532|ref|XP_003211400.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Meleagris
           gallopavo]
          Length = 267

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 96/184 (52%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+     M   +  LK+D       R S   LD + V       PLNQ+  ++  
Sbjct: 85  EDIINLEETSADMQAVVEALKEDFNRNLNVRTSQGALDHIIVTTKDGKFPLNQLGQISQK 144

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P+++VV++ +  E  A+  + I ES + LNP V+G ++R+PVP+ T E R  L K+A  
Sbjct: 145 SPQLIVVNMINFPESTAAAMKAIRESGMNLNPEVDGTLIRVPVPKVTREHREGLAKLAKQ 204

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              KSK ++R +R   ++ +KK +   K SED +  LE  IQ++ DS    +D     K 
Sbjct: 205 STNKSKEALRKVRSKSINQVKKFK--SKVSEDTIWLLEKQIQQMADSAAAEMDKLLAAKT 262

Query: 181 KEIM 184
           KE++
Sbjct: 263 KELL 266


>gi|148670216|gb|EDL02163.1| mCG10533, isoform CRA_c [Mus musculus]
          Length = 345

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 3/181 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ + + M   +  LK +       R +   LD + V      V L+Q+  +++ 
Sbjct: 80  EDIISLEEVDEDMKSVMEALKDNFNRTLNIRTASGSLDHITVVTADGKVALSQIGQISMK 139

Query: 62  EPRMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I  S + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQVILVNMAIFPECTAAAIKAIRGSRMNLNPEVEGTLIRVPIPKLTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K ++R +  + M+ LKKS+   K SED +  +E  I +I D T+  +D     + 
Sbjct: 200 NTNKAKENLRKVCTNAMNKLKKSK--DKTSEDTIRLMEKQISQIADDTVAELDQHLAARP 257

Query: 181 K 181
           K
Sbjct: 258 K 258


>gi|119607927|gb|EAW87521.1| mitochondrial ribosome recycling factor, isoform CRA_b [Homo
           sapiens]
          Length = 319

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 3/167 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 154 EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 213

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 214 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQ 273

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDS 167
              K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D 
Sbjct: 274 NTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADD 318


>gi|55958151|emb|CAI14713.1| mitochondrial ribosome recycling factor [Homo sapiens]
          Length = 218

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 36  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 95

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 96  SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQ 155

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+ +   SED +  +E  I ++ D T+  +D     K 
Sbjct: 156 NTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTIRLIEKQISQMADDTVAELDRHLAVKT 213

Query: 181 KEIM 184
           KE++
Sbjct: 214 KELL 217


>gi|116515085|ref|YP_802714.1| hypothetical protein BCc_145 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285519|sp|Q057S8|RRF_BUCCC RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|116256939|gb|ABJ90621.1| ribosome recycling factor [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 185

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/174 (33%), Positives = 102/174 (58%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +M   +   K D+  +R  R +P +LD + ++ YG+H  L++++N+ +     L +S++D
Sbjct: 12  KMNKCVLNFKNDLNKIRANRATPELLDNIFIDYYGTHTALSKLSNIIIENNSTLKISLFD 71

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             +  SVE+ I  SNLGLNPI     +RI +P  TE+RR  +VK+    AE ++IS+RNI
Sbjct: 72  ISIKNSVEKSIINSNLGLNPISSDSNIRIKIPALTEQRRKDIVKIIKNDAENTRISIRNI 131

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR+    +K   K  + ++D+   ++ +IQ+ T+  IK I+     K+KE++  
Sbjct: 132 RREANIQIKTLLKEKEINQDIEKQVKLEIQRYTNLFIKKINDILSIKEKELLTI 185


>gi|114626542|ref|XP_001135833.1| PREDICTED: similar to Mitochondrial ribosome recycling factor
           isoform 2 [Pan troglodytes]
          Length = 218

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 36  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 95

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 96  SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQ 155

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+     SED +  +E  I ++ D T+  +D     K 
Sbjct: 156 NTNKAKDSLRKVRTNSMNKLKKSK--YTVSEDTIRLIEKQISQMADDTVAELDRHLAVKT 213

Query: 181 KEIM 184
           KE++
Sbjct: 214 KELL 217


>gi|297710938|ref|XP_002832116.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Pongo
           abelii]
          Length = 262

 Score =  172 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/184 (30%), Positives = 98/184 (53%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 80  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+   E R  LVK+A  
Sbjct: 140 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGALIRVPIPQVIREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+  +  + M+ LKKS+ +   SED +   E  I ++ D T+  +D     K 
Sbjct: 200 NTNKAKYSLWKVCTNAMNKLKKSKDT--VSEDTIRLTEKQISQMADDTVAELDRHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|1149697|emb|CAA60206.1| rrf [Clostridium perfringens]
          Length = 132

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/132 (44%), Positives = 89/132 (67%)

Query: 47  GSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPET 106
           GS  PLNQVANV+  EPR+LV++ W+K M+  +E+ I +S+LG+NP  +G ++R+ VPE 
Sbjct: 1   GSMCPLNQVANVSSPEPRLLVITPWEKPMLKEIEKAILKSDLGINPNNDGTIIRLLVPEL 60

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           TEE R  LVK      E++K+++R+IR+D  D +K  +K G  +ED +   E+DIQK+TD
Sbjct: 61  TEETRKNLVKNVKKVGEQAKVAIRSIRKDANDKVKNFKKEGTITEDEMKKGEDDIQKVTD 120

Query: 167 STIKNIDSFFEE 178
             +K ID+    
Sbjct: 121 KFVKEIDTIVAA 132


>gi|328768245|gb|EGF78292.1| hypothetical protein BATDEDRAFT_26860 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 273

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/180 (35%), Positives = 103/180 (57%), Gaps = 3/180 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
             +   +  M + +  L+KD+  +R GR +P++LD V+V+  G  V L  VA +TV +  
Sbjct: 95  FQMDKYEQLMQNAVEKLRKDLGLIRMGRANPALLDSVRVKHQGKSVALVDVAQITVKDAH 154

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIV-EGQVLRIPVPETTEERRLALVKVAHAYAE 123
            LV+ V D+++V+ VE+ + ++NLGLNP       L++PVP   +E R  ++K     AE
Sbjct: 155 TLVIVVSDEQLVSVVEKAVRDANLGLNPQSLPPSSLKVPVPRMAKEFRETIIKNIGRIAE 214

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
             ++ +R+ R D    LK++  S K + D    LE DIQ++TD  IK+ D+    K+KEI
Sbjct: 215 ACRVRIRSARADARTALKRT--SLKPNSDQSRMLEKDIQQLTDKYIKDTDAAVLAKEKEI 272


>gi|294660229|ref|NP_852872.2| ribosome-recycling factor [Mycoplasma gallisepticum str. R(low)]
 gi|60416389|sp|Q7NC19|RRF_MYCGA RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|284811884|gb|AAP56440.2| ribosome-recycling factor (RRF) (Ribosome-releasing factor)
           [Mycoplasma gallisepticum str. R(low)]
 gi|284930333|gb|ADC30272.1| ribosome-recycling factor (RRF) (Ribosome-releasing factor)
           [Mycoplasma gallisepticum str. R(high)]
          Length = 183

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 98/169 (57%), Gaps = 3/169 (1%)

Query: 18  ISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVA 77
           I++ + ++  +R+GR +  +LD V+ E YG   PL ++A++++ EPR +++  ++K  V 
Sbjct: 18  INWFEGELAKVRSGRANLKILDNVRAEYYGEQTPLIEMASLSIPEPREILIKPYEKSSVN 77

Query: 78  SVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGM 137
            ++  + ++NL L P+V+G  +RI +P  TEE R   VK   A  EK+K  VR IRRD +
Sbjct: 78  LIQAALLKANLNLTPVVDGDKIRIKLPLLTEENRKENVKKVKAVGEKAKQEVRFIRRDTL 137

Query: 138 DHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +K       A +D+    E  + KIT   I  IDS   +K+K+++  
Sbjct: 138 NKIK---SDKIADKDLNKYFEEQVDKITKKYIDQIDSILAKKEKDLLSL 183


>gi|148670214|gb|EDL02161.1| mCG10533, isoform CRA_a [Mus musculus]
          Length = 332

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 3/181 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ + + M   +  LK +       R +   LD + V      V L+Q+  +++ 
Sbjct: 80  EDIISLEEVDEDMKSVMEALKDNFNRTLNIRTASGSLDHITVVTADGKVALSQIGQISMK 139

Query: 62  EPRMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I  S + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQVILVNMAIFPECTAAAIKAIRGSRMNLNPEVEGTLIRVPIPKLTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K ++R +  + M+ LKKS+   K SED +  +E  I +I D T+  +D     + 
Sbjct: 200 NTNKAKENLRKVCTNAMNKLKKSK--DKTSEDTIRLMEKQISQIADDTVAELDQHLAARP 257

Query: 181 K 181
           K
Sbjct: 258 K 258


>gi|284931100|gb|ADC31038.1| ribosome-recycling factor (RRF) (Ribosome-releasing factor)
           [Mycoplasma gallisepticum str. F]
          Length = 183

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 98/169 (57%), Gaps = 3/169 (1%)

Query: 18  ISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVA 77
           I++ + ++  +R+GR +  +LD V+ E YG   PL ++A++++ EPR +++  ++K  V 
Sbjct: 18  INWFEGELAKVRSGRANLKILDNVRAEYYGEQTPLIEMASLSIPEPREILIKPYEKSSVN 77

Query: 78  SVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGM 137
            ++  + ++NL L P+V+G  +RI +P  TEE R   VK   A  EK+K  VR IRRD +
Sbjct: 78  PIQAALLKANLNLTPVVDGDKIRIKLPLLTEENRKENVKKVKAVGEKAKQEVRFIRRDTL 137

Query: 138 DHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           + +K       A +D+    E  + KIT   I  IDS   +K+K+++  
Sbjct: 138 NKIK---SDKIADKDLNKYFEEQVDKITKKYIDLIDSILAKKEKDLLSL 183


>gi|197294561|ref|YP_001799102.1| ribosome recycling factor [Candidatus Phytoplasma australiense]
 gi|226703266|sp|B1VA77|RRF_PHYAS RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|171853888|emb|CAM11850.1| Ribosome recycling factor [Candidatus Phytoplasma australiense]
          Length = 184

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 60/177 (33%), Positives = 104/177 (58%), Gaps = 4/177 (2%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           I+ +M      + K+ + +RTG  +P++L+ V +  YGS  PL  +++++V E   L + 
Sbjct: 12  IEKKMSQAQEVMLKNFLEIRTGYANPNILNKVNINYYGSQTPLKTLSSISVSEGTQLQIK 71

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            ++K ++ S+++ I  S+LG+ P  +G +LR+  P+ TEERR  LVK     +E++K++V
Sbjct: 72  PYEKTLIPSIKKAILASDLGITPETDGVLLRLNFPKPTEERRKVLVKEVDKLSEQTKVAV 131

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RNIRRD  D +KK       ++D+ A     IQ +TD  +K I+     K KE++ F
Sbjct: 132 RNIRRDANDKIKKL----ALTKDLEALYLEKIQILTDKNMKMIEKEANNKNKELLKF 184


>gi|205373430|ref|ZP_03226234.1| ribosome recycling factor [Bacillus coahuilensis m4-4]
          Length = 132

 Score =  170 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/132 (43%), Positives = 90/132 (68%)

Query: 55  VANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLAL 114
           +A+++V E R+LV+  +DK ++  +E+ I  S+LGLNP  +G ++R+ +P  TEERR  L
Sbjct: 1   MASISVPEARLLVIQPYDKSILGEIEKAILRSDLGLNPSNDGSIIRLMIPALTEERRKEL 60

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           VK+    AE +K+++RNIRRD  D LKK  K+G+ +ED +    +D+QK+TD  I+ IDS
Sbjct: 61  VKLVKKEAEDAKVAIRNIRRDTNDDLKKQEKNGEITEDQLRGYSDDVQKLTDKNIEKIDS 120

Query: 175 FFEEKKKEIMHF 186
             ++K+ EIM  
Sbjct: 121 MTKDKENEIMSV 132


>gi|330846602|ref|XP_003295107.1| hypothetical protein DICPUDRAFT_160263 [Dictyostelium purpureum]
 gi|325074270|gb|EGC28370.1| hypothetical protein DICPUDRAFT_160263 [Dictyostelium purpureum]
          Length = 265

 Score =  170 bits (431), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 59/179 (32%), Positives = 99/179 (55%), Gaps = 4/179 (2%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           IDL   ++    T+ ++ ++   +R GR  P +LD + VE    ++ L  +A VTV +P 
Sbjct: 88  IDLSRYQEASMKTLDYISREYGNIRFGRAGPELLDRINVETPNGNLLLPHIAMVTVKDPL 147

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
            L ++++D   V +VE+ I  + LGL P V G V+++ +P+ T + R  L+K  +  +E 
Sbjct: 148 TLNITLYDTSFVKNVEKAIQTAGLGLMPQVSGTVIKVSLPKPTNDLRQKLIKQVNTISED 207

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +K+S+R  R+D MD LK  +      +D    LE +IQK+ D  + NI    + K KEI
Sbjct: 208 AKVSIRRHRKDAMDSLKNYK----LRKDDEKLLEKNIQKMIDDYVGNITKLTDSKLKEI 262


>gi|147799481|emb|CAN77406.1| hypothetical protein VITISV_026196 [Vitis vinifera]
          Length = 222

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 44/119 (36%), Positives = 75/119 (63%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +++K+RM  TI  ++ +  ++RTGR +P++LD V+VE YG+ V L  +A ++  +   L+
Sbjct: 96  KDVKERMEKTIETVRTNFNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLL 155

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V  +DK  +  +E+ I  S+LGL P  +G+V+R+ +P+ T ERR  L KV     E+ K
Sbjct: 156 VQPYDKSSLKVIEKAIVSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGK 214


>gi|149641896|ref|XP_001512325.1| PREDICTED: similar to mitochondrial ribosome recycling factor
           [Ornithorhynchus anatinus]
          Length = 241

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/184 (30%), Positives = 99/184 (53%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ +   +   +  LK D       R S   LD + V        LNQ+A +++ 
Sbjct: 59  EDIINLEEVNRDLQTVMEALKDDFNKNLNIRTSAGALDHISVPTEDGKFSLNQLAQISMK 118

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++ +  E  A+  + I ES + LNP V+G ++R+P+P+ T E R  LVK+A  
Sbjct: 119 SPQLVLVNMANFPECTAAAIKAIRESGMNLNPEVDGTIIRVPIPKVTREHREMLVKLAKQ 178

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +R + M+ LKKS+   K +ED +  +E  I ++ D  +  +D     K 
Sbjct: 179 NTNKAKESLRKVRTNAMNKLKKSK--DKVAEDTIRLIEKKIGQMADDMVAEMDKQLAVKT 236

Query: 181 KEIM 184
           KE++
Sbjct: 237 KELL 240


>gi|293363510|ref|ZP_06610266.1| ribosome recycling factor [Mycoplasma alligatoris A21JP2]
 gi|292552859|gb|EFF41613.1| ribosome recycling factor [Mycoplasma alligatoris A21JP2]
          Length = 183

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 90/171 (52%), Gaps = 3/171 (1%)

Query: 16  DTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEM 75
             I+  K ++  + TGR +P ++  V+V  Y +  PL +++ ++V EP+ L++  +D   
Sbjct: 16  KAINHYKFELSKMSTGRANPQVIKGVRVNYYETLTPLEELSTISVPEPQQLLIKPYDSSS 75

Query: 76  VASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRD 135
              + + +  +NLG+ P+ EG  +R+  P  T +RR  LVK      E +KI +RN R++
Sbjct: 76  TKEIVKALTAANLGILPVDEGHQVRMTFPTLTTDRRKELVKSLSKLTEGAKIGIRNARQE 135

Query: 136 GMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
               +K      + SED+     + IQK  D  ++ ++   +EK+ ++M  
Sbjct: 136 VNKAIKA---DEELSEDIEKRYLDAIQKEVDKYMELVNEITKEKESDLMKI 183


>gi|114690061|ref|XP_521248.2| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 gi|332861573|ref|XP_003317710.1| PREDICTED: ribosome-recycling factor, mitochondrial-like [Pan
           troglodytes]
          Length = 262

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I   K +       R SP  LD + V      + LNQ+  ++V 
Sbjct: 80  EDIINLEEVNEEMKSVIEAHKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQIRQISVK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E   +  + I ES + LNP VEG ++R+P+P+   E R  LVK+A  
Sbjct: 140 LPQLILVNMASFPECTVAAIKAIRESGMNLNPEVEGTLIRVPIPQVIREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+  +  + M+ LKKS+ +   SED +   E  I ++ D T+  +      K 
Sbjct: 200 NTNKAKYSLLKVCTNAMNKLKKSKDT--VSEDTIRLTEKQISQMADDTVAELYRHLAVKN 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|325181721|emb|CCA16176.1| ribosomerecycling factor putative [Albugo laibachii Nc14]
          Length = 267

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 7/186 (3%)

Query: 2   NQVIDLQNIKDR----MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVAN 57
           +   D++ +K +    M   I    + +  +R G+    + D V V+AYG  VPL Q+A 
Sbjct: 82  SDEFDVEELKSKTRRNMNGAILNFTRQLCQMRPGKADGGIFDTVHVQAYGQSVPLPQLAQ 141

Query: 58  VTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKV 117
           V V     L V+V+D+ ++  V++ I + N   +   E   L +  P+ ++E R  L K 
Sbjct: 142 VAVTGAYSLSVNVYDQSLLQEVKQTIAKINACYSIREEISSLEVTFPKMSKETRSELSKA 201

Query: 118 AHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFE 177
               AE+++  VR +R+D M+ LK   KS + +ED +  +++ IQK+TD  I  IDS   
Sbjct: 202 VKKQAEQARSHVRRVRQDSMNILK---KSKEITEDDLKEIKDAIQKVTDQCISEIDSLLA 258

Query: 178 EKKKEI 183
           +K+K++
Sbjct: 259 QKEKDL 264


>gi|195377904|ref|XP_002047727.1| GJ11766 [Drosophila virilis]
 gi|194154885|gb|EDW70069.1| GJ11766 [Drosophila virilis]
          Length = 260

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 95/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++I+L ++  +M  ++  +K D +   + R +   +D ++++  G+   L ++A ++ 
Sbjct: 76  LRELINLDSLNAQMEKSVLQMKDDFIKNLSLRSTSGAIDSLRIKVDGAEHELQELAQISR 135

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +VV++    + +  V R I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 136 KNPKTIVVNMIAFPQTIPDVLRAIEKSGMNLNPQQDGTTLFIPIPKVTKEHREHLSKNAK 195

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R+I+      ++K +K     +D   + +  +  I D  I   D     K
Sbjct: 196 AMFIKYRDAIRDIQ---NTQIRKLKKQTDIGKDDAFAAQTQVTAIADKYIAEADKLLASK 252

Query: 180 KKEIM 184
           +KE++
Sbjct: 253 QKELL 257


>gi|301094211|ref|XP_002997949.1| ribosome-recycling factor, putative [Phytophthora infestans T30-4]
 gi|262109735|gb|EEY67787.1| ribosome-recycling factor, putative [Phytophthora infestans T30-4]
          Length = 259

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 2/177 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+     M   +    + +  +R GR    + D + V AYG HVPL QVA V V     L
Sbjct: 82  LEKANKNMNGAVVNFTRALSQMRPGRADAGIFDELHVPAYGQHVPLAQVAQVAVAGTHAL 141

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V+V+D  ++  V++ I  +N   +   +   L I  P+ ++E R  L+K     AE+++
Sbjct: 142 SVTVYDPSLMPDVKKAIEGTNAVYSVREDVSSLEISFPKMSKETRADLLKATKKQAEQAR 201

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
             VR +R+D M+H KK + +   SED V   +  IQK TDS I  ID     K+K++
Sbjct: 202 QHVRRVRQDAMNHAKKLKDA--VSEDDVEVQKERIQKATDSAIAEIDKLLAAKEKDL 256


>gi|281205054|gb|EFA79247.1| hypothetical protein PPL_07665 [Polysphondylium pallidum PN500]
          Length = 369

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/180 (32%), Positives = 107/180 (59%), Gaps = 4/180 (2%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +DL  +K     T+ FL++    +R GR  P +LDL+ VE     + +NQ+A VT+ +P 
Sbjct: 190 VDLNTMKSSCDATVDFLRRGFGNIRCGRTGPELLDLITVETPNGPMSMNQIAMVTIKDPL 249

Query: 65  MLVVSVWDKEMVASVERGIHE-SNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
            L ++++D  ++  VE+ +   S+LG++P ++ Q +++ +P+ T+E R  L+K  +  +E
Sbjct: 250 TLHLTLFDPSLLKHVEKALRSRSDLGMSPQIQDQFIKLTLPKPTQELRQNLIKSVNNLSE 309

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++K+S+R  R++GMD +KK  K  K  E     ++ ++QKITD  I  +    + K KEI
Sbjct: 310 QAKVSIRRHRKEGMDLIKKKYKLIKDDE---QKIDKNVQKITDDYIATLTKLTDAKIKEI 366


>gi|325278093|ref|ZP_08143609.1| ribosome recycling factor [Pseudomonas sp. TJI-51]
 gi|324096770|gb|EGB95100.1| ribosome recycling factor [Pseudomonas sp. TJI-51]
          Length = 133

 Score =  165 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 56/127 (44%), Positives = 85/127 (66%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  L +++  +RTGR  PS+LD V+V A+GS +PLNQVA +TV + R L 
Sbjct: 7   KDAQERMTKSLEALARNLAAIRTGRAHPSILDTVRVTAWGSEMPLNQVAAITVEDARTLK 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +   DK + A++E+ I  S+LGLNP   G  +R+P+P  TEE R    K A A AE +K+
Sbjct: 67  IVAHDKNLSAAIEKAILTSDLGLNPSSAGTTIRVPMPALTEETRKGYTKQASAVAEDAKV 126

Query: 128 SVRNIRR 134
           +VRN+RR
Sbjct: 127 AVRNVRR 133


>gi|198467224|ref|XP_001354314.2| GA18189 [Drosophila pseudoobscura pseudoobscura]
 gi|198149556|gb|EAL31367.2| GA18189 [Drosophila pseudoobscura pseudoobscura]
          Length = 261

 Score =  165 bits (419), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 97/185 (52%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++I+L ++  +M  ++  +K+D +   + R +   +D ++++  G    L ++A ++ 
Sbjct: 77  LREIINLDSLNTQMERSVQQMKEDFIKHLSLRSTSGAIDTLRIKVDGDEHELQELAQISR 136

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V++    + +  V R I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 137 KNPKTIIVNMIAFPQTIPDVLRAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 196

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++RN++    DH++K +K     +D   + +  +  I D  I   D     K
Sbjct: 197 ALFVKYRDAIRNVQ---NDHIRKLKKQPDVGKDDAFAAQTQVTAIGDKFIAEADKLLASK 253

Query: 180 KKEIM 184
           +KE++
Sbjct: 254 QKELL 258


>gi|194751343|ref|XP_001957986.1| GF10686 [Drosophila ananassae]
 gi|190625268|gb|EDV40792.1| GF10686 [Drosophila ananassae]
          Length = 255

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 96/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++++   +  +M  ++S +K D +   + R +   +D ++V+  G    L ++A ++ 
Sbjct: 72  LREILNFDGLNSQMQKSVSQMKDDFVKHLSLRSTSGAIDTLRVKVDGQEHELQELAQISR 131

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V++    + +  V + I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 132 KNPKTIIVNMIAFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 191

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++   M+H++K +K  +  +D   + +  +  I D  I   D     K
Sbjct: 192 ALFVKYRDAIRGVQ---MEHIRKLKKQPELGKDDAFAAQAQVTAIADRYIGEADKLLATK 248

Query: 180 KKEIM 184
           +KE++
Sbjct: 249 QKELL 253


>gi|270643372|ref|ZP_06222161.1| ribosome recycling factor [Haemophilus influenzae HK1212]
 gi|270317279|gb|EFA28844.1| ribosome recycling factor [Haemophilus influenzae HK1212]
          Length = 127

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 55/127 (43%), Positives = 80/127 (62%)

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALV 115
           ANV   + R L V+V+D+ ++++VE+ I  S+LGLNP   G  +RIP+P  TEERR  L+
Sbjct: 1   ANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRIPLPPLTEERRRDLI 60

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           K+     E+ K++VRN+RRD  D +K   K  + SE+     E +IQKITD  IK +D  
Sbjct: 61  KIVKGEGEQGKVAVRNVRRDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEV 120

Query: 176 FEEKKKE 182
             +K+KE
Sbjct: 121 LADKEKE 127


>gi|28493413|ref|NP_787574.1| ribosome recycling factor [Tropheryma whipplei str. Twist]
 gi|28572476|ref|NP_789256.1| ribosome recycling factor [Tropheryma whipplei TW08/27]
 gi|44888329|sp|Q83G73|RRF_TROWT RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|44888330|sp|Q83HZ5|RRF_TROW8 RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|28410608|emb|CAD66994.1| ribosome recycling factor [Tropheryma whipplei TW08/27]
 gi|28476454|gb|AAO44543.1| ribosome recycling factor [Tropheryma whipplei str. Twist]
          Length = 181

 Score =  164 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 6/179 (3%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
           ++ +RM  TI  LK+  +++ +GRV+    + V V+  G+ VPL  +A++ VL    +VV
Sbjct: 8   DVSERMNKTIELLKEQFLSIHSGRVNSGQFEKVMVDCEGASVPLVSLASIRVLNANTIVV 67

Query: 69  SVWDKEMVASVERGIHE-SNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           + +D  +++ ++R +    N+G  P  +G+ ++I +P+ TE RR   VK A   AE++++
Sbjct: 68  TPYDSALLSQIDRALRNVPNIG-TPGNDGECIKIVMPQLTEARRHEYVKQARVKAEEARV 126

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           S RNIRR     L         ++D +   E ++ K+T   I  +D     K+ E++  
Sbjct: 127 SARNIRRKARASLDAM----GLAKDEIVRREKELDKLTKDVISVVDDLLRHKESELLRL 181


>gi|195429112|ref|XP_002062608.1| GK17631 [Drosophila willistoni]
 gi|194158693|gb|EDW73594.1| GK17631 [Drosophila willistoni]
          Length = 257

 Score =  164 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 94/185 (50%), Gaps = 3/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++I+L  +  +M  ++  +K D +   + R +   +D ++++  G+   L ++A ++ 
Sbjct: 72  LREIINLDQLNTQMEKSVQQMKDDFIKHLSLRSTSGAIDSLRIKVDGNVHELQELAQISR 131

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +++++    + +  V R I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 132 KNPKTIIINMIAFPQTIPDVLRAIEKSGMNLNPQQDGTTLFIPIPKVTKEHREHLSKNAK 191

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++ D +  LKK   +    +D     +N +  I D  I   D     K
Sbjct: 192 ALYIKYRDAIRQVQNDHIRKLKKQ--ADDIGKDDAFKAQNQVTAIADKYIAEADKLLATK 249

Query: 180 KKEIM 184
           +KE++
Sbjct: 250 QKELL 254


>gi|262340905|ref|YP_003283760.1| ribosome recycling factor [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272242|gb|ACY40150.1| ribosome recycling factor [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 184

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 67/188 (35%), Positives = 110/188 (58%), Gaps = 6/188 (3%)

Query: 1   MNQVIDLQ-NIKDRMGDTISFLKKDMMTLRTGRVS-PSMLDLVKVEAYGSHVPLNQVANV 58
           M+++ D+  + K  M   +  LK+++  +R G  S  S+L+ +K++ YGS   L +VAN+
Sbjct: 1   MDELNDIFFSCKKDMEKILKQLKEEIHRIRLGSKSVASILEKIKIKCYGSSFLLIEVANI 60

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           TV++   + +  WD+ +V+ +++ I ++NLG  P  +G+ + I +P  TEE R  L+K  
Sbjct: 61  TVVDNMNITIHPWDRSIVSYIDKAIIDANLGFMPTNKGESIHIHLPIITEEGRKNLMKKI 120

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            +  E +KI +RN+R+    H+KK +     SED   S EN IQKIT   I  ID FF  
Sbjct: 121 KSQTEHAKILIRNVRKKNNQHIKKLK----ISEDFSKSGENRIQKITSEYIHQIDDFFLY 176

Query: 179 KKKEIMHF 186
           K+KEI+  
Sbjct: 177 KEKEILRI 184


>gi|148670215|gb|EDL02162.1| mCG10533, isoform CRA_b [Mus musculus]
          Length = 264

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 3/181 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ + + M   +  LK +       R +   LD + V      V L+Q+  +++ 
Sbjct: 80  EDIISLEEVDEDMKSVMEALKDNFNRTLNIRTASGSLDHITVVTADGKVALSQIGQISMK 139

Query: 62  EPRMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I  S + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQVILVNMAIFPECTAAAIKAIRGSRMNLNPEVEGTLIRVPIPKLTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K ++R +  + M+ LKKS+   K SED +  +E  I +I D T+  +D     + 
Sbjct: 200 NTNKAKENLRKVCTNAMNKLKKSK--DKTSEDTIRLMEKQISQIADDTVAELDQHLAARP 257

Query: 181 K 181
           K
Sbjct: 258 K 258


>gi|26554405|ref|NP_758339.1| ribosome recycling factor [Mycoplasma penetrans HF-2]
 gi|44888332|sp|Q8EUH0|RRF_MYCPE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|26454415|dbj|BAC44743.1| ribosome recycling factor [Mycoplasma penetrans HF-2]
          Length = 183

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M   I  +    +    + +L  +   +++GR +P +LD V VEAYG    L ++AN+ V
Sbjct: 1   MEWKIYKEEFDKKAEVKLEWLDSEFNKIKSGRPNPKILDHVMVEAYGDKSKLFEIANMQV 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           +E + +VV  +DK ++  +   I + NLGL+  V+   LRI  P  TEE R A VK    
Sbjct: 61  VEGKQIVVKPYDKTLLHDINSAIQKENLGLSVQVDADSLRIIFPSPTEETRKASVKKVKE 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           ++E+ K+ +RNIR+D    +K      +  ED +   E D+ K+T      +D  F EK+
Sbjct: 121 FSEQVKVEIRNIRKDVHHKIK---DDKELREDELKWYEEDLDKLTREWNAKVDKAFAEKE 177

Query: 181 KEIMHF 186
           KE+M  
Sbjct: 178 KELMTI 183


>gi|119632273|gb|EAX11868.1| hCG1980694, isoform CRA_a [Homo sapiens]
          Length = 262

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/184 (28%), Positives = 93/184 (50%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I   K +         SP  LD + V      + LNQ+  ++V 
Sbjct: 80  EDIINLEEVNEEMKSVIEARKDNFNKTLNIGTSPGSLDKIAVVTADGKLALNQIRQISVK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E   +  + I ES + LNP VEG ++R+P+P+   E R  LVK+A  
Sbjct: 140 LPQLILVNMASFPEFTVAAIKAIRESGMNLNPEVEGTLIRVPIPQVIREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K S+R +  + M+ LKKS+ +   SE  +   E  I ++ D T+  +      K 
Sbjct: 200 NTNKAKYSLRKVCTNAMNKLKKSKDT--VSEGTIRLTEKQISQMADDTVAELYRHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|300214368|gb|ADJ78784.1| Ribosome-recycling factor (RRF) (Ribosome-releasing factor)
           [Lactobacillus salivarius CECT 5713]
          Length = 132

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/131 (45%), Positives = 91/131 (69%)

Query: 55  VANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLAL 114
           +A ++V E R+L+V+ +DK  + ++E  I  S+LG+ P+ +G  +R+ +P+ TEERR  L
Sbjct: 1   MAQISVPEARVLLVTPYDKSSLKNIEHAIMASDLGIAPMNDGTAIRLVIPQLTEERRKEL 60

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
            K   A +E  K++VRNIRRD MD LKK++K+G  +ED +  LEN  QK+TD +IKNID 
Sbjct: 61  AKQVKAVSETGKVAVRNIRRDMMDALKKAQKNGDLTEDDLRDLENQAQKVTDESIKNIDK 120

Query: 175 FFEEKKKEIMH 185
             E+K+KE++ 
Sbjct: 121 ITEDKEKEVLE 131


>gi|298714900|emb|CBJ27656.1| ribosome recycling factor [Ectocarpus siliculosus]
          Length = 271

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 70/187 (37%), Positives = 101/187 (54%), Gaps = 3/187 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           ++ +  +   K R    +  L +D   LR G+  P MLD V+VE+YGS   L  VA  ++
Sbjct: 87  LDDIAGIPESKARFDKVLQGLTRDFQGLRGGKTDPGMLDNVRVESYGSMTNLASVAQASM 146

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ-VLRIPVPETTEERRLALVKVAH 119
             P+++V+SV+D  M   VE  I E  +GLNP  EGQ  + +P+P+ T+E R A+ KVA 
Sbjct: 147 KGPQLIVLSVYDPGMTKVVEDAIRECGMGLNPNSEGQGQVHVPIPKPTKESREAVAKVAA 206

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
            +AEKSK+ VR IR   +D +KK  K     ED V     +I + T      I    E+K
Sbjct: 207 KHAEKSKVVVRGIRHKILDQIKK--KKDSFPEDDVHMRIKEIDQCTKDAEAGIAGMLEKK 264

Query: 180 KKEIMHF 186
           K EI+  
Sbjct: 265 KAEILTV 271


>gi|194867771|ref|XP_001972146.1| GG15364 [Drosophila erecta]
 gi|190653929|gb|EDV51172.1| GG15364 [Drosophila erecta]
          Length = 254

 Score =  161 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 94/185 (50%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++++   +  +M  ++  +K+D +   + R +   +D ++++  G    L ++A ++ 
Sbjct: 71  LREILNFDGLNSQMQKSVMQMKEDFVKHLSLRSTSGAIDTLRIKVDGQEHELQELAQISR 130

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V++    + +  V + I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 131 KNPKTIIVNMIGFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 190

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++    + ++K +K  +  +D   + +  +  I D  I   D     K
Sbjct: 191 ALFVKYRDAIRGVQ---NEQIRKLKKQPELGKDDAFAAQAQVTAIADRFISEADKLLASK 247

Query: 180 KKEIM 184
           +KE++
Sbjct: 248 QKELL 252


>gi|32491138|ref|NP_871392.1| hypothetical protein WGLp389 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173140|sp|Q8D2G5|RRF_WIGBR RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|25166345|dbj|BAC24535.1| frr [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 185

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 59/171 (34%), Positives = 108/171 (63%), Gaps = 2/171 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N++   +N   RM  +I F KK++  +RT RVSPS+++ + +  YG+ VPL++++N+  
Sbjct: 2   INEIY--ENSNSRMKKSIDFFKKNISKIRTNRVSPSLIENIYINCYGTSVPLSKLSNILS 59

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            +  +L ++V+D  ++  +E+ I  S+LG+NP ++   +RI  P+ TE RR  L+K+ + 
Sbjct: 60  EKSNILKINVFDNNIIKKIEQAILSSDLGVNPQIQENYIRIEFPKLTEARRFELIKLINK 119

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
            AE++ IS+RNIRRD  + +KK  K+    +D     +  IQ +T+S I++
Sbjct: 120 EAEQNIISIRNIRRDANEKIKKLIKAKTIGKDEDKKFQEVIQNLTNSRIED 170


>gi|195490897|ref|XP_002093333.1| GE20827 [Drosophila yakuba]
 gi|194179434|gb|EDW93045.1| GE20827 [Drosophila yakuba]
          Length = 254

 Score =  160 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 94/185 (50%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++++   +  +M  ++  +K+D +   + R +   +D ++++  G    L ++A ++ 
Sbjct: 71  LREILNFDGLNSQMQKSVMQMKEDFVKHLSLRSTSGAIDTLRIKVDGQEHELQELAQISR 130

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V++    + +  V + I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 131 KNPKTIIVNMIGFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 190

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++    + ++K +K  +  +D   + +  +  I D  I   D     K
Sbjct: 191 ALFVKYRDAIRGVQ---NEQIRKLKKQPELGKDDAFAAQAQVTAIADRFISEADKLLASK 247

Query: 180 KKEIM 184
           +KE++
Sbjct: 248 QKELL 252


>gi|260362405|ref|ZP_05775360.1| ribosome recycling factor [Vibrio parahaemolyticus K5030]
 gi|308113970|gb|EFO51510.1| ribosome recycling factor [Vibrio parahaemolyticus K5030]
          Length = 124

 Score =  160 bits (406), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 54/124 (43%), Positives = 77/124 (62%)

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            R L ++V+DKE+   VE+ I  S+LGLNP+  G ++R+P+P  TEERR  LVK+    A
Sbjct: 1   ARTLAITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEA 60

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E  +++VRNIRRD  + LK   K  + SED     + +IQK+TD  +K ID     K+KE
Sbjct: 61  EGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKE 120

Query: 183 IMHF 186
           +M  
Sbjct: 121 LMEV 124


>gi|24661488|ref|NP_648302.2| CG4447 [Drosophila melanogaster]
 gi|7294968|gb|AAF50297.1| CG4447 [Drosophila melanogaster]
 gi|201065901|gb|ACH92360.1| FI06490p [Drosophila melanogaster]
          Length = 254

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 95/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++++   +  +M  ++  +K+D +   + R +   +D ++++  G    L ++A ++ 
Sbjct: 71  LREILNFDGLNSQMQKSVMQMKEDFVKHLSLRSTSGAIDTLRIKVDGQEHELQELAQISR 130

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V++    + +  V + I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 131 KNPKTIIVNMIGFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 190

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++    +H++K +K  +  +D   + +  +  I D  I   D     K
Sbjct: 191 ALFVKYRDAIRGVQ---NEHIRKLKKQPELGKDDAFAAQAQVTAIADRFISEADKLLASK 247

Query: 180 KKEIM 184
           +KE++
Sbjct: 248 QKELL 252


>gi|72063711|ref|XP_792740.1| PREDICTED: similar to Mitochondrial ribosome recycling factor
           [Strongylocentrotus purpuratus]
 gi|115959633|ref|XP_001188854.1| PREDICTED: similar to Mitochondrial ribosome recycling factor
           [Strongylocentrotus purpuratus]
          Length = 188

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/184 (30%), Positives = 100/184 (54%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + ++DL ++K+ M + I  LKKD  +  T R S   LD + V       PLNQ+  +T  
Sbjct: 5   DDILDLNDVKENMQNAIDALKKDYTSTLTIRTSQGALDHLLVITPDGKFPLNQLGQMTSK 64

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
               + V++ +  +   +  + I ++ + LNP +EG V+++P+P+ T+E R  LVK A  
Sbjct: 65  SSSSITVNLTNFPQATEAAAKAIRDAGMNLNPKIEGSVIQVPIPKVTKEHRENLVKSAKG 124

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             +K+K+++R  R   +  ++K  K G  S+D +  LE  I ++TD+   + D  F  K 
Sbjct: 125 MCDKAKVNIRGARSKYISLVRK-HKEG-TSKDTIFRLEQQIHQVTDTFNDSADKLFSLKT 182

Query: 181 KEIM 184
           KE++
Sbjct: 183 KELL 186


>gi|47458890|ref|YP_015752.1| ribosome recycling factor [Mycoplasma mobile 163K]
 gi|60390256|sp|Q6KIN5|RRF_MYCMO RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|47458218|gb|AAT27541.1| ribosome recycling factor [Mycoplasma mobile 163K]
          Length = 183

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 89/179 (49%), Gaps = 3/179 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
             +K  M   +      +  +  G+ +P ++  +K   Y   + + ++A ++V E + ++
Sbjct: 8   NKVKLEMEKAVQTYSNQIAKISAGKANPKLISGIKFIYYDEPMSIEEMAAISVPEAQQIL 67

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           +  +D +   ++   +++ N  +  + EG  +R+  P  T ERR  LVK      E +K+
Sbjct: 68  IKPYDIKTTKNIIESLNKMNYDMQIVDEGAQVRLKFPALTTERRKELVKQLVKLNESAKV 127

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++R +R+D    +K   K  + SED      ++IQK+TD  I  I+   ++K+KE+M  
Sbjct: 128 AIRQVRQDENKLIK---KDEELSEDEQKKYLDEIQKLTDKYIFKIEELNKDKEKELMTI 183


>gi|66350822|emb|CAI95712.1| novel protein similar to mitochondrial ribosome recycling factor
           isoform 1 (LOC286423) [Homo sapiens]
          Length = 262

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 3/184 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I   K +         SP  LD + V      + LNQ+  ++V 
Sbjct: 80  EDIINLEEVNEEMKSVIEARKDNFNKTLNIGTSPGSLDKIAVVTADGKLALNQIRQISVK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E   +  + I ES + LNP VEG ++R+P+P+   E R  LVK+A  
Sbjct: 140 LPQLILVNMASFPEFTVAAIKAIRESGMNLNPEVEGTLIRVPIPQVIREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+  S+R +  + M+ LKKS+ +   SE  +   E  I ++ D T+  +      K 
Sbjct: 200 NTNKATYSLRKVCTNAMNKLKKSKDT--VSEGTIRLTEKQISQMADDTVAELYRHLAVKT 257

Query: 181 KEIM 184
           KE++
Sbjct: 258 KELL 261


>gi|281337698|gb|EFB13282.1| hypothetical protein PANDA_004028 [Ailuropoda melanoleuca]
          Length = 238

 Score =  159 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 53/161 (32%), Positives = 88/161 (54%), Gaps = 3/161 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ + + M   +  LK +       R SP  LD + V      + LNQ+  +++ 
Sbjct: 80  EDIISLEEVDEEMKSVMEALKDNFNKTVNIRTSPGSLDHITVVTADGKLALNQIGQISMK 139

Query: 62  EPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V+ V   E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQLILVNMVSFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
              K+K S+R +R + M+ LKKS+   K SED +  +E  +
Sbjct: 200 NTNKAKDSLRKVRTNAMNKLKKSK--DKVSEDTIRLIEKQV 238


>gi|196003386|ref|XP_002111560.1| hypothetical protein TRIADDRAFT_55709 [Trichoplax adhaerens]
 gi|190585459|gb|EDV25527.1| hypothetical protein TRIADDRAFT_55709 [Trichoplax adhaerens]
          Length = 247

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/184 (29%), Positives = 103/184 (55%), Gaps = 4/184 (2%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           + +I    +K ++   +  L ++   +   R++P  L+ + V+     VPL Q+  VT  
Sbjct: 65  DDMISFSEMKIKLEGIVDGLAREYSNILVSRITPENLNRISVQTNDGKVPLKQLGQVTST 124

Query: 62  EPRMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++L +S+    E+V +    I  + L LNPIV+G  L++P+P+ T+E+R  +VK A +
Sbjct: 125 SPQLLHISLAAFPEVVNNAAIAIRNAGLNLNPIVDGPSLKVPIPKMTKEQREKIVKTAKS 184

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             +K+K+++R +R++ M+ LKK       SED V   ++ IQ +TD+    +DS F  K 
Sbjct: 185 SCDKAKVNIRRVRQNYMNDLKKL---KGVSEDDVYDTKDKIQAMTDNYSNKLDSLFTTKS 241

Query: 181 KEIM 184
            +++
Sbjct: 242 DDVL 245


>gi|91077948|ref|XP_966879.1| PREDICTED: similar to mitochondrial ribosome recycling factor
           [Tribolium castaneum]
 gi|270002287|gb|EEZ98734.1| hypothetical protein TcasGA2_TC001287 [Tribolium castaneum]
          Length = 262

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 95/184 (51%), Gaps = 4/184 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           ++++++++++K +M   +  LK+D +   + R +   ++ + VE  G    L ++A +  
Sbjct: 78  LSEIVNVESLKTQMQKAVDLLKEDYVKHLSVRTTTGSVESIPVELDGKTHSLQELAQIIR 137

Query: 61  LEPRMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ LV+++    + + +  + I +S + LNP  +G  L IP+P+ T E R  L K A 
Sbjct: 138 KNPKTLVINMSVFPQAIPAALKAIEKSGMNLNPQQDGTTLFIPIPKVTTEHRENLAKSAK 197

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
               K +  +R+++      +K  +K  K SEDM  + E  I  I D+ I   +   E K
Sbjct: 198 TMFIKCRDGIRDVQ---NKQVKSLKKKDKVSEDMARNSEQQIVAIADAYIAEAEKILESK 254

Query: 180 KKEI 183
           +KE+
Sbjct: 255 QKEL 258


>gi|206896074|ref|YP_002247089.1| ribosome recycling factor [Coprothermobacter proteolyticus DSM
           5265]
 gi|254809505|sp|B5Y8J2|RRF_COPPD RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|206738691|gb|ACI17769.1| ribosome recycling factor [Coprothermobacter proteolyticus DSM
           5265]
          Length = 186

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 108/185 (58%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +    +  ++    TI+ +   + T+R  RVSP++L+ V VE  G+   L+++A V  
Sbjct: 1   MKEHEITRQAREHFQKTINTMSDQLSTVRASRVSPAILEPVTVEYEGAKYKLSELAMVVA 60

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            + R L++  WD  M+ ++ R + ++N+G NP  +G+ +++  P  ++ERR  L ++   
Sbjct: 61  QDARTLIIEPWDVSMIPAISRSLQKANVGANPSDDGKRIKLVFPSLSQERREELARLVDK 120

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y E+++I++RNIRR+ +D +K   K  + SED    ++N++QK  +   K ++   + K+
Sbjct: 121 YLEEARIALRNIRREYIDEVKSKEKKKELSEDESRRIQNELQKAFEEYEKQMEQICQRKR 180

Query: 181 KEIMH 185
           KEIM 
Sbjct: 181 KEIME 185


>gi|195129487|ref|XP_002009187.1| GI13908 [Drosophila mojavensis]
 gi|193920796|gb|EDW19663.1| GI13908 [Drosophila mojavensis]
          Length = 266

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 97/184 (52%), Gaps = 4/184 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++I+L ++  +M  ++  +K+D +   + R +   +D ++++  G+   L ++A ++ 
Sbjct: 82  LRELINLDSLNAQMEKSVLQMKEDFIKNLSLRSTSGAIDTLRIKVDGAEHELQELAQISR 141

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V++    + +  V R I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 142 KNPKTIIVNMIAFPQTIPDVLRAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRELLSKNAK 201

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R+I+      ++K +K    ++D V + +  +  I D  I   D     K
Sbjct: 202 ALFIKYRDAIRDIQ---NAQIRKLKKQTDVAKDDVFAAQTQVTAIADKYIAEADKLLVSK 258

Query: 180 KKEI 183
           +KE+
Sbjct: 259 QKEL 262


>gi|27904717|ref|NP_777843.1| ribosome recycling factor [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|44888331|sp|Q89AP1|RRF_BUCBP RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|27904114|gb|AAO26948.1| ribosome recycling factor [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 183

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/174 (32%), Positives = 98/174 (56%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
            +M   +      + TLR+ R SPS+LD + ++  G  + L +++N+ V     L ++++
Sbjct: 10  SKMDHCVHMFVNQLNTLRSSRASPSILDTILIDYLGQKIQLKKLSNIIVENVNTLRITLF 69

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D ++  +VE+ I  S L L PI      +I +P  TEERRL L+K+A   AE S+I +RN
Sbjct: 70  DPKIKNNVEKAIISSKLDLIPIFINNYFQIKIPVLTEERRLQLIKLAKKMAENSRICIRN 129

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           IRR   + +K   K    S D    L++++Q IT+S ++ I+    +K+K+++ 
Sbjct: 130 IRRLSNEKIKLFLKDKIISSDKERRLQHEVQDITNSYMEKINVILSKKEKDLLK 183


>gi|320165435|gb|EFW42334.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 413

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 8/177 (4%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++ R+  T  FL   +  LRTGR +P+MLD VKV       PLN+   V+V +   L
Sbjct: 242 LDEVRTRLSTTAKFLTTALAKLRTGRATPAMLDSVKVRGR----PLNEHGMVSVKDASTL 297

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           V+SV D+ ++  +ER I E++L +NP+ +G+ ++  +P+ T+E R  L K+A    E+ K
Sbjct: 298 VISVNDETVLDDIERAIREADLNINPVRDGKFVKCVIPKMTQEFREKLTKMAREQGEEYK 357

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           I +R +R   +   KKS      S   V   E D+ K  D   K ID+    K KEI
Sbjct: 358 IRLRRVRAKAITDAKKS----GVSTSEVFRFEKDVGKAFDDQSKQIDTTVSAKIKEI 410


>gi|240047787|ref|YP_002961175.1| Ribosome recycling factor [Mycoplasma conjunctivae HRC/581]
 gi|239985359|emb|CAT05372.1| Ribosome recycling factor [Mycoplasma conjunctivae]
          Length = 186

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 4/170 (2%)

Query: 17  TISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMV 76
               L K+   +  GR +P ++  ++V+ YG+  P+N++AN++V     L+V  +D  ++
Sbjct: 21  VFDHLDKNFNKINIGRANPQIISHIRVDYYGAPTPINEIANISVPSALQLLVKPYDISLI 80

Query: 77  ASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDG 136
            S+   +    +      E   +R+  PE T E+R  LVK    Y E++K+ +R IR+D 
Sbjct: 81  NSITSTLVAHKIEAQIQKEANQIRLVFPELTTEKRKELVKSIKKYEEEAKVKIRLIRQDV 140

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
              +KK       SED   +  N IQK  DS IK ID  FEEK K +++ 
Sbjct: 141 NKLIKK----EDLSEDEEKNYLNQIQKTIDSKIKEIDKIFEEKSKLLLNI 186


>gi|195020953|ref|XP_001985300.1| GH14583 [Drosophila grimshawi]
 gi|193898782|gb|EDV97648.1| GH14583 [Drosophila grimshawi]
          Length = 262

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 96/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++I+L  +  +M  ++  ++ D +   + R +   +D ++++  G+   L Q+A ++ 
Sbjct: 78  LRELINLDGLNAQMEKSVLQMRDDFIKNLSLRSTSGAIDTLRIKVDGAEHELQQLAQISR 137

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +V+++    + +  V R I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 138 KNPKTIVINMIAFPQTIPDVLRAIEKSGMNLNPQQDGTTLFIPIPKVTKEHREHLSKNAK 197

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R+I+      ++K +K    ++D V + +  +  I D  I   D     K
Sbjct: 198 ALFIKHRDAIRDIQ---NAEIRKLKKQTDIAKDDVFAAQTQLTAIADKYIGEADKLLASK 254

Query: 180 KKEIM 184
           +KE++
Sbjct: 255 QKELL 259


>gi|297832754|ref|XP_002884259.1| hypothetical protein ARALYDRAFT_317013 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330099|gb|EFH60518.1| hypothetical protein ARALYDRAFT_317013 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 238

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 26/176 (14%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
              +M   I  L +D+  LRTGR +P MLD + VE  G  +PLN +A V+VL+P+ L V+
Sbjct: 88  ASSQMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKTLSVN 147

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +D + V  +E+ I  S LGLNP ++GQ L   +P      +                  
Sbjct: 148 PYDPDTVKELEKAIVASPLGLNPKLDGQRLVASIPADIFFGQ------------------ 189

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
                  +D +KK+       +D V  LE ++ ++T   +K+ +   + K+KEI  
Sbjct: 190 ------ALDTIKKA--GSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEITE 237


>gi|260810957|ref|XP_002600189.1| hypothetical protein BRAFLDRAFT_204166 [Branchiostoma floridae]
 gi|229285475|gb|EEN56201.1| hypothetical protein BRAFLDRAFT_204166 [Branchiostoma floridae]
          Length = 206

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 3/185 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           ++V D++ ++ +M   +  LK++ +   + R S   LD + V+      PLN +  + + 
Sbjct: 24  SEVTDIETVRGKMQKALDALKEEYVKNLSLRTSVGSLDSISVQTVNGRFPLNHLGQIVMK 83

Query: 62  EPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P+M  V+ V   + + SV + I +S + LNPI EG V+++P+P+ T+E R  L K A A
Sbjct: 84  SPQMYHVNMVGAPQEIPSVLQAISQSGMNLNPIQEGNVIKVPIPKVTKEHRENLAKKAKA 143

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
              K+K  +R+IR   M      +     SED V  +E  IQ++TD    N +   E K 
Sbjct: 144 GCNKTKEQIRDIRNQAMKE--AKKAKATVSEDTVRLVEKQIQQLTDDFNGNAEKILEAKS 201

Query: 181 KEIMH 185
           KE++ 
Sbjct: 202 KELLK 206


>gi|58378683|ref|XP_308944.2| AGAP006804-PA [Anopheles gambiae str. PEST]
 gi|55246028|gb|EAA04181.2| AGAP006804-PA [Anopheles gambiae str. PEST]
          Length = 273

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 4/182 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +IDL  ++ +M  +++ +K D +   + R +   ++ +++   G    L ++  V    P
Sbjct: 92  LIDLDGLRTQMEKSLAAMKDDYVKNLSLRSTTGSIETLRITYEGKDYQLQELGQVVRKNP 151

Query: 64  RMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           + LVV+ V   + +  V + I  S + LNP  +G  L IPVP+ T E R  L K A    
Sbjct: 152 KTLVVNLVAFPQTIPVVLQAIQRSGMNLNPQQDGTTLFIPVPKVTREHREGLAKNAKVLF 211

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            K +  +++ +      +KK +K    SED     +  I  I D  +K  +   E K+ E
Sbjct: 212 IKCRDRIKDAQ---NQSIKKLKKQSNVSEDEAFQAQAQITAIADGFVKEAEKLMELKQAE 268

Query: 183 IM 184
           ++
Sbjct: 269 LL 270


>gi|169827156|ref|YP_001697314.1| ribosome recycling factor [Lysinibacillus sphaericus C3-41]
 gi|168991644|gb|ACA39184.1| Ribosome recycling factor (Ribosome-releasing factor) (RRF)
           [Lysinibacillus sphaericus C3-41]
          Length = 125

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/119 (36%), Positives = 79/119 (66%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  K++M  TI+   +++ ++R GR + S+LD + V+ YG+  P+NQ+A V+V E R+L
Sbjct: 6   LEQAKEKMNKTIAAFTRELSSIRAGRANASLLDRIMVDYYGAPTPINQLAGVSVPEARLL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           V++ +DK ++  +E+ I +S++G+ P  +G ++R+ +P  TEERR  LVK      +K+
Sbjct: 66  VITPYDKTILGEIEKAIMKSDIGITPTNDGSIIRLMIPALTEERRKDLVKQVQKRQQKT 124


>gi|148676726|gb|EDL08673.1| mCG22269 [Mus musculus]
          Length = 237

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 3/160 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ + + M   +  LK +       R +P  LD + V      V LNQ+  +++ 
Sbjct: 80  EDIISLEEVDEDMKSVVEALKDNFNKTLNIRTAPGSLDHITVVTADGKVALNQIGQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQVILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEND 160
              K+K ++R +R + M+ LKKS+   K SED +  +E  
Sbjct: 200 NTNKAKENLRKVRTNAMNKLKKSK--DKTSEDTIRLIEKQ 237


>gi|332832794|ref|XP_003312315.1| PREDICTED: ribosome-recycling factor, mitochondrial [Pan
           troglodytes]
          Length = 284

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 3/150 (2%)

Query: 36  SMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIV 94
             LD + V      + LNQ++ +++  P++++V++    E  A+  + I ES + LNP V
Sbjct: 136 GSLDKIAVVTADGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEV 195

Query: 95  EGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV 154
           EG ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+     SED +
Sbjct: 196 EGTLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVRTNSMNKLKKSK--YTVSEDTI 253

Query: 155 ASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
             +E  I ++ D T+  +D     K KE++
Sbjct: 254 RLIEKQISQMADDTVAELDRHLAVKTKELL 283


>gi|163731915|ref|ZP_02139362.1| ribosome recycling factor [Roseobacter litoralis Och 149]
 gi|161395369|gb|EDQ19691.1| ribosome recycling factor [Roseobacter litoralis Och 149]
          Length = 121

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/122 (48%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+ ++VWDK +V  VE+ I ES LG+NP + G ++ +P+PE  EERR  L KVA  YAE 
Sbjct: 1   MVTINVWDKGLVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELSKVAGQYAEH 60

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +++S+RNIRRDGMD +KK++  G  SED     E ++Q+ITD  IK ID     K+ EIM
Sbjct: 61  ARVSIRNIRRDGMDQIKKAKADG-MSEDDQKIWEGEVQEITDRYIKGIDEQLASKQSEIM 119

Query: 185 HF 186
             
Sbjct: 120 QV 121


>gi|17861680|gb|AAL39317.1| GH21184p [Drosophila melanogaster]
          Length = 254

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 94/185 (50%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + ++++   +  +M  ++  +K+D +   +   +   +D ++++  G    L ++A ++ 
Sbjct: 71  LREILNFDGLNSQMQKSVMQMKEDFVKHLSLPSTSGAIDTLRIKVDGQEHELQELAQISR 130

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ ++V++    + +  V + I +S + LNP  +G  L IP+P+ T+E R  L K A 
Sbjct: 131 KNPKTIIVNMIGFPQTIPDVLKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAK 190

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K + ++R ++    +H++K +K  +  +D   + +  +  I D  I   D     K
Sbjct: 191 ALFVKYRDAIRGVQ---NEHIRKLKKQPELGKDDAFAAQAQVTAIADRFISEADKLLASK 247

Query: 180 KKEIM 184
           +KE++
Sbjct: 248 QKELL 252


>gi|301633271|gb|ADK86825.1| ribosome recycling factor [Mycoplasma pneumoniae FH]
          Length = 185

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 101/185 (54%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L   K+       +LK+++  +RTGR +P + D + VE+YG  +P+  +A + V
Sbjct: 2   MSPEKYLNFFKETADKKFQWLKEELSKIRTGRPNPKLFDNILVESYGDRMPMVALAQIAV 61

Query: 61  LEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             PR +V+  +D K  + ++   I  +NLG+ P+++G  +RI  P  T+E RL  +K A 
Sbjct: 62  NPPREIVIKPFDVKNNINAIYSEIQRANLGVQPVIDGDKIRINFPPMTQESRLESIKQAK 121

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E+    +R++RRD +  +K   K     ED    L+ +++K+    I  +++  ++K
Sbjct: 122 KVVEQIHQELRSVRRDTLQMIK---KDDHKDEDFEEFLKEEVEKVNKQYIAQLETIQKQK 178

Query: 180 KKEIM 184
           +KE++
Sbjct: 179 EKELL 183


>gi|332229925|ref|XP_003264137.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 3
           [Nomascus leucogenys]
          Length = 284

 Score =  155 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 36  SMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIV 94
             LD + V      + LNQ++ +++  P++++V++    E  A+  + I ES + LNP V
Sbjct: 136 GSLDKIAVVTADGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEV 195

Query: 95  EGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV 154
           EG ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+ +   SED +
Sbjct: 196 EGTLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTI 253

Query: 155 ASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
             +E  I ++ D T+  +D     K KE++
Sbjct: 254 RLIEKQISQMADDTVAELDRHLAVKTKELL 283


>gi|13508375|ref|NP_110325.1| ribosome releasing factor [Mycoplasma pneumoniae M129]
 gi|2500646|sp|P75161|RRF_MYCPN RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|1673870|gb|AAB95854.1| ribosome releasing factor [Mycoplasma pneumoniae M129]
          Length = 184

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 53/185 (28%), Positives = 101/185 (54%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L   K+       +LK+++  +RTGR +P + D + VE+YG  +P+  +A + V
Sbjct: 1   MSPEKYLNFFKETADKKFQWLKEELSKIRTGRPNPKLFDNLLVESYGDRMPMVALAQIAV 60

Query: 61  LEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             PR +V+  +D K  + ++   I  +NLG+ P+++G  +RI  P  T+E RL  +K A 
Sbjct: 61  NPPREIVIKPFDVKNNINAIYSEIQRANLGVQPVIDGDKIRINFPPMTQESRLESIKQAK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E+    +R++RRD +  +K   K     ED    L+ +++K+    I  +++  ++K
Sbjct: 121 KVVEQIHQELRSVRRDTLQMIK---KDDHKDEDFEEFLKEEVEKVNKQYIAQLETIQKQK 177

Query: 180 KKEIM 184
           +KE++
Sbjct: 178 EKELL 182


>gi|157121137|ref|XP_001659843.1| mitochondrial ribosome recycling factor [Aedes aegypti]
 gi|108874707|gb|EAT38932.1| mitochondrial ribosome recycling factor [Aedes aegypti]
          Length = 258

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 96/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + +VID+++++  M  T+  +K+D +   + R +   ++ +KV   G    L ++A V  
Sbjct: 74  LAEVIDIESLRTHMEKTLETMKEDYIKNLSLRSATGAIETLKVSYEGKDYQLQELAQVVR 133

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +VV+ V   + + +V + I +S + LNP  +G  L IPVP+ T E R  L K A 
Sbjct: 134 KNPKTVVVNLVSFPQTIPAVLQAIQKSGMNLNPQQDGTTLFIPVPKVTREHREGLAKNAK 193

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
               K + ++++I+      +K+ +K    SED+   ++  +  I +  IK  +   E K
Sbjct: 194 TLFVKCRDAIKDIQ---NKTIKQVKKQANISEDLSFQVQTQVTAIANGYIKEAEKMLETK 250

Query: 180 KKEIM 184
           + E++
Sbjct: 251 QAELL 255


>gi|149038905|gb|EDL93125.1| rCG45505 [Rattus norvegicus]
          Length = 239

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 3/161 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ + + M   +  LK +       R +P  LD + V      + LNQ+  +++ 
Sbjct: 80  EDIISLEEVDEDMKSVMEALKDNFNKTLNIRTAPGSLDHITVVTADGKLALNQIGQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P+ T E R  LVK+A  
Sbjct: 140 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
              K+K ++R +R + M+ LKKS+   K SED +  +E  I
Sbjct: 200 NTNKAKENLRKVRTNAMNKLKKSK--DKTSEDTIRLIEKQI 238


>gi|67925886|ref|ZP_00519172.1| Ribosome recycling factor [Crocosphaera watsonii WH 8501]
 gi|67852265|gb|EAM47738.1| Ribosome recycling factor [Crocosphaera watsonii WH 8501]
          Length = 122

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/122 (40%), Positives = 78/122 (63%)

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           M+++  +DK  +  +E+ I  S++GL P  +GQV+R+ +P  TEERR  LVK+A   AE+
Sbjct: 1   MIMIQPYDKGSMGQIEKAIQMSDVGLTPNNDGQVIRLNIPSLTEERRKDLVKLASKMAEE 60

Query: 125 SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            K+++RNIRRD +D ++K  K+   S+D    L++DIQK+TD     ID   + K+ +IM
Sbjct: 61  GKVAIRNIRRDAIDDVRKQEKNSDISKDESRDLQDDIQKVTDKFTNKIDDLLKSKETDIM 120

Query: 185 HF 186
             
Sbjct: 121 TV 122


>gi|304373376|ref|YP_003856585.1| Ribosome recycling factor [Mycoplasma hyorhinis HUB-1]
 gi|304309567|gb|ADM22047.1| Ribosome recycling factor [Mycoplasma hyorhinis HUB-1]
          Length = 186

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 95/190 (50%), Gaps = 8/190 (4%)

Query: 1   MNQVIDLQN----IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVA 56
           M   ++L++    I  +       L++++  +  GR +P ++  +KVE Y S  P+ ++A
Sbjct: 1   METKLELKDFIEIINSKSNHIFQKLERNLSKINIGRANPQLVSFLKVEYYDSLTPIGEIA 60

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVK 116
            ++V  P+ L++  +D+ +   +   I    L +    EG  +R+ +PE T ++R  LVK
Sbjct: 61  AISVPSPQQLLIKPYDQNVTKKIASTIVAHKLDVQIQNEGHQVRLILPELTTQKRQELVK 120

Query: 117 VAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
               + E++K+ +R +R++      K  K  + SED    +  ++QK  D  I+ +D   
Sbjct: 121 SIKKFDEEAKVEIRQVRQEVN----KLVKKEEYSEDEERRILTELQKQIDKKIQEVDKVL 176

Query: 177 EEKKKEIMHF 186
            EK   +M F
Sbjct: 177 SEKSANLMSF 186


>gi|328479954|gb|EGF49002.1| ribosome recycling factor [Lactobacillus rhamnosus MTCC 5462]
          Length = 129

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/116 (39%), Positives = 75/116 (64%), Gaps = 2/116 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           NQ+I  +  K  MG T   L++++  +R GR + S+L+ + V+ YG+  PLNQ+A +TV 
Sbjct: 3   NQII--EQAKVNMGKTEESLQRELGNIRAGRANASLLNQITVDYYGAPTPLNQMAAITVP 60

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKV 117
           E R+L +S +DK  + ++E  I+ S+LG+NP  +G V+R+ +P+ T ERR  L K 
Sbjct: 61  EARVLQISPYDKSSLKNIETAINASDLGINPANDGDVIRLVIPQLTGERRKELPKK 116


>gi|269115236|ref|YP_003302999.1| ribosome recycling factor [Mycoplasma hominis]
 gi|268322861|emb|CAX37596.1| Ribosome recycling factor (Ribosome releasingfactor)(RRF)
           [Mycoplasma hominis ATCC 23114]
          Length = 183

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 99/180 (55%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  + + +  +I   +  +M +  GR +P ++  +K+E YGS + + ++A++T   P  L
Sbjct: 7   LLELDEEISKSIVNYENQLMKVVIGRANPVLISKIKLEYYGSPISVEEIASITTSGPLQL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +D  ++ ++E+ I ++ + ++ I EG  LR+  P+ T E+R+ + K   +  E+++
Sbjct: 67  IVKPYDMSVLKNIEKAIMDNKINVSIINEGHQLRLQYPQMTTEKRVEMTKQLASITEQAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I VR  R+D    +K        SED+     ++IQK  D +I+ I+   + K+KE++  
Sbjct: 127 IGVRQARQDINKKIKA---DSDLSEDIQKHYLDNIQKEVDKSIEKINEMSKTKEKELLTI 183


>gi|332375891|gb|AEE63086.1| unknown [Dendroctonus ponderosae]
          Length = 268

 Score =  150 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 96/185 (51%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + +VI++ +++  M   +  ++ D +   + R +   ++ V V   G+   + ++A +  
Sbjct: 84  LAEVINVGSLRSLMEKALLQMEDDFVKHLSLRSTTGAIESVPVNLDGNEHTMQELAQIVR 143

Query: 61  LEPRMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +V++     + + +  + + +S + LNP  +G  L IPVP+ T+E R  L K A 
Sbjct: 144 KNPKTIVMNFATFPQAIPAALKALSKSGMNLNPQQDGTTLFIPVPKVTKEHREQLAKNAK 203

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
               K K SVR+++   +  +K+ +K  + SED+  S+E  I  I D  I N ++   +K
Sbjct: 204 QLFVKCKDSVRDVQ---LKFIKQLKKQDRISEDLARSVEQQIIAIADQFIANAEATLNKK 260

Query: 180 KKEIM 184
           + E++
Sbjct: 261 QAELL 265


>gi|330723724|gb|AEC46094.1| Ribosome recycling factor [Mycoplasma hyorhinis MCLD]
          Length = 186

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 95/190 (50%), Gaps = 8/190 (4%)

Query: 1   MNQVIDLQN----IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVA 56
           M   ++L++    I  +       L++++  +  GR +P ++  +KVE Y S  P+ ++A
Sbjct: 1   METKLELKDFIEIINSKSNHIFQKLERNLSKINIGRANPQLVSYLKVEYYDSLTPIGEIA 60

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVK 116
            ++V  P+ L++  +D+ +   +   I    L +    EG  +R+ +PE T ++R  LVK
Sbjct: 61  AISVPSPQQLLIKPYDQNVTKKIASTIVAHKLDVQIQNEGHQVRLILPELTTQKRQELVK 120

Query: 117 VAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
               + E++K+ +R +R++      K  K  + SED    +  ++QK  D  I+ +D   
Sbjct: 121 SIKKFDEEAKVEIRQVRQEVN----KLVKKEEYSEDEERRILIELQKQIDKKIQEVDKVL 176

Query: 177 EEKKKEIMHF 186
            EK   +M F
Sbjct: 177 SEKSANLMSF 186


>gi|159490140|ref|XP_001703044.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158270857|gb|EDO96689.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 277

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 15/189 (7%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEA------YGSHVPLNQVA 56
           Q  D++    +MG+ +  L++ +  +RTGR SP +L+ V VEA      +G HVPL  + 
Sbjct: 96  QEWDIEPFVTQMGEALDHLRRKLAGIRTGRASPGLLEAVSVEARSSGSSHGPHVPLRVLG 155

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVK 116
            V    P++L   V DK    +V + I  S L L    E   + +PVP  + E     VK
Sbjct: 156 TVVARGPQLL---VDDK----AVAKAIQNSPLKLQARAENGEVLVPVPRLSLEMVKGFVK 208

Query: 117 VAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
           +A   AE ++ +VR +R   ++  K     G A E  +  +E  +Q +TD  I+ +D   
Sbjct: 209 LAAQEAEAARKAVRAVRHRALEQAKLCNTGGPAGE--LKRMEQQVQALTDKHIREVDGLL 266

Query: 177 EEKKKEIMH 185
             K++++  
Sbjct: 267 RAKERDLQE 275


>gi|170036921|ref|XP_001846309.1| ribosome recycling factor, mitochondrial [Culex quinquefasciatus]
 gi|167879937|gb|EDS43320.1| ribosome recycling factor, mitochondrial [Culex quinquefasciatus]
          Length = 259

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 90/185 (48%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + +V D+  ++  M   ++ +K D +   + R +   ++ +KV   G    L ++  +  
Sbjct: 74  LAEVFDVAALRTLMERNVATMKDDYIKNLSLRSATGAMETLKVTYEGKDYQLQELGQIVR 133

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +VV+ V   + + +V + I +S + LNP  +G  L +PVP+ T E R  L K A 
Sbjct: 134 KNPKTVVVNLVSFPQTIPAVLQAIQKSGMNLNPQQDGTTLFVPVPKVTREHREGLAKNAK 193

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
               K + ++++ +      +KK +K    SED+   ++  I  I +  IK  +   E K
Sbjct: 194 TLFIKCRDAIKDAQ---NGQIKKLKKQTDISEDLNHQVQAQITAIANEYIKEAEKMMEIK 250

Query: 180 KKEIM 184
           + E++
Sbjct: 251 QAELL 255


>gi|193216475|ref|YP_001999717.1| ribosome recycling factor [Mycoplasma arthritidis 158L3-1]
 gi|193001798|gb|ACF07013.1| ribosome recycling factor [Mycoplasma arthritidis 158L3-1]
          Length = 183

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 98/180 (54%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  +++ +   I   +  +  +  GR +P++++ +K+  Y S + L+++A+++V  P  L
Sbjct: 7   LMELQELVNKAILGYEAQLTKVVIGRANPNLINKIKINYYDSILSLDEIASISVASPLQL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V  +D  +  ++E+ I +  L +    EG  +RI  P+ T E+R  +VK  +   E+++
Sbjct: 67  LVKPYDMSVTKTIEKAIMDYKLNVTIANEGHQIRITYPQMTTEKRGEMVKQLNLITEQAR 126

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           ++VR  R++    +K    + + SED+     + IQ+  D +IK I    +EK+K+++  
Sbjct: 127 VTVRQARQEINKKIKA---NKELSEDLQKHYLDAIQEEIDKSIKKIQEIADEKEKDLLTI 183


>gi|194246630|ref|YP_002004269.1| ribosome recycling factor [Candidatus Phytoplasma mali]
 gi|193806987|emb|CAP18422.1| Ribosome recycling factor [Candidatus Phytoplasma mali]
          Length = 185

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 109/187 (58%), Gaps = 7/187 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           MN++  L N++++M  +   + K++ ++RT   +P++LD + +  YG ++ L Q+++++V
Sbjct: 5   MNEI--LTNVENKMQKSSIEMLKELSSIRTDISNPNVLDKININYYGENISLKQLSSISV 62

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNP-IVEGQVLRIPVPETTEERRLALVKVAH 119
           +E   L +  +D ++   +++ I  S+LG+NP +V   ++++  P  TEERR +L+K   
Sbjct: 63  VEGNQLNIKPYDIKITDQIKKAILASDLGINPEVVNNSLIKLIFPPLTEERRKSLIKQVE 122

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             +E  K+ +RNIRR+G + +K        ++D+        Q +TD  I+ I+    +K
Sbjct: 123 KISENVKVVIRNIRREGNNKIKTMI----LTKDLELLFLKKNQILTDKYIELIEKQTNDK 178

Query: 180 KKEIMHF 186
           KKE++  
Sbjct: 179 KKELLKI 185


>gi|261749578|ref|YP_003257264.1| ribosome recycling factor [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497671|gb|ACX84121.1| ribosome recycling factor [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 184

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 103/187 (55%), Gaps = 7/187 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSP-SMLDLVKVEAYGSHVPLNQVANVT 59
           +N++    + K  M   +  L++++  +R G  S   +L+ +K++ Y S  PL +VA +T
Sbjct: 4   LNEIF--FSCKKDMEKILKKLQEEIHRIRLGSKSVVPLLEKIKIKCYASFFPLIEVATIT 61

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           +++   + +  WD+ +++ +++ I + NLG  P  +G+ + I +P  TEE R  L+K   
Sbjct: 62  IVDNMNITIHPWDRAIISYIDKAIIDENLGFMPTNKGESIHIRLPILTEEGRKNLMKKIK 121

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              EK+KI VR  R+     +K+ +     SED+    EN IQKIT  +I+ ID  F  K
Sbjct: 122 TQTEKAKIFVRTTRKKYNQSIKRLK----ISEDLSKIGENRIQKITKVSIQKIDVLFFSK 177

Query: 180 KKEIMHF 186
           +KEI+  
Sbjct: 178 EKEILSI 184


>gi|219125246|ref|XP_002182896.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405690|gb|EEC45632.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 314

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 4/182 (2%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D   +K RM   +      + T+R    +  + D ++V+AYGSH PLN VA V +    +
Sbjct: 132 DPAQVKIRMTKVVDSFVTKLKTIRGSEPTADIFDDIQVDAYGSHAPLNSVAQVVISSSTL 191

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIV-EGQVLRIPVPETTEERRLALVKVAHAYAEK 124
              + +D E+  +V   I +  L LNP V EG V+RIP+P  + E R    K    + EK
Sbjct: 192 AQATCYDPELAKNVGVAIRD-KLELNPSVEEGGVVRIPLPRVSLEVRQQTAKALTKHTEK 250

Query: 125 SKISVRNIRRDGMDHLKKSR--KSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            +  VR IRR+ +  +K+    K    S+D     + +I+ +T+  +  ++   E+K K 
Sbjct: 251 YRQRVRTIRRNVLKVVKQGEAGKLEGISKDDAFRAQKEIEDVTEKIMVKLNEAAEQKHKA 310

Query: 183 IM 184
           IM
Sbjct: 311 IM 312


>gi|71894688|ref|YP_278796.1| ribosome releasing factor [Mycoplasma synoviae 53]
 gi|71851476|gb|AAZ44085.1| ribosome releasing factor [Mycoplasma synoviae 53]
          Length = 184

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 47/178 (26%), Positives = 90/178 (50%), Gaps = 4/178 (2%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L +   +   +I     +M  + TG+ +P ++  +KV  Y +   L+++A + V EP+ L
Sbjct: 7   LDDFNKKTQKSIDHFVFEMSKISTGKANPQIVKKIKVMYYDNPTELDEIATIMVPEPQQL 66

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVE-GQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           ++  +D      + + I  +NLG  P+ + G  +RI  P  T +RR  LVK    + E++
Sbjct: 67  LIKPFDATSTKDIVKAILSANLGNFPMTDEGNQIRITFPPMTSDRRKELVKSLSKFIEQA 126

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K+ VRN R++ +  +K      + SEDM  +    I+      I+ I +  +EK+ ++
Sbjct: 127 KVGVRNARQEIIKAIK---SDAELSEDMQKNYVEKIELEVKKKIERISTLAKEKENDL 181


>gi|291000412|ref|XP_002682773.1| predicted protein [Naegleria gruberi]
 gi|284096401|gb|EFC50029.1| predicted protein [Naegleria gruberi]
          Length = 174

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 58/176 (32%), Positives = 99/176 (56%), Gaps = 5/176 (2%)

Query: 13  RMGDTISFLKKDMMTLRTGR-VSPSMLDLVKVEA-YGSHVPLNQVANVTVLEPRMLVVSV 70
           +M   +   +K +  LR+G   +PS+++ V +     S  PL  +A++ V  P+ L ++V
Sbjct: 1   KMDKFVQSSQKQLSELRSGSGANPSLVENVMITMNDDSKRPLKSLASIVVKNPKCLTLNV 60

Query: 71  WDKEMVASVERGIHESNLGLNPIV-EGQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           +DK    ++ + I   +LGLNP       + IP+P+ T+E R  +VK A   AE +K  +
Sbjct: 61  FDKTTTGAISKSIASEDLGLNPQQINENSIDIPIPKMTKEMRENVVKNAKKIAEGAKDKI 120

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R++RR+GM  +K  +    AS+D +   E  +QK+TD  I  ID+  ++K+KEIM 
Sbjct: 121 RDLRRNGMTKIKAQK--EGASKDDIFHDEQVLQKLTDDMITKIDNLVDQKEKEIMK 174


>gi|289811668|ref|ZP_06542297.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 96

 Score =  147 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 41/96 (42%), Positives = 61/96 (63%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
            + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L ++
Sbjct: 1   AEVRMEKCVEAFKTQISKVRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKIN 60

Query: 70  VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPE 105
           V+D+ M  +VE+ I  S+LGLNP   G  +R+P+P 
Sbjct: 61  VFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPP 96


>gi|311246344|ref|XP_003122165.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 2
           [Sus scrofa]
          Length = 210

 Score =  147 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 51/150 (34%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 36  SMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIV 94
             LD + V      + LNQ+  +++  P++++V++    E  A+  + I ES + LNP V
Sbjct: 62  GSLDQITVVTADGKLALNQIGQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPDV 121

Query: 95  EGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV 154
           EG ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+   KASED +
Sbjct: 122 EGTLIRVPIPKVTREHREMLVKLAKQNTNKAKESLRKVRTNAMNKLKKSK--DKASEDTL 179

Query: 155 ASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
             +E  I ++ D T+  ++     K KE++
Sbjct: 180 RLIEKQISQMADDTVAELERHLAVKTKELL 209


>gi|321466374|gb|EFX77370.1| hypothetical protein DAPPUDRAFT_305846 [Daphnia pulex]
          Length = 288

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 94/185 (50%), Gaps = 3/185 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + +++ + ++K  +   +  LK D +   + R +   ++ +K++  G    L ++A +  
Sbjct: 103 IAELVKVSSLKQDLQKGLDQLKSDYVKHLSLRSASGSIENLKIDYEGETYTLQEIAQIGK 162

Query: 61  LEPRMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
              ++LVV++     ++  V + I++S +GLNP  +G  + IP+P+ T E R  L K A 
Sbjct: 163 KGSQLLVVNLSGFPTLMRDVLKAINDSGMGLNPQQDGTKIFIPIPKVTREYRENLAKNAK 222

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              +K K   R+I+   +  +KK  K  + S D+  S++  IQ +T+  +   +     K
Sbjct: 223 TMFQKFKDHSRDIQNRYIRDVKK--KEKEVSSDLSHSVQQQIQTMTEQYVVEGEKVMIAK 280

Query: 180 KKEIM 184
           + E++
Sbjct: 281 QNELL 285


>gi|12045295|ref|NP_073106.1| ribosome recycling factor [Mycoplasma genitalium G37]
 gi|1350904|sp|P47673|RRF_MYCGE RecName: Full=Ribosome-recycling factor; Short=RRF; AltName:
           Full=Ribosome-releasing factor
 gi|3845028|gb|AAC72456.1| ribosome recycling factor [Mycoplasma genitalium G37]
 gi|166079045|gb|ABY79663.1| ribosome recycling factor [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 183

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 102/187 (54%), Gaps = 5/187 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +   +   K      I +LK+++  +RTGR +P + D + +E+YG  +PL  +A VT+
Sbjct: 1   MTKAHYIDFFKQAADKKIQWLKEELTKIRTGRPNPKIFDNLLIESYGQKMPLISLAQVTI 60

Query: 61  LEPRMLVVSVWDK-EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             PR +++  +D      ++   I  +N+G+ P+++G+ +R+  P+ T+E RL  +K   
Sbjct: 61  NPPREIIIKPFDPKSNTNAIYSEIQRANIGVQPVIDGEKIRVNFPQITQETRLENIKHVK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E+    +R +RRD +  +KK       +ED+  SL+ +I+KI  +    ++   ++K
Sbjct: 121 KIIEQIYQELRVVRRDALQMIKK----DNHNEDLENSLKAEIEKINKNYSNQLEEIQKDK 176

Query: 180 KKEIMHF 186
           +KE++  
Sbjct: 177 EKELLTI 183


>gi|219129866|ref|XP_002185100.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403595|gb|EEC43547.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 314

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 4/182 (2%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D   +K RM   +      + T+R    +  + D ++V+AYGSH PLN VA V +    +
Sbjct: 132 DPAQVKIRMTKVVDSFVTKLKTIRGSEPTADIFDDIQVDAYGSHAPLNSVAQVVISSSTL 191

Query: 66  LVVSVWDKEMVASVERGIHESNLGLNPIV-EGQVLRIPVPETTEERRLALVKVAHAYAEK 124
              + +D E+  +V   I +  L LNP V EG V+RIP+P  + E R    K    + EK
Sbjct: 192 AQATCYDPELAKNVGVAIRD-KLELNPSVEEGGVVRIPLPRVSLEVRQQTAKALTKHTEK 250

Query: 125 SKISVRNIRRDGMDHLKKSR--KSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            +  VR IRR+ +  +K+    K    S+D    ++ +++ +T+  I  ++   ++K K 
Sbjct: 251 YRQRVRTIRRNVLKVVKQGEAGKLEGISKDDAFRVQKEVEDVTEKIIVKLNEAADQKHKA 310

Query: 183 IM 184
           IM
Sbjct: 311 IM 312


>gi|315302965|ref|ZP_07873688.1| ribosome recycling factor [Listeria ivanovii FSL F6-596]
 gi|313628664|gb|EFR97074.1| ribosome recycling factor [Listeria ivanovii FSL F6-596]
          Length = 119

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/114 (44%), Positives = 77/114 (67%)

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
             ++  +E+ I +S+LGL P  +G VLR+ +P+ TEERR  LVK     AE++K++VRNI
Sbjct: 6   PPILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNI 65

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           RR+  + LKK  K+G  +ED + S   D+QK+TD +IKNIDS  ++K+ EI+  
Sbjct: 66  RREANEDLKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV 119


>gi|119632274|gb|EAX11869.1| hCG1980694, isoform CRA_b [Homo sapiens]
          Length = 245

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 3/167 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I   K +         SP  LD + V      + LNQ+  ++V 
Sbjct: 80  EDIINLEEVNEEMKSVIEARKDNFNKTLNIGTSPGSLDKIAVVTADGKLALNQIRQISVK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
            P++++V++    E   +  + I ES + LNP VEG ++R+P+P+   E R  LVK+A  
Sbjct: 140 LPQLILVNMASFPEFTVAAIKAIRESGMNLNPEVEGTLIRVPIPQVIREHREMLVKLAKQ 199

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDS 167
              K+K S+R +  + M+ LKKS+ +   SE  +   E  I ++ D 
Sbjct: 200 NTNKAKYSLRKVCTNAMNKLKKSKDT--VSEGTIRLTEKQISQMADD 244


>gi|295698561|ref|YP_003603216.1| ribosome recycling factor [Candidatus Riesia pediculicola USDA]
 gi|291157311|gb|ADD79756.1| ribosome recycling factor [Candidatus Riesia pediculicola USDA]
          Length = 185

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 57/178 (32%), Positives = 98/178 (55%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
            +K  M   +   +K +  +R+ ++ P++L+ V V  YGS  PLN+++ ++    R L +
Sbjct: 8   EVKKNMNQIVRSFEKRINKIRSEKIDPNILEKVSVFCYGSQTPLNRISLISSKNSRTLSI 67

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +V+D+ ++  V+  I +  L     +   V+++  P  TEERR  L+K+    AE  KIS
Sbjct: 68  TVFDRSLIKIVKEEILKLRLDCQIFLSENVIKLVFPLITEERRKNLIKIVQKMAETEKIS 127

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +R IR+   D +K   KS K  ED    +  +IQ  TD+ IK ID   +EK++ ++HF
Sbjct: 128 IRKIRKVTKDKIKTLIKSKKIDEDNGRVIYMEIQDYTDTFIKKIDVILKEKERSLLHF 185


>gi|332229927|ref|XP_003264138.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 4
           [Nomascus leucogenys]
          Length = 210

 Score =  145 bits (366), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 36  SMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIV 94
             LD + V      + LNQ++ +++  P++++V++    E  A+  + I ES + LNP V
Sbjct: 62  GSLDKIAVVTADGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEV 121

Query: 95  EGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV 154
           EG ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+ +   SED +
Sbjct: 122 EGTLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTI 179

Query: 155 ASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
             +E  I ++ D T+  +D     K KE++
Sbjct: 180 RLIEKQISQMADDTVAELDRHLAVKTKELL 209


>gi|291042689|ref|NP_001166983.1| ribosome-recycling factor, mitochondrial isoform 3 precursor [Homo
           sapiens]
 gi|221043312|dbj|BAH13333.1| unnamed protein product [Homo sapiens]
          Length = 210

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 36  SMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIV 94
             LD + V      + LNQ++ +++  P++++V++    E  A+  + I ES + LNP V
Sbjct: 62  GSLDKIAVVTADGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPEV 121

Query: 95  EGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV 154
           EG ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+ +   SED +
Sbjct: 122 EGTLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVRTNSMNKLKKSKDT--VSEDTI 179

Query: 155 ASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
             +E  I ++ D T+  +D     K KE++
Sbjct: 180 RLIEKQISQMADDTVAELDRHLAVKTKELL 209


>gi|312371081|gb|EFR19345.1| hypothetical protein AND_22651 [Anopheles darlingi]
          Length = 273

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 92/185 (49%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +  +IDL  ++ +M  +++ +++D +   + R +   ++ +++   G    L ++A V  
Sbjct: 90  LGSLIDLPGLRTQMEKSLAAMREDYIKNLSLRSTTGSIETLRISFEGKDYQLQELAQVVR 149

Query: 61  LEPRMLVVS-VWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +VV+ V   + + +V + I  S + LNP  +G  L IPVP+ T E R  L K A 
Sbjct: 150 KNPKTIVVNLVSFPQTIPAVLQAIQRSGMNLNPQQDGTTLFIPVPKVTREHREGLAKNAK 209

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
               K +  +++ +      +KK +K   ASED     +  I +I D  IK  +   E K
Sbjct: 210 VLFIKCRDRIKDAQ---NQSIKKLKKQSNASEDEAYQAQQQITQIADGFIKEAEKIMESK 266

Query: 180 KKEIM 184
           + E++
Sbjct: 267 QAELL 271


>gi|223994925|ref|XP_002287146.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976262|gb|EED94589.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 179

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 6/178 (3%)

Query: 14  MGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK 73
           M   I+ L++   ++R G  +  + D V+V AYG  VPL+ V  V + +P+   +S +D 
Sbjct: 1   MLTIIASLERSFSSIRGGEATAELFDAVRVSAYGETVPLSSVGQVVIEDPQRATISCYDP 60

Query: 74  EMVASVERGIHES-NLGLNPIVE---GQVLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
            +   V   + +   + LNP VE     V+ +P+P  +EE R  +VK     AE  +  V
Sbjct: 61  SVSNDVRDAVRDMPGMNLNPYVEEGGSGVVIVPIPRVSEETRKEIVKELGRQAENGRQRV 120

Query: 130 RNIRRDGMDHLKKSR--KSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R IRR+ MD +KK +  K    S+D    +  D++ +T+  +  ++   E+K+K +M 
Sbjct: 121 RKIRREAMDVVKKGKDGKLEGISKDDAFRVGKDVEGVTEEVLAVLNDIVEKKQKSVME 178


>gi|217072808|gb|ACJ84764.1| unknown [Medicago truncatula]
          Length = 206

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 67/120 (55%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
            +   +M   ++ L  ++  LRTGR S  MLD + VE  G  +PL+++A V+VL+P+ L 
Sbjct: 87  ASASSQMEAAMTALSVELSKLRTGRASAGMLDHIIVETGGVKMPLSRIALVSVLDPKTLS 146

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           V+ +D E +  +E  I  S LGLNP  +G+ L   +P  T+E   A+ K+     E ++ 
Sbjct: 147 VNPYDPETLKQLENAIVSSPLGLNPRTDGERLIAVIPPLTKEHMQAMNKLVTKSCEDTRQ 206


>gi|302848442|ref|XP_002955753.1| hypothetical protein VOLCADRAFT_106930 [Volvox carteri f.
           nagariensis]
 gi|300258946|gb|EFJ43178.1| hypothetical protein VOLCADRAFT_106930 [Volvox carteri f.
           nagariensis]
          Length = 266

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 2/181 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKV--EAYGSHVPLNQVANVTVLE 62
            DL     +M   +   +K++  +RTGR SP +L+ V V   ++G HVP+  +  V V  
Sbjct: 82  FDLAPFVSQMRSALEHYQKELAGIRTGRASPGLLEGVMVGESSHGKHVPVRALGTVVVRN 141

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           P +LVV V++ +    +   I  S L L   VEG  + + VP  T +    +V++A   A
Sbjct: 142 PHLLVVEVYNPQDAQPLAEAIQSSPLKLQARVEGLEVLVEVPRLTMDMVERMVRLAGQEA 201

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E ++  VR  R   +D  K+    G  S++     E  +Q  TD  I  +D+    K+ E
Sbjct: 202 EAARAEVRRARHKALDLAKRVAAGGGVSKEETKRREVQVQVATDKHIAEVDALLRAKETE 261

Query: 183 I 183
           +
Sbjct: 262 L 262


>gi|322796292|gb|EFZ18864.1| hypothetical protein SINV_09513 [Solenopsis invicta]
          Length = 308

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 96/185 (51%), Gaps = 5/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + QVID+  +  ++   I  LK +     + R S   ++++ V+  G    L ++A ++ 
Sbjct: 124 LEQVIDVNKLTSQLDKAIEDLKNNFTQHLSIRSSMGAIEMLSVKFEGKDYTLQELAQISR 183

Query: 61  LEPRMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+++V++V    + +  + + + ++ + LNP  +G  + IPVP+ T+E R  L K A 
Sbjct: 184 K-PKLVVLNVSTFPQAIPDILKSLMKNQMKLNPQQDGTTIYIPVPKVTKEHRETLSKNAK 242

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           ++  K   +VR IR   +  +K+  K    ++D+V  +E+ I  ++   +   +   E K
Sbjct: 243 SFYVKCCDNVRQIRNKQIKAIKQKEK---LAKDLVFRIESYIDILSHQYVSKAEEILETK 299

Query: 180 KKEIM 184
           +KE++
Sbjct: 300 QKELL 304


>gi|323507599|emb|CBQ67470.1| conserved hypothetical protein [Sporisorium reilianum]
          Length = 331

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 10/192 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTL--RTGRVSPSMLDLVKVE----AYGSHVPLNQV 55
           ++  DL  I   M   +   +     L    GR  PS+LD +KVE       +  PL + 
Sbjct: 139 DEAFDLDAIASHMSRAVERCRSTTSALVGSFGRADPSLLDNIKVEFASGTSKTLHPLREF 198

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIV---EGQVLRIPVPETTEERRL 112
           A V V +  ++ V+ +D +M+  +ER I+ S L L P     +  VLR+ VP+ T E R 
Sbjct: 199 ATVGVRDSALI-VTAFDADMLKHIERAIYTSQLNLTPQAQPGDDSVLRVAVPQPTTESRQ 257

Query: 113 ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
           A+VK      E +++S+R+ R      +K         +         ++  T      +
Sbjct: 258 AMVKDLTRICENARVSIRDARHKAQKQIKSDVDRKVVGKSEGDKESKKVEAETKKWTAQV 317

Query: 173 DSFFEEKKKEIM 184
           D  FE+ K+ ++
Sbjct: 318 DQLFEKMKQSLL 329


>gi|292558632|gb|ADE31633.1| Ribosome recycling factor [Streptococcus suis GZ1]
          Length = 120

 Score =  140 bits (354), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 50/120 (41%), Positives = 78/120 (65%)

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ +DK ++  +ER ++ S+LGL P  +G V+R+ +P  TEE R  L K      E SK
Sbjct: 1   MITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKKVGENSK 60

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +++RNIRRD MD  KK+ K+ + +ED + +LE DIQK+TD  IK ID    +K+KE++  
Sbjct: 61  VAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKDIQKVTDDAIKTIDKMTADKEKELLEV 120


>gi|156542086|ref|XP_001602891.1| PREDICTED: similar to GA18189-PA [Nasonia vitripennis]
          Length = 240

 Score =  140 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 95/185 (51%), Gaps = 5/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + +++D+ ++  +M   I  +K D +   T R +   L+ + V+       + ++A +  
Sbjct: 56  LGELLDVDDLTSQMSQAIENMKADFIKNLTLRSTTGSLEQIPVKVDDKEYQIQELAQI-A 114

Query: 61  LEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
            +P++++++V      +  + + I +S L +NP  EG  L +P+P+ T+E R  L K A 
Sbjct: 115 RKPKLIILNVSSFPTAIPHILKAIQKSGLNINPQQEGTTLYLPIPKVTKEHRENLSKNAK 174

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   + +  +++IR      +K  +K    SED +  +++ ++ ++D  +K  +   E K
Sbjct: 175 AIYIRYRDEIKDIRSKA---IKNLKKRKDVSEDSIRRVQSQVEALSDKYVKEAEIVLETK 231

Query: 180 KKEIM 184
           + E++
Sbjct: 232 QNELL 236


>gi|307191744|gb|EFN75186.1| Ribosome-recycling factor, mitochondrial [Harpegnathos saltator]
          Length = 248

 Score =  140 bits (354), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 90/185 (48%), Gaps = 5/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT- 59
           M +VID+  +  ++   I  LK + +   + R S   L+ + V        L ++A ++ 
Sbjct: 64  MEEVIDVNKLTSQLDKAIEGLKNNFVKYLSIRSSVGALEELVVRFEDKDYTLQELAQISR 123

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             +  +L +S +  + + ++   + ++ + LNP  +G  + +P+P+ T+E R  L K A 
Sbjct: 124 KPKLIVLNISTF-PQAIPNILNSLSKNQMNLNPQQDGTTVYVPIPKVTKEHRETLSKNAK 182

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
            +  K   +VR+IR      +K  ++    ++D+V  +E  I  ++   I   +   E K
Sbjct: 183 GFYVKCCDNVRDIR---NKQIKSLKREESLAKDLVFKIEGYIDALSQQYISKAEQLLETK 239

Query: 180 KKEIM 184
           +KE++
Sbjct: 240 QKELL 244


>gi|321309651|ref|YP_004191980.1| ribosome recycling factor [Mycoplasma haemofelis str. Langford 1]
 gi|319801495|emb|CBY92141.1| ribosome recycling factor [Mycoplasma haemofelis str. Langford 1]
          Length = 177

 Score =  137 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 4/176 (2%)

Query: 11  KDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           +    D +  L +++  L T R+ P ++  + V AY + + LN++AN+ V   R L +  
Sbjct: 6   ESEFKDILDRLNQNLKKLYTSRIHPDLVSGIPVSAYDTEMKLNELANINVPSARTLEIKP 65

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVR 130
           +D  ++A +E+ I ++    +PIV+   +RI +   TEE R   VK A    EK+K+S+R
Sbjct: 66  YDISLLAEIEKAIKKNKPEFSPIVQSDHIRISLLPPTEETRKRSVKEAKELLEKAKVSLR 125

Query: 131 NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
             R+D    +KK        ED+     N++          +D+ F  K+KE+M  
Sbjct: 126 VARKDFQTKIKK----DGHPEDLEKKYMNELDSKVKDMNAQLDNLFALKEKELMTI 177


>gi|209736400|gb|ACI69069.1| Ribosome recycling factor, mitochondrial precursor [Salmo salar]
          Length = 231

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 35/183 (19%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I L+ +K+ M   ++ LK D     + R SP  LD + V                  
Sbjct: 83  EDIISLEEVKEDMAAVLTTLKDDFSRNLSIRTSPGALDHIVV------------------ 124

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAY 121
                           +  R + ES++ LNP V+G ++R+ +P+ T E R  L K+A  +
Sbjct: 125 ---------------GAATRSLRESSMKLNPEVDGTIIRVAIPKVTREHRENLAKLAKQF 169

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           + K+K S+R +R + +  +KK++ +   SED +  +E  I ++ DS   ++D     K K
Sbjct: 170 SNKAKESLRKVRSNAITQVKKAKDT--VSEDTIRLVEKQIGQMADSFAADVDKQLTTKTK 227

Query: 182 EIM 184
           E++
Sbjct: 228 ELL 230


>gi|27365210|ref|NP_760738.1| ribosome recycling factor [Vibrio vulnificus CMCP6]
 gi|27361357|gb|AAO10265.1| Ribosome recycling factor [Vibrio vulnificus CMCP6]
          Length = 104

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/98 (41%), Positives = 64/98 (65%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           ++ ++RM  ++  LK  +  +RTGR  PS+L  + V+ YG+  PL QVANV   + R L 
Sbjct: 7   KDAQERMEKSVEALKNSLSKVRTGRAHPSLLSGISVDYYGAATPLTQVANVIAEDARTLA 66

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPE 105
           ++V+DKE+   VE+ I  S+LGLNP+  G V+R+P+P 
Sbjct: 67  ITVFDKELTQKVEKAIMMSDLGLNPMSAGTVIRVPLPR 104


>gi|312876745|ref|ZP_07736724.1| ribosome recycling factor [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796476|gb|EFR12826.1| ribosome recycling factor [Caldicellulosiruptor lactoaceticus 6A]
          Length = 108

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/108 (40%), Positives = 70/108 (64%)

Query: 79  VERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMD 138
           +++   +S+LG+NP  +G+V+R+  PE TEERR  LVK     AE +K+++RNIRR+ +D
Sbjct: 1   MKKPFKKSDLGVNPTNDGKVIRLIFPELTEERRKELVKQVKKMAEDAKVAIRNIRREALD 60

Query: 139 HLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
             KK +K+ + +ED +   E D+QK+ D  I+ I+     K+KEIM  
Sbjct: 61  EYKKMKKNNEITEDDLKDAEEDVQKLHDKYIEQIEKLLSAKEKEIMEV 108


>gi|328723889|ref|XP_001942966.2| PREDICTED: ribosome-recycling factor, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 274

 Score =  135 bits (340), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 86/184 (46%), Gaps = 4/184 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           + +      +K  M   ++ LK + +   + R S   LD + V   G    +  +A +  
Sbjct: 90  LAEHFKYYTMKTEMEKAVAALKNNYIKNLSLRSSTGALDSLPVTFEGDEYVIQDLAQIVR 149

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+ +++++    + + +V   +  S + LNP  +   + IP+P+ T+E R  L K A 
Sbjct: 150 KNPKTIILNMTSFPQAIPAVLESLKASGMNLNPQQDKTSIFIPIPKVTKEHRENLSKGAK 209

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           A   K+K S++ ++     ++K  + +   + D+V +L++ I  + D  +       EEK
Sbjct: 210 ALFIKTKDSIKELQ---NKNIKVLKDNDALATDLVHTLQDQITALADKYVLEAQRIMEEK 266

Query: 180 KKEI 183
           + E+
Sbjct: 267 QSEL 270


>gi|309800201|ref|ZP_07694384.1| ribosome recycling factor [Streptococcus infantis SK1302]
 gi|308116172|gb|EFO53665.1| ribosome recycling factor [Streptococcus infantis SK1302]
          Length = 111

 Score =  134 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 46/111 (41%), Positives = 69/111 (62%)

Query: 76  VASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRD 135
           +  +ER ++ S+LG+ P  +G V+R+ +P  TEE R  L K      E +K+++RNIRRD
Sbjct: 1   MKDIERALNASDLGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAIRNIRRD 60

Query: 136 GMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            MD  KK  K+ + +ED + +LE DIQK TD  +K+ID     K+KEI+  
Sbjct: 61  AMDEAKKQEKAKEITEDELKTLEKDIQKATDDAVKHIDEMTANKEKEILEV 111


>gi|118384524|ref|XP_001025410.1| ribosome recycling factor family protein [Tetrahymena thermophila]
 gi|89307177|gb|EAS05165.1| ribosome recycling factor family protein [Tetrahymena thermophila
           SB210]
          Length = 268

 Score =  134 bits (339), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 47/188 (25%), Positives = 95/188 (50%), Gaps = 11/188 (5%)

Query: 5   IDLQNIKDRMGDTISFLK--------KDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVA 56
           IDL  +++ M   +   K         ++  L+TGR++P M + + V AYG   PL ++ 
Sbjct: 80  IDLTPVEETMKAQLDHTKFIKYIINKAELAKLKTGRLTPDMFEKLSVVAYGEKTPLTELC 139

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPV-PETTEERRLALV 115
            +       + ++++D  +V ++ + +  S+L L    EG+++   +    T+E + A +
Sbjct: 140 QIVSKAVTTVQLNIYDDALVGAIHKILENSDLNLQLKREGKIITCTMVGGNTKEIKDATI 199

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           K A +  +K+K  +R  R+ G D +K  +K    SED +   E ++  I +  +  +D+ 
Sbjct: 200 KAAKSVVDKAKNLLRKHRQTGQDMIKGYKKFE--SEDFIKEAEKEVDNIHNKFVAELDNL 257

Query: 176 FEEKKKEI 183
            + K+KEI
Sbjct: 258 LKIKEKEI 265


>gi|167520356|ref|XP_001744517.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776848|gb|EDQ90466.1| predicted protein [Monosiga brevicollis MX1]
          Length = 253

 Score =  133 bits (337), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/173 (27%), Positives = 90/173 (52%), Gaps = 3/173 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L  ++D+    +  L  +  T+RTG V+P++LD VKV+   +   L+Q   V+V     L
Sbjct: 76  LDALQDKYHGQLQHLLNEYATIRTGEVTPNLLDGVKVKMGDATFALSQAGMVSVKNTDTL 135

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +V+ +D +   +    + ++N+  NP+ +  V+RI +P+ T+E R  +VK A    E++K
Sbjct: 136 IVTTFDSDTAKAAYEAVVDANIAPNPVRDDLVIRIQMPKLTKEYREQVVKRAKEMLEQTK 195

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
             +R++R   +  LK +      SED   +++  +  I    +   D  +E+K
Sbjct: 196 NKMRHLRSHAVSQLKGTE---GLSEDDTHAMQEYLDAINTHFVAQADEMYEKK 245


>gi|149019535|ref|ZP_01834854.1| ribosome recycling factor [Streptococcus pneumoniae SP23-BS72]
 gi|147930910|gb|EDK81890.1| ribosome recycling factor [Streptococcus pneumoniae SP23-BS72]
          Length = 111

 Score =  133 bits (337), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 46/111 (41%), Positives = 69/111 (62%)

Query: 76  VASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRD 135
           +  +ER ++ S LG+ P  +G V+R+ +P  TEE R  L K      E +K++VRNIRRD
Sbjct: 1   MKDIERALNASELGITPANDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAVRNIRRD 60

Query: 136 GMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            MD  KK  K+ + +ED + +LE DIQK+TD  +K+ID     K+KE++  
Sbjct: 61  AMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDDMTANKEKELLEV 111


>gi|145510568|ref|XP_001441217.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408456|emb|CAK73820.1| unnamed protein product [Paramecium tetraurelia]
          Length = 233

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 99/186 (53%), Gaps = 3/186 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +++ ID  + + +        ++ +  L+ G+++P MLD V ++AYG  +PL+ +A  + 
Sbjct: 49  LSKTIDFTSYQSKFDQYAQKFQEALKKLQVGKLTPEMLDRVSIQAYGEKLPLSSLAQASQ 108

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLN-PIVEGQVLRIPVPETTEERRLALVKVAH 119
               +L+++V+D+  +  V + +  S+L L     + Q++       T+E R+  V    
Sbjct: 109 KSQGVLILNVFDESTLMDVMKALENSDLNLQVKKQDKQIVCQLAQGNTKESRIMAVNNLK 168

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E +K ++R IR + +D LK  +K    SED +   E  IQ + +   +++DS ++ K
Sbjct: 169 KLMEDAKQNLRQIRHECIDDLKPYKK--VTSEDTMRQAEKQIQDLFEKQTQSLDSLYKSK 226

Query: 180 KKEIMH 185
           +KE+++
Sbjct: 227 EKELLN 232


>gi|307167406|gb|EFN60991.1| Ribosome-recycling factor, mitochondrial [Camponotus floridanus]
          Length = 212

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 94/185 (50%), Gaps = 5/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT- 59
           M +VID+  +  ++   I  +K D     + R +   ++ + V+  G    L ++A ++ 
Sbjct: 28  MEEVIDVNKLTSQLERAIEIMKDDFAKYLSIRSTVGAIEELSVKFEGKDYTLQELAQISR 87

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             +  +L +S +  + +  + + + ++ + LNP  +G  + +P+P+ T+E R +L K A 
Sbjct: 88  KPKLIVLNISTF-PQAIPDILKSLTKNQMNLNPQQDGTTVYVPIPKVTKEHRESLSKNAK 146

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
           ++  K   ++R+IR      +K  +     ++D++  +EN I  +++  +   +   E K
Sbjct: 147 SFYTKCCSNIRDIR---NKQIKTVKNKEGLAKDIIFRMENYIDILSNQYVSKAEQLLETK 203

Query: 180 KKEIM 184
           +KE++
Sbjct: 204 QKELL 208


>gi|16265934|gb|AAL16673.1|AF358685_1 ribosome releasing factor [Helicobacter hepaticus]
          Length = 96

 Score =  130 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 63/96 (65%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
            M  +I  L++D  TLR+G+VS ++LD V+V+ YG+  PLNQV +V   +   ++++ W+
Sbjct: 1   HMDKSIESLRRDFSTLRSGKVSVNILDNVRVDYYGTPTPLNQVGSVIAQDATTIIITPWE 60

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTE 108
           K ++  +E+ I E+N+G+NP  + + +++  P  T+
Sbjct: 61  KPLIKDIEKSIQEANIGVNPNSDSECVKLFFPPMTQ 96


>gi|156385498|ref|XP_001633667.1| predicted protein [Nematostella vectensis]
 gi|156220740|gb|EDO41604.1| predicted protein [Nematostella vectensis]
          Length = 191

 Score =  129 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 3/182 (1%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           ++D   IK  M  TI  LK+D  +  T ++ P  LD ++V        L ++A + +   
Sbjct: 10  LVDFSKIKANMESTIDKLKQDYTSKITVQILPDALDNIRVTTRSGKSTLAELAEIRMKGD 69

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
            M V+ +    +   +  + I ES +   P+V+   + I +P+ T+E R  LVK+A    
Sbjct: 70  NMFVIDMSSSPKDTKAAAQAIKESRINFEPVVDNTTITISIPKVTQEYRQDLVKLARQAC 129

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E+SK ++R +R+ GM  ++K+++    SED V  +E  IQ++TD    + D   EEK KE
Sbjct: 130 EQSKQNLRRVRQKGMADVRKNKQGR--SEDEVKQVEKMIQQLTDEYSSDTDLLVEEKTKE 187

Query: 183 IM 184
           ++
Sbjct: 188 LL 189


>gi|71003105|ref|XP_756233.1| hypothetical protein UM00086.1 [Ustilago maydis 521]
 gi|46096238|gb|EAK81471.1| hypothetical protein UM00086.1 [Ustilago maydis 521]
          Length = 183

 Score =  129 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 79/182 (43%), Gaps = 12/182 (6%)

Query: 14  MGDTISFLKKDMMTL--RTGRVSPSMLDLVKVEAYGSH-----VPLNQVANVTVLEPRML 66
           M   +   +    TL    GR  PS+LD +KVE           PL   A V V +  ++
Sbjct: 1   MSRAVERFRSTASTLVGSFGRADPSLLDSIKVEYPAGSSSKALHPLRDFATVGVRDGALI 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIV----EGQVLRIPVPETTEERRLALVKVAHAYA 122
            V+ +D +MV  +ER I+ SNL L P      E  VLR+ VP+ T E R ALVK      
Sbjct: 61  -VTAFDADMVKHIERAIYASNLNLTPQTQAGGEENVLRVAVPQPTTESRQALVKDLTKIC 119

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           E +++S+R+ R      +K         +         ++  T      +D  FE+ K  
Sbjct: 120 ENARVSIRDARHKAQKQIKSDIDRKVVGKSEGDRESKKVEAETKKWSTQVDHLFEKIKAT 179

Query: 183 IM 184
           ++
Sbjct: 180 LL 181


>gi|255660062|ref|ZP_05405471.1| ribosome recycling factor [Mycoplasma genitalium G37]
          Length = 161

 Score =  128 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 90/164 (54%), Gaps = 5/164 (3%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M +   +   K      I +LK+++  +RTGR +P + D + +E+YG  +PL  +A VT+
Sbjct: 1   MTKAHYIDFFKQAADKKIQWLKEELTKIRTGRPNPKIFDNLLIESYGQKMPLISLAQVTI 60

Query: 61  LEPRMLVVSVWDK-EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             PR +++  +D      ++   I  +N+G+ P+++G+ +R+  P+ T+E RL  +K   
Sbjct: 61  NPPREIIIKPFDPKSNTNAIYSEIQRANIGVQPVIDGEKIRVNFPQITQETRLENIKHVK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQK 163
              E+    +R +RRD +  +KK       +ED+  SL+ +I+K
Sbjct: 121 KIIEQIYQELRVVRRDALQMIKK----DNHNEDLENSLKAEIRK 160


>gi|119195787|ref|XP_001248497.1| hypothetical protein CIMG_02268 [Coccidioides immitis RS]
          Length = 291

 Score =  127 bits (320), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 13/195 (6%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGS--------HVPL 52
               D  ++ + + D +S LK+D+  LR G R++P +++ V+V    S         V L
Sbjct: 94  EDPFDFSSLSNGIQDALSRLKEDVSKLRVGGRLNPELIENVRVTLKTSASSGKEKETVRL 153

Query: 53  NQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN-LGLNPIVEGQ---VLRIPVPETTE 108
           +++A V     RM+ + V ++E +  +   +     L LNP  +      L +P+P  T 
Sbjct: 154 SELAQVIPKGGRMVTILVGEEEFIKPITSALQAVPSLSLNPQPDPHNKLQLNLPIPPPTR 213

Query: 109 ERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST 168
           E R   VK A A  EK+  SV+N R +    LK          D +      ++K+ +  
Sbjct: 214 ESRDQAVKDAKAAMEKASASVKNARANMNKKLKALGNKKAVRPDDLRKALEQMEKLAEKG 273

Query: 169 IKNIDSFFEEKKKEI 183
            K++   FE  KK +
Sbjct: 274 QKDVKDAFESAKKAL 288


>gi|303321624|ref|XP_003070806.1| ribosomal recycling factor, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240110503|gb|EER28661.1| ribosomal recycling factor, mitochondrial precursor, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320040287|gb|EFW22220.1| ribosome recycling factor [Coccidioides posadasii str. Silveira]
          Length = 291

 Score =  125 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 13/195 (6%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGS--------HVPL 52
               D  ++ + + D +S LK+D+  LR G R++P +++ V+V    S         V L
Sbjct: 94  EDPFDFSSLSNGIQDALSRLKEDVSKLRVGGRLNPELIENVRVTLKTSAGSGKEKETVRL 153

Query: 53  NQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN-LGLNPIVEGQ---VLRIPVPETTE 108
           +++A V     RM+ + V ++E +  +   +     L LNP  +      L +P+P  T 
Sbjct: 154 SELAQVIPKGGRMVTILVGEEEFIKPITSALQAVPSLSLNPQPDPHNKLQLNLPIPPPTR 213

Query: 109 ERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST 168
           E R   VK A A  E++  SV+N R +    LK          D +      ++K+ +  
Sbjct: 214 ESRDQAVKDAKAAMERASASVKNARANMNKKLKALGNKKAVRPDDLRKALEQMEKLAEKG 273

Query: 169 IKNIDSFFEEKKKEI 183
            K++   FE  KK +
Sbjct: 274 QKDVKDSFESAKKAL 288


>gi|331217075|ref|XP_003321216.1| hypothetical protein PGTG_02258 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309300206|gb|EFP76797.1| hypothetical protein PGTG_02258 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 267

 Score =  124 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 89/186 (47%), Gaps = 4/186 (2%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTL--RTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
            +  +   ++  M  T++ L++++  +  R GR++P+ LD +K+      + +N VA V 
Sbjct: 80  EERFNRNKVEKEMDMTVARLRQNVNLIVNRVGRLTPAYLDGIKLLHDHQRLGINSVAQVI 139

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ-VLRIPVPETTEERRLALVKVA 118
           V++   L V  +D     S+E+ ++ S L L P ++    L I +P  T + R  L K +
Sbjct: 140 VVDSNTLSVVPYDPSYTKSIEQALYGSTLNLAPKLQPDGSLSIAIPRLTIDTRKVLAKES 199

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E+++  +RNIR+      +    S   ++D     +  +  ++ +  K +D   E 
Sbjct: 200 GELCEQARAGIRNIRQAAQKASRNDLDSNLITKDDFKDNQKSLDNVSKTYGKLVDGI-ES 258

Query: 179 KKKEIM 184
           K K ++
Sbjct: 259 KSKAVL 264


>gi|328718680|ref|XP_001942916.2| PREDICTED: ribosome-recycling factor, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 176

 Score =  124 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 84/175 (48%), Gaps = 4/175 (2%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVS 69
           +K  M   ++ LK + +   + R S   LD + V   G    +  +A +    P+ ++++
Sbjct: 1   MKTEMEKAVAALKNNYIKNLSLRSSTGALDSLPVTFEGDEYVIQDLAQIVRKNPKTIILN 60

Query: 70  V-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +    + + +V   +  S + LNP  +   + IP+P+ T+E R  L K A A   K+K S
Sbjct: 61  MTSFPQAIPAVLESLKASGMNLNPQQDKTSIFIPIPKVTKEHRENLSKGAKALFIKTKDS 120

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++ ++     ++K  + +   + D+V +L++ I  + D  +       EEK+ E+
Sbjct: 121 IKELQ---NKNIKVLKDNDALATDLVHTLQDQITALADKYVLEAQRIMEEKQSEL 172


>gi|54020577|ref|YP_116060.1| ribosome recycling factor [Mycoplasma hyopneumoniae 232]
 gi|53987750|gb|AAV27951.1| ribosome releasing factor [Mycoplasma hyopneumoniae 232]
 gi|144227682|gb|AAZ44621.2| ribosome recycling factor [Mycoplasma hyopneumoniae J]
 gi|144575504|gb|AAZ53900.2| ribosome recycling factor [Mycoplasma hyopneumoniae 7448]
 gi|312601486|gb|ADQ90741.1| Ribosome recycling factor [Mycoplasma hyopneumoniae 168]
          Length = 186

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 4/172 (2%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++  D  S+L+K    +  G  +P ++  +KV  Y    P+N++A+++   P  L+V  +
Sbjct: 16  EKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLVKPY 75

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           + + V  +   I  + +      E   +R+  PE T ++R   +       E+ K+ +R 
Sbjct: 76  ETKYVKEIASAIVAAKIDAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVRMRL 135

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           IR+D    +KK     + SED+       +QK  +S I+ ID  F++K K I
Sbjct: 136 IRQDINKLIKK----EEFSEDLEKDYLGQVQKNINSEIEKIDQLFDKKVKAI 183


>gi|71893886|ref|YP_279332.1| ribosome recycling factor [Mycoplasma hyopneumoniae J]
 gi|72080865|ref|YP_287923.1| ribosome recycling factor [Mycoplasma hyopneumoniae 7448]
          Length = 174

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 4/172 (2%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++  D  S+L+K    +  G  +P ++  +KV  Y    P+N++A+++   P  L+V  +
Sbjct: 4   EKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLVKPY 63

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           + + V  +   I  + +      E   +R+  PE T ++R   +       E+ K+ +R 
Sbjct: 64  ETKYVKEIASAIVAAKIDAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVRMRL 123

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           IR+D    +KK     + SED+       +QK  +S I+ ID  F++K K I
Sbjct: 124 IRQDINKLIKK----EEFSEDLEKDYLGQVQKNINSEIEKIDQLFDKKVKAI 171


>gi|289809014|ref|ZP_06539643.1| ribosome recycling factor [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 91

 Score =  120 bits (303), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 36/91 (39%), Positives = 57/91 (62%)

Query: 96  GQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
           G  +R+P+P  TEERR  L K+    AE+++++VRN+RRD  D +K   K    SED   
Sbjct: 1   GTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDR 60

Query: 156 SLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
             + ++QK+TD+ IK +D+   +K+ E+M F
Sbjct: 61  RSQEEVQKMTDAAIKKVDAALADKEAELMQF 91


>gi|242798810|ref|XP_002483245.1| ribosome recycling factor, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218716590|gb|EED16011.1| ribosome recycling factor, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 289

 Score =  120 bits (303), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 48/186 (25%), Positives = 92/186 (49%), Gaps = 7/186 (3%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE-AYGS--HVPLNQVANV 58
              +   ++  + D ++ LK+D+  LR+G R +P +++ ++V    GS   V L++VA V
Sbjct: 99  DPFNFSQLQTGISDALTRLKEDLQKLRSGGRFNPEVIEQLRVNLVKGSNETVRLSEVAQV 158

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALV 115
                R + + V ++++V  V   I  SNL L P  +      L +P+P  T+E R   +
Sbjct: 159 VPKGGRAVTIIVGEEDLVKPVNSAIISSNLSLTPQPDAHNPLQLNVPIPPPTKESRDQAI 218

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           K A    +K+  +VR+ R      L+  +K  +A  D +    + ++K+ +   K++   
Sbjct: 219 KAAKGAMDKAANAVRSARASVHKRLQDMQKKKEARPDDIRKAHDQMEKLVEKAQKDVKDT 278

Query: 176 FEEKKK 181
           FE  +K
Sbjct: 279 FESARK 284


>gi|328850981|gb|EGG00140.1| hypothetical protein MELLADRAFT_39912 [Melampsora larici-populina
           98AG31]
          Length = 177

 Score =  120 bits (301), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 5/175 (2%)

Query: 14  MGDTISFLKKDMMTL--RTGRVSPSMLDLVKVEAYGS-HVPLNQVANVTVLEPRMLVVSV 70
           M   +S L+ ++ ++  R GR++P+ LD +KVE  G    P+  +A V VL+P  L V  
Sbjct: 1   MNSGVSKLRVEIKSIVNRVGRLTPAYLDGLKVEIEGGIRSPIEGLAQVIVLDPTKLSVVA 60

Query: 71  WDKEMVASVERGIHESNLGLNPIVEGQ-VLRIPVPETTEERRLALVKVAHAYAEKSKISV 129
           +D      +E+ +++S+L L P ++    + + +P+ T E R  L K A    E+++  +
Sbjct: 61  YDASHTKMIEQALYDSSLNLTPNLQPDGSIHLAIPKLTTESRQLLSKKAGQVCEQARSVI 120

Query: 130 RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           RN R+      +K       ++D   S    + +IT +  K +D   E K K ++
Sbjct: 121 RNSRQLAQKASRKDLDGNLITKDDFKSNNKVLDEITKAHTKLVDEI-ENKSKRVL 174


>gi|190347462|gb|EDK39732.2| hypothetical protein PGUG_03830 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 255

 Score =  119 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 12/189 (6%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  + K +M + I    K     + GR SPS+ D + V+      P   VA  ++   R
Sbjct: 71  IDFDDAKRKMNEVIEKFSKSANEAKLGRTSPSIFDHLSVDTEFGPQPFTSVAQTSIK-GR 129

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVE---GQVLRIPVPETTEERRLALVKVAHAY 121
             +++V+D     S+   +  SNL +NP V+      L++P+P  T E +    K     
Sbjct: 130 NFLITVFDTANSQSIINAVLGSNLNMNPQVDPSNKSALKVPLPPLTVESKKESAKQLKGV 189

Query: 122 AEK-----SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
            EK      K+++ +IR +       ++K  K S+D    L  D +K+    +  +   F
Sbjct: 190 YEKFKNGSGKLTLASIRAEVRTK--FTKKKKKLSDDEEKML-KDFEKLHKEYVDKLSDSF 246

Query: 177 EEKKKEIMH 185
           +  +  I+ 
Sbjct: 247 KSAESVILK 255


>gi|258575539|ref|XP_002541951.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237902217|gb|EEP76618.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 249

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 10/192 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLR-TGRVSPSMLDLVKVEAYGSHV-----PLNQV 55
              +D  ++ + + D +S LK+D+  LR  GR++P +++ V+V             LN++
Sbjct: 55  EDPLDFSSLTNGIQDAVSRLKEDISKLRPGGRLNPELIENVRVTVKSGSTGKESVKLNEL 114

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHESN-LGLNPIVEGQ---VLRIPVPETTEERR 111
           A V     R + + + +++    V   +     L LNP  +      L +P+P  T E R
Sbjct: 115 AQVIPKGGRTITILLGEEDYAKPVTSALQAMPSLSLNPQQDPHNKLQLNVPIPPPTRESR 174

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
             ++K A A  EK+  +V+N R +     K +        D +      ++KIT    K 
Sbjct: 175 DQVLKEAKAAMEKASTTVKNARANLNKKFKAAGNKKVVRPDDLHKALEQMEKITAKGQKE 234

Query: 172 IDSFFEEKKKEI 183
           +   FE  KK +
Sbjct: 235 VKDAFEAAKKAL 246


>gi|255948524|ref|XP_002565029.1| Pc22g10210 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592046|emb|CAP98309.1| Pc22g10210 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 269

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 7/188 (3%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGSH---VPLNQVANV 58
              DL  + + +   ++ LK D+  LR G R + ++L+ ++V+        V L  +A V
Sbjct: 79  DPFDLSQLHNGISTAVARLKDDLSKLRAGGRFNTAVLESLRVQLSKDSKDSVKLGDLAQV 138

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALV 115
                RM+ +   +++ +  +   I  SNL L P  +      L IP+P  T+E R   V
Sbjct: 139 VPKGGRMVTLLAAEEDHLKPLTSAIVSSNLSLTPQPDPHNALQLNIPIPPPTKESRDKNV 198

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           + A    EK+   VR+ R      L+  +K   A  D V    + ++K+T+   K +   
Sbjct: 199 QAAKQAFEKAAGVVRDSRGAMHKRLQDMQKKKLARPDDVRKAHDQMEKVTEQGQKEVKDA 258

Query: 176 FEEKKKEI 183
           FE  KK +
Sbjct: 259 FEGAKKTL 266


>gi|238508549|ref|XP_002385466.1| Hsp70 chaperone (HscA), putative [Aspergillus flavus NRRL3357]
 gi|220688985|gb|EED45337.1| Hsp70 chaperone (HscA), putative [Aspergillus flavus NRRL3357]
          Length = 886

 Score =  117 bits (294), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 8/191 (4%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE-AYGSH--VPLNQVAN 57
               DL  + D +   +  LK D+  LR G R++   +  ++V+ + G    V L ++A 
Sbjct: 695 EDPYDLAQLHDGIAAAVCRLKDDLSKLRVGGRLNTDAIASLRVQLSKGGKETVKLGELAQ 754

Query: 58  VTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLAL 114
           V     RM+ +   +++ +  +   +  S+L L P  +      L IP+P  T+E R   
Sbjct: 755 VVPKGGRMVTILATEEDHIKPITSAVVSSDLSLTPQPDAHNSLQLNIPIPPPTKESRDQT 814

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           V VA A  EK+  +VR+ R      L+  +K   A  D V   +  ++K+T+   + +  
Sbjct: 815 VSVAKAAMEKATAAVRDSRGSVHKRLQDMQKKKIARPDDVRKAQEQMEKVTEKGQREVRD 874

Query: 175 FFEEKKKEIMH 185
            FE  KK  M 
Sbjct: 875 LFEAAKKA-ME 884


>gi|317157882|ref|XP_003190900.1| ribosome recycling factor [Aspergillus oryzae RIB40]
          Length = 272

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 8/191 (4%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE-AYGSH--VPLNQVAN 57
               DL  + D +   +  LK D+  LR G R++   +  ++V+ + G    V L ++A 
Sbjct: 81  EDPYDLAQLHDGIAAAVCRLKDDLSKLRVGGRLNTDAIASLRVQLSKGGKETVKLGELAQ 140

Query: 58  VTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLAL 114
           V     RM+ +   +++ +  +   +  S+L L P  +      L IP+P  T+E R   
Sbjct: 141 VVPKGGRMVTILATEEDHIKPITSAVVSSDLSLTPQPDAHNSLQLNIPIPPPTKESRDQT 200

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           V VA A  EK+  +VR+ R      L+  +K   A  D V   +  ++K+T+   + +  
Sbjct: 201 VSVAKAAMEKATAAVRDSRGSVHKRLQDMQKKKIARPDDVRKAQEQMEKVTEKGQREVRD 260

Query: 175 FFEEKKKEIMH 185
            FE  KK  M 
Sbjct: 261 LFEAAKKA-ME 270


>gi|242022121|ref|XP_002431490.1| ribosome recycling factor, putative [Pediculus humanus corporis]
 gi|212516778|gb|EEB18752.1| ribosome recycling factor, putative [Pediculus humanus corporis]
          Length = 248

 Score =  116 bits (291), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 4/185 (2%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N+ ++ + + D +   I   K D++   + R S   ++  K+   G+   +  +A +  
Sbjct: 62  LNEYLNFEKLIDDINRPIESFKDDLIQQVSLRSSIGAIENTKIVYDGNPYTIQDLAEINK 121

Query: 61  LEPRMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
             P+M V+      + + +V +   ES+L LN   EG  L +P+P+ T E R  L K A 
Sbjct: 122 KNPKMFVLDFSCFPDAIGTVVKTFQESHLNLNVQQEGTKLIVPIPKVTREHRELLAKKAK 181

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
            Y  K K S+R ++      L    K G  SE +   +   +  + D  IK  +   + K
Sbjct: 182 MYFVKCKDSIREVQMKYTKKLNNVEKLG--SE-VKFRITEQLVALGDKHIKIAEDMLKNK 238

Query: 180 KKEIM 184
           + E++
Sbjct: 239 QNELL 243


>gi|156053600|ref|XP_001592726.1| predicted protein [Sclerotinia sclerotiorum 1980]
 gi|154703428|gb|EDO03167.1| predicted protein [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 288

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 8/188 (4%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEA---YGSHVPLNQVAN 57
           N   D   ++  +  ++  LK D+  LRTG R +P +L+ ++V+          L  +A 
Sbjct: 96  NDPFDFSTLQTGIDKSLEKLKNDLGKLRTGGRFNPEVLEGLRVKLGKDAKESFRLGDLAQ 155

Query: 58  VTVLEPRMLVVSVWDKEMVASVERGIHESN-LGLNPIVEGQ---VLRIPVPETTEERRLA 113
           V     R +VV V +K+ +  +   I  S  L L P+ + Q    L IP+P  T+E R A
Sbjct: 156 VLPKGGRSVVVLVGEKDHIKPILSTIQSSPTLSLQPVPDPQNPHALNIPIPPPTKESRDA 215

Query: 114 LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
            ++ A    E +   VRN R      L+          D       +++K+ +     + 
Sbjct: 216 ALQAASKAGELASNGVRNARGAMQKKLRAMEVKKTVRPDDSKKAHKEMEKVVEKGNGEVK 275

Query: 174 SFFEEKKK 181
              E  +K
Sbjct: 276 KLVEAARK 283


>gi|299783102|gb|ADJ41100.1| Ribosome recycling factor [Lactobacillus fermentum CECT 5716]
          Length = 97

 Score =  115 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/96 (41%), Positives = 63/96 (65%)

Query: 90  LNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKA 149
           + P  +G+ +R+ VP+ TE+RR  LVK   A  EK+K++VRN+RR+ MD LKK  K G  
Sbjct: 1   MTPQNDGETIRLVVPQLTEDRRKELVKDVKAEMEKAKVAVRNVRREAMDDLKKGNKDGDF 60

Query: 150 SEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           ++D    LE  +Q+ TD+ IKN++    +K+KE++ 
Sbjct: 61  NDDEFHDLEKQVQEETDAGIKNLEQIAADKEKELLE 96


>gi|332832792|ref|XP_001135581.2| PREDICTED: ribosome-recycling factor, mitochondrial isoform 1 [Pan
           troglodytes]
          Length = 275

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 1/108 (0%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 154 EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 213

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTE 108
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P++ +
Sbjct: 214 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQSAK 261


>gi|332229923|ref|XP_003264136.1| PREDICTED: ribosome-recycling factor, mitochondrial-like isoform 2
           [Nomascus leucogenys]
          Length = 275

 Score =  114 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 1/108 (0%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 154 EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 213

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTE 108
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P++ +
Sbjct: 214 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQSAK 261


>gi|146416959|ref|XP_001484449.1| hypothetical protein PGUG_03830 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 255

 Score =  113 bits (284), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 12/189 (6%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  + K +M + I    K     + GR SP + D + V+      P   VA  ++   R
Sbjct: 71  IDFDDAKRKMNEVIEKFSKLANEAKLGRTSPLIFDHLSVDTEFGPQPFTSVAQTSIK-GR 129

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVAHAY 121
             +++V+D     S+   +  SNL +NP V+      L++P+P  T E +    K     
Sbjct: 130 NFLITVFDTANSQSIINAVLGSNLNMNPQVDPSNKLALKVPLPPLTVESKKESAKQLKGV 189

Query: 122 AEK-----SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
            EK      K+++ +IR +     K ++K  K S+D    L  D +K+    +  +   F
Sbjct: 190 YEKFKNGSGKLTLASIRAEV--RTKFTKKKKKLSDDEEKML-KDFEKLHKEYVDKLSDSF 246

Query: 177 EEKKKEIMH 185
           +  +  I+ 
Sbjct: 247 KSAELVILK 255


>gi|327352864|gb|EGE81721.1| ribosome recycling factor [Ajellomyces dermatitidis ATCC 18188]
          Length = 304

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 11/193 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLN 53
           +       +++ +   +  LK D+  LR G R +P  ++ ++V     +  GS   V L 
Sbjct: 110 DDPFGFSQLENDIAGAVQRLKDDISKLRAGGRFNPEAIETLRVAVSKGDGKGSKETVKLG 169

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEER 110
           ++A V     RML + V ++E +  +   +  S+L LNP  +      L +P+P  T+E 
Sbjct: 170 ELAQVIPKGGRMLTILVGEEEYIKPITSSLLSSSLSLNPQPDPHNSLQLNVPIPPPTKES 229

Query: 111 RLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
           R   VK A A  +K+  +VRN R      LK          D +      ++KI +   K
Sbjct: 230 RDQSVKDAKAAMDKASTAVRNARGAINKKLKNMGVKKLVRPDDLHKQVEKMEKIAEKGQK 289

Query: 171 NIDSFFEEKKKEI 183
            +   FE  KK +
Sbjct: 290 EVKDVFEAAKKAL 302


>gi|299749683|ref|XP_001836265.2| hypothetical protein CC1G_06350 [Coprinopsis cinerea okayama7#130]
 gi|298408550|gb|EAU85637.2| hypothetical protein CC1G_06350 [Coprinopsis cinerea okayama7#130]
          Length = 254

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 16/181 (8%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRT---GRVSPSMLDLVKVEAYGSH--VPLNQVANVTVLE 62
              +  M + + + KK+     T   GR++P++L  V+V+         L ++A V V E
Sbjct: 78  AKAETTMKNAVDWFKKECAGYETRASGRITPAILSPVRVKLGSDPKDYRLEELATVGVRE 137

Query: 63  PRMLVVSVWDKEMVASVERGIHESNL-GLNP-IVEGQVLRIPVPETTEERRLALVKVAHA 120
              L+++++D+  +  +E  +H   + G+ P   + + +++P+P+ T E RL+L   A  
Sbjct: 138 GSTLLITLFDEHNMKHIESALHTCGIPGVVPHRQDNRTIKVPIPKPTVESRLSLYAAAKK 197

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++ VR   R     LK+ +    + E        + QK+TD  I  +D   ++ +
Sbjct: 198 KAEEIRVQVR---RQHSTSLKRGKFEKHSIE------IEEFQKLTDRYIGEVDKILKDLQ 248

Query: 181 K 181
           K
Sbjct: 249 K 249


>gi|256370721|ref|YP_003108546.1| putative ribosome recycling factor [Candidatus Sulcia muelleri
           SMDSEM]
 gi|256009513|gb|ACU52873.1| putative ribosome recycling factor [Candidatus Sulcia muelleri
           SMDSEM]
          Length = 182

 Score =  112 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 99/180 (55%), Gaps = 3/180 (1%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +K  + + I   K+ +  +R G+++ S+LD V ++ YG  V +  ++N+++L+ R L
Sbjct: 6   INGLKSEIKNKILGFKQKLFKIRIGKINESILDDVTIDLYGKKVQIKTISNISILDARTL 65

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
           +++ W+++ +  + + + ++++   P   G+VL++ + + TEE R  L+K  +   E  K
Sbjct: 66  LITPWEEKNINIIYKALLKNSILYTPYKTGKVLKLKMAQLTEETRKELIKKINFILEIFK 125

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           I++R +R+     +KK  K     +D +   + +IQ + +  I ++      KKKEI+  
Sbjct: 126 INLRKLRK---KTIKKLNKINSLEKDCLKKNKIEIQNLINDCINSMKIISNRKKKEILTI 182


>gi|328779227|ref|XP_623856.3| PREDICTED: ribosome-recycling factor, mitochondrial-like [Apis
           mellifera]
          Length = 205

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 3/184 (1%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +  +I + ++  R   TI   K  M+     R     ++ + +        L ++  +  
Sbjct: 23  IRDIIKVDHMISRFDGTIEKYKDQMIKNLPLRTRIGAIEQLTITFEDEEHKLEELVEINR 82

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
               +++      ++V S+   + +S + LNP  EG  + IP+P+ T+E R  L K+A  
Sbjct: 83  KPNMIILNVSAFPQIVPSILEALSKSQMNLNPQQEGTTIYIPIPKITKEHREVLTKMAKQ 142

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
           Y  K K  + +IR + +  LK       A +D++   E+ I       +K  +   + K+
Sbjct: 143 YFNKCKDIISDIRNEYVKELKNYE---NAPKDLIFKAEDYINVTQKEYVKKAEQLLKSKQ 199

Query: 181 KEIM 184
           KE++
Sbjct: 200 KELL 203


>gi|50424817|ref|XP_460998.1| DEHA2F14630p [Debaryomyces hansenii CBS767]
 gi|60390377|sp|Q6BLC3|RRF1_DEBHA RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|49656667|emb|CAG89364.1| DEHA2F14630p [Debaryomyces hansenii]
          Length = 257

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 12/191 (6%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID  +  ++    I    K     + G+ SP++ D + VE     V    VA  TV   R
Sbjct: 69  IDFDDATNKFKGVIERFSKQANEAKLGKTSPNIFDKLIVETANGEVGFTSVAQTTVK-GR 127

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVE---GQVLRIPVPETTEERRLALVKVAHAY 121
             +++V+D   V S+   +  S+L +NP ++    Q L++P+P  T E +    K     
Sbjct: 128 NFMITVFDPSNVKSIINAVLGSDLNMNPQIDPSNKQTLKVPLPPLTTESKKENAKQLKLV 187

Query: 122 AEKSKI-------SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
            E+ K        S+  IR D  +  +K  K  K S D    +  D +K+       +  
Sbjct: 188 YERFKNGSGRANGSLATIRGDVKNKFQKQHKKKKLS-DAEEKVFKDFEKLHKQYTDKLTE 246

Query: 175 FFEEKKKEIMH 185
            F+  ++ I+ 
Sbjct: 247 VFKSAEQAILK 257


>gi|225711692|gb|ACO11692.1| Ribosome recycling factor, mitochondrial precursor [Caligus
           rogercresseyi]
          Length = 260

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 4/183 (2%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEP 63
           +I L++    +  +   L        T R S + LD + +   G   PL+++A ++  + 
Sbjct: 76  MIRLEDYWSELQGSYDDLMDHFANNLTMR-STNSLDKLPINFEGDVYPLHELAQISKKDA 134

Query: 64  RMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           + L++       +V+ V + I ESN+ L P  +G  L +P+P+ T E R  L K A A  
Sbjct: 135 KRLIIDCSSFPGLVSPVSKAISESNMNLRPQADGDRLFVPIPKVTREYREQLSKGAKASF 194

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGK--ASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            K+K   R I+ + +   +    S +    +D    +E  I+ + +      +   + K+
Sbjct: 195 LKAKEGFRRIQNNYISAAQNVAMSPECRVPKDKQHMVEEIIRSVANDFAHRAEEILKTKQ 254

Query: 181 KEI 183
           +EI
Sbjct: 255 EEI 257


>gi|312876744|ref|ZP_07736723.1| ribosome recycling factor [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796475|gb|EFR12825.1| ribosome recycling factor [Caldicellulosiruptor lactoaceticus 6A]
          Length = 84

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 30/80 (37%), Positives = 50/80 (62%)

Query: 7  LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
          +Q  +++M   I  LK++  T+R GR +P +LD V V+ YG   P+ QVA++TV E RM+
Sbjct: 5  IQVAEEKMKKAIETLKEEFATVRAGRANPHILDKVMVDYYGVPTPIPQVASITVPEARMI 64

Query: 67 VVSVWDKEMVASVERGIHES 86
          V+  W+  M+  +E+ I + 
Sbjct: 65 VIQPWEARMLKEIEKAIQKI 84


>gi|40317624|ref|NP_954646.1| ribosome-recycling factor, mitochondrial isoform 2 precursor [Homo
           sapiens]
 gi|56078380|gb|AAH53604.1| Mitochondrial ribosome recycling factor [Homo sapiens]
 gi|119607934|gb|EAW87528.1| mitochondrial ribosome recycling factor, isoform CRA_g [Homo
           sapiens]
          Length = 201

 Score =  110 bits (277), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 1/108 (0%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 80  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTE 108
            P++++V++    E  A+  + I ES + LNP VEG ++R+P+P++ +
Sbjct: 140 SPQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQSAK 187


>gi|326471947|gb|EGD95956.1| ribosome recycling factor [Trichophyton tonsurans CBS 112818]
          Length = 295

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 23/204 (11%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYG------------- 47
               D  ++ D + D ++ LK+D+  LR+G RV+P  ++ ++V  +              
Sbjct: 91  EDPFDFSSLNDSIKDAVTRLKEDLAKLRSGGRVTPEAIENLRVSLHKPGGADVGKGKKGA 150

Query: 48  -----SHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VL 99
                  V L +VA+V     R + + V ++  V  V   I  S+L LNP  +      L
Sbjct: 151 SSSSKETVKLGEVASVIPKGGRSVSILVGEEHDVKPVMSAITSSDLSLNPQTDPHNPLQL 210

Query: 100 RIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN 159
            +P+P  T+E R   V+ A    EK+   VRN R   ++   K ++  K   D V    +
Sbjct: 211 NVPIPPPTKESREQTVRDAKVAMEKASNIVRNGRA-ALNKKLKGKELKKLRPDDVRKAVD 269

Query: 160 DIQKITDSTIKNIDSFFEEKKKEI 183
            ++KI +   K +   FE  KK +
Sbjct: 270 QMEKIAEKGQKEVKDVFEAAKKAL 293


>gi|302506647|ref|XP_003015280.1| hypothetical protein ARB_06403 [Arthroderma benhamiae CBS 112371]
 gi|291178852|gb|EFE34640.1| hypothetical protein ARB_06403 [Arthroderma benhamiae CBS 112371]
          Length = 295

 Score =  108 bits (271), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 23/204 (11%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYG------------- 47
               D  ++ D + D ++ LK+D+  LR G RV+P  ++ ++V  +              
Sbjct: 91  EDPFDFSSLNDSIKDAVTRLKEDLAKLRGGGRVTPEAIENLRVSLHKPGGADVGKGKKGA 150

Query: 48  -----SHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VL 99
                  V L +VA+V     R + + V ++  V  V   I  S+L LNP  +      L
Sbjct: 151 SSSSKETVKLGEVASVIPKGGRSVSILVGEEHDVKPVMSAITSSDLSLNPQPDPHNPLQL 210

Query: 100 RIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN 159
            +P+P  T+E R   VK A    EK+   VRN R   ++   K ++  K   D V    +
Sbjct: 211 NVPIPPPTKESREQTVKDAKVAMEKASNIVRNGRA-ALNKKLKGKELKKLRPDDVRKAID 269

Query: 160 DIQKITDSTIKNIDSFFEEKKKEI 183
            ++KI +   K +   FE  KK +
Sbjct: 270 QMEKIAEKGQKEVKDVFEAAKKAL 293


>gi|50305425|ref|XP_452672.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|60390379|sp|Q6CTR7|RRF1_KLULA RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|49641805|emb|CAH01523.1| KLLA0C10593p [Kluyveromyces lactis]
          Length = 241

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 86/195 (44%), Gaps = 18/195 (9%)

Query: 3   QVIDLQ----NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           ++ID++    +   +   T+   K+ +   + G  SP++ + ++V   G      ++A  
Sbjct: 52  EIIDVKKYVIDATKQFEKTLELHKRKLAEQKVGTASPTIFNDLRVGKEGQK--FTELAAT 109

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPI---VEGQVLRIPVPETTEERRLALV 115
           ++     L+V+V+D +   ++   I  + L LNP       Q L++ +P  T E R A+ 
Sbjct: 110 SLKGRNALIVTVFDPKDTKNIVSAIMAAGLNLNPERIPNNDQQLKVSLPPITTETRQAVC 169

Query: 116 KVAHAYAEKS-----KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
           K      E       K S+ ++R + M  LK  +K      D V  +  D++KI      
Sbjct: 170 KDLKKVFEDYKHSALKESLGHVRGEIMKELKHLQKKN----DDVKKVIQDVEKIHKEYTI 225

Query: 171 NIDSFFEEKKKEIMH 185
            +    ++ +K +M+
Sbjct: 226 KLQEQLKQAEKSVMN 240


>gi|302666357|ref|XP_003024779.1| hypothetical protein TRV_01061 [Trichophyton verrucosum HKI 0517]
 gi|291188849|gb|EFE44168.1| hypothetical protein TRV_01061 [Trichophyton verrucosum HKI 0517]
          Length = 295

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 23/204 (11%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYG------------- 47
               D  ++ D + D ++ LK+D+  LR G RV+P  ++ ++V  +              
Sbjct: 91  EDPFDFSSLNDSIKDAVTRLKEDLAKLRGGGRVTPEAIENLRVSLHKPGGADVGKGKKGA 150

Query: 48  -----SHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VL 99
                  V L +VA+V     R + + V ++  V  V   I  S+L LNP  +      L
Sbjct: 151 SSSSKETVKLGEVASVIPKGGRSVSILVGEEHDVKPVMSAITSSDLSLNPQPDPHNPLQL 210

Query: 100 RIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN 159
            +P+P  T+E R   VK A    EK+   VRN R   ++   K ++  K   D V    +
Sbjct: 211 NVPIPPPTKESREQTVKDAKVAMEKASNIVRNGRA-ALNKKLKGKELKKLRPDDVRKAID 269

Query: 160 DIQKITDSTIKNIDSFFEEKKKEI 183
            ++KI +   K +   FE  KK +
Sbjct: 270 QMEKIAEKGQKEVKDVFEAAKKAL 293


>gi|326477187|gb|EGE01197.1| ribosome recycling factor [Trichophyton equinum CBS 127.97]
          Length = 295

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 23/204 (11%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYG------------- 47
               D  ++ D + D ++ LK+D+  LR+G RV+P  ++ ++V  +              
Sbjct: 91  EDPFDFSSLNDSIKDAVTRLKEDLAKLRSGGRVTPEAIENLRVSLHKPGGADVGKGKKGA 150

Query: 48  -----SHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VL 99
                  V L +VA+V     R + + V ++  V  V   I  S+L LNP  +      L
Sbjct: 151 SSSSKETVKLGEVASVIPKGGRSVSILVGEEHDVKPVMSAITSSDLSLNPQTDPHNPLQL 210

Query: 100 RIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN 159
            +P+P  T+E R   V+ A    EK+   VRN R   ++   K ++  K   D V    +
Sbjct: 211 NVPIPPPTKESREQTVRDAKVAMEKASNIVRNGRA-ALNKKLKGKELKKLRPDDVRKAVD 269

Query: 160 DIQKITDSTIKNIDSFFEEKKKEI 183
            ++KI +   K +   FE  KK +
Sbjct: 270 QMEKIAEKGQKEVKDVFEAVKKAL 293


>gi|121719597|ref|XP_001276497.1| ribosome recycling factor, putative [Aspergillus clavatus NRRL 1]
 gi|119404709|gb|EAW15071.1| ribosome recycling factor, putative [Aspergillus clavatus NRRL 1]
          Length = 251

 Score =  108 bits (270), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 7/189 (3%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV---EAYGSHVPLNQVAN 57
               DL +++  +   +S L+ D+  LR G R +   L+ ++V   +     + L  +A 
Sbjct: 60  EDPYDLSSLQAGISTVVSRLRDDLSKLRIGGRFNTESLENLRVCLSKGSKDTLRLGDLAQ 119

Query: 58  VTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLAL 114
           V     R + +   ++E +  V   I  SNL L P  +      L I +P  T+E R   
Sbjct: 120 VVPKGGRTVTILASEEEHIKPVTSAIVSSNLSLTPQPDAHNALQLNILIPPPTKELRDQT 179

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           V +A A  +K+  ++R  R      L+  +K   A  D V   ++ ++K+T+   K +  
Sbjct: 180 VAIAKAAMDKAAGAIRESRSVAHKRLQDMQKKKIARPDDVRKAQDQMEKLTERGQKEVKE 239

Query: 175 FFEEKKKEI 183
            F+  +K +
Sbjct: 240 LFDTTRKAL 248


>gi|170096781|ref|XP_001879610.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164645013|gb|EDR09261.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 227

 Score =  108 bits (270), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 16/181 (8%)

Query: 8   QNIKDRMGDTISFLKKDMMT--LR-TGRVSPSMLDLVKVEAYGSH--VPLNQVANVTVLE 62
              +  M     + +K+  +  +R +GRV+P++L  V+V+   +     L ++A V V +
Sbjct: 50  DKAETAMKTAAEWFRKECASSEVRASGRVTPALLSPVRVKLPSAEKEFKLEELATVGVRD 109

Query: 63  PRMLVVSVWDKEMVASVERGIHESNL-GLNP-IVEGQVLRIPVPETTEERRLALVKVAHA 120
              L+++++D+  +  VE  +H   + G+ P   + + ++IP+P+ T + R AL   A  
Sbjct: 110 GTTLLITLFDEHTIKHVESALHTCKIPGVVPHRYDDRTIKIPIPKPTVDARHALYAAAKR 169

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            AE+ ++ +R            S K GK  +  V     + QK+TD  I  +D      +
Sbjct: 170 KAEEMRVQIR-------KQHSLSVKRGKFEKHSVE--LEEFQKLTDRYIGEVDKVLANLQ 220

Query: 181 K 181
           K
Sbjct: 221 K 221


>gi|315046034|ref|XP_003172392.1| hypothetical protein MGYG_04984 [Arthroderma gypseum CBS 118893]
 gi|311342778|gb|EFR01981.1| hypothetical protein MGYG_04984 [Arthroderma gypseum CBS 118893]
          Length = 295

 Score =  108 bits (270), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 23/204 (11%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAY---GSHV------- 50
               D  ++ D + D ++ LK+D+  LR G RV+P  ++ ++V  +   G+ V       
Sbjct: 91  EDPFDFSSLHDSIKDAVTRLKEDLSKLRGGGRVTPEAIENLRVSLHKVGGAEVGKGKKGA 150

Query: 51  --------PLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VL 99
                    L ++A+V     R + + V ++  V  V   I  S+L LNP  +      L
Sbjct: 151 SSSSKDTARLGEIASVIPKGGRSVSILVGEEHDVKPVMSAITASDLSLNPQADPHNPLQL 210

Query: 100 RIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN 159
            + +P  T+E R   VK A A  EK+   VRN R   ++   K +   KA  D V    +
Sbjct: 211 NVAIPPPTKESREQTVKDAKAAMEKASNIVRNGRA-ALNKKLKGKDLKKARPDDVRKAVD 269

Query: 160 DIQKITDSTIKNIDSFFEEKKKEI 183
            ++KI +   K++   FE  KK +
Sbjct: 270 QMEKIAEKGQKDVKDVFEAAKKAL 293


>gi|254573108|ref|XP_002493663.1| Mitochondrial ribosome recycling factor [Pichia pastoris GS115]
 gi|238033462|emb|CAY71484.1| Mitochondrial ribosome recycling factor [Pichia pastoris GS115]
          Length = 247

 Score =  107 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 16/186 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+ I+DR   T+   +K +  ++ G+ +P + D +KV       P   VA  T    R L
Sbjct: 69  LKEIEDRFKLTLQEHQKKINEIKLGKSNPKIFDSLKVSIAKDLQPFPSVAQTTSK-GRNL 127

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVE---GQVLRIPVPETTEERRLALVKVAHAYAE 123
           +V+V+D  +V  V   I  S L LNP V+    Q+L++P+   T E +   +K      E
Sbjct: 128 LVTVFDPSLVKYVVSSILSSGLNLNPEVDPKNPQLLKVPLTAPTAETKKETLKALKNNLE 187

Query: 124 KSKISVRN------IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFE 177
             + S+ N      IR   +   K ++      ED +  L N+I+K+      +I   F+
Sbjct: 188 HYRHSITNKHSLASIRAHYLKEFKGNK------EDSIKKLVNEIEKVHKDYSNSIHEQFK 241

Query: 178 EKKKEI 183
           + +K +
Sbjct: 242 KVEKTL 247


>gi|198419631|ref|XP_002119431.1| PREDICTED: similar to mitochondrial ribosome recycling factor
           [Ciona intestinalis]
          Length = 270

 Score =  107 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 85/187 (45%), Gaps = 8/187 (4%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMT-LRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
            +V+DL  +++ M   + FL+       + G    S+ + + +       PLN++  ++ 
Sbjct: 87  EEVLDLLEVENEMKKCVLFLQDAYTKEFKVG-ADLSIFEQMTINIENDQYPLNEIGQISK 145

Query: 61  LEPRMLVVSV-WDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
              RM+VV +    + +   E  I +SN+ LNP   G ++++ +P+ T E R  + K A 
Sbjct: 146 PTQRMIVVDMESFPQYIKEAEAVIRDSNMNLNPNTTGTLIKVAIPQVTAEYRQLVAKKAK 205

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGK-ASEDMVASLENDIQKITDSTIKNIDSFFEE 178
                    +RNI    M+   K  K+ +  +E++   ++  +    +         ++ 
Sbjct: 206 ERLNLCNEKLRNI--KAMNE--KLAKNHEGLTENLEHGIKEQLSVYLEHYKTKAMEVYKA 261

Query: 179 KKKEIMH 185
           K+KE++H
Sbjct: 262 KEKELLH 268


>gi|225558281|gb|EEH06565.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 302

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 11/187 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLN 53
           N       +++ +   +  LK D+  LR G R +P  ++ ++V     +  G+   V L 
Sbjct: 110 NDPFGFTQLENDIAVAVQRLKDDISKLRAGGRFNPEAIESLRVAVMKGDGKGTKETVKLG 169

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEER 110
           ++A V     RML + V D+  +  +   +  SNL LNP  +      L +P+P  T+E 
Sbjct: 170 ELAQVIPKAGRMLTILVGDQAYIKPITSALLSSNLSLNPQSDPHNSLQLNVPIPPPTKES 229

Query: 111 RLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
           R   VK A A  +K+  +VRN R      LK          D +      ++KI +   K
Sbjct: 230 RDQSVKDAKAAMDKASNAVRNARGAINKKLKNMGVKKLVRPDDLHKQIEKMEKIAEKGQK 289

Query: 171 NIDSFFE 177
            +   FE
Sbjct: 290 EVKEVFE 296


>gi|325973353|ref|YP_004250417.1| ribosome recycling factor [Mycoplasma suis str. Illinois]
 gi|323651955|gb|ADX98037.1| ribosome recycling factor [Mycoplasma suis str. Illinois]
          Length = 195

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 13/180 (7%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D ++IK RM + +             R++P+    ++VE  G+ V L+++A V + + R+
Sbjct: 24  DFEHIKKRMNEKLEEFTIS-------RLNPTHFYSLQVEYEGNLVSLSEIALVNLEKARL 76

Query: 66  LVVSVWDKE--MVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           L +  +     +   +E+ I ++   L   ++   LR  +PE T+E R   +K      E
Sbjct: 77  LTIKPYLPSQKITHDIEKAIKKAKPNLTINIKDNELRCSIPEPTQEIREEKIKSGKQIVE 136

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++KI++RN R+D    L+K  K+   SE+   S    + K     +  ++  + +K+KE+
Sbjct: 137 EAKIALRNKRKD----LQKYFKNSVQSENQKHSHREQLDKEISKYVLELEDNWAKKEKEL 192


>gi|61680523|pdb|1Y69|8 Chain 8, Rrf Domain I In Complex With The 50s Ribosomal Subunit
           From Deinococcus Radiodurans
          Length = 113

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/80 (41%), Positives = 52/80 (65%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           TEERR  L K+    AE+++++VRN+RRD  D +K   K  + SED     ++D+QK+TD
Sbjct: 34  TEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTD 93

Query: 167 STIKNIDSFFEEKKKEIMHF 186
           + IK I++   +K+ E+M F
Sbjct: 94  AAIKKIEAALADKEAELMQF 113


>gi|302678757|ref|XP_003029061.1| hypothetical protein SCHCODRAFT_59355 [Schizophyllum commune H4-8]
 gi|300102750|gb|EFI94158.1| hypothetical protein SCHCODRAFT_59355 [Schizophyllum commune H4-8]
          Length = 169

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 14/173 (8%)

Query: 14  MGDTISFLKKDMMTLR---TGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
           M   + + +KD  +     +GRV+P +L  V+V+  G    L +VA V V E   L+V++
Sbjct: 1   MKAAVEWFRKDCASAEARASGRVTPQLLSPVRVKIEGGEYRLEEVATVGVREGSTLLVTL 60

Query: 71  WDKEMVASVERGIHESNL-GLNPI-VEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           +D+  + +VE  ++ES L  + P   + + ++IP+P+ T E R  L   A   AE +++ 
Sbjct: 61  FDESTMKAVESALYESKLPNIVPQRQDVRTIKIPIPKPTVEARQRLHTEAQRKAEDTRVQ 120

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           +R   +     +KK +    + E        + QK+ D +I+ +D    + KK
Sbjct: 121 LR---KQMQTSVKKGKFEKHSVE------LEEYQKLLDRSIEEVDKTLAQMKK 164


>gi|126140376|ref|XP_001386710.1| hypothetical protein PICST_63916 [Scheffersomyces stipitis CBS
           6054]
 gi|126093994|gb|ABN68681.1| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 221

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 11/190 (5%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID ++   +    I    K     + G+ +P + D + V  +   +P   VA  +V   R
Sbjct: 34  IDFEDATVKFQSVIEKFNKAASEAKLGKTNPKIFDKLSVNTHDGELPFTSVAQTSVK-GR 92

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVAHAY 121
             +++++D E    V   I  S L +N  V+      L++P+P  T E +   VK     
Sbjct: 93  NFIITLFDPENSKHVINTILGSGLNMNAQVDPSNKFTLKVPLPPVTTETKNESVKHLKEI 152

Query: 122 AEKSKI------SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
            EK K       S+ +IR +  +   K  K  K S D    L    +K+       ++  
Sbjct: 153 FEKFKHGSAKNNSLSSIRSEVRNKFTKQLKGHK-STDAENKLLTQFEKLHKQYSDKLNES 211

Query: 176 FEEKKKEIMH 185
           F+  +  I+ 
Sbjct: 212 FKTAESSILK 221


>gi|325119994|emb|CBZ55547.1| putative ribosome recycling factor domain-containing protein
           [Neospora caninum Liverpool]
          Length = 380

 Score =  105 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 4/186 (2%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           +   ++ + ++ M   +  + +D+  L   R      + + V A G    L+ +A V V 
Sbjct: 195 SDAFNVASYEEEMKAALDKMVQDVSALLVHRERAEHFERIPVSAGGEKRRLSDLAQVVVR 254

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG-QVLRIPVPETTEERRLALVKVAHA 120
               + V V+ +  ++ V   +  ++       EG   +R+ +P+ T E R  L   A  
Sbjct: 255 GASTVHVHVFSEANLSKVMSALRAADPKWTLQQEGATAIRLQLPKVTPEMREELKTKARV 314

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEND--IQKITDSTIKNIDSFFEE 178
           +   +K SVRN+R+    HL K +     S D V   E D  +  + ++ +   D  F E
Sbjct: 315 FLVTAKSSVRNLRQAARSHLHKLQ-FKTRSIDDVKRRELDASLTSLMEAYVGKCDKVFNE 373

Query: 179 KKKEIM 184
           K ++++
Sbjct: 374 KMQQLL 379


>gi|255718059|ref|XP_002555310.1| KLTH0G06270p [Lachancea thermotolerans]
 gi|238936694|emb|CAR24873.1| KLTH0G06270p [Lachancea thermotolerans]
          Length = 239

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 18/195 (9%)

Query: 2   NQVIDLQ----NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVAN 57
            +V+D++      K +   T+   KK +  +R G  SPS+ D + V    S      VA 
Sbjct: 50  TEVVDVKQYVLKAKTQFSVTLDLHKKKLSEIRAGSASPSIFDKLSVGKENSK--FTDVAT 107

Query: 58  VTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPI---VEGQVLRIPVPETTEERRLAL 114
            ++     L+V+V+D +   SV   I  + L LNP       Q L+I +P  T E R   
Sbjct: 108 TSMKGKNSLIVTVFDPKDTKSVVSSILAAGLNLNPEKIPNNDQQLKISLPPPTTETRKQT 167

Query: 115 VKVAHAYAEKS-----KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTI 169
            K      E+      K S+ +IR D +  LK   K      D V  +  D+ K+     
Sbjct: 168 CKQLKEVFEEFKNSANKNSLGHIRGDILKQLKNIDKKN----DSVKKVIQDLDKLHKEYT 223

Query: 170 KNIDSFFEEKKKEIM 184
             +    ++ +K ++
Sbjct: 224 NTLQEQLKQAEKNVL 238


>gi|327304937|ref|XP_003237160.1| ribosome recycling factor [Trichophyton rubrum CBS 118892]
 gi|326460158|gb|EGD85611.1| ribosome recycling factor [Trichophyton rubrum CBS 118892]
          Length = 295

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 23/204 (11%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYG------------- 47
               D  ++ D + D +S LK+D+  LR G RV+P  ++ ++V  +              
Sbjct: 91  EDPFDFSSLNDSIKDAVSRLKEDLAKLRGGGRVTPEAIENLRVSLHKPGSVDVGKGKKGA 150

Query: 48  -----SHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VL 99
                  V L +VA+V     R + + V ++  V  V   I  S+L LNP  +      L
Sbjct: 151 SSSSKETVKLGEVASVIPKGGRSVSILVGEEHDVKHVMSAIISSDLSLNPQTDPHNLLQL 210

Query: 100 RIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN 159
            +P+P  T+E R   VK A    E++   VRN R   ++   K ++  K   D V    +
Sbjct: 211 NVPIPPPTKESREQTVKDAKIAMERASNIVRNGRA-ALNKKLKGKELKKLRPDDVRKAID 269

Query: 160 DIQKITDSTIKNIDSFFEEKKKEI 183
            ++KI++   K +   FE  KK +
Sbjct: 270 QMEKISEKGQKEVKDVFEAAKKAL 293


>gi|295659841|ref|XP_002790478.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226281655|gb|EEH37221.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 303

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 11/193 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLN 53
           +       + + + + +  LK D+  LR G R +P  ++ ++V     +  GS   V L 
Sbjct: 109 DDPYGFTQLDNDIAEAVRKLKDDISKLRAGGRFNPGTIESLRVAVTKGDGKGSKETVRLG 168

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEER 110
           ++A V     RML + V + E V  +   +  S+L LNP  +      L +P+P  T+E 
Sbjct: 169 ELAQVIPKGGRMLTLLVGEDEYVKPIASALLSSDLSLNPQRDAHNSLQLNVPIPPPTKES 228

Query: 111 RLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
           R   VK A A  E++  +VRN R      LK          D +      ++K+ +   K
Sbjct: 229 REQSVKDAKAAMERASNAVRNARGAINKKLKHMGVKKLVRPDDLHKQIEKMEKVAEKGQK 288

Query: 171 NIDSFFEEKKKEI 183
            +   FE  +K +
Sbjct: 289 EVKEVFEAARKAL 301


>gi|114690063|ref|XP_001138129.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 209

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 1/108 (0%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I   K +       R SP  LD + V      + LNQ+  ++V 
Sbjct: 80  EDIINLEEVNEEMKSVIEAHKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQIRQISVK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTE 108
            P++++V++    E   +  + I ES + LNP VEG ++R+P+P+ ++
Sbjct: 140 LPQLILVNMASFPECTVAAIKAIRESGMNLNPEVEGTLIRVPIPQISQ 187


>gi|325989788|ref|YP_004249487.1| ribosome-recycling factor [Mycoplasma suis KI3806]
 gi|323574873|emb|CBZ40533.1| Ribosome-recycling factor [Mycoplasma suis]
          Length = 195

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 13/180 (7%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRM 65
           D ++IK RM + +             R++P+    ++VE  G+ V L+++A V + + R+
Sbjct: 24  DFEHIKKRMNEKLEEFAIS-------RLNPTHFYSLQVEYEGNLVSLSEIALVNLEKARL 76

Query: 66  LVVSVWDKE--MVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           L +  +     +   +E+ I ++   L   ++   LR  +PE T+E R   +K      E
Sbjct: 77  LTIKPYLPSQKITHDIEKSIKKAKPNLTINIKDNELRCSIPEPTQEIREEKIKSGKQIVE 136

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++KI++RN R+D    L+K  K+   SE+   S    + K     +  ++  + +K+KE+
Sbjct: 137 EAKIALRNKRKD----LQKYFKNSVQSENQKHSHREQLDKEISKYVLELEDNWSKKEKEL 192


>gi|242218533|ref|XP_002475056.1| predicted protein [Postia placenta Mad-698-R]
 gi|220725781|gb|EED79754.1| predicted protein [Postia placenta Mad-698-R]
          Length = 258

 Score =  104 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 91/179 (50%), Gaps = 20/179 (11%)

Query: 9   NIKDRMGDTISFLKKDMMTLR---TGRVSPSMLDLVKVEAYGSH------VPLNQVANVT 59
             + +M   +   +K++ T+    +GRV+P++L  V+V    S       V L +VA V 
Sbjct: 79  KAEGKMKAIVERFRKEVATMEMRASGRVTPAILSPVRVMLPDSEGGDAKGVRLEEVATVG 138

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNL-GLNPI-VEGQVLRIPVPETTEERRLALVKV 117
           V E   L+V+V+++  +  VE  ++++ L G+ P  V+ + ++IP+P+ T + R A++  
Sbjct: 139 VREGTTLLVTVFEEHTLRHVETALYDAKLPGVVPQKVDARTIKIPMPKPTVDARQAMLAS 198

Query: 118 AHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
           A   AE S++ +R   +     LKK + +  + E       ++ Q +TD  +  +D   
Sbjct: 199 AQRQAEDSRVQIR---KQHQASLKKGKYAKHSPE------LDEFQSLTDKYLGEVDKVL 248


>gi|50287853|ref|XP_446356.1| hypothetical protein [Candida glabrata CBS 138]
 gi|60390409|sp|Q6FTT8|RRF1_CANGA RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|49525663|emb|CAG59280.1| unnamed protein product [Candida glabrata]
          Length = 233

 Score =  104 bits (260), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 15/191 (7%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N  I +  +  +   ++    K++   R G V+ ++ D + ++  G+     ++A+ T+ 
Sbjct: 48  NPSIYVDELVSKFDKSLELYSKELTDKRKGSVNANIFDNLSLK-NGAL--FKEMASTTLK 104

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPI---VEGQVLRIPVPETTEERRLALVKVA 118
               L+V+V+D   V ++   I  S   LNP       Q L+IP+P  T E R  L K  
Sbjct: 105 GKGSLLVTVFDPNEVKNIVSAILASGQNLNPERVPTNNQQLKIPLPPPTAESRQNLCKEL 164

Query: 119 HAYAEKSKI-----SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
               EK K      S+ +IR + M  LK  +K  +     V  +  +++K+    +  + 
Sbjct: 165 KTVFEKYKQSPSKNSLGHIRNEVMKKLKSLQKKDE----SVKKIIQNVEKVHKDYVTKLS 220

Query: 174 SFFEEKKKEIM 184
              ++ +K +M
Sbjct: 221 EQLKQAEKSVM 231


>gi|195167879|ref|XP_002024760.1| GL22438 [Drosophila persimilis]
 gi|194108165|gb|EDW30208.1| GL22438 [Drosophila persimilis]
          Length = 105

 Score =  103 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 81  RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           R I +S + LNP  +G  L IP+P+ ++  R  L K A A   K + ++RN++    DH+
Sbjct: 2   RAIAKSGMNLNPQQDGTTLFIPIPKVSKVHRENLSKNAKALFVKYRDAIRNVQ---NDHI 58

Query: 141 KKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +K +K     +D   + +  +  I D  I   D     K+KE++
Sbjct: 59  RKLKKQPDVGQDDAFAAQTQVTAIGDKFIAEADKLLASKQKELL 102


>gi|145253418|ref|XP_001398222.1| ribosome recycling factor [Aspergillus niger CBS 513.88]
 gi|134083787|emb|CAK47121.1| unnamed protein product [Aspergillus niger]
          Length = 273

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 7/180 (3%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGSH---VPLNQVANVTVL 61
           D   + D +   +S L+ ++  +R G R +   ++ ++V+   S    + L  +A V   
Sbjct: 86  DFSQLHDGIAAALSRLRDELSKMRVGGRFNTVSIESLRVQLSKSSKQSIKLGDLAQVVPK 145

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVA 118
             RM+ +   D++ V  +   I  SNL L P  +      L + +P  T+E R   + +A
Sbjct: 146 GGRMVTILASDEDHVKPIRSSIVSSNLSLTPQADPHNSLQLNVTIPPPTKESRDQTIAMA 205

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
            A  EK+  +VR+ R      L+  +K   A  D V   +  ++K+ +   K +   FE 
Sbjct: 206 KAAMEKAAGAVRDSRSAVHKRLQDLQKKKIARPDDVRKAQEQMEKLAEKGQKEVKELFET 265


>gi|240277236|gb|EER40745.1| ribosome recycling factor [Ajellomyces capsulatus H143]
 gi|325094056|gb|EGC47366.1| ribosome recycling factor [Ajellomyces capsulatus H88]
          Length = 302

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 11/187 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLN 53
           N       +++ +   +  LK D+  LR G R +   ++ ++V     +  G+   V L 
Sbjct: 110 NDPFGFTQLENDIAVAVQRLKDDISKLRAGGRFNLEAIESLRVAVMKGDGKGTKETVKLG 169

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEER 110
           ++A V     RML + V D+  +  +   +  SNL LNP  +      L +P+P  T+E 
Sbjct: 170 ELAQVIPKAGRMLTILVGDQAYIKPITSALLSSNLSLNPQSDPHNSLQLNVPIPPPTKES 229

Query: 111 RLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
           R   VK A A  +K+  +VRN R      LK          D +      ++KI +   K
Sbjct: 230 RDQSVKDAKAAMDKASNAVRNARGAINKKLKNMGVKKLVRPDDLHKQIEKMEKIAEKGQK 289

Query: 171 NIDSFFE 177
            +   FE
Sbjct: 290 EVKEVFE 296


>gi|70983348|ref|XP_747201.1| ribosome recycling factor [Aspergillus fumigatus Af293]
 gi|66844827|gb|EAL85163.1| ribosome recycling factor, putative [Aspergillus fumigatus Af293]
 gi|159123795|gb|EDP48914.1| ribosome recycling factor, putative [Aspergillus fumigatus A1163]
          Length = 268

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 7/189 (3%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEA-YGSH--VPLNQVAN 57
               DL ++++ +   ++ LK ++  LR G R +   L+ ++V    G    V L ++A 
Sbjct: 77  EDPYDLSSLENGIVAAVARLKDELSKLRMGGRFNTESLEDLRVSLGKGGKEIVRLGELAQ 136

Query: 58  VTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVL---RIPVPETTEERRLAL 114
           V     R + +   ++E V  +   I  S+L L P  +   +    I +P  T+E R   
Sbjct: 137 VVPKGGRTVTILASEEEHVKPITSAILSSDLSLTPQPDPHNILQLNISIPPPTKELREQT 196

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           V  A A  EK+  +VR  R      L+  +K   A  D V   ++ ++++T+   K +  
Sbjct: 197 VVAARAAMEKAAGAVRESRSVSHKRLQDMQKKKLARPDDVRKAQDHMERLTEKGQKEVKE 256

Query: 175 FFEEKKKEI 183
            F+  K+ +
Sbjct: 257 LFDAAKRAL 265


>gi|156844975|ref|XP_001645548.1| hypothetical protein Kpol_1004p67 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116212|gb|EDO17690.1| hypothetical protein Kpol_1004p67 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 238

 Score =  102 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 19/194 (9%)

Query: 3   QVIDLQ----NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANV 58
           ++ID++    +      +++    K +  ++ GR +P + D +K+    S      VA+ 
Sbjct: 51  EIIDVKGYIADATKLFDESLELHNKKLNEIKQGRANPKIFDGLKLHNGAS---FKDVAHT 107

Query: 59  TVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPI---VEGQVLRIPVPETTEERRLALV 115
           ++     L+++V+D +   +V   I  + L LNP       Q+L++ +P  T E R+ LV
Sbjct: 108 SLRGKNSLLITVYDPKDAKNVISAIMGAGLNLNPEKDPNNSQLLKVLLPPPTTESRMNLV 167

Query: 116 KVAHAYAEKSKIS-VRN----IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
           K      E  K S +RN    +R D +  +KK  K     +D V     D++K+     K
Sbjct: 168 KELKIVFESFKSSSMRNSLASVRADILKEMKKLDKK----DDSVRKAMQDLEKLHKDYAK 223

Query: 171 NIDSFFEEKKKEIM 184
            +    ++ +K +M
Sbjct: 224 KLQDQLKQAEKTLM 237


>gi|299143516|ref|ZP_07036596.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 386 str.
          F0131]
 gi|298518001|gb|EFI41740.1| ribosome recycling factor [Peptoniphilus sp. oral taxon 386 str.
          F0131]
          Length = 78

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 3/78 (3%)

Query: 9  NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
          + K+R+  +I+   K   ++R GR +PS+LD + V+ YG   PLNQVA ++  EPR+L +
Sbjct: 4  DCKERICKSITDRSK---SIRAGRANPSLLDKITVDYYGQATPLNQVAGISAPEPRLLAI 60

Query: 69 SVWDKEMVASVERGIHES 86
          + WD  ++ ++E+ I +S
Sbjct: 61 TPWDASLIPAIEKAILKS 78


>gi|164661787|ref|XP_001732016.1| hypothetical protein MGL_1284 [Malassezia globosa CBS 7966]
 gi|159105917|gb|EDP44802.1| hypothetical protein MGL_1284 [Malassezia globosa CBS 7966]
          Length = 262

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 8/181 (4%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTL--RTGRVSPSMLDLVKVEAYGS--HVPLNQVANVTV 60
           +DL      M   ++   + + TL    GRV  ++LD V+V        +PL+  A V V
Sbjct: 76  LDLNGTSSEMESVVARCSEHVRTLVGSLGRVDAALLDDVRVSTGKGIKPIPLHNFATVGV 135

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIV---EGQVLRIPVPETTEERRLALVKV 117
            +  +LV++ ++ E +  +E+ I+     L P +   E  V+ + VP+ T E R  L++ 
Sbjct: 136 RD-NVLVITAYEPETLKHIEKAIYAVGKDLAPQIMHDEEGVMIVHVPKPTGETRKILLQK 194

Query: 118 AHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFE 177
                + +K  +RN+R+    H+K    +   S++        +++IT      ++    
Sbjct: 195 CIKECDHAKTMLRNVRQSAQKHMKHDSDNKILSKNEAQKESKKLEEITKKHTALLEQVAA 254

Query: 178 E 178
           E
Sbjct: 255 E 255


>gi|119484074|ref|XP_001261940.1| ribosome recycling factor, putative [Neosartorya fischeri NRRL 181]
 gi|119410096|gb|EAW20043.1| ribosome recycling factor, putative [Neosartorya fischeri NRRL 181]
          Length = 244

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 7/189 (3%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGS---HVPLNQVAN 57
               DL ++++ +   ++ LK ++  LR G R +   L+ ++V         V L ++A 
Sbjct: 53  EDPYDLSSLENGIVAAVARLKDELSKLRMGGRFNTESLEDLRVSLSKGGKETVRLGELAQ 112

Query: 58  VTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVL---RIPVPETTEERRLAL 114
           V     RM+ +   ++E +  +   I  S+L L P  +   +    I +P  T+E R   
Sbjct: 113 VVPKGGRMVTILASEEEHMKPITSAILSSDLSLTPQPDPHNILQLNISIPPPTKELREQT 172

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           V  A A  EK+  +VR  R      L+  +K   A  D V   +  ++++T+   K +  
Sbjct: 173 VVAARAAMEKAAGAVRESRSVSHKRLQDMQKKKLARPDDVRKAQEHMERLTEKGQKEVKE 232

Query: 175 FFEEKKKEI 183
            F+  K+ +
Sbjct: 233 LFDAAKRAL 241


>gi|296421645|ref|XP_002840375.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636590|emb|CAZ84566.1| unnamed protein product [Tuber melanosporum]
          Length = 258

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 83/182 (45%), Gaps = 11/182 (6%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAY---GSHVPLNQVANVTVLE 62
            ++++ +    I  L+ D+  LR G R  P+ L+ ++V      G+   L  +A+V + +
Sbjct: 76  FESLEAQCSAHIDKLRTDIAKLRAGGRNDPATLENIQVVLDRSTGASASLRDIAHV-LPK 134

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG---QVLRIPVPETTEERRLALVKVAH 119
            R  VVSV+D   V  V   I +++L + P+ +    Q++ +P+P  T+E R  + ++  
Sbjct: 135 GRSFVVSVYDAANVKYVIAAIQKADLNVQPMPDPKNTQLINVPLPPPTKETRSEIARMVG 194

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEK 179
              E+    +R  R+D    +K  +K      D +   +  ++ +            ++ 
Sbjct: 195 KAGERVMNYLRLARQDSHKLIKGLKKE---RPDDIRKADKQLELVMKKINAEAKKVIDDG 251

Query: 180 KK 181
           KK
Sbjct: 252 KK 253


>gi|58263076|ref|XP_568948.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134107878|ref|XP_777321.1| hypothetical protein CNBB1230 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260011|gb|EAL22674.1| hypothetical protein CNBB1230 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223598|gb|AAW41641.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
          Length = 252

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 20/184 (10%)

Query: 7   LQNIKDRMGDTISFLK----KDMMTLRTGRVSPSMLDLVKVEAYGSH--VPLNQVANVTV 60
           +   K +M  ++ + K    + +   R GRVSP++LD V+V    +   + LN +A+VT 
Sbjct: 77  VSKAKAKMEKSVHWAKAVLFEGVERGR-GRVSPALLDSVRVSLPDTPGTLHLNALASVTT 135

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNL-GLNPIVE-GQVLRIPVPETTEERRLALVKVA 118
                L V VWD   +  VE  IH +NL G++P    G  L+IP+   T E+R  +++  
Sbjct: 136 K-GNALFVEVWDTASLKQVESAIHAANLPGISPQRMAGTTLKIPIARPTVEQRAEILRQL 194

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E +K  +R  R DG   L   + +G           +++QK+ D   K++D     
Sbjct: 195 AETVEAAKTQIRVARTDGFKALGGRKANGT----------DEVQKVVDEMCKDLDGQLAL 244

Query: 179 KKKE 182
            KKE
Sbjct: 245 AKKE 248


>gi|259486711|tpe|CBF84788.1| TPA: ribosome recycling factor, putative (AFU_orthologue;
           AFUA_8G03940) [Aspergillus nidulans FGSC A4]
          Length = 255

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 7/187 (3%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE-AYGSH--VPLNQVAN 57
           +   DL  ++  +   +S LK ++  LRTG R+ P  ++ ++V+ + G+     L  +A 
Sbjct: 64  DDPSDLSQLELGIATAVSRLKDELTKLRTGGRLCPETIESLRVQLSKGTKETARLGDLAQ 123

Query: 58  VTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLAL 114
           V     RM+ V V ++  +  +   I  SNL L P  +      L IP+P  T+E R   
Sbjct: 124 VVPKGGRMVAVLVSEESYMKPISSAILASNLSLTPQQDPHNALQLNIPIPPPTKESRDQT 183

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           V  A A  E++  +VR  R      L++  K   A  D     ++ ++K+T+   K +  
Sbjct: 184 VLAAKAAMERAASNVRETRGIVHKRLQEMIKKKIARPDDARKAQDKMEKLTEKGQKEVKD 243

Query: 175 FFEEKKK 181
            FE  KK
Sbjct: 244 LFEVAKK 250


>gi|315302963|ref|ZP_07873687.1| ribosome-recycling factor [Listeria ivanovii FSL F6-596]
 gi|313628668|gb|EFR97077.1| ribosome-recycling factor [Listeria ivanovii FSL F6-596]
          Length = 77

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 45/72 (62%)

Query: 7  LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
          L   K++M      L +   T+R GR + S+LD + V+ YG+  P+NQ+A+++V E RML
Sbjct: 6  LSKSKEKMEKAEQALTRQFGTIRAGRANASLLDRLTVDYYGAPTPVNQMASISVPEARML 65

Query: 67 VVSVWDKEMVAS 78
          +++ +DK ++  
Sbjct: 66 LITPYDKTILGE 77


>gi|307069549|ref|YP_003878026.1| putative ribosome recycling factor [Candidatus Zinderia insecticola
           CARI]
 gi|306482809|gb|ADM89680.1| putative ribosome recycling factor [Candidatus Zinderia insecticola
           CARI]
          Length = 180

 Score =  101 bits (252), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 93/165 (56%), Gaps = 4/165 (2%)

Query: 21  LKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE 80
            K +++ ++  +++ ++L  +K++     + LN+++N+ V++ + L +  ++K ++ +++
Sbjct: 19  FKNNLIKIQGNKLNSNILYNIKIKYNNKKIYLNKISNIFVIDEKTLSIIPYEKNIINNIK 78

Query: 81  RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           + ++ +    N I +     I +P+   E +  ++     Y E+ KI++RN RR   + +
Sbjct: 79  KTLNYNKFNFNYIKKKNTFYIKIPKLNNEFKNIIINNLKKYTEEKKINIRNERRIFKNKI 138

Query: 141 KKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
            K +     S + + +++N + K+T   I+ ID FF+ KKKEI++
Sbjct: 139 NKEK----YSLNEINNIKNKLDKLTKKYIEKIDFFFKIKKKEILN 179


>gi|226291233|gb|EEH46661.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 303

 Score =  100 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 11/193 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLN 53
           +       + + + + +  LK D+  LR G RV+P  ++ ++V     +  GS   V L 
Sbjct: 109 DDPFGFTQLDNDIAEAVRKLKDDISKLRAGGRVNPETIESLRVAVTKGDGKGSKETVRLG 168

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEER 110
           ++  V     RML + V + E V  +   +  SNL LNP  +      L +P+P  T+E 
Sbjct: 169 ELVQVIPKGGRMLTLLVGEDEYVKPITSALLSSNLSLNPQTDAHNSLQLNVPIPPPTKES 228

Query: 111 RLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
           R   VK A A  E++  +VRN R      LK          D +      ++K+ +   K
Sbjct: 229 REQSVKDAKAAMERASNAVRNARGAINKKLKHMGVKKLVRPDDLHKQIEKMEKVAEKGQK 288

Query: 171 NIDSFFEEKKKEI 183
            +   FE  +K +
Sbjct: 289 EVKDVFEAARKAL 301


>gi|307128651|ref|YP_003880681.1| ribosome recycling factor [Candidatus Sulcia muelleri CARI]
 gi|306483113|gb|ADM89983.1| ribosome recycling factor [Candidatus Sulcia muelleri CARI]
          Length = 157

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 83/153 (54%), Gaps = 4/153 (2%)

Query: 1   MNQVIDL-QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVT 59
           M +  DL +  K  + D     KK ++ +R  R++ + LD + +E YG+ VP+N+++ + 
Sbjct: 1   MKESFDLIKKFKLEVKDKKEKFKKQILKIRIDRINENFLDSINIEYYGNKVPINKISTIL 60

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
            +    +++  W+K+ +  + + + + + GL  I +G+++++ + + TEE R  L+K   
Sbjct: 61  KVNSITVLIKPWEKKYLNIIYKTLLKEDRGLIIINDGKMIKLKISKLTEETRKKLIKKVK 120

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASED 152
            + EK KI +RNIR +     KK  K     ED
Sbjct: 121 FFLEKKKIEIRNIRNEVN---KKLTKFSSLEED 150


>gi|320584172|gb|EFW98383.1| Mitochondrial ribosome recycling factor [Pichia angusta DL-1]
          Length = 223

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 8/186 (4%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +N    L+++  +    +   KK +  ++ G+  P + + +KV      VP   +A  T+
Sbjct: 42  INPSAILKDVDTQFQSVLDKYKKKITEIKLGKADPQIFNKLKVRVENGTVPFTDIAQTTL 101

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVE---GQVLRIPVPETTEERRLALVKV 117
              + L ++V+D +    +   I  +NL LN   +    Q+LR+ +P TT++ +    K 
Sbjct: 102 K-GKFLTITVFDPKNSKRIISAILGTNLNLNAEEDPKNPQLLRVALPSTTKDLKEKQAKE 160

Query: 118 AHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFE 177
                   K S  +IR   +  LKK R     S D +  L NDI+K   +  + + + ++
Sbjct: 161 LKENFNIFKASSASIRAQVLKDLKKVR----GSADTLRKLLNDIEKTHKNYTEKLTNAYK 216

Query: 178 EKKKEI 183
           E +K +
Sbjct: 217 EAEKSL 222


>gi|225679501|gb|EEH17785.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 303

 Score = 99.3 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 11/193 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLN 53
           +       + + + + +  LK D+  LR G RV+P  ++ ++V     +  GS   V L 
Sbjct: 109 DDPYGFTQLDNDIAEAVRKLKDDISKLRAGGRVNPETIESLRVAVTKGDGKGSKETVRLG 168

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEER 110
           ++  V     RML + V + E V  +   +  SNL LNP  +      L +P+P  T+E 
Sbjct: 169 ELVQVIPKGGRMLTLLVGEDEYVKPITSALLSSNLSLNPQTDAHNSLQLNVPIPPPTKES 228

Query: 111 RLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
           R   VK A A  E++  +VRN R      LK          D +      ++K+ +   K
Sbjct: 229 REQSVKEAKAAMERASNAVRNARGAINKKLKHMGVKKLVRPDDLHKQIEKMEKVAEKGQK 288

Query: 171 NIDSFFEEKKKEI 183
            +   FE  +K +
Sbjct: 289 EVKDVFEAARKAL 301


>gi|291237422|ref|XP_002738637.1| PREDICTED: mitochondrial ribosome recycling factor-like
           [Saccoglossus kowalevskii]
          Length = 97

 Score = 98.2 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 2/97 (2%)

Query: 88  LGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSG 147
           + LNP  EG ++++P+P+ T E R  L K A    +K+K++VRN+R   M+ +K+ +   
Sbjct: 1   MNLNPQSEGTMIQVPIPKVTREHREHLSKTAKTMCDKAKVNVRNVRSKVMNDIKQHK--D 58

Query: 148 KASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
            AS+D++  LE  +Q++TD    + +     K KE++
Sbjct: 59  HASKDVLKMLEKQVQQLTDDFNASAEQLLVAKNKELL 95


>gi|332027531|gb|EGI67608.1| Ribosome-recycling factor, mitochondrial [Acromyrmex echinatior]
          Length = 146

 Score = 97.4 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 77/145 (53%), Gaps = 5/145 (3%)

Query: 41  VKVEAYGSHVPLNQVANVTVLEPRMLVVSVW-DKEMVASVERGIHESNLGLNPIVEGQVL 99
           + V+  G    L ++A ++   P+++V++V    + +  + + + ++ + LNP  +G  +
Sbjct: 2   LSVKFDGKDFTLQELAKISRK-PKLIVLNVSTFPQAIPDILKSLTKNQMKLNPQQDGTTI 60

Query: 100 RIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN 159
            +P+P+ T+E+R  L K A ++  K   +VR +R      +K  ++  K ++D+V  +E+
Sbjct: 61  YVPIPKVTKEQREILSKNAKSFYVKCCDNVRQVR---NKQIKAVKQKEKLAKDLVFRIES 117

Query: 160 DIQKITDSTIKNIDSFFEEKKKEIM 184
            I  ++       +   E K+KE++
Sbjct: 118 YIDILSHQYTNKAEQMLETKQKELL 142


>gi|261201714|ref|XP_002628071.1| ribosome recycling factor [Ajellomyces dermatitidis SLH14081]
 gi|239590168|gb|EEQ72749.1| ribosome recycling factor [Ajellomyces dermatitidis SLH14081]
          Length = 277

 Score = 97.4 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 32/190 (16%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLN 53
           +       +++ +   +  LK D+  LR G R +P  ++ ++V     +  GS   V L 
Sbjct: 110 DDPFGFSQLENDIAGAVQRLKDDISKLRAGGRFNPEAIETLRVAVSKGDGKGSKETVKLG 169

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLA 113
           ++A V     RML + V ++E                        L +P+P  T+E R  
Sbjct: 170 ELAQVIPKGGRMLTILVGEEE------------------------LNVPIPPPTKESRDQ 205

Query: 114 LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
            VK A A  +K+  +VRN R      LK          D +      ++KI +   K + 
Sbjct: 206 SVKDAKAAMDKASTAVRNARGAINKKLKNMGVKKLVRPDDLHKQVEKMEKIAEKGQKEVK 265

Query: 174 SFFEEKKKEI 183
             FE  KK +
Sbjct: 266 DVFEAAKKAL 275


>gi|321248742|ref|XP_003191225.1| hypothetical protein CGB_A1450C [Cryptococcus gattii WM276]
 gi|317457692|gb|ADV19438.1| Hypothetical Protein CGB_A1450C [Cryptococcus gattii WM276]
          Length = 252

 Score = 97.4 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%)

Query: 7   LQNIKDRMGDTISFLK----KDMMTLRTGRVSPSMLDLVKVEAYGSH--VPLNQVANVTV 60
           +   + +M  ++ + K    + +   R GRVSP++LD V+V    +   + LN +A+VT 
Sbjct: 77  VSKARAKMEKSVHWAKAVLFEGVERGR-GRVSPALLDSVRVTLPDTPGTLHLNALASVTT 135

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNL-GLNPIVEG-QVLRIPVPETTEERRLALVKVA 118
                L V VWD   +  VE  IH +NL G++P       L+IP+   T E+R  +++  
Sbjct: 136 K-GNALFVEVWDTASLKQVESAIHSANLPGISPQRMAATTLKIPIARPTVEQRTEILRQL 194

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
               E +K  +R  R DG   L   + +G           +++QK+ D   K++D     
Sbjct: 195 AETVEAAKTQIRVARTDGFKALGGRKANGT----------DEVQKVVDEMCKDLDGQLAL 244

Query: 179 KKKE 182
            KKE
Sbjct: 245 AKKE 248


>gi|239611883|gb|EEQ88870.1| ribosome recycling factor [Ajellomyces dermatitidis ER-3]
          Length = 277

 Score = 97.0 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 32/190 (16%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKV-----EAYGSH--VPLN 53
           +       +++ +   +  LK D+  LR G R +P  ++ ++V     +  GS   V L 
Sbjct: 110 DDPFGFSQLENDIAGAVQRLKDDISKLRAGGRFNPEAIETLRVAVSKGDGKGSKETVKLG 169

Query: 54  QVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLA 113
           ++A V     RML + V ++E                        L +P+P  T+E R  
Sbjct: 170 ELAQVIPKGGRMLTILVGEEE------------------------LNVPIPPPTKESRDQ 205

Query: 114 LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
            VK A A  +K+  +VRN R      LK          D +      ++KI +   K + 
Sbjct: 206 SVKDAKAAMDKASTAVRNARGAINKKLKNMGVKKLVRPDDLHKQVEKMEKIAEKGQKEVK 265

Query: 174 SFFEEKKKEI 183
             FE  KK +
Sbjct: 266 DVFEAAKKAL 275


>gi|260944354|ref|XP_002616475.1| hypothetical protein CLUG_03716 [Clavispora lusitaniae ATCC 42720]
 gi|238850124|gb|EEQ39588.1| hypothetical protein CLUG_03716 [Clavispora lusitaniae ATCC 42720]
          Length = 246

 Score = 96.6 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 79/194 (40%), Gaps = 18/194 (9%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           ID+  +  R+   I    K     + G+ +P + D ++VE          VA  T L+ R
Sbjct: 58  IDMDEVTKRLQSVIDKFAKHANEAKLGKTNPQIFDHLQVETADGEAVFTSVAQ-TALKGR 116

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNPIVE---GQVLRIPVPETTEERRLALVKVAHAY 121
             +++V+D      V   +  S+L +NPI +    Q+L++P+P  T E +   VK     
Sbjct: 117 NFIITVFDPANTKHVVNAVLASDLNMNPIADPSNKQMLKVPLPPVTTESKKENVKHLKTI 176

Query: 122 AEKSKIS----------VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
            EK +            +  IR D    + K +K      D    +  + +K+  S  + 
Sbjct: 177 YEKYRNGPGGSGKHASTLAAIRADVKSKVAKKKKLT----DAETKVWTEYEKLHKSFTEK 232

Query: 172 IDSFFEEKKKEIMH 185
           +   F+  +  +M 
Sbjct: 233 LGEVFKTAEAAMMK 246


>gi|237831449|ref|XP_002365022.1| hypothetical protein TGME49_057980 [Toxoplasma gondii ME49]
 gi|211962686|gb|EEA97881.1| hypothetical protein TGME49_057980 [Toxoplasma gondii ME49]
 gi|221487127|gb|EEE25373.1| ribosome recycling factor, putative [Toxoplasma gondii GT1]
 gi|221506812|gb|EEE32429.1| ribosome recycling factor, putative [Toxoplasma gondii VEG]
          Length = 290

 Score = 95.5 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 21/198 (10%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGS----------HVPLNQVA 56
           L    + +      +K+ +  LR    S   L+ + +   G+           V +  + 
Sbjct: 90  LNRTNESLQAATERVKQRLAHLRPEAASVLALEKIFLRVPGAASSGSADAQAPVSVRSIV 149

Query: 57  NVTVLEPRMLVVSVWDKE--MVASVERGIHESNLGL-----NPIVEGQV----LRIPVPE 105
            V  + P  L +        ++A++E+ +  ++LGL     N   +G      L +  P 
Sbjct: 150 TVKQVSPSTLALQPTTSSFQLLAAIEKALSTASLGLSVRTRNADEKGTKRQMELLVDFPP 209

Query: 106 TTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKIT 165
            T+ERRL LV  A A AE+ ++ +R +RRD ++ L+  +K+G   ED ++ L++ +Q++T
Sbjct: 210 LTQERRLQLVSEAKAEAEEGRVVLRRLRRDLVEELRGVKKAGGIGEDRISKLQDRVQQVT 269

Query: 166 DSTIKNIDSFFEEKKKEI 183
           +  I  IDS    K+K++
Sbjct: 270 EKKIAEIDSALASKEKQL 287


>gi|227547148|ref|ZP_03977197.1| possible protein-synthesizing GTPase [Bifidobacterium longum
          subsp. infantis ATCC 55813]
 gi|227212367|gb|EEI80263.1| possible protein-synthesizing GTPase [Bifidobacterium longum
          subsp. infantis ATCC 55813]
          Length = 68

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 39/62 (62%)

Query: 8  QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
          ++ + RM   +   K  +  +RTGR SPS+LD + VE YG+  PL Q+A+VTV + R L 
Sbjct: 7  KDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLK 66

Query: 68 VS 69
          ++
Sbjct: 67 IN 68


>gi|241958478|ref|XP_002421958.1| ribosomal recycling factor, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
 gi|223645303|emb|CAX39959.1| ribosomal recycling factor, mitochondrial precursor, putative
           [Candida dubliniensis CD36]
          Length = 307

 Score = 95.1 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 81/193 (41%), Gaps = 14/193 (7%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEA--YGSH--VPLNQVANVTV 60
           ID Q +     + ++   K    ++ G+++P + D ++V    +G    VP   VA  +V
Sbjct: 117 IDFQKVTSNFDNVLAKFNKAATDIKLGKLNPKIFDNLEVNIGNHGQEELVPFTSVAQTSV 176

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKV 117
              R  +++++D      V   I  S L ++  ++      +++P+P  T E +   +K 
Sbjct: 177 K-GRNFIINLFDASYGKHVINSIIGSGLNMSGTIDPTNKFQIKVPIPNITAETKQENIKQ 235

Query: 118 AHAYAEKSKI-----SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
                E  K      S+  +R +  +  +   K  K S D    L   ++ +  + +  +
Sbjct: 236 LKEIFENLKNNHKSSSLNYVRSEARNKFQSGLKHNKIS-DNQHQLLKKLETLHKTYVDKL 294

Query: 173 DSFFEEKKKEIMH 185
              F++ +K I+ 
Sbjct: 295 TDAFKQAEKSILK 307


>gi|312978248|ref|ZP_07789992.1| ribosome recycling factor [Lactobacillus crispatus CTV-05]
 gi|310894966|gb|EFQ44036.1| ribosome recycling factor [Lactobacillus crispatus CTV-05]
          Length = 82

 Score = 94.7 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/79 (46%), Positives = 52/79 (65%)

Query: 105 ETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
           + T ERR  + K    +AE++KI+VRN+RRD M+ LKK  K+G  +ED   +LE  +QK+
Sbjct: 1   QLTGERREEIAKEVGKFAEEAKIAVRNVRRDAMNTLKKDEKNGDITEDEQRNLEKQVQKV 60

Query: 165 TDSTIKNIDSFFEEKKKEI 183
           TD   K ID   +EK+KEI
Sbjct: 61  TDDAAKQIDQLADEKRKEI 79


>gi|194247969|dbj|BAG55427.1| hypothetical protein [chlorophyte sp. MBIC11204]
          Length = 158

 Score = 94.7 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/80 (36%), Positives = 48/80 (60%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
             IDL   +  M  +I  L+  + +LR GR SP MLD +KV+ YG  + L  + +V+V +
Sbjct: 79  DAIDLGETQRAMESSIERLQGILGSLRAGRASPGMLDTLKVDVYGERMSLKSIGSVSVRD 138

Query: 63  PRMLVVSVWDKEMVASVERG 82
            +MLVVS +D + + ++E+ 
Sbjct: 139 QQMLVVSAFDPQTLPNIEKA 158


>gi|207109446|ref|ZP_03243608.1| ribosome recycling factor [Helicobacter pylori HPKX_438_CA4C1]
          Length = 86

 Score = 94.7 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 26/66 (39%), Positives = 42/66 (63%)

Query: 46  YGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPE 105
           YG+   LNQV +V  L+   L +S W+K M+  +ER I E+N+G+NP  +G+ +++  P 
Sbjct: 1   YGTPTALNQVGSVMSLDATTLQISPWEKNMLKEIERSIQEANIGVNPNNDGETIKLFFPP 60

Query: 106 TTEERR 111
            T E+R
Sbjct: 61  MTTEQR 66


>gi|149239126|ref|XP_001525439.1| hypothetical protein LELG_03367 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450932|gb|EDK45188.1| hypothetical protein LELG_03367 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 271

 Score = 94.7 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 80/191 (41%), Gaps = 13/191 (6%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGS----HVPLNQVANVTV 60
           ID ++ ++R    +   +K    ++ GR++P + D + V          VP   VA  ++
Sbjct: 80  IDFKDAEERFQHVLEKFEKAANEIKLGRLNPRVFDNLMVAVKDGNKSEEVPFTSVALTSM 139

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKV 117
              R  +V+++D    A++   I  S L ++   +      LRIP+P  T+E +   +K 
Sbjct: 140 K-GRNFIVTMFDPLQSAAIINAIIGSGLNMSGTTDPNNKFNLRIPMPPVTQETKQNDLKQ 198

Query: 118 AHAYAEKSKISVR----NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
                EK+K   R     +R +       S K+ K S+     L   ++K+       + 
Sbjct: 199 LKELYEKTKNGARGSLTGVRGEVRQKFHGSLKTHKLSDSENKQLL-QLEKLYKLFADKLQ 257

Query: 174 SFFEEKKKEIM 184
               + +K IM
Sbjct: 258 DVHRKFEKSIM 268


>gi|68476905|ref|XP_717430.1| potential mitochondrial ribosome recycling factor [Candida albicans
           SC5314]
 gi|68477094|ref|XP_717340.1| potential mitochondrial ribosome recycling factor [Candida albicans
           SC5314]
 gi|46439049|gb|EAK98371.1| potential mitochondrial ribosome recycling factor [Candida albicans
           SC5314]
 gi|46439143|gb|EAK98464.1| potential mitochondrial ribosome recycling factor [Candida albicans
           SC5314]
 gi|238879856|gb|EEQ43494.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 261

 Score = 94.3 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 81/193 (41%), Gaps = 14/193 (7%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEA----YGSHVPLNQVANVTV 60
           ID Q +     + +S   K    ++ G+++P + D ++V      +   VP   VA  +V
Sbjct: 71  IDFQKVTSNFDNVLSKFNKAATDIKLGKLNPKIFDNLEVNIGNHGHEELVPFTSVAQTSV 130

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKV 117
              R  +++++D      V   I  S L ++  ++      +++P+P  T E +   +K 
Sbjct: 131 K-GRNFIINLFDAGYGKHVINSIIGSGLNMSGTIDPTNKFQIKVPIPNITTETKQENIKQ 189

Query: 118 AHAYAEKSK-----ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
                E  K      S+  +R +  +  + S K  K S D    L   ++ +  + +  +
Sbjct: 190 LKEIFENLKNNHKSNSLNYVRSEARNKFQSSLKHNKIS-DSQHQLLKKLETLHKTYVDKL 248

Query: 173 DSFFEEKKKEIMH 185
              F++ +K I+ 
Sbjct: 249 TDAFKQAEKSILK 261


>gi|300121780|emb|CBK22354.2| unnamed protein product [Blastocystis hominis]
          Length = 142

 Score = 92.8 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 7/147 (4%)

Query: 37  MLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG 96
           M+  +KVE  G    ++ +A V        +        ++ V + +  S+L LNP ++ 
Sbjct: 1   MIGQLKVELDGKSAVMSSIAQVAANTQISYL-------NLSFVVKTLKSSDLNLNPQIDK 53

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
             +RI +P+TT+E R  ++K      E+ K  +R +R+  MD ++   K+   S+D ++S
Sbjct: 54  NSVRIQIPKTTKETRQKMIKQVALECEQQKSKLRAVRKRYMDKVRVIEKNVSISKDDISS 113

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEI 183
           ++  I +ITD   K +    + K+KE+
Sbjct: 114 MKKKIDEITDRVSKEMAEMMKRKEKEL 140


>gi|254586291|ref|XP_002498713.1| ZYRO0G16830p [Zygosaccharomyces rouxii]
 gi|238941607|emb|CAR29780.1| ZYRO0G16830p [Zygosaccharomyces rouxii]
          Length = 243

 Score = 92.8 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 81/187 (43%), Gaps = 15/187 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++  ++   +T+   KK +   + G  +P + D +K++  GS    ++ A+ +      L
Sbjct: 63  IKKAQNSFENTLELHKKKLNEFKQGVANPRIFDELKLQ-NGSK--FSEAASTSTKGKNAL 119

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPI---VEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           +V+V+D +    V   I  + L LNP       Q L+I +P  T E R  + K      E
Sbjct: 120 LVTVYDPKDTKHVISTIMAAGLNLNPERVPNNDQQLKISLPPMTTETRTRMCKDLKKVFE 179

Query: 124 K-----SKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           +     SK S+ ++R +    + K  K      D V     D++K+    +  +     +
Sbjct: 180 EYKNSSSKDSLGHVRGE----ILKDLKKLAKKNDSVRKAVQDVEKVHKDYVNKMQQQLAQ 235

Query: 179 KKKEIMH 185
            +K +M+
Sbjct: 236 AEKNVMN 242


>gi|325117497|emb|CBZ53049.1| conserved hypothetical protein [Neospora caninum Liverpool]
          Length = 344

 Score = 92.8 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 92/198 (46%), Gaps = 21/198 (10%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSH----------VPLNQVA 56
           L    + +    + +K  +  LR    S   L+ + +    +           V +  V 
Sbjct: 144 LDKTNESLQGATNRVKHRLAQLRPEAASVLALEKIFLRLPAAPPTRPSDGLAPVSVRSVV 203

Query: 57  NVTVLEPRMLVVSVWDKEM--VASVERGIHESNLGLNPIVEGQ---------VLRIPVPE 105
            V  + P  L +   +  +   A++E+ +  ++LGL+   + +          + +  P 
Sbjct: 204 TVKQVSPSTLALQPLESSLQLFAAIEKALSTASLGLSVRTKNEDEKGAKRQREMLVDFPA 263

Query: 106 TTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKIT 165
            T+ERRL LV  A A AE+ ++ +R +RR+ ++ L+  +K+G   ED ++ L++ +Q+ T
Sbjct: 264 LTQERRLQLVNEARAEAEEGRVVLRRLRRELLEELRGVKKAGGIGEDRISKLQDRVQQAT 323

Query: 166 DSTIKNIDSFFEEKKKEI 183
           +  I  ID+    K+K++
Sbjct: 324 EKKIAEIDTTLSSKEKQL 341


>gi|296806365|ref|XP_002843992.1| ribosomal recycling factor [Arthroderma otae CBS 113480]
 gi|238845294|gb|EEQ34956.1| ribosomal recycling factor [Arthroderma otae CBS 113480]
          Length = 250

 Score = 92.0 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 21/151 (13%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAY-------------- 46
               D   + D + D ++ LK+D+  LR G RV+P  ++ ++V  +              
Sbjct: 95  EDPFDFAPLHDSIKDAVTRLKEDLAKLRGGGRVTPEAIENIRVSLHKVGGSDGGKGKKAA 154

Query: 47  --GSHV-PLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLR 100
             G     L +VA+V     R + + V ++  V +V   I  S+L LNP  +      L 
Sbjct: 155 SSGKETVRLGEVASVIPKGGRTVSILVGEEHDVKAVMSAITASDLSLNPQGDPHNPLQLN 214

Query: 101 IPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           + +P  T+E R   VK A A  EK+  + R 
Sbjct: 215 VAIPPPTKESREQTVKDAKAAMEKASNATRR 245


>gi|67925885|ref|ZP_00519171.1| ribosome releasing factor [Crocosphaera watsonii WH 8501]
 gi|67852264|gb|EAM47737.1| ribosome releasing factor [Crocosphaera watsonii WH 8501]
          Length = 56

 Score = 91.6 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 37/55 (67%)

Query: 7  LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
          L ++KD M  ++   ++   T+RTGR +P++LD V V+ YG+  PLNQ+AN++  
Sbjct: 2  LDDLKDNMQKSVEATQRSFNTIRTGRANPAILDRVTVDYYGTETPLNQLANISTP 56


>gi|221481837|gb|EEE20207.1| hypothetical protein TGGT1_098720 [Toxoplasma gondii GT1]
          Length = 270

 Score = 91.2 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 73/193 (37%), Gaps = 17/193 (8%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           +V  +   +  M   I  + +D+  L   R      + + V A G    L+ +A V V  
Sbjct: 72  EVFSVAAYEADMKAAIDKMVQDISALLVHRERAEHFERIPVSAGGEKRRLSDLAQVVVRG 131

Query: 63  PRMLVVSVWDK-------------EMVASVERGIHESNLGLNPIVEGQV-LRIPVPETTE 108
              + V V+                    V   +  ++       EG   +R+ +P+ T 
Sbjct: 132 ASTVHVHVFSVFFSALSLMSFFFLNSFCQVMSALRAADSKWTLQQEGNTAVRLQLPKVTS 191

Query: 109 ERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEND--IQKITD 166
           E R  L   A  +   +K +VRN+R+ G  HL K +     S D V   E D  +  + +
Sbjct: 192 EMREELKTKARVFLVTAKSAVRNMRQAGRSHLHKLQ-FKSRSIDDVKRRELDASLTTLME 250

Query: 167 STIKNIDSFFEEK 179
           + +   D  F EK
Sbjct: 251 TYVAKCDKVFNEK 263


>gi|237843331|ref|XP_002370963.1| ribosome recycling factor domain-containing protein [Toxoplasma
           gondii ME49]
 gi|211968627|gb|EEB03823.1| ribosome recycling factor domain-containing protein [Toxoplasma
           gondii ME49]
 gi|221502335|gb|EEE28068.1| ribosome recycling factor, putative [Toxoplasma gondii VEG]
          Length = 266

 Score = 91.2 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 73/193 (37%), Gaps = 17/193 (8%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLE 62
           +V  +   +  M   I  + +D+  L   R      + + V A G    L+ +A V V  
Sbjct: 68  EVFSVAAYEADMKAAIDKMVQDISALLVHRERAEHFERIPVSAGGEKRRLSDLAQVVVRG 127

Query: 63  PRMLVVSVWDK-------------EMVASVERGIHESNLGLNPIVEGQV-LRIPVPETTE 108
              + V V+                    V   +  ++       EG   +R+ +P+ T 
Sbjct: 128 ASTVHVHVFSVFFSALSLMSFFFLNSFCQVMSALRAADSKWTLQQEGNTAVRLQLPKVTS 187

Query: 109 ERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEND--IQKITD 166
           E R  L   A  +   +K +VRN+R+ G  HL K +     S D V   E D  +  + +
Sbjct: 188 EMREELKTKARVFLVTAKSAVRNMRQAGRSHLHKLQ-FKSRSIDDVKRRELDASLTTLME 246

Query: 167 STIKNIDSFFEEK 179
           + +   D  F EK
Sbjct: 247 TYVAKCDKVFNEK 259


>gi|307568226|pdb|3LF9|A Chain A, Crystal Structure Of Hiv Epitope-Scaffold
           4e10_d0_1is1a_001_c
          Length = 121

 Score = 91.2 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/80 (37%), Positives = 44/80 (55%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           TEERR  LVK+    AE  +++VRNI RD  + L    K  + +   ++    +IQK+TD
Sbjct: 34  TEERRKDLVKIVRGEAEGGRVAVRNIARDAANDLAALGKDKEVNWFDISQALWEIQKLTD 93

Query: 167 STIKNIDSFFEEKKKEIMHF 186
             +K ID     K+KE+M  
Sbjct: 94  VAVKKIDEVLAAKEKELMEV 113



 Score = 36.5 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 16/24 (66%)

Query: 8  QNIKDRMGDTISFLKKDMMTLRTG 31
          ++ ++RM  ++  LK ++  +RTG
Sbjct: 7  KDAQERMDKSVEALKNNLSKVRTG 30


>gi|328354509|emb|CCA40906.1| Ribosome-recycling factor [Pichia pastoris CBS 7435]
          Length = 223

 Score = 90.9 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 16/162 (9%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+ I+DR   T+   +K +  ++ G+ +P + D +KV       P   VA  T    R L
Sbjct: 69  LKEIEDRFKLTLQEHQKKINEIKLGKSNPKIFDSLKVSIAKDLQPFPSVAQTTSK-GRNL 127

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVE---GQVLRIPVPETTEERRLALVKVAHAYAE 123
           +V+V+D  +V  V   I  S L LNP V+    Q+L++P+   T E +   +K      E
Sbjct: 128 LVTVFDPSLVKYVVSSILSSGLNLNPEVDPKNPQLLKVPLTAPTAETKKETLKALKNNLE 187

Query: 124 KSKISVRN------IRRDGMDHLKKSRKSGKASEDMVASLEN 159
             + S+ N      IR   +   K ++      ED + + + 
Sbjct: 188 HYRHSITNKHSLASIRAHYLKEFKGNK------EDSIKNSKK 223


>gi|149019534|ref|ZP_01834853.1| ribosome recycling factor [Streptococcus pneumoniae SP23-BS72]
 gi|147930909|gb|EDK81889.1| ribosome recycling factor [Streptococcus pneumoniae SP23-BS72]
          Length = 74

 Score = 90.5 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 1  MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
          M  VI ++  K+RM  +   L ++   +R GR + S+LD V VE YG   PLNQ+A++T+
Sbjct: 1  MANVI-IEKAKERMTQSHQSLAREFGGIRAGRANASLLDRVHVEYYGVETPLNQIASITI 59

Query: 61 LEPRMLVV 68
           E R+L+V
Sbjct: 60 PEARVLLV 67


>gi|169622246|ref|XP_001804532.1| hypothetical protein SNOG_14341 [Phaeosphaeria nodorum SN15]
 gi|160704730|gb|EAT78212.2| hypothetical protein SNOG_14341 [Phaeosphaeria nodorum SN15]
          Length = 819

 Score = 90.5 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 83/190 (43%), Gaps = 11/190 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEA----YGSHV-PLNQV 55
           ++  D+ N++ ++   I  L  ++  LR G +++P +++ +KV+     +G     L  +
Sbjct: 626 DEAYDVSNLEAQILKAIEKLTHELSQLRGGGKLNPEVVESLKVQLGTAGHGKETVKLGDI 685

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNP----IVEGQVLRIPVPETTEERR 111
           A V V   RM+ V   +++ +  +   I  S   L P          +++P+P  T E R
Sbjct: 686 AQV-VPRGRMINVVCGEEDHIKPITTAIASSPHSLTPLAPDASNPLTIQVPLPPPTGESR 744

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
            A V  A   AEK+   ++  R+D    L+K   +     D +   +  ++++       
Sbjct: 745 QAAVDAAVKAAEKADKMIQVARQDHNKRLRKFEVNRDVLPDDLQKAKKRMEEVVKKGHTE 804

Query: 172 IDSFFEEKKK 181
           I    E  KK
Sbjct: 805 IKRISEGAKK 814


>gi|301126635|ref|XP_002909859.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101705|gb|EEY59757.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 109

 Score = 90.1 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 2/108 (1%)

Query: 76  VASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRD 135
           +  V++ I  +N   +   +   L I  P+ ++E R  L+K     AE+++  VR +R+D
Sbjct: 1   MPDVKKAIEGTNAVYSVREDVSSLEISFPKMSKETRADLLKATKKQAEQARQHVRRVRQD 60

Query: 136 GMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            M+H KK + +   SED V   +  IQK TDS I  ID     K+K++
Sbjct: 61  AMNHAKKLKDA--VSEDDVEVQKERIQKATDSAIAEIDKLLAAKEKDL 106


>gi|312220443|emb|CBY00384.1| hypothetical protein [Leptosphaeria maculans]
          Length = 403

 Score = 89.7 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 81/184 (44%), Gaps = 11/184 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE----AYGSH-VPLNQV 55
           ++  D+  ++  +   I  L  D+  LR+G +++P +++ +KV+    + G   V L  +
Sbjct: 90  DEAYDVSGLETEILKAIEKLTHDLSLLRSGGKMNPEVVEALKVQLGTVSEGKESVRLGDI 149

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPI----VEGQVLRIPVPETTEERR 111
           A V V   R+L +   ++  +  +   I  S   L P+         +++P+P  T E R
Sbjct: 150 AQV-VPRGRVLNIVCGEEGHIKPISSAIASSPHSLTPLAPEPSNPLTIQVPLPPPTGESR 208

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
            A V+ +   AE++   ++  R++    L+K   + +   D +   +  ++ +       
Sbjct: 209 RAAVEASIKAAERADKWIQTARQEHNKKLRKFELNKEVLPDDLQKAKKRMEDVVKKGHTE 268

Query: 172 IDSF 175
           +   
Sbjct: 269 VKRI 272


>gi|146331652|gb|ABQ22332.1| mitochondrial ribosome recycling factor precursor-like protein
           [Callithrix jacchus]
          Length = 90

 Score = 89.3 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 94  VEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDM 153
           VEG ++R+P+P+ T E R  LVK+A     K+K S+R +R + M+ LKKS+ +   SED 
Sbjct: 1   VEGTLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVRTNAMNKLKKSKDT--VSEDT 58

Query: 154 VASLENDIQKITDSTIKNIDSFFEEKKKEIM 184
           +  +E  I ++ D T+  ++     K KE++
Sbjct: 59  IRLIEKQISQMADDTVAELERHLAVKTKELL 89


>gi|330924822|ref|XP_003300793.1| hypothetical protein PTT_12143 [Pyrenophora teres f. teres 0-1]
 gi|311324892|gb|EFQ91113.1| hypothetical protein PTT_12143 [Pyrenophora teres f. teres 0-1]
          Length = 280

 Score = 89.3 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 80/185 (43%), Gaps = 11/185 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE----AYGSH-VPLNQV 55
           ++  D+  ++  +   +  L  D+  LR+G R++P +++ +KV+    ++G   V L  +
Sbjct: 87  DKAYDVSELEASILKALEKLTHDLSQLRSGGRLNPDIVENLKVQLGTASHGKESVRLGDI 146

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNP----IVEGQVLRIPVPETTEERR 111
           A V V   R+L V   ++  V  +   I  S   L P          +++P+P  T E R
Sbjct: 147 AQV-VPRGRVLNVICGEEAHVKPITTAIAASPHSLTPLSPESNNPLTIQVPLPPPTGESR 205

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
            A V  A   +E++   +   R++    L++   + +   D +   +  ++++       
Sbjct: 206 RAAVDAAGKASERADKLIHQARQEHNKKLRQYSLNREVLPDDLQKAKKLMEEVVKKGHVE 265

Query: 172 IDSFF 176
           +    
Sbjct: 266 VKRIV 270


>gi|50543588|ref|XP_499960.1| YALI0A10813p [Yarrowia lipolytica]
 gi|60390378|sp|Q6CHA2|RRF1_YARLI RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|49645825|emb|CAG83889.1| YALI0A10813p [Yarrowia lipolytica]
          Length = 264

 Score = 88.9 bits (220), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 10/190 (5%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHV-PLNQVANVTVLE 62
           +I+    +D    +++        ++ G  SP +++ ++V+     V  +  +A+V +  
Sbjct: 72  MIEWNKFEDLSAKSVAAFAAKAKEIKAGNNSPDLINNIEVKISKDEVYQIKDIASVALKG 131

Query: 63  PRMLVVSVWDKEMVASVERGIHESNLGLNPI---VEGQVLRIPVPETTEERRLALVKVAH 119
            R L +SV+D      V   I  S+L +NP       Q+L IP+P  + E R    K   
Sbjct: 132 GRTLSISVYDPSHTKQVTASILASDLNMNPQPQANSPQILNIPLPPPSAESRAEQQKELK 191

Query: 120 AYAEKSKI------SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           A     K        +  IR       KK        +D+V   +   +++  +    I+
Sbjct: 192 ALYNAFKADKKLTSGLAAIRDAFKKDHKKMADQKSIGKDVVKREDKKFEELQKAWTSKIE 251

Query: 174 SFFEEKKKEI 183
             F+    EI
Sbjct: 252 KEFKTVSDEI 261


>gi|189190870|ref|XP_001931774.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973380|gb|EDU40879.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 280

 Score = 88.5 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 84/190 (44%), Gaps = 11/190 (5%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE----AYGSH-VPLNQV 55
           ++  D+  ++  +   +  L  D+  LR+G +++P +++ +KV+    ++G   V L  +
Sbjct: 87  DKAYDVSELEASILKALEKLTHDLSQLRSGGKLNPEIVESLKVQLGTASHGKESVRLGDI 146

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNP----IVEGQVLRIPVPETTEERR 111
           A V V   R+L V   ++  V  +   I  S   L P          +++P+P  T E R
Sbjct: 147 AQV-VPRGRVLNVICGEEAHVKPITTAIAASPHSLTPLSPESNNPLTIQVPLPPPTGESR 205

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
            A V  A   +E++   ++  R++    L++   + +   D +   +  ++++       
Sbjct: 206 RAAVDAAGKASERADRLIQQARQEHNKKLRQYGLNREVLPDDLQKAKKLMEEVVKKGHVE 265

Query: 172 IDSFFEEKKK 181
           +    +  KK
Sbjct: 266 VKRIVDGAKK 275


>gi|256270599|gb|EEU05773.1| Rrf1p [Saccharomyces cerevisiae JAY291]
          Length = 230

 Score = 87.8 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 81/187 (43%), Gaps = 16/187 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +   T+   K+ M  ++ G  +P + + +  +   ++     +A  ++     L
Sbjct: 52  LKKAETQFKKTLEVQKQKMNEIKQGNFNPKVFNSLVFK---NNRKFTDIATTSLKGKNAL 108

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPI---VEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           +++V+D + V +V  G+  +NL L P         L++ +P  T E RL + K      E
Sbjct: 109 LITVFDPKDVKTVISGVLAANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFE 168

Query: 124 KSK-----ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           + K      S+  IR   +   K  +K      D V   E D++K+    +  +   F++
Sbjct: 169 EYKQSSLKDSLGTIRGSILKEFKSFKKD-----DAVRKAERDLEKLHKDYVNKLHDQFQK 223

Query: 179 KKKEIMH 185
            +K I+ 
Sbjct: 224 VEKSILK 230


>gi|255721287|ref|XP_002545578.1| hypothetical protein CTRG_00359 [Candida tropicalis MYA-3404]
 gi|240136067|gb|EER35620.1| hypothetical protein CTRG_00359 [Candida tropicalis MYA-3404]
          Length = 256

 Score = 87.8 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 79/194 (40%), Gaps = 16/194 (8%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSH-----VPLNQVANVT 59
           ID  ++       +S   K    ++ G+++P + D ++V   GSH     VP   VA  +
Sbjct: 66  IDFDHVTKNFETVLSKFNKAATDIKLGKLNPKIFDNLEVNI-GSHGQEELVPFTSVAQTS 124

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVK 116
           V   R  +++++D      V   I  S L ++  V+      +++P+P  T E +    K
Sbjct: 125 VK-GRNFIINLFDASYGKHVINSIIGSGLNMSGTVDPTNKFQVKVPIPTITSETKQENAK 183

Query: 117 VAHAYAEKSK-----ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
                 E  K      S+ ++R +     +   K  K S D    L   ++ +  + +  
Sbjct: 184 QLKEIYESYKNNHKTNSLNSVRGEVRHKFQSQLKHSKIS-DAQHQLLKKLENLHKTYLDK 242

Query: 172 IDSFFEEKKKEIMH 185
           +   F+  +K I+ 
Sbjct: 243 LTEAFKTAEKSILK 256


>gi|309800200|ref|ZP_07694383.1| ribosome recycling factor [Streptococcus infantis SK1302]
 gi|308116171|gb|EFO53664.1| ribosome recycling factor [Streptococcus infantis SK1302]
          Length = 75

 Score = 86.6 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/60 (36%), Positives = 38/60 (63%)

Query: 7  LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
          ++  K+RM  +   L ++  ++R GR + S+LD + VE YG   PLNQ+A++T+ E R+ 
Sbjct: 6  VEKAKERMTQSHHSLAREFGSIRAGRANASLLDRIHVEYYGVETPLNQIASITIPEARVF 65


>gi|27461183|gb|AAL79355.1| ribosome recycling factor [Phytoplasma sp. DIV]
          Length = 94

 Score = 86.2 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 44/83 (53%)

Query: 7  LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
          L +++ +M      + K+   +RTG  +P++LD + V  YG+   L  +A+++V E   L
Sbjct: 9  LASLETKMTQAQEVMLKNFCDIRTGTANPNILDKITVNYYGAPXFLKTLASISVSEGNQL 68

Query: 67 VVSVWDKEMVASVERGIHESNLG 89
           +  +D  ++ ++++      LG
Sbjct: 69 NIKPYDSXLIPNIKKVGXAPKLG 91


>gi|316969816|gb|EFV53856.1| putative ribosome recycling factor [Trichinella spiralis]
          Length = 267

 Score = 86.2 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 82/195 (42%), Gaps = 20/195 (10%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYG-SHVPLNQVANVT 59
           + + +D   +   M + +  L++  +   + + +    + + VE  G   VPLN +A VT
Sbjct: 80  LEKYLDEHAVVSEMENEVEKLREQYVQQLSLKNNIRAFEALSVEFDGKEPVPLNHIAQVT 139

Query: 60  VLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA 118
           +  P + ++++    + V +V + I ES L +    +   L +P+P  ++ +R  L K A
Sbjct: 140 LKNPHLAIINLSSTPQAVKAVMKAIAESGLDVGVQQQNAFLYVPLPRPSKAKREQLAKNA 199

Query: 119 HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI--------QKITDSTIK 170
                +    +R I R     L+K             SL+ +I        + +     +
Sbjct: 200 KILYNRCHDQLREIMRYHEVKLRKKE----------HSLQKEIYNSLIFHLEDLVRIYAQ 249

Query: 171 NIDSFFEEKKKEIMH 185
             +   + K++E+M 
Sbjct: 250 KAEKLMKAKQEELMQ 264


>gi|151943982|gb|EDN62275.1| mitochondrial ribosome recycling factor [Saccharomyces cerevisiae
           YJM789]
 gi|190405822|gb|EDV09089.1| mitochondrial ribosome recycling factor [Saccharomyces cerevisiae
           RM11-1a]
          Length = 230

 Score = 85.8 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 80/185 (43%), Gaps = 16/185 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +   T+   K+ M  ++ G  +P + + +  +   ++     +A  ++     L
Sbjct: 52  LKKAETQFKKTLEVQKQKMNEIKQGNFNPKVFNSLVFK---NNRKFTDIATTSLKGKNAL 108

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPI---VEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           +++V+D + V +V  G+  +NL L P         L++ +P  T E RL + K      E
Sbjct: 109 LITVFDPKDVKTVISGVLAANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFE 168

Query: 124 KS-----KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           +      K S+  IR   +   K  +K      D V   E D++K+    +  +   F++
Sbjct: 169 EYKQSSLKDSLGTIRGSILKEFKSFKKD-----DAVRKAERDLEKLHKDYVNKLHDQFQK 223

Query: 179 KKKEI 183
            +K I
Sbjct: 224 VEKSI 228


>gi|207344733|gb|EDZ71776.1| YHR038Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259147070|emb|CAY80324.1| Rrf1p [Saccharomyces cerevisiae EC1118]
          Length = 231

 Score = 85.8 bits (212), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 80/185 (43%), Gaps = 16/185 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +   T+   K+ M  ++ G  +P + + +  +   ++     +A  ++     L
Sbjct: 53  LKKAETQFKKTLEVQKQKMNEIKQGNFNPKVFNSLVFK---NNRKFTDIATTSLKGKNAL 109

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPI---VEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           +++V+D + V +V  G+  +NL L P         L++ +P  T E RL + K      E
Sbjct: 110 LITVFDPKDVKTVISGVLAANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFE 169

Query: 124 KS-----KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           +      K S+  IR   +   K  +K      D V   E D++K+    +  +   F++
Sbjct: 170 EYKQSSLKDSLGTIRGSILKEFKSFKKD-----DAVRKAERDLEKLHKDYVNKLHDQFQK 224

Query: 179 KKKEI 183
            +K I
Sbjct: 225 VEKSI 229


>gi|6321827|ref|NP_011903.1| Rrf1p [Saccharomyces cerevisiae S288c]
 gi|731650|sp|P38771|RRF1_YEAST RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|488171|gb|AAB68906.1| Yhr038wp [Saccharomyces cerevisiae]
 gi|3327238|dbj|BAA31687.1| FIL1 [Saccharomyces cerevisiae]
 gi|285809942|tpg|DAA06729.1| TPA: Rrf1p [Saccharomyces cerevisiae S288c]
          Length = 230

 Score = 84.7 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 80/185 (43%), Gaps = 16/185 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +   T+   K+ M  ++ G  +P + + +  +   ++     +A  ++     L
Sbjct: 52  LKKAETQFKKTLEIQKQKMNEIKQGNFNPKVFNSLVFK---NNRKFTDIATTSLKGKNAL 108

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPI---VEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           +++V+D + V +V  G+  +NL L P         L++ +P  T E RL + K      E
Sbjct: 109 LITVFDPKDVKTVISGVLAANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFE 168

Query: 124 KS-----KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           +      K S+  IR   +   K  +K      D V   E D++K+    +  +   F++
Sbjct: 169 EYKQSSLKDSLGTIRGSILKEFKSFKKD-----DAVRKAERDLEKLHKDYVNKLHDQFQK 223

Query: 179 KKKEI 183
            +K I
Sbjct: 224 VEKSI 228


>gi|212541408|ref|XP_002150859.1| ribosome recycling factor, putative [Penicillium marneffei ATCC
           18224]
 gi|210068158|gb|EEA22250.1| ribosome recycling factor, putative [Penicillium marneffei ATCC
           18224]
          Length = 293

 Score = 84.7 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 91/188 (48%), Gaps = 9/188 (4%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTG---RVSPSMLDLVKV---EAYGSHVPLNQVA 56
              D   ++  + D ++  K+D+  LR+G   R++P +++ ++V   +     V L++VA
Sbjct: 101 DPFDFSQLQTGISDALTRFKEDLQKLRSGGGGRLNPEVIEQLRVHIVKGSNETVRLSEVA 160

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLA 113
            V     R + + + +++++  V   I  S+L L P  +      L +P+P  T+E R  
Sbjct: 161 QVVPKGGRAVAIIIGEEDLIKPVNSAIISSSLSLTPQPDAHNPLQLNVPIPPPTKESRDQ 220

Query: 114 LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
            VK A    +K+  +VR+ R      L+  +K  +A  D +    + ++K+ +   K++ 
Sbjct: 221 AVKAAKGAMDKAASAVRSARAAIHKKLQDMQKRKEARPDDIRKAHDQMEKLVEKAQKDVK 280

Query: 174 SFFEEKKK 181
             FE  +K
Sbjct: 281 DTFESARK 288


>gi|323304735|gb|EGA58496.1| Rrf1p [Saccharomyces cerevisiae FostersB]
          Length = 182

 Score = 83.9 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 80/185 (43%), Gaps = 16/185 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           L+  + +   T+   K+ M  ++ G  +P + + +  +   ++     +A  ++     L
Sbjct: 4   LKKAETQFKKTLEVQKQKMNEIKQGNFNPKVFNSLVFK---NNRKFTDIATTSLKGKNAL 60

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPI---VEGQVLRIPVPETTEERRLALVKVAHAYAE 123
           +++V+D + V +V  G+  +NL L P         L++ +P  T E RL + K      E
Sbjct: 61  LITVFDPKDVKTVISGVLAANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFE 120

Query: 124 KS-----KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           +      K S+  IR   +   K  +K      D V   E D++K+    +  +   F++
Sbjct: 121 EYKQSSLKDSLGTIRGSILKEFKSFKKD-----DAVRKAERDLEKLHKDYVNKLHDQFQK 175

Query: 179 KKKEI 183
            +K I
Sbjct: 176 VEKSI 180


>gi|46107942|ref|XP_381030.1| hypothetical protein FG00854.1 [Gibberella zeae PH-1]
          Length = 858

 Score = 83.5 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 7/163 (4%)

Query: 19  SFLKKDMMT-LRTGRVSPSMLDLVKV-----EAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +  K  +   +  GR +P+ L  + V     E   +  PL ++A V     R + + V D
Sbjct: 687 AHFKTQLAGMIHGGRFNPTNLGSLPVTIKDEEGADATFPLRELAQVVPRSGRAISLLVND 746

Query: 73  KEMVASVERGIHES-NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           KE +  +   +  S      P          + +   ER+  + +      ++ K  +RN
Sbjct: 747 KEYIKPIMSAVQSSREFNQQPQRSEDNELELLLKVELERKDDVERRVKEAVQQWKDRIRN 806

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
            R      LK  +K+G    D+V   E ++QK+ D  +K ID 
Sbjct: 807 ARSRHEKTLKDWKKNGTVLPDIVKKAEKELQKVQDKKMKEIDQ 849


>gi|45184750|ref|NP_982468.1| AAL074Cp [Ashbya gossypii ATCC 10895]
 gi|60390517|sp|Q75F02|RRF1_ASHGO RecName: Full=Ribosome-recycling factor, mitochondrial; Short=RRF;
           AltName: Full=Ribosome-releasing factor, mitochondrial;
           Flags: Precursor
 gi|44980096|gb|AAS50292.1| AAL074Cp [Ashbya gossypii ATCC 10895]
          Length = 226

 Score = 83.5 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 69/182 (37%), Gaps = 6/182 (3%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           ++   +R   T+   KK +  ++ G+   +M D + V          ++A  +V    ML
Sbjct: 46  VKKATERFQHTVELHKKRLGQMKAGKPDATMFDGLAV--GNEKQKFTELAATSVKGKNML 103

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIV---EGQVLRIPVPETTEERRLALVKVAHAYAE 123
           +V+V+D +    V   I  + L +         Q L+I +P  T E R  L +      E
Sbjct: 104 IVTVFDPKDTKRVASAIVGAGLNVTTERVLENQQQLKISLPPVTTETRERLCRDMKKVFE 163

Query: 124 KSKISV-RNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
           + K S  R+        + K  K      D V  +  +I+ +       +    +  +K 
Sbjct: 164 EYKNSANRHSLGHVRSEVLKELKKLDKKNDSVRKVIQEIENLHKEYTAMLQEQLKHAEKN 223

Query: 183 IM 184
            M
Sbjct: 224 AM 225


>gi|241614866|ref|XP_002406692.1| ribosome recycling factor, putative [Ixodes scapularis]
 gi|215500850|gb|EEC10344.1| ribosome recycling factor, putative [Ixodes scapularis]
          Length = 263

 Score = 81.6 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 80/191 (41%), Gaps = 15/191 (7%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           +++V+ +Q  +  M   +  L+   +   +       +D ++V        L +VA ++ 
Sbjct: 78  LSEVVRIQQFRSEMQKVLQRLQDSFVKHLSLHSVAGNIDKIRVHVDSQEYSLAEVAQISK 137

Query: 61  LEPRMLVVSV--WDKEMVASVERG-----IHESNLGLNPIVEGQVLRIPVPETTEERRLA 113
              +++V+++  +       +            ++G +    G          T E R  
Sbjct: 138 KSAQLIVLNMASFPDVTGTLIHDAKLSRPCALLDVGRSDNRPGTF------RVTREHRET 191

Query: 114 LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           L K A A   K+K  +  I R  +  ++K++     SED+V +    ++   ++T++  D
Sbjct: 192 LSKNAKALFVKAKEDLVAIERKYLKEIQKNK--LGISEDVVYNASLQVKMEAENTVEQAD 249

Query: 174 SFFEEKKKEIM 184
           +  + K+KE++
Sbjct: 250 TMTKAKQKELL 260


>gi|153820415|ref|ZP_01973082.1| ribosome recycling factor [Vibrio cholerae NCTC 8457]
 gi|126509043|gb|EAZ71637.1| ribosome recycling factor [Vibrio cholerae NCTC 8457]
          Length = 60

 Score = 81.2 bits (200), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 34/58 (58%)

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           VRNIRRD  + LK   K  + SED     + +IQK+TD+ +K ID     K+KE+M  
Sbjct: 3   VRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDVLAAKEKELMEV 60


>gi|302924011|ref|XP_003053795.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734736|gb|EEU48082.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 873

 Score = 80.5 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 7/163 (4%)

Query: 19  SFLKKDMMT-LRTGRVSPSMLDLVKV-----EAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +  K  +   +  GR +P+ L  + V     EA     PL ++A V     R + + V D
Sbjct: 702 AHFKTQLAGMVHGGRFNPTNLGSLPVAVKDPEAGDGSFPLRELAQVVPRSGRTISLLVHD 761

Query: 73  KEMVASVERGIHES-NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           K  +  +   +  S      P          + +   ER+  +V+      +  K  +R 
Sbjct: 762 KAYIKPIMSAVQSSREFNQQPQRSEDNELELLLKVELERKDDVVRRIKEAVQLWKDRIRQ 821

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
            R      LK  +K+G    D+V   E ++QK+ D  +K+ID 
Sbjct: 822 ARSKHEKVLKDWKKTGAVLPDVVKKAEKELQKVQDKKMKDIDQ 864


>gi|156083138|ref|XP_001609053.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154796303|gb|EDO05485.1| conserved hypothetical protein [Babesia bovis]
          Length = 281

 Score = 80.1 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 4/170 (2%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSH--VPLNQVANVTVLEPRML 66
           N+K R+ +    L+  +  L   R +PS++D + VE  G      L  VA +    P  L
Sbjct: 106 NLKSRLKEAEEHLRYKISRLTLHRATPSLVDSLTVELPGEKKEKQLQYVARIISKGPYEL 165

Query: 67  VVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
            V   D   + +V   +    +     ++   + + +P  TE        V      + K
Sbjct: 166 QVLPLDIHHLDAVFVSLSTKLVDYKVSMQPDRISVVIPSMTELMIQQARSVVKETHNEVK 225

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
             VR IR D    LK  RK    S+DM    E ++  I   + + +D   
Sbjct: 226 TRVRTIRLDFAKKLKGMRKG--LSDDMYFRQEKELDSIVKQSERVVDQIA 273


>gi|167463764|ref|ZP_02328853.1| ribosome recycling factor [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 62

 Score = 80.1 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
            +K+++RNIRRD  + +KK  K+ + SED     ++DIQK TD  I  +D     K+KEI
Sbjct: 1   DAKVAIRNIRRDSNESIKKMEKT-EISEDESRRHQDDIQKSTDKYIAEVDKVLAAKEKEI 59

Query: 184 MHF 186
           M  
Sbjct: 60  MEV 62


>gi|205373431|ref|ZP_03226235.1| hypothetical protein Bcoam_09080 [Bacillus coahuilensis m4-4]
          Length = 62

 Score = 78.9 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 30/48 (62%)

Query: 7  LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQ 54
          +   K+RM   I+   +++ ++R GR + S+LD + VE YG+  P+NQ
Sbjct: 6  INTGKERMDKAIAAYSRELASIRAGRANASLLDGLSVEYYGAPTPINQ 53


>gi|119607930|gb|EAW87524.1| mitochondrial ribosome recycling factor, isoform CRA_d [Homo
           sapiens]
          Length = 273

 Score = 78.1 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 36/69 (52%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 154 EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 213

Query: 62  EPRMLVVSV 70
            P++++V++
Sbjct: 214 SPQLILVNM 222


>gi|116180868|ref|XP_001220283.1| hypothetical protein CHGG_01062 [Chaetomium globosum CBS 148.51]
 gi|88185359|gb|EAQ92827.1| hypothetical protein CHGG_01062 [Chaetomium globosum CBS 148.51]
          Length = 299

 Score = 77.8 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 75/187 (40%), Gaps = 17/187 (9%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYG---SHVPLNQVANVTV 60
            D  +++           +D+  LR+G R +  ++  + V+         PL ++A V  
Sbjct: 111 FDFADLQTAFDRAEKHFSEDLKKLRSGGRFNAEVIGAIPVQTDKKNPQTFPLRELATVAP 170

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESN-LGLNPIVEGQVLRIPVPETTE----ERRLALV 115
           L  R   +  +++  V ++   +  S+     P    +    P+ E T     ER  AL 
Sbjct: 171 LGGRRWSILAFEEGSVKAIVSAVQRSDEFNQQPQRSAEN---PL-ELTMTVEPERADALA 226

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           + A    +  ++ VR+      +  KK R  G    D    L++ +QK+ D  +K I   
Sbjct: 227 RRAKEVCQAWRVRVRDEAHRRAELHKKWRGEGVVLSDDAHKLKDKLQKLQDERMKAI--- 283

Query: 176 FEEKKKE 182
              K+KE
Sbjct: 284 -LAKEKE 289


>gi|159163384|pdb|1WIH|A Chain A, Solution Structure Of Rsgi Ruh-021, A Domain Ii Of
           Ribosome Recycling Factor From Mouse Cdna
          Length = 84

 Score = 76.6 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 31  GRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLG 89
           G    S LD + V      V LNQ+  +++  P++++V++    E  A+  + I ES + 
Sbjct: 1   GSSGSSGLDHITVVTADGKVALNQIGQISMKSPQVILVNMASFPECTAAAIKAIRESGMN 60

Query: 90  LNPIVEGQVLRIPVPETT 107
           LNP VEG ++R+P+P+ T
Sbjct: 61  LNPEVEGTLIRVPIPKVT 78


>gi|213407242|ref|XP_002174392.1| mitochondrial translation termination factor [Schizosaccharomyces
           japonicus yFS275]
 gi|212002439|gb|EEB08099.1| mitochondrial translation termination factor [Schizosaccharomyces
           japonicus yFS275]
          Length = 241

 Score = 75.8 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 69/159 (43%), Gaps = 13/159 (8%)

Query: 34  SPSMLDLVKVEAYGSH-VPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNP 92
           + + L+ V V         L  +A ++ +  ++L +  +  + V  + + I  SNL + P
Sbjct: 81  NVNQLEHVMVSKPKQEEHLLKDIAAISRVSGKVLNIKPYSPQDVKYIMKAITSSNLRMQP 140

Query: 93  IV-EGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASE 151
           ++ +   +++ + ETT E   AL K      +++K+++R +R      L + + S   SE
Sbjct: 141 VLKDSVTIQVRLQETTLETLKALAKQIKEQEDRTKVAIRLVRTSFQKKLARRKLSKVWSE 200

Query: 152 DMVASLENDIQK-----------ITDSTIKNIDSFFEEK 179
           D    +E D+Q            I +  +K +      K
Sbjct: 201 DECRKVEKDMQDTIQAQNGQLTTIIERYLKQLKEQSRNK 239


>gi|307568248|pdb|3LHP|S Chain S, Crystal Structure Of Hiv Epitope-Scaffold
           4e10_d0_1isea_004_n 4e10 Fv Complex
 gi|307568249|pdb|3LHP|T Chain T, Crystal Structure Of Hiv Epitope-Scaffold
           4e10_d0_1isea_004_n 4e10 Fv Complex
          Length = 123

 Score = 75.8 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 41/76 (53%)

Query: 106 TTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKIT 165
            TEER    +K+    AE+++++VRN+ RD  D      K  + +   ++    D+QK+T
Sbjct: 43  PTEERIKDWLKIVRGEAEQARVAVRNVGRDANDKAAALGKDKEINWFDISQSLWDVQKLT 102

Query: 166 DSTIKNIDSFFEEKKK 181
           D+ IK I++   + + 
Sbjct: 103 DAAIKKIEAALADMEA 118


>gi|119607931|gb|EAW87525.1| mitochondrial ribosome recycling factor, isoform CRA_e [Homo
           sapiens]
 gi|119607932|gb|EAW87526.1| mitochondrial ribosome recycling factor, isoform CRA_e [Homo
           sapiens]
 gi|158257050|dbj|BAF84498.1| unnamed protein product [Homo sapiens]
 gi|158259041|dbj|BAF85479.1| unnamed protein product [Homo sapiens]
          Length = 168

 Score = 75.8 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 80  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 139

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESN 87
            P++++V++    E +  +++  +  N
Sbjct: 140 SPQLILVNMASFPETMKQIKQYFNGPN 166


>gi|119607933|gb|EAW87527.1| mitochondrial ribosome recycling factor, isoform CRA_f [Homo
           sapiens]
          Length = 176

 Score = 75.1 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 36/69 (52%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 80  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 139

Query: 62  EPRMLVVSV 70
            P++++V++
Sbjct: 140 SPQLILVNM 148


>gi|55958146|emb|CAI14708.1| mitochondrial ribosome recycling factor [Homo sapiens]
 gi|221042068|dbj|BAH12711.1| unnamed protein product [Homo sapiens]
 gi|221045920|dbj|BAH14637.1| unnamed protein product [Homo sapiens]
          Length = 158

 Score = 75.1 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 36/69 (52%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 80  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 139

Query: 62  EPRMLVVSV 70
            P++++V++
Sbjct: 140 SPQLILVNM 148


>gi|119607928|gb|EAW87522.1| mitochondrial ribosome recycling factor, isoform CRA_c [Homo
           sapiens]
          Length = 186

 Score = 74.7 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 36/69 (52%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 80  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 139

Query: 62  EPRMLVVSV 70
            P++++V++
Sbjct: 140 SPQLILVNM 148


>gi|207111159|ref|ZP_03245321.1| ribosome recycling factor [Helicobacter pylori HPKX_438_CA4C1]
          Length = 63

 Score = 74.3 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 35/63 (55%)

Query: 99  LRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLE 158
           +++  P  T E+R  + K A A  EK+K++VRN R+D  + +KK  K  + SED     +
Sbjct: 1   IKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVRNTRQDANNKVKKLEKDKEISEDESKKAQ 60

Query: 159 NDI 161
             I
Sbjct: 61  EQI 63


>gi|323308800|gb|EGA62037.1| Rrf1p [Saccharomyces cerevisiae FostersO]
 gi|323337268|gb|EGA78521.1| Rrf1p [Saccharomyces cerevisiae Vin13]
 gi|323354795|gb|EGA86629.1| Rrf1p [Saccharomyces cerevisiae VL3]
          Length = 161

 Score = 74.3 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 16/167 (9%)

Query: 25  MMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIH 84
           M  ++ G  +P + + +  +   ++     +A  ++     L+++V+D + V +V  G+ 
Sbjct: 1   MNEIKQGNFNPKVFNSLVFK---NNRKFTDIATTSLKGKNALLITVFDPKDVKTVISGVL 57

Query: 85  ESNLGLNPI---VEGQVLRIPVPETTEERRLALVKVAHAYAEKS-----KISVRNIRRDG 136
            +NL L P         L++ +P  T E RL + K      E+      K S+  IR   
Sbjct: 58  AANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFEEYKQSSLKDSLGTIRGSI 117

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +   K  +K      D V   E D++K+    +  +   F++ +K I
Sbjct: 118 LKEFKSFKKD-----DAVRKAERDLEKLHKDYVNKLHDQFQKVEKSI 159


>gi|55958145|emb|CAI14707.1| mitochondrial ribosome recycling factor [Homo sapiens]
          Length = 153

 Score = 73.5 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 36/69 (52%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 80  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 139

Query: 62  EPRMLVVSV 70
            P++++V++
Sbjct: 140 SPQLILVNM 148


>gi|323348363|gb|EGA82611.1| Rrf1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 161

 Score = 73.5 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 16/167 (9%)

Query: 25  MMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIH 84
           M  ++ G  +P + + +  +   ++     +A  ++     L+++V+D + V +V  G+ 
Sbjct: 1   MNEIKQGNFNPKVFNXLVFK---NNRKFTDIATTSLKGKNALLITVFDPKDVKTVISGVL 57

Query: 85  ESNLGLNPI---VEGQVLRIPVPETTEERRLALVKVAHAYAEKS-----KISVRNIRRDG 136
            +NL L P         L++ +P  T E RL + K      E+      K S+  IR   
Sbjct: 58  AANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFEEYKQSSLKDSLGTIRGSI 117

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +   K  +K      D V   E D++K+    +  +   F++ +K I
Sbjct: 118 LKEFKSFKKD-----DAVRKAERDLEKLHKDYVNKLHDQFQKVEKSI 159


>gi|68072191|ref|XP_678009.1| ribosome releasing factor [Plasmodium berghei strain ANKA]
 gi|56498332|emb|CAI00267.1| ribosome releasing factor, putative [Plasmodium berghei]
          Length = 178

 Score = 73.1 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 3/167 (1%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M      +KK+        VS +M +  KV+       +N + ++   E  + +++ +
Sbjct: 13  EKMNKVYEHIKKESYRFNLNNVSSAMFENEKVKINERIYTINHICHIKKKE-NLFIITPY 71

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D   V  +     +    L   ++ + +   +P  +E  +  +        E+SKI++RN
Sbjct: 72  DPYFVNFIYLHFTKEYSELKFYIKDKSICAVIPPLSEHLKNEIKNKIKDKIEESKITLRN 131

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           +R+  M+ L+K +      +D+    +N IQ + D T K I+  F E
Sbjct: 132 VRKKFMNKLEKIK--NYIGKDIYFKQKNHIQSLHDQTKKKIEKIFNE 176


>gi|55958150|emb|CAI14712.1| mitochondrial ribosome recycling factor [Homo sapiens]
          Length = 124

 Score = 72.0 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
             +I+L+ + + M   I  LK +       R SP  LD + V      + LNQ++ +++ 
Sbjct: 36  EDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMK 95

Query: 62  EPRMLVVSVWD-KEMVASVERGIHESN 87
            P++++V++    E +  +++  +  N
Sbjct: 96  SPQLILVNMASFPETMKQIKQYFNGPN 122


>gi|82593721|ref|XP_725122.1| ribosome releasing factor [Plasmodium yoelii yoelii str. 17XNL]
 gi|23480010|gb|EAA16687.1| ribosome releasing factor-related [Plasmodium yoelii yoelii]
          Length = 413

 Score = 71.6 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 76/167 (45%), Gaps = 3/167 (1%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M      +KK+        VS +M +  +V+       +N + ++   E  + +++ +
Sbjct: 248 EKMNKIYDHIKKESYRFNLNNVSSAMFESERVKINEQIYTINHICHIKKKE-NLFIITPY 306

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D   V  +     +    L   ++ + + + +P  +E  +  +        E+SKI++RN
Sbjct: 307 DPYFVNFIYIHFTKEYNELKFYIKDKSVYVVIPPLSEHLKNEIKNKIKDKIEESKITLRN 366

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           +R+  M+ L+K +      +D+    +N IQ + D T KNI+  F E
Sbjct: 367 VRKKFMNKLEKIK--NYIGKDIYFKQKNHIQSLHDQTKKNIEKIFNE 411


>gi|324522561|gb|ADY48080.1| Ribosome-recycling factor [Ascaris suum]
          Length = 267

 Score = 68.9 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 7/151 (4%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAY-GSHVPLNQVANVTVLEPRM 65
           +Q     M    + L  ++    + +V     + + V+   G    +N++  VT+  P+M
Sbjct: 87  VQGALKEMKHLEAILNDELAKHFSMQVDLRTYEEIVVKLDNGEEHKMNRLGRVTLKSPQM 146

Query: 66  LVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAH-AYAE 123
           ++++  D    + + +  + +SNL +NP  EG  L +PVP+ T ERR  L   A      
Sbjct: 147 VMINFGDNPTAIKAAKLALQKSNLNVNPQQEGVTLYVPVPKMTRERREYLASTAKAKMFN 206

Query: 124 KSKISVRNIRRDGMDHLKKSRKSGKASEDMV 154
             K ++  +            K    S+D  
Sbjct: 207 DYKEALNEVYARYNKKSSNELK----SQDDA 233


>gi|322695925|gb|EFY87725.1| ribosomal recycling factor precursor, putative [Metarhizium acridum
           CQMa 102]
          Length = 290

 Score = 68.9 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 7/162 (4%)

Query: 19  SFLKKDMMTLR-TGRVSPSMLDLVKV-----EAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
           ++ K  + T+   GR +PS L  + +         S  PL ++A V     R + + V D
Sbjct: 116 TYYKSALQTILHGGRFNPSALGGLPIAVKSASGEASTFPLGELAQVVPRTNRTISLLVND 175

Query: 73  KEMVASVERGIHES-NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +E +  +   +  S      P          + +   ER+  LV+         +  VR 
Sbjct: 176 REYIKPIMSAVQSSREFNQQPQRSDDNDLELLLKVELERKEELVRRIRETTHAWRDKVRQ 235

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
            R      LK  +K G    D+V   E ++QK+ D+ +K ID
Sbjct: 236 ARTRHDKVLKGWQKDGTVLRDVVRRAERELQKLQDAKMKEID 277


>gi|154299907|ref|XP_001550371.1| predicted protein [Botryotinia fuckeliana B05.10]
 gi|150857124|gb|EDN32316.1| predicted protein [Botryotinia fuckeliana B05.10]
          Length = 119

 Score = 68.1 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 3/109 (2%)

Query: 76  VASVERGIHESNLGLNPIVEGQ---VLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
           +  +   I  S L L P  + Q    L IP+P  T+E R A ++ A    E +   VRN 
Sbjct: 6   IKPILSTIQSSTLSLQPTPDPQNPLALNIPIPPPTKESRDAALQAASKAGEIASNGVRNA 65

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           R      L+          D       +++K+ +     +    E  +K
Sbjct: 66  RGAMQKKLRAMEVKKTVRPDDSKKAHKEMEKVVEKGNGEVKKIVEAARK 114


>gi|156093956|ref|XP_001613016.1| ribosome releasing factor [Plasmodium vivax SaI-1]
 gi|148801890|gb|EDL43289.1| ribosome releasing factor, putative [Plasmodium vivax]
          Length = 422

 Score = 66.6 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 76/171 (44%), Gaps = 3/171 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +   ++M    S++KK+        +S ++ +  KV+     + +  ++++   E  + +
Sbjct: 253 KTCAEKMESVYSYIKKESYRFNLNSISNTLFENEKVKINDQLMTIKHMSHIRKKE-NLFI 311

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ +D   V  +     +    L   V+ + L   VP  +E  +  +        E SK 
Sbjct: 312 ITPYDPYYVNFIYNHFVKEYKELKFYVKDRSLYAVVPPLSENLKNEIKIKIKEKVEDSKG 371

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           ++RN+R+  +  L+K R  G+  +D+     N IQ + D T K I++   E
Sbjct: 372 TLRNVRKQMLAKLEKLR--GRIGKDIYFFQRNHIQSLHDQTRKRIEALLSE 420


>gi|124801048|ref|XP_001349596.1| apicoplast ribosomal releasing factor precursor, putative
           [Plasmodium falciparum 3D7]
 gi|3845171|gb|AAC71867.1| apicoplast ribosomal releasing factor precursor, putative
           [Plasmodium falciparum 3D7]
          Length = 498

 Score = 66.2 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 3/167 (1%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVW 71
           ++M     FLKK+        VS  M +  KV+       +  + ++   E  +  ++ +
Sbjct: 333 EKMNKVYEFLKKESYRFNLNNVSNDMFENEKVKINERIYTVKHICHIKKKE-NLFTITPY 391

Query: 72  DKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           D   V  + +   +    L   V+ + L   +P  +E  +  +        E SK+++R 
Sbjct: 392 DPYFVNFLYQHFIKEFDELKFYVKDKSLYAIIPPISENLKNEIKMKIKRKIEDSKVTLRT 451

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           +R+  MD L+K +   K  +D+    +N IQ I D T KNI+  F +
Sbjct: 452 VRKQMMDKLEKFK--NKIGKDIYFKQKNYIQSIHDQTKKNIEKLFAD 496


>gi|308485188|ref|XP_003104793.1| hypothetical protein CRE_23987 [Caenorhabditis remanei]
 gi|308257491|gb|EFP01444.1| hypothetical protein CRE_23987 [Caenorhabditis remanei]
          Length = 238

 Score = 64.3 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 14/157 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAY-GSHVPLNQVANVTVLEPRM 65
           +QN    +    + L +++    + +V     + + V+   G   PL+ VA VT+  P M
Sbjct: 57  VQNALKEIQRVETLLVEELTRHFSLKVDIRQYEDIMVKLENGKEKPLSMVARVTLKSPLM 116

Query: 66  LVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ++++  D    + + +  I +S L + P  EG VL + VP  ++ERR          A  
Sbjct: 117 VMMNFQDNPTAIKTAKLAIQKSTLNVTPQQEGAVLYVNVPPMSKERRE-------KMASD 169

Query: 125 SKISVRNIRRDGMDHL-----KKSRKSGKASEDMVAS 156
           +K  + N  +  ++ +     KKS        D    
Sbjct: 170 AKGRILNEYKKAINEIYSTSDKKSSAEFSTRPDEAKK 206


>gi|193203211|ref|NP_491262.2| hypothetical protein T20F5.3 [Caenorhabditis elegans]
 gi|152031757|sp|P91478|RRFM_CAEEL RecName: Full=Probable ribosome-recycling factor, mitochondrial;
           Short=RRF; AltName: Full=Ribosome-releasing factor,
           mitochondrial; Flags: Precursor
 gi|125490470|gb|AAB37664.2| Hypothetical protein T20F5.3 [Caenorhabditis elegans]
          Length = 238

 Score = 64.3 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 14/157 (8%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAY-GSHVPLNQVANVTVLEPRM 65
           +Q     +      L +++    + +V     + V V+   G   PL+ +A VT+  P M
Sbjct: 57  VQETIKEIQRVEGLLVEELTRHFSLKVDIRQYEDVMVKLENGKDKPLSMIARVTLKSPLM 116

Query: 66  LVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEK 124
           ++++  D    + + +  I +S L + P  EG VL + VP  ++ERR          A  
Sbjct: 117 IMINFQDNPSAIKAAKLAIQKSTLNVTPQQEGAVLYVNVPPMSKERRE-------KMASD 169

Query: 125 SKISVRNIRRDGMDHL-----KKSRKSGKASEDMVAS 156
           +K  + N  +  ++ +     KKS        D    
Sbjct: 170 AKGRILNEYKKAINEIYSKSDKKSSNEFSTRPDEAKK 206


>gi|84994562|ref|XP_952003.1| hypothetical protein [Theileria annulata]
 gi|65302164|emb|CAI74271.1| hypothetical protein TA14705 [Theileria annulata]
          Length = 254

 Score = 63.5 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 54/148 (36%), Gaps = 2/148 (1%)

Query: 9   NIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVV 68
             + ++      +K ++  +   + +PS++  + ++       L  +A++       L V
Sbjct: 105 ECETKLKSIEDQVKSELAKICEHKAAPSLIGHILIQTETGRKQLRYLASIVNKGNFELEV 164

Query: 69  SVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
           + +  E +  +   +     G N  +    + I +P+   + +    +            
Sbjct: 165 TPFSMENLYGIFSTLSNELTGYNVKLMPSFVSIVIPQMGSDMKKKSQENVKRIMNMGMEQ 224

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVAS 156
           +R  R++ M  LK        S+DM+  
Sbjct: 225 IRLARQNSMKSLKNME--SGLSQDMLFK 250


>gi|289617036|emb|CBI56263.1| unnamed protein product [Sordaria macrospora]
          Length = 313

 Score = 63.1 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 71/192 (36%), Gaps = 22/192 (11%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGSHV----PLNQVANV- 58
            DL ++              + T RTG R S   +  + +           PL  +A V 
Sbjct: 123 YDLSDLTYAFDRADKHYLDALKTFRTGSRFSADSIGALPIFPDKKDTSLTYPLRDLATVA 182

Query: 59  -TVLEPRMLVVSVWDKEMVASVERGIHE-SNLGLNPIVEGQV---LRIPVPETTEERRLA 113
                 R   +  +D+  V  +   + +  +    P    +    L I V     ER   
Sbjct: 183 QVSGSGRKWSILCFDESSVKPIMSAVQKSPDFNQQPQRSEENPLELTITVEP---ERAED 239

Query: 114 LVKVAHAYAEKSKISVR--NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
           L K      ++ +  +R  + +R+ +   KK +  G   ED V SL+  +QK+ D  +K 
Sbjct: 240 LQKRVKELCQQWRDKLRAESHKREALH--KKWKGQGSILEDDVKSLKTKVQKLQDERMKG 297

Query: 172 IDSFFEEKKKEI 183
           +      ++KE+
Sbjct: 298 V----AVREKEV 305


>gi|221053778|ref|XP_002258263.1| ribosome recycling factor [Plasmodium knowlesi strain H]
 gi|193808096|emb|CAQ38800.1| ribosome recycling factor, putative [Plasmodium knowlesi strain H]
          Length = 282

 Score = 62.0 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 61/149 (40%), Gaps = 8/149 (5%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D +    +  + +   +K M  +    +S    + + +     +  L+ +A V V   +
Sbjct: 105 LDYEPYDTKTQEIVKGFEKKMKKIYDNNLSVDYFNNIVISKEKQNYNLSDLAQVVVKSSK 164

Query: 65  MLVVSVWDKEMVASVERGIHESNL-----GLNPIVEGQVLRIPVPETTEERRLALVKVAH 119
           ++    +   +++  ++ I+   L           +GQ + + +P  TE+ +L   K A 
Sbjct: 165 VIC---FFPYIISDAQKIIYHLKLKDNTWNPTISNDGQHIFLHIPPLTEDVKLKKRKEAK 221

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGK 148
              EK K  +RN+R    D + K  +  +
Sbjct: 222 ELLEKMKNDLRNLRHRMRDDIAKLLQGEE 250


>gi|322712078|gb|EFZ03651.1| ribosomal recycling factor, putative [Metarhizium anisopliae ARSEF
           23]
          Length = 261

 Score = 60.8 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 7/162 (4%)

Query: 19  SFLKKDMMTLR-TGRVSPSMLDLVKVEA-----YGSHVPLNQVANVTVLEPRMLVVSVWD 72
           +  K  + T+   GR +PS L  + +         S  PL ++A V     R + + V D
Sbjct: 87  THYKSALQTILHGGRFNPSALGALPITIKSASGEASTFPLRELAQVVPRTNRTISLLVND 146

Query: 73  KEMVASVERGIHES-NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
           +E +  +   +  S      P          +     ERR  LV+         +  VR 
Sbjct: 147 REYIKPIMSAVQSSREFNQQPQRSDDNDLELLLRVELERREELVRRVKETTHAWRDKVRQ 206

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
            R      LK  +K G   +D+V   E ++QK+ D  +K ID
Sbjct: 207 ARTRHDKVLKGWQKDGTVLKDVVRRAERELQKLQDGKMKEID 248


>gi|221053149|ref|XP_002257949.1| ribosome releasing factor [Plasmodium knowlesi strain H]
 gi|193807781|emb|CAQ38486.1| ribosome releasing factor, putative [Plasmodium knowlesi strain H]
          Length = 410

 Score = 60.0 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 75/171 (43%), Gaps = 3/171 (1%)

Query: 8   QNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLV 67
           +   ++M    +++KK+        +S +M +  K++     + +  ++++   E  + +
Sbjct: 241 KTCAEKMESVYNYIKKESYRFNLSSISNTMFENEKIKINDQILIIKHISHIKKKE-NLFM 299

Query: 68  VSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
           ++ +D   V  +     +    L   V+ + +   VP  +E  +  +        E SK 
Sbjct: 300 ITPFDPYYVNFIYNHFVKEYKELKFYVKDRSVYAVVPPLSENLKNEIRIKIKEKIEDSKA 359

Query: 128 SVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
           ++RN+R+  +  L K R  G+  +D+     N IQ + D T K I++   E
Sbjct: 360 TLRNVRKQMLTKLDKMR--GRIGKDIYFMQRNHIQSLHDQTRKRIEAILNE 408


>gi|19112234|ref|NP_595442.1| mitochondrial translation termination factor [Schizosaccharomyces
           pombe 972h-]
 gi|74582545|sp|O74734|RRF1_SCHPO RecName: Full=Putative ribosomal recycling factor, mitochondrial;
           Flags: Precursor
 gi|3738147|emb|CAA21248.1| mitochondrial translation termination factor [Schizosaccharomyces
           pombe]
          Length = 244

 Score = 60.0 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 58/135 (42%), Gaps = 4/135 (2%)

Query: 48  SHVP---LNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPI-VEGQVLRIPV 103
           +  P   L ++A V+    + +++  ++   + ++ + I +S        +    + +  
Sbjct: 104 APTPSRLLREIAAVSQKGSQQIIIRPFEDVDIKNILKAIEDSRYPFVANKLNASTIEVKP 163

Query: 104 PETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQK 163
             TT E R  L KV   YA+ S+  +  +R +    + K++KS   + D     E ++Q 
Sbjct: 164 QRTTLESRQQLAKVLEGYAKDSREQLSAMRTELKKEIAKNKKSKAWTSDDCYKAEAEMQT 223

Query: 164 ITDSTIKNIDSFFEE 178
              + I  +DS  + 
Sbjct: 224 AFKNAINLLDSGLKS 238


>gi|294953473|ref|XP_002787781.1| Ribosome recycling factor, putative [Perkinsus marinus ATCC 50983]
 gi|239902805|gb|EER19577.1| Ribosome recycling factor, putative [Perkinsus marinus ATCC 50983]
          Length = 193

 Score = 59.3 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 73/183 (39%), Gaps = 8/183 (4%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
           M+    L+     + + +  +K  +  ++  + SP +   + V    +  PL  ++ +++
Sbjct: 15  MDHAKMLKEQTQALDEEVRDMKAALQEVQMEQASPELFRSITV----AEKPLLNISQMSI 70

Query: 61  LEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHA 120
           L    +  SV+D  +  + ++ I           +G  + + +P+ T E R   +     
Sbjct: 71  LNATTVNFSVFDDGLAGACQKAIQLRGKNWTVNKDGNKISVVLPKVTREVRNECLNRCKG 130

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
             +K + ++ +IR   ++  ++   S +  +   A     I KI       +     EK+
Sbjct: 131 ILKKYQRNINSIRATMLEENRRMMPSTEMEKTEAAK----IDKIYKQRADQLVVLLREKE 186

Query: 181 KEI 183
           + +
Sbjct: 187 QAL 189


>gi|23335168|ref|ZP_00120406.1| COG0233: Ribosome recycling factor [Bifidobacterium longum DJO10A]
          Length = 58

 Score = 58.5 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 32/58 (55%)

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           +RNIRR   + + K+ K G+  ED    L  D+ K+T S    ID+  E K+KEIM  
Sbjct: 1   MRNIRRKTKETIDKAVKDGEMGEDEGDRLLKDLDKVTKSVTDEIDTLLETKQKEIMEV 58


>gi|268560952|ref|XP_002646329.1| Hypothetical protein CBG12038 [Caenorhabditis briggsae]
 gi|187029873|emb|CAP31083.1| hypothetical protein CBG_12038 [Caenorhabditis briggsae AF16]
          Length = 198

 Score = 58.1 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 14/125 (11%)

Query: 39  DLVKVEAY-GSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEG 96
           + V V+   G   PL+ VA VT+  P +++++  D    + + +  I +S L + P  EG
Sbjct: 49  EDVMVKLDNGKEKPLSLVARVTLKSPLIVMLNFQDNPSAIKAAKLAIQKSTLNVTPQQEG 108

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL-----KKSRKSGKASE 151
            VL + VP T++ERR  +          +K  + N  +  ++ +     KKS     +  
Sbjct: 109 AVLYVNVPPTSKERREKMAT-------DAKGRILNEYKKAINEIYSTCDKKSSAEFSSRP 161

Query: 152 DMVAS 156
           D    
Sbjct: 162 DEAKK 166


>gi|156098165|ref|XP_001615115.1| ribosome recycling factor [Plasmodium vivax SaI-1]
 gi|148803989|gb|EDL45388.1| ribosome recycling factor, putative [Plasmodium vivax]
          Length = 274

 Score = 57.3 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 58/146 (39%), Gaps = 2/146 (1%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPR 64
           +D ++   +  + +   +K M  +    +S    + + +        L+ +A V V   R
Sbjct: 99  VDYESYDVKAQEILKAFEKKMKKIYENNLSVDFFNSMVISKEKETFSLSDLAQVVVKSSR 158

Query: 65  MLVVSVWDKEMVASVERGIHESNLGLNP--IVEGQVLRIPVPETTEERRLALVKVAHAYA 122
           ++    +       +   +   +   NP    +GQ + + +P  TE+ +L   K A    
Sbjct: 159 VIYFLPYMASDAQRIIYHLKMKDNTWNPTMSNDGQQILLHIPPLTEDVKLKKRKEAKDLL 218

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGK 148
           EK K  +RN+R    D + +  +  +
Sbjct: 219 EKIKNDLRNLRHRVRDDIARLLQGEE 244


>gi|70944426|ref|XP_742145.1| ribosome releasing factor [Plasmodium chabaudi chabaudi]
 gi|56520960|emb|CAH88742.1| ribosome releasing factor, putative [Plasmodium chabaudi chabaudi]
          Length = 141

 Score = 57.3 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 65/142 (45%), Gaps = 3/142 (2%)

Query: 37  MLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG 96
           M +  KV+       +N + ++   E  + +++ +D   V  + +   +    L   ++ 
Sbjct: 1   MFENEKVKINEQIYTINHICHIKKKE-NLFIITPYDPYFVNFIYQHFIKEYNELKFYIKD 59

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
           + +   +P  +E  +  +        E+SKI++RN+R+  M  L+K +      +D+   
Sbjct: 60  KSVYAVIPPLSEHLKNEIKNKIKDKIEESKITLRNVRKKFMTKLEKIK--NYIGKDIYFK 117

Query: 157 LENDIQKITDSTIKNIDSFFEE 178
            +N IQ + D T K+I+  F E
Sbjct: 118 QKNHIQSLHDQTKKSIEKIFNE 139


>gi|171687201|ref|XP_001908541.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943562|emb|CAP69214.1| unnamed protein product [Podospora anserina S mat+]
          Length = 293

 Score = 57.0 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 69/189 (36%), Gaps = 15/189 (7%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLR--TGRVSPSMLDLVKVEAYGSHV---PLNQVA 56
               +L  +      T S     +  LR  TGR +   +  + V           L ++A
Sbjct: 104 EDPFNLDPLIALFQKTESHYTSQLALLRSPTGRFNVESIGAIPVSLDKKSTVTYRLQELA 163

Query: 57  NVTVLEPRMLVVSVWDKEMVASVERGIHE-SNLGLNPI-VEGQVLRIPVPETTEERRLAL 114
            V  L  R   +  +++  V  +   + +  +    P   E   L + +     E+   L
Sbjct: 164 TVAPLGGRRWSILAFEEASVKPIISAVLKSPDFNQQPQRNEENPLELTM-TVEPEKVDDL 222

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           VK A     + +  +R+   +   H    +K+    +D +  ++  ++K+ D  +K    
Sbjct: 223 VKRAKDLCTEWRNKLRD---ETHKHETHVKKNKSLLKDDLFKIKEALKKLQDERMK---- 275

Query: 175 FFEEKKKEI 183
               K+KE+
Sbjct: 276 VVANKEKEV 284


>gi|218672183|ref|ZP_03521852.1| ribosome recycling factor [Rhizobium etli GR56]
          Length = 41

 Score = 56.6 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/41 (43%), Positives = 28/41 (68%)

Query: 1  MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLV 41
          M++ ID++ +K RM   +S  K D+ +LRTGR S ++LD V
Sbjct: 1  MSEGIDIKELKRRMDGAVSAFKSDIASLRTGRASANILDPV 41


>gi|323333350|gb|EGA74747.1| Rrf1p [Saccharomyces cerevisiae AWRI796]
          Length = 127

 Score = 56.6 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 11/129 (8%)

Query: 25  MMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIH 84
           M  ++ G  +P + + +  +   ++     +A  ++     L+++V+D + V +V  G+ 
Sbjct: 1   MNEIKQGNFNPKVFNSLVFK---NNRKFTDIATTSLKGKNALLITVFDPKDVKTVISGVL 57

Query: 85  ESNLGLNPI---VEGQVLRIPVPETTEERRLALVKVAHAYAEKS-----KISVRNIRRDG 136
            +NL L P         L++ +P  T E RL + K      E+      K S+  IR   
Sbjct: 58  AANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFEEYKQSSLKDSLGTIRGSI 117

Query: 137 MDHLKKSRK 145
           +   K  +K
Sbjct: 118 LKEFKSFKK 126


>gi|170585046|ref|XP_001897299.1| ribosome recycling factor family protein [Brugia malayi]
 gi|158595296|gb|EDP33861.1| ribosome recycling factor family protein [Brugia malayi]
          Length = 269

 Score = 55.4 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 3/121 (2%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEA-YGSHVPLNQVANVTVLEPRMLVVSV 70
             M        +++    + ++     +   V+   G    LN +  + ++ P ++ V  
Sbjct: 98  KEMKSLEDIFMQELTKSLSLKIDLRTYEDFVVKIEDGKQYKLNTLGRIKLVNPLLISVDF 157

Query: 71  WD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA-HAYAEKSKIS 128
            D    +      I +S L + P  EG +L I +P  T ERR  +  VA        K +
Sbjct: 158 SDNPSAIKPARLAIEQSKLNVTPRQEGAILYISLPRITRERREHMANVASKKLLNDYKKA 217

Query: 129 V 129
           +
Sbjct: 218 L 218


>gi|82705419|ref|XP_726962.1| ribosome recycling factor [Plasmodium yoelii yoelii str. 17XNL]
 gi|23482586|gb|EAA18527.1| ribosome recycling factor [Plasmodium yoelii yoelii]
          Length = 266

 Score = 55.4 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 68/183 (37%), Gaps = 8/183 (4%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVL 61
           N  +D ++   ++ + I      M  L    ++    + + V        L+ ++ V + 
Sbjct: 87  NNNVDYKSYDIKIEEIIKNFDIKMKKLLENTLTVDFFNNIVVTKDKKKYKLSDLSQVVIK 146

Query: 62  EPRMLVVSVWDKEMVASVERGIHESNLGLNPI--VEGQVLRIPVPETTEERRLALVKVAH 119
             + +    +    +  +   +   +   NP    +GQ + + +P  T E +L   K A 
Sbjct: 147 SSKTIFFYPYIISDIQKIIHSLKIKDNTWNPTTPNDGQYILLHIPPLTNEIKLKKKKEAK 206

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN-DIQKITDSTIKNIDSFFEE 178
              EK K  +R+IR    D +           D     E   +     + +KNI+S +E+
Sbjct: 207 DILEKVKNDIRSIRHKIRDFI-----GKNIEGDEWKIEEKNKLDNYIKNKVKNIESVYEK 261

Query: 179 KKK 181
             K
Sbjct: 262 YTK 264


>gi|312076405|ref|XP_003140846.1| ribosome recycling factor family protein [Loa loa]
 gi|307763995|gb|EFO23229.1| ribosome recycling factor family protein [Loa loa]
          Length = 269

 Score = 54.3 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 12  DRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEA-YGSHVPLNQVANVTVLEPRMLVVSV 70
             M        +++    + +      +   V+   G    LN +  + ++ P ++ V  
Sbjct: 98  KEMKSLEDIFVQELTKSLSLKADLRTYEDFVVKTEDGKQYKLNTLGRIKLVNPLLISVDF 157

Query: 71  WD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVA-HAYAEKSKIS 128
            D   ++ S    I +S L + P  EG VL I +P  T ERR  +  VA      + K +
Sbjct: 158 TDNPAVIKSARLAIEQSKLNVTPRQEGAVLYISLPRITRERRENVANVASKKLLNEYKKA 217

Query: 129 V 129
           +
Sbjct: 218 L 218


>gi|85116368|ref|XP_965041.1| hypothetical protein NCU07494 [Neurospora crassa OR74A]
 gi|28926842|gb|EAA35805.1| predicted protein [Neurospora crassa OR74A]
          Length = 317

 Score = 54.3 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 70/192 (36%), Gaps = 22/192 (11%)

Query: 5   IDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVEAYGSHV----PLNQVANV- 58
            DL ++              + T R+G R S   +  + +           PL  +A V 
Sbjct: 127 YDLSDLTYAFDRADKHYLDALKTFRSGSRFSADSIGSLPIFPDKKDTSLSYPLRDLATVA 186

Query: 59  -TVLEPRMLVVSVWDKEMVASVERGIHE-SNLGLNPIVEGQV---LRIPVPETTEERRLA 113
                 R   +  +D+  V  +   + +  +    P    +    L I V     ER   
Sbjct: 187 QVSGSGRKWSILCFDESSVKPIMSAVQKSPDFNQQPQRSEENPLELTITVEP---ERAED 243

Query: 114 LVKVAHAYAEKSKISVR--NIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
           L K      +  +  +R    +R+ +   KK ++  K  +D V +L+  +QK+ D  ++ 
Sbjct: 244 LQKRVKELCQLWREKLRAETHKREAVH--KKWKQQEKILDDDVKALKTKVQKLQDERMRG 301

Query: 172 IDSFFEEKKKEI 183
           +      ++KE+
Sbjct: 302 V----AVREKEV 309


>gi|310790056|gb|EFQ25589.1| ribosomal recycling factor [Glomerella graminicola M1.001]
          Length = 297

 Score = 53.1 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 78/190 (41%), Gaps = 12/190 (6%)

Query: 3   QVIDLQNIKDRMGDTISFLKKDMMTLRTG-RVSPSMLDLVKVE-AYGSHV--PLNQVANV 58
             ++  ++  R+    +   + +  L++G R SP  +  + V+ +       PL ++A +
Sbjct: 109 DPLNFADVASRLASLAAHHTEVLKLLQSGDRFSPDAIGALTVQPSRKDPTTYPLRELAEI 168

Query: 59  TV-LEPRMLVVSVWDKEMVASVERGIHE-SNLGLNPIVEGQV---LRIPVPETTEERRLA 113
                 R + + + +K+ V  V   +    +    P  +      L + +  T ++    
Sbjct: 169 VPRPGGRTVSLLLHEKDYVKPVMAAVQASPDFNQQPQRDPDNELELVLKIEATNKDV--- 225

Query: 114 LVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
           +V+ A   A+  +  +R +         K +K      D+    + ++QK+ D  +K +D
Sbjct: 226 VVRRAKDAAQAWREKMRTVTEKRKKLHAKWQKDKAIVPDLKKRADKELQKLQDKEMKVVD 285

Query: 174 SFFEEKKKEI 183
           +  ++  K+I
Sbjct: 286 AAEQQAVKKI 295


>gi|169836592|ref|ZP_02869780.1| Ribosome Recycling Factor (RRF) [candidate division TM7
          single-cell isolate TM7a]
          Length = 38

 Score = 52.3 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 49 HVPLNQVANVTVLEPRMLVVSVWDKEMVASVER 81
            PLNQV  V+  E R+LV+  WDK ++  +E+
Sbjct: 1  PTPLNQVGTVSAPEARLLVIDPWDKSLIPVIEK 33


>gi|169827157|ref|YP_001697315.1| hypothetical protein Bsph_1587 [Lysinibacillus sphaericus C3-41]
 gi|168991645|gb|ACA39185.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 44

 Score = 51.9 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 26/44 (59%)

Query: 143 SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            +K  + +ED +    +DIQK+TD  I  +D   ++K+KEI+  
Sbjct: 1   MKKLAQITEDDLRGYGDDIQKLTDEFIVKVDQVTKDKEKEILEV 44


>gi|326433736|gb|EGD79306.1| hypothetical protein PTSG_09722 [Salpingoeca sp. ATCC 50818]
          Length = 76

 Score = 51.6 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 106 TTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKIT 165
            T E +  L K+A    EK K   RNIR   +  LKKS     A++D    +E  IQ+  
Sbjct: 1   MTTEYKSKLQKLAKDILEKYKHQARNIRNKYVAQLKKS----DATKDDKRHIETYIQQCM 56

Query: 166 DSTIKNIDSFFEEKKKEI 183
           D  ++ +D+ +E K K +
Sbjct: 57  DGHLRTMDAAYEAKHKAL 74


>gi|157872171|ref|XP_001684634.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68127704|emb|CAJ05884.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 211

 Score = 50.4 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 12/147 (8%)

Query: 38  LDLVKVEAYGSHVPL-NQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG 96
           L+L++VE  G H  L  +VA V       + ++        ++ + +   +  L    EG
Sbjct: 55  LELLEVEVAGGHTVLLVKVAQVVKTGTTTIEITPNSASFGNAILQRVSRFDSALQVSKEG 114

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
             +R+ +P  T  RR   V          +  V+  R   +  L+ +             
Sbjct: 115 TKIRVVIPPITTARRDRTVAEVSNLISTFRQRVKQSRTKAVKVLQDAGLDDGV------- 167

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEI 183
            + ++  + DST    ++F EEK  E+
Sbjct: 168 -QQELTALVDST---ANAFVEEKAAEL 190


>gi|281200592|gb|EFA74810.1| hypothetical protein PPL_11843 [Polysphondylium pallidum PN500]
          Length = 206

 Score = 48.9 bits (116), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 6   DLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHV 50
           DL  +K     T+ FL++    +R GR  P +LDL+ VE     +
Sbjct: 159 DLNTMKSSCDATVDFLRRGFGNIRCGRTGPELLDLITVETPNGPM 203


>gi|71408434|ref|XP_806621.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70870420|gb|EAN84770.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 281

 Score = 48.1 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 54/170 (31%), Gaps = 27/170 (15%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
            M   +  L+ D+                     G  V L +VA V       + +   +
Sbjct: 122 NMAKCLELLEADVGG-------------------GRKVLLTKVAQVVKTNNSTIEIVPQN 162

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
               + + + +   +  L    E Q +++ +P  T  RR   V+  H      K   +++
Sbjct: 163 ASFASPILQRVTRFDGTLQVTKEQQKIKVVMPPVTTARRDKAVQEIHQVISLFKQKTKHV 222

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQ----KITDSTIKNIDSFFEE 178
           R +    L+         E+ +  L   +       T+  +  ++    +
Sbjct: 223 RTNASKALQ----DASIEENALRELNAQLDTTVNAFTEEKVAELEQLAAD 268


>gi|322500990|emb|CBZ36067.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 211

 Score = 47.7 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 12/147 (8%)

Query: 38  LDLVKVEAYGSHVPL-NQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG 96
           L+L++VE  G H  L  +VA V       + ++        ++ + +   +  L    EG
Sbjct: 55  LELLEVEVAGGHTVLLVKVAQVVKTSTTTIEITPNSASFGNTILQRVSRFDSALQVSKEG 114

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
             +R+ +P  T  RR   V   +      +  V+  R   +  L+ +  +          
Sbjct: 115 TKIRVVIPPITTARRDKTVAEVNNLISTFRQRVKQSRTKAVKVLQDAGLADGV------- 167

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEI 183
            + ++  + DST    ++F EEK  E+
Sbjct: 168 -QQELTALVDST---ANAFVEEKAAEL 190


>gi|71400760|ref|XP_803153.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70865846|gb|EAN81707.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 281

 Score = 47.7 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 54/170 (31%), Gaps = 27/170 (15%)

Query: 13  RMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
            M   +  L+ D+                     G  V L +VA V       + +   +
Sbjct: 122 NMAKCLELLEADVGG-------------------GRKVLLTKVAQVVKTSNSTIEIVPQN 162

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
               + + + +   +  L    E Q +++ +P  T  RR   V+  H      K   +++
Sbjct: 163 ASFASPILQRVTRFDGTLQVTKEQQKIKVVMPPVTTARRDKAVQEIHQVISLFKQKTKHV 222

Query: 133 RRDGMDHLKKSRKSGKASEDMVASLENDIQ----KITDSTIKNIDSFFEE 178
           R +    L+         E+ +  L   +       T+  +  ++    +
Sbjct: 223 RTNASKALQ----DASIEENALRELNAQLDTAVNAFTEEKVAELEQLAAD 268


>gi|146093560|ref|XP_001466891.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134071255|emb|CAM69940.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 211

 Score = 47.7 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 12/147 (8%)

Query: 38  LDLVKVEAYGSHVPL-NQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG 96
           L+L++VE  G H  L  +VA V       + ++        ++ + +   +  L    EG
Sbjct: 55  LELLEVEVAGGHTVLLVKVAQVVKTGTTTIEITPNSASFGNTILQRVSRFDSALQVSKEG 114

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
             +R+ +P  T  RR   V   +      +  V+  R   +  L+ +  +          
Sbjct: 115 TKIRVVIPPITTARRDKTVAEVNNLISTFRQRVKQSRTKAVKVLQDAGLADGV------- 167

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEI 183
            + ++  + DST    ++F EEK  E+
Sbjct: 168 -QQELTALVDST---ANAFVEEKAAEL 190


>gi|261328700|emb|CBH11678.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 342

 Score = 46.9 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 16/156 (10%)

Query: 32  RVSPSM---------LDLVKVEAYGS-HVPLNQVANVTVLEPRMLVVSVWDKEMVASVER 81
           R + S          L+ + V+  G   V L +VA V       + V   +    + + +
Sbjct: 173 RANVSAMKVLNMAKCLEQLDVDVGGGRKVLLTKVAQVLKTGAATMEVVPQNVSFASPILQ 232

Query: 82  GIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLK 141
            +   +  L    E Q ++I +P  T  RR   V+         K  V+ +R      L+
Sbjct: 233 RVTRFDGTLQVSKEQQKIKITMPPITTARRQKAVEEIQLVVSSFKNKVKQVRTQASRALQ 292

Query: 142 KSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFE 177
                    E     L   + +   S ++  D   E
Sbjct: 293 ----ESGIDETASRELHQQLDECVHSFVE--DKVTE 322


>gi|72390025|ref|XP_845307.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62359269|gb|AAX79711.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70801842|gb|AAZ11748.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 342

 Score = 46.6 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 16/156 (10%)

Query: 32  RVSPSM---------LDLVKVEAYGS-HVPLNQVANVTVLEPRMLVVSVWDKEMVASVER 81
           R + S          L+ + V+  G   V L +VA V       + V   +    + + +
Sbjct: 173 RANVSAMKVLNMAKCLEQLDVDVGGGRKVLLTKVAQVLKTGAATMEVVPQNVSFASPILQ 232

Query: 82  GIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLK 141
            +   +  L    E Q ++I +P  T  RR   V+         K  V+ +R      L+
Sbjct: 233 RVTRFDGTLQVSKEQQKIKITMPPITTARRQKAVEEIQLVVSSFKNKVKQVRTQASRALQ 292

Query: 142 KSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFE 177
                    E     L   + +   S ++  D   E
Sbjct: 293 ----ESGIDETASRELHQQLDECVHSFVE--DKVTE 322


>gi|322493436|emb|CBZ28723.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 211

 Score = 45.8 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 60/147 (40%), Gaps = 12/147 (8%)

Query: 38  LDLVKVEAYGSHVPL-NQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG 96
           L+L++VE  G H+ L  +VA V       + ++       +S+ + +   +  L    EG
Sbjct: 55  LELLEVEVAGGHMVLLVKVAQVVKTGNTTIEITPNSASFGSSILQRVSRFDGTLQISKEG 114

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
             +R+ +P  T  RR   V          +  V++ +   +  L+ +             
Sbjct: 115 TKIRVVIPPITTARRDKTVAEVSNLISTFRQRVKHSKTKAVKVLQDAGLDDGV------- 167

Query: 157 LENDIQKITDSTIKNIDSFFEEKKKEI 183
            + ++  + DST    ++F EEK  E+
Sbjct: 168 -QQELTALVDST---ANAFVEEKVAEL 190


>gi|217070266|gb|ACJ83493.1| unknown [Medicago truncatula]
          Length = 48

 Score = 45.4 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 137 MDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           MD +KK   +    +D +  LE ++  +T   IK  +   + K+KEI
Sbjct: 1   MDAIKKL--NSILPKDDLKRLEKEVDDLTKKFIKTAEDVCKAKEKEI 45


>gi|325278091|ref|ZP_08143608.1| ribosome recycling factor [Pseudomonas sp. TJI-51]
 gi|324096778|gb|EGB95107.1| ribosome recycling factor [Pseudomonas sp. TJI-51]
          Length = 33

 Score = 44.6 bits (105), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 154 VASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
                +DIQK+TD  +  +D+ F+ K+K++M  
Sbjct: 1   ERRAADDIQKLTDKFVAEVDAAFKAKEKDLMAV 33


>gi|116334924|ref|YP_802419.1| hypothetical protein CRP_022 [Candidatus Carsonella ruddii PV]
 gi|116235205|dbj|BAF35053.1| hypothetical protein [Candidatus Carsonella ruddii PV]
          Length = 176

 Score = 44.6 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 59/128 (46%), Gaps = 4/128 (3%)

Query: 34  SPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPI 93
           +  + + +K++   S++ L ++ ++  ++ +  +    D++++  + +  +  N G N +
Sbjct: 28  NIEIFNNLKIKYNNSYINLRELCSIKNIDKKKFLFIFNDQKILLYLIKSKYFENFGFNIL 87

Query: 94  VEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDM 153
            +   + + VP  + E R+  +K+     E     + ++R+  + H+K        S+D 
Sbjct: 88  KKKTTIELLVPNISREFRINFLKIIKQEYEYFIEILESLRKKELLHIKIQ----NISKDE 143

Query: 154 VASLENDI 161
           +   E  I
Sbjct: 144 ILRQEKVI 151


>gi|322823625|gb|EFZ29338.1| hypothetical protein TCSYLVIO_4407 [Trypanosoma cruzi]
          Length = 209

 Score = 43.9 bits (103), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 8/136 (5%)

Query: 47  GSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPET 106
           G  V L +VA V       + +   +    + + + +   +  L    E Q +++ +P  
Sbjct: 65  GRKVLLTKVAQVVKTNNTTIEIVPQNASFASPILQRVTRFDGTLQVTKEQQKIKVVMPPV 124

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ---- 162
           T  RR   V+  +      K   +++R +    L+         E+ +  L   +     
Sbjct: 125 TTARRDKAVQEINQVISLFKQKTKHVRTNASKALQ----DASIEENALRELNAQLDTTVN 180

Query: 163 KITDSTIKNIDSFFEE 178
             T+  +  ++    +
Sbjct: 181 AFTEEKVAELEQLAAD 196


>gi|169837887|ref|ZP_02871075.1| hypothetical protein cdivTM_12469 [candidate division TM7
           single-cell isolate TM7a]
          Length = 44

 Score = 43.9 bits (103), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 60  VLEPRMLVVSVWDKEMVASVERGIHESN-LGLNPIVEGQVLRIP 102
             E +M      D   +A++E  I  +  LG NP  +G+V+RIP
Sbjct: 1   APEAQMSTCHSVDPSNIAAIEASIRANEALGFNPSDDGRVVRIP 44


>gi|154341467|ref|XP_001566685.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064010|emb|CAM40201.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 211

 Score = 43.9 bits (103), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 1/107 (0%)

Query: 38  LDLVKVEAYGSHVPL-NQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG 96
           L+L++VE  G H  L  +V+ V       + ++        S+ + +   +  L    EG
Sbjct: 55  LELLEVEMAGGHTVLLIKVSQVVKTGNMTIEITPNSASFGNSILQRVSRFDSALQVSKEG 114

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKS 143
             +R+ +P  T  RR   V+         +  V+  R   +  L+ +
Sbjct: 115 PKIRVVLPPITTARRDRTVEEVKNLISIFRQLVKQSRTKAVKVLQDA 161


>gi|296482311|gb|DAA24426.1| ribosome-recycling factor, mitochondrial precursor [Bos taurus]
          Length = 113

 Score = 43.5 bits (102), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 15/34 (44%)

Query: 2   NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSP 35
             +I+L+ + + M   I  LK +       R SP
Sbjct: 80  EDIINLEEVDEEMKSVIEALKDNFNKTVNIRTSP 113


>gi|124505541|ref|XP_001351512.1| ribosome recycling factor, putative [Plasmodium falciparum 3D7]
 gi|23498271|emb|CAD49242.1| ribosome recycling factor, putative [Plasmodium falciparum 3D7]
          Length = 266

 Score = 43.5 bits (102), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 56/147 (38%), Gaps = 14/147 (9%)

Query: 38  LDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNL-----GLNP 92
            + + +     ++ L  VA V +    ++    +    +  +++ IH   L         
Sbjct: 123 FNNISILKDKKNIKLCDVAQVVIKSSNLIYFYPY---TINDIQKIIHNLKLKDNTWNPTV 179

Query: 93  IVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASED 152
             +GQ + + +   +E+ ++   K A    EK K  +RN+R    D +           D
Sbjct: 180 SNDGQYVILQIQPLSEDVKMKKKKEAKDLFEKIKNDIRNVRYKIRDDI-----IKNIEGD 234

Query: 153 MVASLE-NDIQKITDSTIKNIDSFFEE 178
               +E N +       +K I++ +E+
Sbjct: 235 QWKIVERNKLDNYIKDKMKLIENVYEQ 261


>gi|47188071|emb|CAG14867.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 41

 Score = 41.9 bits (98), Expect = 0.038,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 20/35 (57%)

Query: 36 SMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSV 70
            LD + V       PLNQ+  +++  P++++V++
Sbjct: 1  GALDHIVVTTGDGKFPLNQLGQISMKSPQLIIVNM 35


>gi|326671216|ref|XP_003199385.1| PREDICTED: c-type lectin domain family 4 member M-like [Danio
           rerio]
          Length = 450

 Score = 41.9 bits (98), Expect = 0.043,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 13/180 (7%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVS-----PSMLDLVKVEAYGSHVPLNQV 55
           +N++ +L   K +M + I+ L ++   +     +       ML+ +          LN++
Sbjct: 126 LNKITNLTEEKSKMLNKITNLTEEKSKILNKITNLTEEKSKMLNKITNLTEEKSKMLNKI 185

Query: 56  ANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALV 115
            N+T  + +ML       ++    E      N   N   E   +   +   TEE+   L 
Sbjct: 186 TNLTEEKSKMLN------KITNLTEEKSKMLNKNTNLTEEKSKILNKITNLTEEKSKMLN 239

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           K+ +   EKSKI +  I     +  K   K    +E   + + N I  +T+   K ++  
Sbjct: 240 KITNLTEEKSKI-LNKITNLTEEKNKMLNKITNLTE-EKSKMLNKITNLTEEKSKMLNKI 297


>gi|70927050|ref|XP_735968.1| ribosome recycling factor [Plasmodium chabaudi chabaudi]
 gi|56510105|emb|CAH76160.1| ribosome recycling factor, putative [Plasmodium chabaudi chabaudi]
          Length = 114

 Score = 41.5 bits (97), Expect = 0.047,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 11/117 (9%)

Query: 71  WDKEMVASVERGIHESNL-----GLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
           +   +++ +++ IH   +           +GQ + + +P  T E +L   K A    EK 
Sbjct: 1   FYPYIISDIQKIIHTLKVKDNTWNPTTSNDGQCILLQIPPLTNEVKLKKKKEAKDLLEKV 60

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLE-NDIQKITDSTIKNIDSFFEEKKK 181
           K  +RNIR    D +           D     E N +     + +KNI++ +E+  K
Sbjct: 61  KNDIRNIRHKIRDFI-----GKNIEGDEWKIEERNKLDNYIKNKVKNIENVYEKYTK 112


>gi|123475253|ref|XP_001320805.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121903618|gb|EAY08582.1| hypothetical protein TVAG_191050 [Trichomonas vaginalis G3]
          Length = 565

 Score = 41.2 bits (96), Expect = 0.061,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 11/77 (14%)

Query: 113 ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
            +VK A A  EK  + ++N      + L K+ K+ + + D +   +   Q   D  I+  
Sbjct: 395 DVVKDAKAELEKITV-IKN----YKEMLSKNEKTNQLTNDEIKKRQTQ-QDGHDKRIEK- 447

Query: 173 DSF----FEEKKKEIMH 185
           D      F+ ++KEI+ 
Sbjct: 448 DKIRVVDFKSREKEILE 464


>gi|145518922|ref|XP_001445333.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412777|emb|CAK77936.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1814

 Score = 41.2 bits (96), Expect = 0.065,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 10/86 (11%)

Query: 110  RRLALVKVAHAYAEKSKISVRNI-------RRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
             RL   K     AE ++   R I        +   + L++     K  ED    LE + Q
Sbjct: 1513 MRLERTKEEQRQAELAEQEERRIAELKRIEEQLQAEKLRQEELKLKQQEDDQRRLEEEQQ 1572

Query: 163  KITDSTIKNI---DSFFEEKKKEIMH 185
            K  +  IK +        +K++E++ 
Sbjct: 1573 KKREDEIKQLLEEQQLQAQKEQELLQ 1598


>gi|213023708|ref|ZP_03338155.1| ribosome recycling factor [Salmonella enterica subsp. enterica
          serovar Typhi str. 404ty]
          Length = 34

 Score = 41.2 bits (96), Expect = 0.073,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 8  QNIKDRMGDTISFLKKDMMTLRTGRVSP 35
          ++ + RM   +   K  +  +RTGR SP
Sbjct: 7  KDAEVRMEKCVEAFKTQISKVRTGRASP 34


>gi|238029025|ref|YP_002913250.1| Rhs family protein [Burkholderia glumae BGR1]
 gi|237880602|gb|ACR32930.1| Rhs family protein [Burkholderia glumae BGR1]
          Length = 1548

 Score = 40.8 bits (95), Expect = 0.081,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 17/115 (14%)

Query: 33  VSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN----- 87
            +   LD   V+  G  + L++V  +    P +  +     +++A +   I   +     
Sbjct: 29  ANLKALDRWLVDVSGGVLTLDRVETIARNAPVLANI-FAAVDLIADIRAMIDHGDRPIDL 87

Query: 88  ----------LGLNPIVEGQ-VLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
                     +G+ PI  G   +R+      +  R  + K   A  E +   VR+
Sbjct: 88  FDWVNLGLDLIGVIPIPMGTAQIRMGARPMLKLLREEIAKNGKAMGEAAMQMVRD 142


>gi|238023441|ref|YP_002907674.1| Rhs family protein [Burkholderia glumae BGR1]
 gi|237880494|gb|ACR32823.1| Rhs family protein [Burkholderia glumae BGR1]
          Length = 1548

 Score = 40.8 bits (95), Expect = 0.081,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 17/115 (14%)

Query: 33  VSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN----- 87
            +   LD   V+  G  + L++V  +    P +  +     +++A +   I   +     
Sbjct: 29  ANLKALDRWLVDVSGGVLTLDRVETIARNAPVLANI-FAAVDLIADIRAMIDHGDRPIDL 87

Query: 88  ----------LGLNPIVEGQ-VLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
                     +G+ PI  G   +R+      +  R  + K   A  E +   VR+
Sbjct: 88  FDWVNLGLDLIGVIPIPMGTAQIRMGARPMLKLLREEIAKNGKAMGEAAMQMVRD 142


>gi|238024689|ref|YP_002908921.1| Rhs family protein [Burkholderia glumae BGR1]
 gi|237879354|gb|ACR31686.1| Rhs family protein [Burkholderia glumae BGR1]
          Length = 1560

 Score = 40.8 bits (95), Expect = 0.081,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 17/115 (14%)

Query: 33  VSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESN----- 87
            +   LD   V+  G  + L++V  +    P +  +     +++A +   I   +     
Sbjct: 29  ANLKALDRWLVDVSGGVLTLDRVETIARNAPVLANI-FAAVDLIADIRAMIDHGDRPIDL 87

Query: 88  ----------LGLNPIVEGQ-VLRIPVPETTEERRLALVKVAHAYAEKSKISVRN 131
                     +G+ PI  G   +R+      +  R  + K   A  E +   VR+
Sbjct: 88  FDWVNLGLDLIGVIPIPMGTAQIRMGARPMLKLLREEIAKNGKAMGEAAMQMVRD 142


>gi|112253526|gb|ABI14350.1| unknown [Pfiesteria piscicida]
          Length = 659

 Score = 40.4 bits (94), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 5/69 (7%)

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
            A VK A A  EK+K  V          +K++    + +E  V   E  ++K   + IK 
Sbjct: 65  EAKVKEAKAEVEKAKAEV----EKAKAEIKEAEAKVEKAEVKVKEAEAKVEK-AKAEIKE 119

Query: 172 IDSFFEEKK 180
            ++  E+ +
Sbjct: 120 AEAKVEKAE 128


>gi|258645936|ref|ZP_05733405.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Dialister invisus
           DSM 15470]
 gi|260403305|gb|EEW96852.1| 1-acyl-sn-glycerol-3-phosphate acyltransferase [Dialister invisus
           DSM 15470]
          Length = 206

 Score = 40.0 bits (93), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 21/35 (60%)

Query: 139 HLKKSRKSGKASEDMVASLENDIQKITDSTIKNID 173
            +KK R   +A E +   ++ +IQK+TD  ++ I+
Sbjct: 170 EVKKQRADDEAVEALNKKVKEEIQKLTDEYMEKIN 204


>gi|114565586|ref|YP_752740.1| Serine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122319230|sp|Q0B0Y5|SYS_SYNWW RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|114336521|gb|ABI67369.1| seryl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 427

 Score = 40.0 bits (93), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 14/82 (17%)

Query: 102 PVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
           P     EERR  LV+V     E+ K    N R +    + K +K G    D++  +    
Sbjct: 29  PFLALDEERRKILVQV-----EERK----NFRNNSSQQIGKMKKEGLNPADLMEEVRQAG 79

Query: 162 QKITDSTIKNIDSFFEEKKKEI 183
           Q+     IK +D      +KEI
Sbjct: 80  QQ-----IKELDEELARVEKEI 96


>gi|148673197|gb|EDL05144.1| leucine rich repeat and coiled-coil domain containing 1, isoform
           CRA_c [Mus musculus]
          Length = 994

 Score = 40.0 bits (93), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 108 EERRLALVKVAHAYAEKSK------ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
           EE R A   +   + +K +      + V+ ++    D  +K +     S ++       +
Sbjct: 880 EEIRKAYSTLNKKWHDKGELLSHLEMQVKEVKEKFEDKERKLKAERDKSLELQKDAMEKL 939

Query: 162 QKITDSTIKNIDSFFEEKKKEIMHF 186
           Q + D+  + +D   E  + EIM  
Sbjct: 940 QNMDDAFRRQVDEIVEAHQAEIMQL 964


>gi|242071431|ref|XP_002450992.1| hypothetical protein SORBIDRAFT_05g022270 [Sorghum bicolor]
 gi|241936835|gb|EES09980.1| hypothetical protein SORBIDRAFT_05g022270 [Sorghum bicolor]
          Length = 918

 Score = 40.0 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 13/90 (14%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLE---NDIQK 163
            EER   L++ A   AE+    ++N  +   D  K+  K  +  +D   S +    +I  
Sbjct: 675 DEERLTQLLEKAKNKAEE---LIKNDEKTAADVAKEEEKKKQMVKDFSNSAQAVIKEIDD 731

Query: 164 ITDSTIKN-------IDSFFEEKKKEIMHF 186
                +K        ++      +KE++  
Sbjct: 732 QLKEEVKKQQQLTDLVERSLITNEKELLMI 761


>gi|38173988|gb|AAH61202.1| Lrrcc1 protein [Mus musculus]
          Length = 996

 Score = 39.6 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 108 EERRLALVKVAHAYAEKSK------ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
           EE R A   +   + +K +      + V+ ++    D  +K +     S ++       +
Sbjct: 872 EEIRKAYSTLNKKWHDKGELLSHLEMQVKEVKEKFEDKERKLKAERDKSLELQKDAMEKL 931

Query: 162 QKITDSTIKNIDSFFEEKKKEIMHF 186
           Q + D+  + +D   E  + EIM  
Sbjct: 932 QNMDDAFRRQVDEIVEAHQAEIMQL 956


>gi|290378|gb|AAA71995.1| ORF2 [Desulfovibrio vulgaris str. Hildenborough]
          Length = 370

 Score = 39.6 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 9/97 (9%)

Query: 88  LGLNPIVEG--QVLRIPVPETTEERRLALVKVAHAY-AEKSKISVRNIRRDGMDHLKKSR 144
           LG  P+V G   +L       T+  R    K+A    AE  K +V   R +  D LK + 
Sbjct: 264 LGAVPMVVGIWPILLTGAYAITK--RKE--KIAAEEQAEAVKQAVAASRAEADDKLKAAL 319

Query: 145 KSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
                 +D  A++  +++K  D   K  +     K++
Sbjct: 320 AKAD--KDKEAAVTREVKKAVDEARKTFEEELAAKEQ 354


>gi|254675306|ref|NP_083191.2| leucine-rich repeat and coiled-coil domain-containing protein 1
           isoform 3 [Mus musculus]
 gi|148673196|gb|EDL05143.1| leucine rich repeat and coiled-coil domain containing 1, isoform
           CRA_b [Mus musculus]
 gi|187952985|gb|AAI38735.1| Leucine rich repeat and coiled-coil domain containing 1 [Mus
           musculus]
 gi|223461066|gb|AAI38736.1| Leucine rich repeat and coiled-coil domain containing 1 [Mus
           musculus]
          Length = 993

 Score = 39.6 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 108 EERRLALVKVAHAYAEKSK------ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
           EE R A   +   + +K +      + V+ ++    D  +K +     S ++       +
Sbjct: 888 EEIRKAYSTLNKKWHDKGELLSHLEMQVKEVKEKFEDKERKLKAERDKSLELQKDAMEKL 947

Query: 162 QKITDSTIKNIDSFFEEKKKEIMHF 186
           Q + D+  + +D   E  + EIM  
Sbjct: 948 QNMDDAFRRQVDEIVEAHQAEIMQL 972


>gi|12835963|dbj|BAB23437.1| unnamed protein product [Mus musculus]
          Length = 993

 Score = 39.6 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 108 EERRLALVKVAHAYAEKSK------ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
           EE R A   +   + +K +      + V+ ++    D  +K +     S ++       +
Sbjct: 888 EEIRKAYSTLNKKWHDKGELLSHLEMQVKEVKEKFEDKERKLKAERDKSLELQKDAMEKL 947

Query: 162 QKITDSTIKNIDSFFEEKKKEIMHF 186
           Q + D+  + +D   E  + EIM  
Sbjct: 948 QNMDDAFRRQVDEIVEAHQAEIMQL 972


>gi|120603449|ref|YP_967849.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
           [Desulfovibrio vulgaris DP4]
 gi|120563678|gb|ABM29422.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein
           [Desulfovibrio vulgaris DP4]
          Length = 370

 Score = 39.6 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 9/97 (9%)

Query: 88  LGLNPIVEG--QVLRIPVPETTEERRLALVKVAHAY-AEKSKISVRNIRRDGMDHLKKSR 144
           LG  P+V G   +L       T+  R    K+A    AE  K +V   R +  D LK + 
Sbjct: 264 LGAVPMVVGIWPILLTGAYAITK--RKE--KIAAEEQAEAVKQAVAASRAEADDKLKAAL 319

Query: 145 KSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
                 +D  A++  +++K  D   K  +     K++
Sbjct: 320 AKAD--KDKEAAVTREVKKAVDEARKTFEEELAAKEQ 354


>gi|46578950|ref|YP_009758.1| hmc operon protein 2 [Desulfovibrio vulgaris str. Hildenborough]
 gi|47606726|sp|P33389|HMC2_DESVH RecName: Full=Protein DVU_0535; AltName: Full=HMC operon ORF 2
 gi|46448363|gb|AAS95017.1| hmc operon protein 2 [Desulfovibrio vulgaris str. Hildenborough]
 gi|311232808|gb|ADP85662.1| hypothetical protein Deval_0493 [Desulfovibrio vulgaris RCH1]
          Length = 370

 Score = 39.6 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 9/97 (9%)

Query: 88  LGLNPIVEG--QVLRIPVPETTEERRLALVKVAHAY-AEKSKISVRNIRRDGMDHLKKSR 144
           LG  P+V G   +L       T+  R    K+A    AE  K +V   R +  D LK + 
Sbjct: 264 LGAVPMVVGIWPILLTGAYAITK--RKE--KIAAEEQAEAVKQAVAASRAEADDKLKAAL 319

Query: 145 KSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
                 +D  A++  +++K  D   K  +     K++
Sbjct: 320 AKAD--KDKEAAVTREVKKAVDEARKTFEEELAAKEQ 354


>gi|91084119|ref|XP_969552.1| PREDICTED: similar to laminin alpha-1, 2 chain [Tribolium castaneum]
 gi|270008021|gb|EFA04469.1| hypothetical protein TcasGA2_TC014773 [Tribolium castaneum]
          Length = 3160

 Score = 39.6 bits (92), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 74/185 (40%), Gaps = 24/185 (12%)

Query: 4    VIDLQNIKDRMGDT---ISFLKKDMMTLRTGRVSPSM---LDLVKVEAYGSHVPLNQVAN 57
            +++L+N+ D    T   +  LK+D+  L  G+ +  +   L  ++ +       ++++  
Sbjct: 2108 ILNLKNLSDEFAKTSELLEDLKRDI--LFNGKNNNELNAFLRDIQKDIRNQSDVISKLKK 2165

Query: 58   VTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEG---QVLRIPVPETTEERRLAL 114
             +  + R +        M+AS+E+ + ++N+ L   +       L +       +     
Sbjct: 2166 -SKNDARNVS------SMIASIEQRVKDTNISLQYELTKSYYNYLNLTSARDIAKLMER- 2217

Query: 115  VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDM-VASLENDIQKITDSTIKNID 173
            VK      E   +S+ N      D  K    +   S D  +  ++  I+++T   I++ +
Sbjct: 2218 VKKTRKELENINVSLNNT---ATDQAKDLNANKFKSTDNNLKMIQEQIEQLTKK-IRDAN 2273

Query: 174  SFFEE 178
               E 
Sbjct: 2274 ERVES 2278


>gi|50511097|dbj|BAD32534.1| mKIAA1764 protein [Mus musculus]
          Length = 1034

 Score = 39.6 bits (92), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 108 EERRLALVKVAHAYAEKSK------ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
           EE R A   +   + +K +      + V+ ++    D  +K +     S ++       +
Sbjct: 896 EEIRKAYSTLNKKWHDKGELLSHLEMQVKEVKEKFEDKERKLKAERDKSLELQKDAMEKL 955

Query: 162 QKITDSTIKNIDSFFEEKKKEIMHF 186
           Q + D+  + +D   E  + EIM  
Sbjct: 956 QNMDDAFRRQVDEIVEAHQAEIMQL 980


>gi|254675310|ref|NP_001157052.1| leucine-rich repeat and coiled-coil domain-containing protein 1
           isoform 2 [Mus musculus]
          Length = 1010

 Score = 39.2 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 108 EERRLALVKVAHAYAEKSK------ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
           EE R A   +   + +K +      + V+ ++    D  +K +     S ++       +
Sbjct: 872 EEIRKAYSTLNKKWHDKGELLSHLEMQVKEVKEKFEDKERKLKAERDKSLELQKDAMEKL 931

Query: 162 QKITDSTIKNIDSFFEEKKKEIMHF 186
           Q + D+  + +D   E  + EIM  
Sbjct: 932 QNMDDAFRRQVDEIVEAHQAEIMQL 956


>gi|66390999|dbj|BAD98748.1| staphylocoagulase [Staphylococcus aureus]
          Length = 662

 Score = 39.2 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 11/75 (14%)

Query: 102 PVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
            V   T E    + K      E+ + +VR ++       +K  K    SED       ++
Sbjct: 134 SVYNLTMEEYNEISKSLKDAEEEFRKNVREVQ-------EKEVKLKTYSEDEEEKATKEV 186

Query: 162 QKITDSTIKNIDSFF 176
             +    +  +D+ +
Sbjct: 187 YDL----VAEVDTIY 197


>gi|123601|sp|P26413|HSP70_SOYBN RecName: Full=Heat shock 70 kDa protein
 gi|18663|emb|CAA44620.1| Heat Shock 70kD protein [Glycine max]
          Length = 645

 Score = 39.2 bits (91), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 14/92 (15%)

Query: 105 ETTEERRLALVKVAHAY-AE--------KSKISVRNIRRDGMDHLKKSRKSGKASEDMV- 154
             ++E    +VK A  Y AE        ++K S+ N   +  + +K  +  GK S D   
Sbjct: 514 RLSKEEIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQ 573

Query: 155 ---ASLENDIQKITDSTIKNIDSFFEEKKKEI 183
               ++E+ IQ +  + +  +D  FE+K+KE+
Sbjct: 574 KIEKAVEDAIQWLEGNQMAEVDE-FEDKQKEL 604


>gi|189028878|sp|Q69ZB0|LRCC1_MOUSE RecName: Full=Leucine-rich repeat and coiled-coil domain-containing
           protein 1
          Length = 1026

 Score = 39.2 bits (91), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 108 EERRLALVKVAHAYAEKSK------ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
           EE R A   +   + +K +      + V+ ++    D  +K +     S ++       +
Sbjct: 888 EEIRKAYSTLNKKWHDKGELLSHLEMQVKEVKEKFEDKERKLKAERDKSLELQKDAMEKL 947

Query: 162 QKITDSTIKNIDSFFEEKKKEIMHF 186
           Q + D+  + +D   E  + EIM  
Sbjct: 948 QNMDDAFRRQVDEIVEAHQAEIMQL 972


>gi|254675308|ref|NP_001157051.1| leucine-rich repeat and coiled-coil domain-containing protein 1
           isoform 1 [Mus musculus]
 gi|148673195|gb|EDL05142.1| leucine rich repeat and coiled-coil domain containing 1, isoform
           CRA_a [Mus musculus]
          Length = 1026

 Score = 39.2 bits (91), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 108 EERRLALVKVAHAYAEKSK------ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
           EE R A   +   + +K +      + V+ ++    D  +K +     S ++       +
Sbjct: 888 EEIRKAYSTLNKKWHDKGELLSHLEMQVKEVKEKFEDKERKLKAERDKSLELQKDAMEKL 947

Query: 162 QKITDSTIKNIDSFFEEKKKEIMHF 186
           Q + D+  + +D   E  + EIM  
Sbjct: 948 QNMDDAFRRQVDEIVEAHQAEIMQL 972


>gi|710400|gb|AAA86507.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana]
          Length = 389

 Score = 39.2 bits (91), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 125 SKISVRNIR--RDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDS 174
           ++  +  +R  RD ++ +KK   S    +E  +  +E +I+K  D  I     
Sbjct: 302 TRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKD 354


>gi|15218940|ref|NP_176198.1| AT-E1 ALPHA; oxidoreductase, acting on the aldehyde or oxo group of
           donors, disulfide as acceptor / pyruvate dehydrogenase
           (acetyl-transferring) [Arabidopsis thaliana]
 gi|27735220|sp|P52901|ODPA1_ARATH RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha-1,
           mitochondrial; Short=PDHE1-A; Flags: Precursor
 gi|5080822|gb|AAD39331.1|AC007258_20 pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana]
 gi|21593256|gb|AAM65205.1| pyruvate dehydrogenase e1 alpha subunit, putative [Arabidopsis
           thaliana]
 gi|24030439|gb|AAN41374.1| putative pyruvate dehydrogenase e1 alpha subunit [Arabidopsis
           thaliana]
 gi|332195517|gb|AEE33638.1| pyruvate dehydrogenase complex E1 alpha subunit [Arabidopsis
           thaliana]
          Length = 389

 Score = 39.2 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 125 SKISVRNIR--RDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDS 174
           ++  +  +R  RD ++ +KK   S    +E  +  +E +I+K  D  I     
Sbjct: 302 TRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKD 354


>gi|297840565|ref|XP_002888164.1| AT-E1 alpha [Arabidopsis lyrata subsp. lyrata]
 gi|297334005|gb|EFH64423.1| AT-E1 alpha [Arabidopsis lyrata subsp. lyrata]
          Length = 389

 Score = 39.2 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 125 SKISVRNIR--RDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDS 174
           ++  +  +R  RD ++ +KK   S    +E  +  +E +I+K  D  I     
Sbjct: 302 TRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKD 354


>gi|13430788|gb|AAK26016.1|AF360306_1 putative pyruvate dehydrogenase e1 alpha subunit [Arabidopsis
           thaliana]
          Length = 389

 Score = 39.2 bits (91), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 125 SKISVRNIR--RDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDS 174
           ++  +  +R  RD ++ +KK   S    +E  +  +E +I+K  D  I     
Sbjct: 302 TRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKD 354


>gi|157849684|gb|ABV89625.1| pyruvate dehydrogenase complex E1 alpha subunit dehydrogenase
           [Brassica rapa]
          Length = 389

 Score = 38.9 bits (90), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 125 SKISVRNIR--RDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDS 174
           ++  +  +R  RD ++ +KK   S    +E  +  +E +I+K  D  I     
Sbjct: 302 TRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKD 354


>gi|92112743|ref|YP_572671.1| pilus assembly protein, PilO [Chromohalobacter salexigens DSM 3043]
 gi|91795833|gb|ABE57972.1| Pilus assembly protein, PilO [Chromohalobacter salexigens DSM 3043]
          Length = 216

 Score = 38.9 bits (90), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 22/128 (17%)

Query: 7   LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +  +  RM   +  L  D   +      P++LD +  +A   H  +     +    P+  
Sbjct: 89  MAELDARMQALLEMLPSD-AEI------PALLDDIS-DAAQDHQLVIDSIRLRAPVPQTF 140

Query: 67  VV-SVWDK-------------EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRL 112
            +   +D                VA++ R +   +  L P+ EG  LR+ +   T   R 
Sbjct: 141 YIEQPFDIEVRGGYHEIAAFLGSVAALPRIVTLHDFTLTPVNEGDTLRLSLLARTYSYRE 200

Query: 113 ALVKVAHA 120
                A A
Sbjct: 201 DADPKARA 208


>gi|258565735|ref|XP_002583612.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237907313|gb|EEP81714.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 771

 Score = 38.9 bits (90), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 8/60 (13%)

Query: 103 VPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
            PE +   R  L     A  E+     R +R+      +K+ +  + +E+   SLE  +Q
Sbjct: 2   APELSTLSREEL---LRALEEQ-----RRLRQQAEADKEKAERDKEKAEEDKKSLEKQLQ 53


>gi|158423261|ref|YP_001524553.1| ABC transporter substrate binding protein [Azorhizobium caulinodans
           ORS 571]
 gi|158330150|dbj|BAF87635.1| ABC transporter substrate binding protein [Azorhizobium caulinodans
           ORS 571]
          Length = 353

 Score = 38.9 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 28/149 (18%)

Query: 1   MNQVIDLQN-IKDRMGDTISFLKKDMMTLRTGRVSPSMLD--------LVKVEAYGSHVP 51
           M ++  L    +  M      +K+ +  L     +P  L          + V    + +P
Sbjct: 184 MVEIAKLNGGSESNMEPAFEAVKRLLPNLGAVAANPGALATLFQQGQIDISVNYLNAVLP 243

Query: 52  LNQVA---NVTVLEPRMLVVSVWDKEMVASVERGIHESNLG---LNPIVEGQV-LRIPVP 104
           L Q      +   +   ++V    +  + ++       +L    +N  + G+V  R+   
Sbjct: 244 LAQNGVEIAIARPDSGWVLV----RNSLHAIANA-KNLDLAYAYINAALSGEVQARMAAA 298

Query: 105 ET-------TEERRLALVKVAHAYAEKSK 126
                    T      L KVA + AE SK
Sbjct: 299 PNFLLPTNRTVAFSSELQKVAKSEAELSK 327


>gi|156547421|ref|XP_001604560.1| PREDICTED: similar to laminin gamma 1 chain [Nasonia vitripennis]
          Length = 1617

 Score = 38.5 bits (89), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 9/79 (11%)

Query: 101  IPVPETT----EERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVAS 156
            I +PE      + R   + K A    +++KI +     + +D +       + SED++  
Sbjct: 1281 ISLPEVNLTDLQNRVEEVNKEAAKIKDQAKILL----DENIDLIHDIEDKVRKSEDLLYK 1336

Query: 157  LENDIQKITDSTIKNIDSF 175
             E+  Q IT   +  +D  
Sbjct: 1337 AEDQ-QTITAELLAEVDDA 1354


>gi|313218077|emb|CBY41402.1| unnamed protein product [Oikopleura dioica]
          Length = 233

 Score = 38.5 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 57/155 (36%), Gaps = 12/155 (7%)

Query: 40  LVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVL 99
            + V   G    L  +A +      +        E+V  + +   ++NL      + +V+
Sbjct: 70  QLSVLYDGDVFCLEDLATLAASRSIVKASVAGCPELVQPISQACQKANL--IATSQNEVI 127

Query: 100 RIPVPETTEERRLALVKVAHAYAEKSKISVRNIRR-DGMDHLKKSRKSGKASEDMVASLE 158
            I +P TT   R  LVK      +     +  ++    +  ++ +  S + S+D+     
Sbjct: 128 TIKIPPTTAASRKKLVKNVDQIEKSFSQKMNKLQTSQYLKAMEAAESSSQYSQDLEEEWA 187

Query: 159 ND---------IQKITDSTIKNIDSFFEEKKKEIM 184
                      ++K+ +S    I    E K+ E++
Sbjct: 188 AKSLAAHVILTLEKMMESAEAEISKNAEAKRHELL 222


>gi|195995537|ref|XP_002107637.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens]
 gi|190588413|gb|EDV28435.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens]
          Length = 7662

 Score = 38.5 bits (89), Expect = 0.49,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 58/146 (39%), Gaps = 33/146 (22%)

Query: 48   SHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETT 107
            + + LN V   T ++ ++  V   DK+++  +E  + E +L          +++ +    
Sbjct: 6900 AMIELNNVETATAVK-KITAVKP-DKKVI-EIEAELKEKHLE-------DQIKLRL---- 6945

Query: 108  EERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV---ASLE------ 158
             E R  + ++     E+        +   ++ + +   +    ED+     + E      
Sbjct: 6946 -EHREEMAEIERQAQEE--------QNKALEEIVEGMAAKLEEEDVEFQKKAAEAKEKLS 6996

Query: 159  -NDIQKITDSTIKNIDSFFEEKKKEI 183
              + QK+ D   K ++S  + ++ EI
Sbjct: 6997 AEEFQKMLDDHEKELESMQQNQEIEI 7022


>gi|118473989|ref|YP_884615.1| hypothetical protein MSMEG_0200 [Mycobacterium smegmatis str. MC2
           155]
 gi|118175276|gb|ABK76172.1| hypothetical protein MSMEG_0200 [Mycobacterium smegmatis str. MC2
           155]
          Length = 850

 Score = 38.1 bits (88), Expect = 0.51,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 12/86 (13%)

Query: 102 PVPETTEERRLALVKVAHAYAE-----KSKISVRNIRRDGMDHLKK-SRKSGKASEDMVA 155
            VPE T++    + KV     E     ++K+      +   +  K  + K+ + ++  V 
Sbjct: 734 TVPEPTKKVGGEVKKVVADIDEARAEIEAKV------KKANERAKASAEKARERTQKAVK 787

Query: 156 SLENDIQKITDSTIKNIDSFFEEKKK 181
             ++ + KI D+  K I +  +  +K
Sbjct: 788 DAQDRVNKIADNGRKQIKAVADGVEK 813


>gi|241889237|ref|ZP_04776540.1| putative maebl [Gemella haemolysans ATCC 10379]
 gi|241864074|gb|EER68453.1| putative maebl [Gemella haemolysans ATCC 10379]
          Length = 1081

 Score = 38.1 bits (88), Expect = 0.52,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 7/52 (13%)

Query: 138 DHLKKSRKSGKASED-------MVASLENDIQKITDSTIKNIDSFFEEKKKE 182
             +K   K+ + ++D             +++ K+TD   K ++     K+KE
Sbjct: 346 KAVKDIEKAKETAQDAFDKAASDTKLYADELNKLTDEYNKTLEEVKAAKEKE 397


>gi|86565236|ref|NP_510801.2| hypothetical protein Y40C7B.1 [Caenorhabditis elegans]
 gi|68159249|gb|AAF60541.2| Hypothetical protein Y40C7B.1 [Caenorhabditis elegans]
          Length = 916

 Score = 38.1 bits (88), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 20/118 (16%)

Query: 78  SVERGIHESNLGLNPIVEGQVLRI-----PVP---ETTEERRLALVKVAHA----YAEKS 125
            + + I + +L L    EG  +R+       P         R  L +  H       EK 
Sbjct: 156 PIRKTIRDCDLDLMISDEGFAVRVIKNHNRFPKQIPVAISTREELQQQRHKQQLEEYEKR 215

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           K  +R  R + +   +   +  + +ED     +  +        + I    +E++K+I
Sbjct: 216 KEILR--REEEIKQ-QNQEREKQINEDFEKRNQEKL-----KREEEIKQQNQEREKQI 265


>gi|47212254|emb|CAF93167.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 223

 Score = 38.1 bits (88), Expect = 0.57,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query: 2  NQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSP 35
            ++DL  +K  M   +S L+ D     + R SP
Sbjct: 28 EDIVDLDQVKTDMAAVLSALQDDFTRSLSLRTSP 61


>gi|189240467|ref|XP_966429.2| PREDICTED: similar to lethal with a checkpoint kinase CG4943-PA
           isoform 1 [Tribolium castaneum]
          Length = 1879

 Score = 38.1 bits (88), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 12/86 (13%)

Query: 113 ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKAS-EDM----VASLENDIQKITDS 167
            L K+      + K    ++R+  +D+LKK  K   AS E      +  LE  I  + + 
Sbjct: 744 ELDKIKSKEMNEFKEKFAHLRQKEVDYLKKYHKDEVASLEKSYSCKIRELEARIDSLREE 803

Query: 168 TIKNID-------SFFEEKKKEIMHF 186
               I        S  +EK++ I   
Sbjct: 804 YEAKIKTLSDSNMSLLQEKEQRIHEL 829


>gi|206889680|ref|YP_002249549.1| chaperone protein DnaK [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|226738190|sp|B5YH59|DNAK_THEYD RecName: Full=Chaperone protein DnaK; AltName: Full=HSP70; AltName:
           Full=Heat shock 70 kDa protein; AltName: Full=Heat shock
           protein 70
 gi|206741618|gb|ACI20675.1| chaperone protein DnaK [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 632

 Score = 38.1 bits (88), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 97  QVLRIPVP-ETTEERRLALVKVAHAYAEKS--KISVRNIRRDGMDHLKKSRKS-----GK 148
           Q +RI      +EE    +++ A A+AE+   K  +   R +  + +    K+      +
Sbjct: 492 QSIRITASSGLSEEEIKKMIREAEAHAEEDRRKKQIAEARNEADNMIYTVEKTLRDMGDR 551

Query: 149 ASEDMVASLENDIQK 163
            SED    +E  I+K
Sbjct: 552 ISEDERKRIEEAIEK 566


>gi|75911009|ref|YP_325305.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75704734|gb|ABA24410.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 1477

 Score = 38.1 bits (88), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 9/75 (12%)

Query: 105 ETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
             T++    L   A+   +++ I V N + +  +  KK+       +D V     ++ KI
Sbjct: 504 ANTQKEAKELTDKANQRVKEANIQVANTKEEAKNRTKKA-------DDDVRLALENLGKI 556

Query: 165 TDSTIKNIDSFFEEK 179
           T      ID     K
Sbjct: 557 TKQ--AKIDKETAAK 569


>gi|195650637|gb|ACG44786.1| hypothetical protein [Zea mays]
          Length = 56

 Score = 38.1 bits (88), Expect = 0.64,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 37 MLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD 72
          MLD + VE     V LN++A V+VL+   L V  ++
Sbjct: 1  MLDHIMVENASVKVALNRIAVVSVLDAHTLSVMSYE 36


>gi|149182492|ref|ZP_01860966.1| polynucleotide phosphorylase/polyadenylase [Bacillus sp. SG-1]
 gi|148849823|gb|EDL63999.1| polynucleotide phosphorylase/polyadenylase [Bacillus sp. SG-1]
          Length = 706

 Score = 37.7 bits (87), Expect = 0.69,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 57/168 (33%), Gaps = 26/168 (15%)

Query: 19  SFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDK----- 73
             L++ +   ++GR+   +LD +      S   L+Q A     +   + ++  DK     
Sbjct: 518 EILEEALQQAKSGRMH--ILDSMLSTISESRSKLSQYA----PKILTMHINP-DKIRDVI 570

Query: 74  -EMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI 132
                 + + I E+ + ++   +G V               + K A    E     VR +
Sbjct: 571 GPSGKQINKIIEETGVKIDIEQDGSVF-------ISSTDEEMNKKAKKIIEDI---VREV 620

Query: 133 R--RDGMDHLKKSRKSGKASE-DMVASLENDIQKITDSTIKNIDSFFE 177
              +  +  +K+  K G   E          I ++ +  I  ++    
Sbjct: 621 EVGQLYLGKVKRIEKFGAFVEIFNGKDGLVHISELAEERIGKVEDVVS 668


>gi|47220785|emb|CAF99992.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 705

 Score = 37.7 bits (87), Expect = 0.72,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 102 PVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
           P+ E  EE +  +  +   YA++ K + + I++   D LK  +K+ K   D+   L++ +
Sbjct: 7   PLQEQIEEWKRGVNTLDKDYAKEFKKARQEIKKKSSDTLKLQKKAKKGRGDIQPQLDSAM 66

Query: 162 QKITDSTIKNIDSFFEEKKK 181
           Q ++D  I       EE +K
Sbjct: 67  QDVSDKYI-----LLEETEK 81


>gi|268558822|ref|XP_002637402.1| C. briggsae CBR-GEI-6 protein [Caenorhabditis briggsae]
          Length = 1139

 Score = 37.7 bits (87), Expect = 0.76,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 21/98 (21%)

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKI-SVRNIRRDGMDHLKKSR----KSGKASE 151
           Q +   V +   ER  A++K     AE+ +  +V+N  R  MD + ++      + +   
Sbjct: 515 QTITRQVRKMEHERDEAMIK--KKKAEEERDEAVKN--RKEMDKVAQTLGVECDNARYER 570

Query: 152 DMVA----SLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           D         + + QK+T            EK+KE++ 
Sbjct: 571 DTFKASMDRQKKENQKLT--------QSLAEKEKELLQ 600


>gi|194226776|ref|XP_001500252.2| PREDICTED: myosin, heavy chain 9, non-muscle [Equus caballus]
          Length = 1862

 Score = 37.7 bits (87), Expect = 0.84,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKALLQGKGDSEHKRKRVEAQLQEL 1257


>gi|160425231|ref|NP_001104237.1| myosin-9 [Canis lupus familiaris]
 gi|122135145|sp|Q258K2|MYH9_CANFA RecName: Full=Myosin-9; AltName: Full=Myosin heavy chain 9; AltName:
            Full=Myosin heavy chain, non-muscle IIa; AltName:
            Full=Non-muscle myosin heavy chain IIa; Short=NMMHC II-a;
            Short=NMMHC-IIA
 gi|89994139|emb|CAJ31056.1| myosin, heavy polypeptide 9, non-muscle [Canis lupus familiaris]
          Length = 1960

 Score = 37.3 bits (86), Expect = 0.89,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 24/58 (41%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
               K   A  EK+K ++ N R +  + +K  ++    SE      E  +Q++     +
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKVLQQGKGDSEHKRKKAEAQLQELQVKFTE 1263


>gi|19114238|ref|NP_593326.1| N-acetyltransferase Nat10 (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|3219939|sp|P87115|YDK9_SCHPO RecName: Full=UPF0202 protein C20G8.09c
 gi|2094864|emb|CAB08603.1| N-acetyltransferase Nat10 (predicted) [Schizosaccharomyces pombe]
          Length = 1033

 Score = 37.3 bits (86), Expect = 0.98,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 55/149 (36%), Gaps = 34/149 (22%)

Query: 16  DTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEM 75
            TI  L+K+                         +P NQ+  + V   + + +   D+  
Sbjct: 878 KTIDTLEKEFN-----------------------LPSNQLLAMLVKLSKKI-MKCIDEIE 913

Query: 76  VASVERGIHESNLGLNPIVEGQVLRIP-VPETTEERRLALVKVAHAYAEKSKISVRNIRR 134
              +E       LG N   E    ++P      +     L       A+++ +++R  +R
Sbjct: 914 TKDIEEE-----LGSNKKTESSNSKLPEFTPLQQSLEEEL----QEGADEAMLALREKQR 964

Query: 135 DGMDHLKKSRKSGKASEDMVASLENDIQK 163
           + ++ +   + + + +E+   + EN IQK
Sbjct: 965 ELINAIDLEKYAIRGNEEDWKAAENQIQK 993


>gi|294882655|ref|XP_002769786.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239873535|gb|EER02504.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 756

 Score = 37.3 bits (86), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 100 RIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN 159
           R  + ++ E    A++ +   + E+++  V   RR   +H+      G+  ED    +  
Sbjct: 615 RTKLEKSIEASEKAML-LVKRWLEEARRDVDEARRLAGEHVDA---DGQIGEDDEKDIRK 670

Query: 160 DIQKITDSTIKNIDSFFEEKKKEI 183
            IQ   D          E K KE+
Sbjct: 671 VIQDEKDRL-----EAAEGKVKEL 689


>gi|13620252|emb|CAC36436.1| coagulase [Staphylococcus aureus]
          Length = 461

 Score = 37.3 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 27/75 (36%), Gaps = 11/75 (14%)

Query: 102 PVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
            V   T E    + K      E+ + +VR ++       +K  K    SED       ++
Sbjct: 106 SVYNLTMEEYNEISKSLKDAEEEFRKNVREVQ-------EKEVKLKTYSEDEEEKATKEV 158

Query: 162 QKITDSTIKNIDSFF 176
             +    +  +D+ +
Sbjct: 159 YDL----VAEVDTIY 169


>gi|161722697|ref|YP_001586274.1| hypothetical protein pMV158_p4 [Streptococcus agalactiae]
 gi|130889|sp|P13925|PRE_STRAG RecName: Full=Plasmid recombination enzyme; AltName:
           Full=Mobilization protein
 gi|46666|emb|CAA33713.1| unnamed protein product [Streptococcus agalactiae]
          Length = 494

 Score = 37.3 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +R+   + LKK   S K  ED ++ LE  + K T   IK IDS   E+  E+
Sbjct: 257 LRKQYQEELKKLESSKKPLEDDLSHLEELLDKKTKEYIK-IDSEASERASEL 307


>gi|118087912|ref|XP_419428.2| PREDICTED: similar to Jun dimerization protein p21SNFT [Gallus
           gallus]
          Length = 134

 Score = 37.3 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
               K      EK++++ +  R+       K  +  ++ E    SL+ +I K+TD   K+
Sbjct: 41  EEDDKKVRRR-EKNRVAAQRSRKKQTQKADKLHEEYESLEQENTSLKKEIGKLTDEM-KH 98

Query: 172 IDSFFEEKKK 181
           +    ++ +K
Sbjct: 99  LSEVLKDHEK 108


>gi|150041|gb|AAA25387.1| mobilization peptide [Plasmid pMV158]
          Length = 494

 Score = 37.3 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +R+   + LKK   S K  ED ++ LE  + K T   IK IDS   E+  E+
Sbjct: 257 LRKQYQEELKKLESSKKPLEDDLSHLEELLDKKTKEYIK-IDSEASERASEL 307


>gi|206900328|ref|YP_002250664.1| chromosome segregation SMC protein, putative [Dictyoglomus
           thermophilum H-6-12]
 gi|206739431|gb|ACI18489.1| chromosome segregation SMC protein, putative [Dictyoglomus
           thermophilum H-6-12]
          Length = 1084

 Score = 37.3 bits (86), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 8/69 (11%)

Query: 120 AYAEKSKISVRNIRRD---GMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
              E  K+   NIRR+    MD  KK  + G+  ++ +  LE + QK+ +  +       
Sbjct: 780 KALEDFKVEYENIRREKEIFMDENKKVLEEGERIKNEIKKLEREWQKLREEFV-----VL 834

Query: 177 EEKKKEIMH 185
           EE+KK+I  
Sbjct: 835 EERKKDIKE 843


>gi|73981927|ref|XP_540379.2| PREDICTED: similar to laminin, beta 4 [Canis familiaris]
          Length = 1787

 Score = 36.9 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 107  TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
            T ER   L  VA   AE ++  +R I  D    ++  + S +   D +  LE+ +
Sbjct: 1715 TLERVERLKDVAGKLAEDTEDKIRRI-ADLEKKIQDLQLSRQEKADQLKQLEDQV 1768


>gi|159112177|ref|XP_001706318.1| Dynein heavy chain [Giardia lamblia ATCC 50803]
 gi|157434413|gb|EDO78644.1| Dynein heavy chain [Giardia lamblia ATCC 50803]
          Length = 1442

 Score = 36.9 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 133  RRDGMDHLKKSR----KSGKASED--MVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            RR+  D +++      K  K  ED   +     + QKI D   K  D   E  +K+
Sbjct: 1118 RREIYDQIERLEQGNTKLEKTEEDVSELKKALVEQQKIVDERKKAADELLEVVEKD 1173


>gi|194332619|ref|NP_001123798.1| hypothetical protein LOC100170549 [Xenopus (Silurana) tropicalis]
 gi|189441913|gb|AAI67592.1| LOC100170549 protein [Xenopus (Silurana) tropicalis]
          Length = 1853

 Score = 36.9 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 71/193 (36%), Gaps = 44/193 (22%)

Query: 6    DLQNIKDRMGDTISFLKKDMMTLR-----TGRVSPSMLDLVKVEAYGSHVPLNQVANVTV 60
            + +  K R+ D+   L++ +  ++      G   P  ++LV            QV N+++
Sbjct: 1554 NAKESKRRIEDSTEKLREFIKKIKDFLTEEG-ADPESIELVA----------RQVLNISL 1602

Query: 61   LEPRMLVVSVWD-KEMVASVERGIHESNLGLN--PIVEGQVLRIPVPETTEERRLALVKV 117
                    S  D + +V  ++  I   NL      +     +        +E   A    
Sbjct: 1603 P------ASPGDIEALVNKIKESI--GNLSCTDEILTNTSEILATAKNLHKEAVEA---Q 1651

Query: 118  AHAYAEKSKIS-----VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
            A A A  + IS     ++          K  +K+ ++ +D+ + +E  +Q +T       
Sbjct: 1652 AKAEAVSANISDAQALLQEAEAKAKSAEKALKKAKQSIKDVKSKVEQTMQTLT------- 1704

Query: 173  DSFFEEKKKEIMH 185
                E+K+ +IM 
Sbjct: 1705 --GVEQKEMDIME 1715


>gi|295104851|emb|CBL02395.1| hypothetical protein [Faecalibacterium prausnitzii SL3/3]
          Length = 1683

 Score = 36.9 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 19/96 (19%)

Query: 95   EGQVLRIPVPETTEERRL----ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKAS 150
            EG  + I V    ++ R       V++A   A   K+            +     +   S
Sbjct: 969  EGSPIGIQVQAMIDDVREPTHDEYVELAKKTATYQKVL-----AQYTKKMSAIDSNKDLS 1023

Query: 151  EDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
            ED     + ++QK        +D      +K ++  
Sbjct: 1024 EDEALKQKAEVQK-------ELDDAL---EKALLEV 1049


>gi|294938950|ref|XP_002782265.1| cAMP-dependent protein kinase catalytic subunit,, putative
           [Perkinsus marinus ATCC 50983]
 gi|239893793|gb|EER14060.1| cAMP-dependent protein kinase catalytic subunit,, putative
           [Perkinsus marinus ATCC 50983]
          Length = 661

 Score = 36.9 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 100 RIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN 159
           R  + ++ E    A++ +   + E+++  V   RR   +H+      G+  ED    +  
Sbjct: 466 RTKLEKSIEASEKAML-LVKRWLEEARRDVDGARRLAGEHVDA---DGQIGEDDEKDIRK 521

Query: 160 DIQKITDSTIKNIDSFFEEKKKEI 183
            IQ   D          E K KE+
Sbjct: 522 VIQDEKDRL-----EAAEGKVKEL 540


>gi|189201017|ref|XP_001936845.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187983944|gb|EDU49432.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 598

 Score = 36.9 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 10/77 (12%)

Query: 95  EGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN----IRRDGMDHLKKSRKSGKAS 150
           E +  R+      EER           AE ++ + R       R  +  L++ RK  +  
Sbjct: 418 EAETARLKAQVEAEEREQ------KRQAEAARKARRKQEQEAERKTLQFLEQERKQKELE 471

Query: 151 EDMVASLENDIQKITDS 167
           E      E ++ K T+ 
Sbjct: 472 EKERRRKEAEVDKETER 488


>gi|229825233|ref|ZP_04451302.1| hypothetical protein GCWU000182_00585 [Abiotrophia defectiva ATCC
           49176]
 gi|229790605|gb|EEP26719.1| hypothetical protein GCWU000182_00585 [Abiotrophia defectiva ATCC
           49176]
          Length = 178

 Score = 36.9 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 106 TTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKIT 165
            T E    L K      E  K+   N RR+  + +K++R+ G  SE+       D Q+  
Sbjct: 28  MTYEGLQELEKEL----EHLKV---NRRREIAEKIKEAREQGDLSENAEYDAAKDEQRDI 80

Query: 166 DSTIKNIDSFFEEKK 180
           ++ I+ I+   +  +
Sbjct: 81  EARIEEIEKILKNAE 95


>gi|261278376|ref|NP_001159727.1| calmodulin regulated spectrin-associated protein 1a [Danio rerio]
          Length = 1458

 Score = 36.9 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 105  ETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
            E  ++R   L+K     AE+++  +R  + +    LK+     KA ED V   E    K 
Sbjct: 1144 ELAKKRAAFLLKQQRK-AEEAR--IRKQQLEAESELKRDEARRKAEEDRVRKEEE---KA 1197

Query: 165  TDSTIKNIDSFFEEKKKEIMH 185
                IK    +   K++E++ 
Sbjct: 1198 RRELIKQ--EYLRRKQQELLE 1216


>gi|301757430|ref|XP_002914565.1| PREDICTED: myosin-9-like [Ailuropoda melanoleuca]
 gi|281351115|gb|EFB26699.1| hypothetical protein PANDA_002468 [Ailuropoda melanoleuca]
          Length = 1961

 Score = 36.9 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 23/58 (39%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
               K   A  EK+K ++ N R +  + +K   +    SE      E  +Q++     +
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKVLLQGKGDSEHKRKKAEAQLQELQVKFTE 1263


>gi|147900646|ref|NP_001079627.1| heat shock 70kDa protein 9 (mortalin) [Xenopus laevis]
 gi|28277241|gb|AAH45259.1| MGC52616 protein [Xenopus laevis]
          Length = 670

 Score = 36.9 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 15/93 (16%)

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSK------ISVRNIRRDGMDHLKKSRKSGK-A 149
           Q++       +++    +VK A  YAE+ +       +V N      D   K  +     
Sbjct: 538 QIVIQSSGGLSKDDIENMVKNAEKYAEEDRRRKERVEAVNNAEGIIHDTESKMEEFKDQL 597

Query: 150 SEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
             D    L+ +I K        +      K +E
Sbjct: 598 PADECNKLKEEISK--------VKELLARKDEE 622


>gi|253744076|gb|EET00332.1| Dynein heavy chain [Giardia intestinalis ATCC 50581]
          Length = 1375

 Score = 36.9 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 133  RRDGMDHLKKSR----KSGKASED--MVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            RR+  D +++      K  K  ED   +     + QKI D   K  D   E  +K+
Sbjct: 1076 RREIYDQIERLEQGNTKLEKTEEDVSELKKALVEQQKIVDERKKAADELLEVVEKD 1131


>gi|146296476|ref|YP_001180247.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166201242|sp|A4XJH1|SYS_CALS8 RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|145410052|gb|ABP67056.1| seryl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 420

 Score = 36.9 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 15/95 (15%)

Query: 89  GLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGK 148
           GLN      +   P+ E  E+RR  L +V    A         I+      + K +K GK
Sbjct: 17  GLNKRN-KDISIAPILELDEKRRKLLAEVEKMKA---------IQNQKSKEIPKLKKEGK 66

Query: 149 ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
                   L N++++++D  IK +DS  +E + EI
Sbjct: 67  ----DTTELMNELKELSDK-IKELDSQVKEVEDEI 96


>gi|553596|gb|AAA59888.1| cellular myosin heavy chain [Homo sapiens]
          Length = 1337

 Score = 36.9 bits (85), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKVLLQGKGDSEHKRKKVEAQLQEL 1257


>gi|308161971|gb|EFO64400.1| Dynein heavy chain [Giardia lamblia P15]
          Length = 1382

 Score = 36.9 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 133  RRDGMDHLKKSR----KSGKASED--MVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            RR+  D +++      K  K  ED   +     + QKI D   K  D   E  +K+
Sbjct: 1076 RREIYDQIERLEQGNTKLEKTEEDVSELKKALVEQQKIVDERKKAADELLEVVEKD 1131


>gi|147792206|emb|CAN68572.1| hypothetical protein VITISV_023885 [Vitis vinifera]
          Length = 674

 Score = 36.9 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 20/95 (21%)

Query: 106 TTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKS--------------RKSGKASE 151
             EE R   V++    +E   I+VR +  D    LK+                K  +A+E
Sbjct: 514 NNEELR---VQLVRVESEL--IAVRKVIADAKKLLKELEEMMEATKVEACQNEKENEAAE 568

Query: 152 DMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
                 + +I ++    ++ +    E K+KE+   
Sbjct: 569 AKCKDADQEIDQL-KKELEELRVSSEAKRKELEEL 602


>gi|148228693|ref|NP_001080166.1| heat shock 70kDa protein 9 (mortalin) [Xenopus laevis]
 gi|28175297|gb|AAH45130.1| Hspa9b protein [Xenopus laevis]
          Length = 670

 Score = 36.9 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 15/93 (16%)

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSK------ISVRNIRRDGMDHLKKSRKSGK-A 149
           Q++       +++    +VK A  YAE+ +       +V N      D   K  +     
Sbjct: 538 QIVIQSSGGLSKDDIENMVKNAEKYAEEDRRRKEQVEAVNNAEGIIHDTESKMEEFKDQL 597

Query: 150 SEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
             D    L+ +I K        +      K +E
Sbjct: 598 PADECNKLKEEISK--------VKELLARKDEE 622


>gi|221486144|gb|EEE24414.1| conserved hypothetical protein [Toxoplasma gondii GT1]
          Length = 1251

 Score = 36.9 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 134  RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
             D  +  KK +K   A+ D   + E  I+K+TD+  ++       K+KE
Sbjct: 996  NDLSEENKKLKKDLSAAADDKEAKEKQIKKLTDAQARDQQEIAAIKQKE 1044


>gi|29436380|gb|AAH49849.1| MYH9 protein [Homo sapiens]
          Length = 1374

 Score = 36.9 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKVLLQGKGDSEHKRKKVEAQLQEL 1257


>gi|115712727|ref|XP_780688.2| PREDICTED: similar to Adenylate cyclase 2 [Strongylocentrotus
           purpuratus]
 gi|115975660|ref|XP_001195151.1| PREDICTED: similar to Adenylate cyclase 2 [Strongylocentrotus
           purpuratus]
          Length = 889

 Score = 36.9 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 25/46 (54%)

Query: 47  GSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNP 92
           G+  P  Q+A + V +   L VS+++  +  SV +GI+  N  L P
Sbjct: 310 GADKPFQQIATMPVPKSVGLTVSIYEHSVTRSVAKGIYAMNACLVP 355


>gi|325116251|emb|CBZ51804.1| GF13052, related [Neospora caninum Liverpool]
          Length = 1235

 Score = 36.9 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%)

Query: 134  RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
             D +D  KK +K    + D   + E  I+K+TD+  ++ +     + KE
Sbjct: 979  NDLVDESKKLKKDLNVTADDKEAKEKQIKKLTDAQARDQEEIAAIRLKE 1027


>gi|237834545|ref|XP_002366570.1| hypothetical protein TGME49_039300 [Toxoplasma gondii ME49]
 gi|211964234|gb|EEA99429.1| hypothetical protein TGME49_039300 [Toxoplasma gondii ME49]
 gi|221503641|gb|EEE29332.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 1251

 Score = 36.9 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 134  RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
             D  +  KK +K   A+ D   + E  I+K+TD+  ++       K+KE
Sbjct: 996  NDLSEENKKLKKDLSAAADDKEAKEKQIKKLTDAQARDQQEIAAIKQKE 1044


>gi|170106955|ref|XP_001884688.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164640250|gb|EDR04516.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1567

 Score = 36.5 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 126  KISVRNI---RRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST---IKNIDSFFEEK 179
            K  +RN    R+  +D L+++ +    ++  +   E  IQK+          ++   + K
Sbjct: 1285 KQHLRNRLQQRKFELDSLERAYRKTTTNKSQIKRKEPGIQKLAKKYNDICAELEKMIKRK 1344

Query: 180  K 180
            +
Sbjct: 1345 E 1345


>gi|315134550|dbj|BAJ46128.1| outer-arm dynein beta chain [Giardia intestinalis]
          Length = 1343

 Score = 36.5 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 133  RRDGMDHLKKSR----KSGKASED--MVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            RR+  D +++      K  K  ED   +     + QKI D   K  D   E  +K+
Sbjct: 1076 RREIYDQIERLEQGNTKLEKTEEDVSELKKALVEQQKIVDERKKAADELLEVVEKD 1131


>gi|327259046|ref|XP_003214349.1| PREDICTED: zinc finger protein 238.2-like [Anolis carolinensis]
          Length = 617

 Score = 36.5 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 20/99 (20%)

Query: 108 EERRLALVKVAHAYAEKSKI-------SVRNIRRDGMDHLKKSRKS-GKASED--MVASL 157
            +    ++K  +   EK  I        + ++R++  + L + +K   +  ED   + S 
Sbjct: 4   RDMMRDMMKEVYRMQEKQDILQKMVQEQMSDMRKEWKEDLGEMKKEMNQIQEDLRELRSE 63

Query: 158 ENDIQKITDSTIKNIDSF------FEEKKKEI----MHF 186
           + +I+KI ++T K I          E K++E+    M F
Sbjct: 64  KKEIRKIQETTQKEIKEIYERNRKMERKQEELEAKEMEF 102


>gi|28465343|dbj|BAC57468.1| pyruvate dehydrogenase E1alpha subunit [Beta vulgaris]
          Length = 395

 Score = 36.5 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 125 SKISVRNIR--RDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDS 174
           ++  +  IR  RD ++ ++K   +     E  +  +E +I+K  D  I     
Sbjct: 308 TRDEISGIRQERDPIERVRKLLLAHDIAGEKELKDIEKEIRKEVDEAIAKAKE 360


>gi|28465345|dbj|BAC57469.1| pyruvate dehydrogenase E1 alpha subunit [Beta vulgaris]
          Length = 395

 Score = 36.5 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 125 SKISVRNIR--RDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDS 174
           ++  +  IR  RD ++ ++K   +     E  +  +E +I+K  D  I     
Sbjct: 308 TRDEISGIRQERDPIERVRKLLLAHDIAGEKELKDIEKEIRKEVDEAIAKAKE 360


>gi|284810433|gb|ADB96016.1| intraconoid microtubule associated protein 1 [Toxoplasma gondii]
          Length = 1231

 Score = 36.5 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%)

Query: 134  RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
             D  +  KK +K   A+ D   + E  I+K+TD+  ++       K+KE
Sbjct: 976  NDLSEENKKLKKDLSAAADDKEAKEKQIKKLTDAQARDQQEIAAIKQKE 1024


>gi|94499080|ref|ZP_01305618.1| transposase IS4 family protein [Oceanobacter sp. RED65]
 gi|94501335|ref|ZP_01307856.1| transposase IS4 family protein [Oceanobacter sp. RED65]
 gi|94426606|gb|EAT11593.1| transposase IS4 family protein [Oceanobacter sp. RED65]
 gi|94428712|gb|EAT13684.1| transposase IS4 family protein [Oceanobacter sp. RED65]
          Length = 523

 Score = 36.5 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              E+ +  ++ + +  +   KK  K+    E+     +  I+ ++D+    ID F + 
Sbjct: 159 KELEEKRAKIKRLIKHHITEHKKIDKNESLGEERAKCAQQAIKTLSDAY-DKIDKFLKT 216


>gi|157116418|ref|XP_001658467.1| hypothetical protein AaeL_AAEL007573 [Aedes aegypti]
 gi|108876491|gb|EAT40716.1| conserved hypothetical protein [Aedes aegypti]
          Length = 543

 Score = 36.5 bits (84), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 138 DHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
             +KK ++ G  SED   + E D+    D   + ID     K+KE+M  
Sbjct: 68  KLIKKQKEDGD-SEDEAENREEDVLDQLDE--QLIDKPKTNKEKELMSL 113


>gi|291389910|ref|XP_002711459.1| PREDICTED: myosin heavy chain [Oryctolagus cuniculus]
          Length = 1962

 Score = 36.5 bits (84), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ + R +  + +K  ++    SE      E  +Q++
Sbjct: 1206 EQTKRVKANLEKAKQTLEHERGELANEVKALQQGKGDSEHKRKKAEAQLQEL 1257


>gi|126339824|ref|XP_001376000.1| PREDICTED: similar to myosin, heavy chain 9, non-muscle [Monodelphis
            domestica]
          Length = 1960

 Score = 36.5 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ + R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKANLEKAKQALESERAELSNEVKALLQGKGDSEHKRKKVETQLQEL 1257


>gi|312222629|dbj|BAJ33527.1| outer-arm dynein beta [Giardia intestinalis]
          Length = 2565

 Score = 36.5 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 133  RRDGMDHLKKSR----KSGKASED--MVASLENDIQKITDSTIKNIDSFFEEKKKE 182
            RR+  D +++      K  K  ED   +     + QKI D   K  D   E  +K+
Sbjct: 1076 RREIYDQIERLEQGNTKLEKTEEDVSELKKALVEQQKIVDERKKAADELLEVVEKD 1131


>gi|74180977|dbj|BAE27768.1| unnamed protein product [Mus musculus]
          Length = 2031

 Score = 36.5 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1277 EQTKRVKATLEKAKQTLENERGELANEVKALLQGKGDSEHKRKKVEAQLQEL 1328


>gi|94500088|ref|ZP_01306622.1| transposase IS4 family protein [Oceanobacter sp. RED65]
 gi|94427661|gb|EAT12637.1| transposase IS4 family protein [Oceanobacter sp. RED65]
          Length = 523

 Score = 36.5 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 120 AYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEE 178
              E+ +  ++ + +  +   KK  K+    E+     +  I+ ++D+    ID F + 
Sbjct: 159 KELEEKRAKIKRLIKHHITEHKKIDKNESLGEERAKCAQQAIKTLSDAY-DKIDKFLKT 216


>gi|320592982|gb|EFX05391.1| WD repeat protein [Grosmannia clavigera kw1407]
          Length = 1507

 Score = 36.5 bits (84), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 72/226 (31%), Gaps = 59/226 (26%)

Query: 3    QVIDLQNIKDRMGDTISFLKKDMMTLR----TGRVS-PSMLD-------LVKVEAYGSH- 49
               +  +++ R   + +  +     LR    +G       +D        V + A GS  
Sbjct: 1293 DPFNFADVESRWQRSDAHHEDKFRELRRALGSGAADGSGAVDLDAIGATPVTMAASGSEG 1352

Query: 50   ---VPLNQVANVTVL-EPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPE 105
                 L+Q+A V      R + + +       ++ R +       +P   GQ    P P+
Sbjct: 1353 ATTTTLSQLALVIPRAGGRFVELRMHSATSRKAITRAVQH-----SPQFRGQQ---PQPD 1404

Query: 106  TTEERRLALVKVAHAYA--EKS---------------------KISVRNIRRDGMDHLKK 142
              +E    LV +       E +                     +  +R          + 
Sbjct: 1405 PDDE----LVLLVRMGGVHEGATEAAAAAVERARRVSDLANGWRAQIRRATARRQKTHQT 1460

Query: 143  SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE---IMH 185
             RK G    D +  L+ D+ +  D  + +ID+     +KE   ++ 
Sbjct: 1461 WRKDGSVRPDDLHRLDRDLLRGQDKHLAHIDTV----EKEAVRLLE 1502


>gi|297809193|ref|XP_002872480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318317|gb|EFH48739.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score = 36.2 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 33/76 (43%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
             + +  L K+ +   E  K  + N  ++ +  +K+     +A  +      N+IQK++ 
Sbjct: 246 ISQMKKELEKLHNEMLEGIKEKISNQLKESLKDVKEQLAKAQAEREETEKKMNEIQKLSS 305

Query: 167 STIKNIDSFFEEKKKE 182
             I+ +     + +KE
Sbjct: 306 DEIRRLREQLNKAEKE 321


>gi|307707928|ref|ZP_07644403.1| PspA [Streptococcus mitis NCTC 12261]
 gi|307615993|gb|EFN95191.1| PspA [Streptococcus mitis NCTC 12261]
          Length = 1088

 Score = 36.2 bits (83), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 7/52 (13%)

Query: 138 DHLKKSRKSGKASED-------MVASLENDIQKITDSTIKNIDSFFEEKKKE 182
             +K   K+ + ++D          ++ +++ K+TD   K +D     K+KE
Sbjct: 330 KAVKAIEKAKEVAQDAFDKAASDTQAVADELNKLTDEYNKALDEVKAAKEKE 381


>gi|332265086|ref|XP_003281557.1| PREDICTED: myosin-11 [Nomascus leucogenys]
          Length = 1358

 Score = 36.2 bits (83), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 9/100 (9%)

Query: 91  NPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSR-KSGKA 149
               +G  + + V    +  R      A    E  K   R  ++   + LK+   K  + 
Sbjct: 809 TKTNDGLTVCVQVKPLLQVTRQEEEMQAK-EDELQKTKER--QQKAENELKELEQKHSQL 865

Query: 150 SEDMVASLENDIQKITDSTIKNIDSF---FEEKKKEIMHF 186
           +E     L+  +Q  T+      +        KK+E+   
Sbjct: 866 TE-EKNLLQEQLQAETELY-AEAEEMRVRLAAKKQELEEI 903


>gi|154278942|ref|XP_001540284.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150412227|gb|EDN07614.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 749

 Score = 36.2 bits (83), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 127 ISVRNIRRDGMD-HLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
           +  R +RR+  +  +KKS    K S D V    +D++K  D  +K 
Sbjct: 37  VKTRKLRREAKESDVKKSNSDVKKSNDDVKKSNDDVKKSNDD-VKK 81


>gi|227889913|ref|ZP_04007718.1| conserved hypothetical protein [Lactobacillus johnsonii ATCC 33200]
 gi|227849357|gb|EEJ59443.1| conserved hypothetical protein [Lactobacillus johnsonii ATCC 33200]
          Length = 803

 Score = 36.2 bits (83), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 4/78 (5%)

Query: 106 TTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKIT 165
            T++ +  L+      A+ +  ++ N +    D +K++   G   ED+ +     + +  
Sbjct: 564 LTDQMKQNLIDQVDQVADNATKAINNAQ--TNDDVKEAETKGL--EDINSIQVPSLVESK 619

Query: 166 DSTIKNIDSFFEEKKKEI 183
           D  IK ID   E+K  EI
Sbjct: 620 DDAIKEIDDALEKKTDEI 637


>gi|195326267|ref|XP_002029851.1| GM25136 [Drosophila sechellia]
 gi|194118794|gb|EDW40837.1| GM25136 [Drosophila sechellia]
          Length = 133

 Score = 36.2 bits (83), Expect = 2.1,   Method: Composition-based stats.
 Identities = 4/34 (11%), Positives = 18/34 (52%)

Query: 1   MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVS 34
           + ++++   +  +M  ++  +K+D +   + R +
Sbjct: 71  LREILNFDGLNSQMQKSVMQMKEDFVKHLSLRST 104


>gi|307191186|gb|EFN74883.1| Serine proteinase stubble [Camponotus floridanus]
          Length = 1043

 Score = 36.2 bits (83), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 16/106 (15%)

Query: 50  VPLNQVAN---VTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQ----VLRIP 102
           VP +Q A    V   +   L +    + +   +E    E       I +G     V+R+P
Sbjct: 419 VPYDQCATNNHVGRKDDLYLAIDP--RNLDKDIEAETVEV-----VITDGNGTMSVVRVP 471

Query: 103 VPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGK 148
                 E+           AE +K++ RN RRD    LKK  K  +
Sbjct: 472 KGANETEQIEQARNEQTKEAE-AKVTKRN-RRDVKHALKKDNKQIE 515


>gi|6981236|ref|NP_037326.1| myosin-9 [Rattus norvegicus]
 gi|13431671|sp|Q62812|MYH9_RAT RecName: Full=Myosin-9; AltName: Full=Cellular myosin heavy chain,
            type A; AltName: Full=Myosin heavy chain 9; AltName:
            Full=Myosin heavy chain, non-muscle IIa; AltName:
            Full=Non-muscle myosin heavy chain A; Short=NMMHC-A;
            AltName: Full=Non-muscle myosin heavy chain IIa;
            Short=NMMHC II-a; Short=NMMHC-IIA
 gi|967249|gb|AAA74950.1| nonmuscle myosin heavy chain-A [Rattus norvegicus]
          Length = 1961

 Score = 36.2 bits (83), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKATLEKAKQTLENERGELANEVKALLQGKGDSEHKRKKVEAQLQEL 1257


>gi|149066032|gb|EDM15905.1| myosin, heavy polypeptide 9, non-muscle [Rattus norvegicus]
          Length = 1960

 Score = 36.2 bits (83), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKATLEKAKQTLENERGELANEVKALLQGKGDSEHKRKKVEAQLQEL 1257


>gi|188996676|ref|YP_001930927.1| hypothetical protein SYO3AOP1_0740 [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931743|gb|ACD66373.1| hypothetical protein SYO3AOP1_0740 [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 439

 Score = 36.2 bits (83), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI-QKITD--STIKNIDS-FFEEKKK 181
           + + N +      LKK  + G   ED  A+++  + Q+  +       ID    E K+K
Sbjct: 14  VGLANAQTIENPILKKLVEKGILKEDEAAAIDEQLAQEEAEKAKYQAEIDKTAMEAKEK 72


>gi|114326446|ref|NP_071855.2| myosin-9 isoform 1 [Mus musculus]
 gi|205371802|sp|Q8VDD5|MYH9_MOUSE RecName: Full=Myosin-9; AltName: Full=Cellular myosin heavy chain,
            type A; AltName: Full=Myosin heavy chain 9; AltName:
            Full=Myosin heavy chain, non-muscle IIa; AltName:
            Full=Non-muscle myosin heavy chain A; Short=NMMHC-A;
            AltName: Full=Non-muscle myosin heavy chain IIa;
            Short=NMMHC II-a; Short=NMMHC-IIA
 gi|74180962|dbj|BAE27761.1| unnamed protein product [Mus musculus]
 gi|74180967|dbj|BAE27763.1| unnamed protein product [Mus musculus]
 gi|74180971|dbj|BAE27765.1| unnamed protein product [Mus musculus]
 gi|74180973|dbj|BAE27766.1| unnamed protein product [Mus musculus]
 gi|74180975|dbj|BAE27767.1| unnamed protein product [Mus musculus]
 gi|74180985|dbj|BAE27772.1| unnamed protein product [Mus musculus]
 gi|74180987|dbj|BAE27773.1| unnamed protein product [Mus musculus]
 gi|74180995|dbj|BAE27776.1| unnamed protein product [Mus musculus]
 gi|74180997|dbj|BAE27777.1| unnamed protein product [Mus musculus]
 gi|74180999|dbj|BAE27778.1| unnamed protein product [Mus musculus]
 gi|74181014|dbj|BAE27783.1| unnamed protein product [Mus musculus]
 gi|74181018|dbj|BAE27785.1| unnamed protein product [Mus musculus]
 gi|74181123|dbj|BAE27829.1| unnamed protein product [Mus musculus]
 gi|74184545|dbj|BAE27894.1| unnamed protein product [Mus musculus]
 gi|74184580|dbj|BAE27906.1| unnamed protein product [Mus musculus]
 gi|123233477|emb|CAM23428.1| myosin, heavy polypeptide 9, non-muscle [Mus musculus]
 gi|148697703|gb|EDL29650.1| myosin, heavy polypeptide 9, non-muscle [Mus musculus]
          Length = 1960

 Score = 36.2 bits (83), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKATLEKAKQTLENERGELANEVKALLQGKGDSEHKRKKVEAQLQEL 1257


>gi|17978023|emb|CAC85955.1| nonmuscle heavy chain myosin II-A [Mus musculus]
          Length = 1960

 Score = 36.2 bits (83), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKATLEKAKQTLENERGELANEVKALLQGKGDSEHKRKKVEAQLQEL 1257


>gi|300867568|ref|ZP_07112218.1| hypothetical protein OSCI_3410039 [Oscillatoria sp. PCC 6506]
 gi|300334456|emb|CBN57388.1| hypothetical protein OSCI_3410039 [Oscillatoria sp. PCC 6506]
          Length = 989

 Score = 36.2 bits (83), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 120 AYAEKSKISVRNIRR---DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFF 176
             AE+++  + ++ +   +    +K + K+   +ED +   E    K+T   ++  +   
Sbjct: 485 KKAEQAEQKMADVNQKAVEAQKQVKMAEKTRSFAEDQLKEAEAQ-SKLTQQEMQKANQEL 543

Query: 177 EEKKKEI 183
              K E+
Sbjct: 544 AAAKTEL 550


>gi|297260956|ref|XP_001083662.2| PREDICTED: myosin-9-like [Macaca mulatta]
          Length = 1879

 Score = 36.2 bits (83), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1125 EQTKRVKANLEKAKQTLENERGELANEVKVLLQGKGDSEHKRKKVEAQLQEL 1176


>gi|315052968|ref|XP_003175858.1| M protein repeat protein [Arthroderma gypseum CBS 118893]
 gi|311341173|gb|EFR00376.1| M protein repeat protein [Arthroderma gypseum CBS 118893]
          Length = 843

 Score = 36.2 bits (83), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
            RR+ ++ +K+     +  +D V  LE  +QK+ +     ++   E+ ++
Sbjct: 770 ARREVVELMKEVE-EKRVGDDEVRKLEEQVQKLNERYQTTLEMLGEKSEQ 818


>gi|242029828|gb|ACS76941.1| gag protein [Human immunodeficiency virus 1]
          Length = 456

 Score = 36.2 bits (83), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP      EG  Q+++  +P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 31  LNPGLLETSEGCKQLIKQLLPALQTGTEELRSLYNTVATLYCVHAKIEVRDT-KEALDKI 89

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+    ++  +Q  ++ D 
Sbjct: 90  ----------EEEQKQVQQKMQPTEMADK 108


>gi|327272416|ref|XP_003220981.1| PREDICTED: myosin-9-like [Anolis carolinensis]
          Length = 1960

 Score = 36.2 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 22/58 (37%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
               K      EK+K ++ + R +  + +K   +    SE      E  +Q++     +
Sbjct: 1206 EQTKRVKVSLEKAKQALESERAELANEVKVLLQFKGDSEHKRKRGETQLQELQVKFTE 1263


>gi|213138154|gb|ACJ44748.1| gag protein [Human immunodeficiency virus 1]
          Length = 491

 Score = 36.2 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 17/91 (18%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP     +EG  Q++R   P     TEE R     VA  Y   ++I VR+  ++ +D +
Sbjct: 46  LNPGLLETLEGCKQIIRQLQPALQTGTEELRSLFNTVATLYCVHARIEVRDT-KEALDKI 104

Query: 141 -----KKSRKSGKASEDMVASLEND--IQKI 164
                K  +K+ +A +D     +N   +Q +
Sbjct: 105 EEEQNKSQQKTQQAKKDDGKISQNYPIVQNL 135


>gi|282919124|ref|ZP_06326859.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus C427]
 gi|282316934|gb|EFB47308.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus C427]
          Length = 932

 Score = 35.8 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGIISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|242029824|gb|ACS76939.1| gag protein [Human immunodeficiency virus 1]
          Length = 454

 Score = 35.8 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP      EG  Q+++  +P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 29  LNPGLLETAEGCKQLIKQLLPALQTGTEELRSLYNTVATLYCVHAKIEVRDT-KEALDKI 87

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+     +  +Q  ++ D 
Sbjct: 88  ----------EEEQKQAQQKMQPTEMADK 106


>gi|148550593|ref|YP_001260032.1| pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas
           wittichii RW1]
 gi|148503012|gb|ABQ71265.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas
           wittichii RW1]
          Length = 360

 Score = 35.8 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 26/38 (68%), Gaps = 1/38 (2%)

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
            +VR+ + D ++HLK+  ++   +ED + +LE +I++I
Sbjct: 296 QAVRD-KSDAIEHLKQELEAAGVTEDELKALEKEIRQI 332


>gi|148672868|gb|EDL04815.1| laminin, alpha 2, isoform CRA_a [Mus musculus]
          Length = 2492

 Score = 35.8 bits (82), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
            A+VK        +  SVRN+ ++    + K +   +  ED +    ++I+++ +   K  
Sbjct: 2095 AVVKDPSKNIADAGTSVRNLEQEADRLIDKLKPIKEL-EDNLKKNISEIKELINQARKQA 2153

Query: 173  DSF 175
            +S 
Sbjct: 2154 NSI 2156


>gi|148672869|gb|EDL04816.1| laminin, alpha 2, isoform CRA_b [Mus musculus]
          Length = 3112

 Score = 35.8 bits (82), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
            A+VK        +  SVRN+ ++    + K +   +  ED +    ++I+++ +   K  
Sbjct: 2077 AVVKDPSKNIADAGTSVRNLEQEADRLIDKLKPIKEL-EDNLKKNISEIKELINQARKQA 2135

Query: 173  DSF 175
            +S 
Sbjct: 2136 NSI 2138


>gi|313892483|ref|ZP_07826072.1| putative Phage T7 tail fiber protein [Dialister microaerophilus
           UPII 345-E]
 gi|313119062|gb|EFR42265.1| putative Phage T7 tail fiber protein [Dialister microaerophilus
           UPII 345-E]
          Length = 683

 Score = 35.8 bits (82), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 105 ETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI--Q 162
           +  ++     V+ A  YA ++K         G  ++++  ++   +++ +     ++  Q
Sbjct: 423 KNNKDTVQEYVEDAKRYANEAK------ENSGAKNIEEKLQNKFYTKEEINQKLKELPSQ 476

Query: 163 KITDSTIKN-IDSFFEEKK 180
           K+TD   K  +D   E+K+
Sbjct: 477 KVTDVYSKKEVDDKLEKKE 495


>gi|238009876|gb|ACR35973.1| unknown [Zea mays]
          Length = 779

 Score = 35.8 bits (82), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 23/88 (26%)

Query: 117 VAHAYAEKSKISVRN---------IRRDGMD-HLKKSRKSGKASEDMVAS----LENDIQ 162
            +    E  K ++RN          R+  ++  +K++  SG A ED        +E +++
Sbjct: 186 QSKPIYEAFK-AIRNSSNWDSLSDARKRIVEAQIKEAVLSGVALEDEQRKKFNQIEQELE 244

Query: 163 KITDST-------IKNIDSFFEEKKKEI 183
           K+T           K  +    +K KEI
Sbjct: 245 KLTQKFSENVLDATKKFEKLITDK-KEI 271


>gi|86561512|ref|NP_001021740.2| hypothetical protein Y26D4A.14 [Caenorhabditis elegans]
 gi|70720768|emb|CAE17957.2| C. elegans predicted protein Y26D4A.14 [Caenorhabditis elegans]
          Length = 952

 Score = 35.8 bits (82), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 14/97 (14%)

Query: 78  SVERGIHESNLGLNPIVEGQVLRI-----PVP---ETTEERRLALVKVAHA----YAEKS 125
            + + I + +L L    EG  +R+       P         R  L +  H       EK 
Sbjct: 156 PIRKTIRDCDLDLMISDEGFAVRVIKNHSRFPKQIPVAISTREELQQQRHKQQLEEYEKR 215

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ 162
              +  +RR+     +   +  + ++D     +  +Q
Sbjct: 216 NQEI--LRREEEIKQQNQEREKQINDDFEKRKQEKLQ 250


>gi|258422554|ref|ZP_05685462.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A9635]
 gi|257847311|gb|EEV71317.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A9635]
          Length = 932

 Score = 35.8 bits (82), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGIISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|49483603|ref|YP_040827.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257425477|ref|ZP_05601902.1| succinyl-transferring oxoglutarate dehydrogenase, E1 component
           [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428137|ref|ZP_05604535.1| succinyl-transferring oxoglutarate dehydrogenase, E1 component
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257430769|ref|ZP_05607151.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257433528|ref|ZP_05609886.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257436369|ref|ZP_05612416.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus M876]
 gi|282903994|ref|ZP_06311882.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus C160]
 gi|282905758|ref|ZP_06313613.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282908729|ref|ZP_06316547.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282910993|ref|ZP_06318795.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282914202|ref|ZP_06321989.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus
           subsp. aureus M899]
 gi|282924307|ref|ZP_06331981.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus C101]
 gi|283958176|ref|ZP_06375627.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293501228|ref|ZP_06667079.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510190|ref|ZP_06668898.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus M809]
 gi|293526782|ref|ZP_06671467.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus
           subsp. aureus M1015]
 gi|295427926|ref|ZP_06820558.1| oxoglutarate dehydrogenase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591113|ref|ZP_06949751.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus MN8]
 gi|81651147|sp|Q6GGZ5|ODO1_STAAR RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|49241732|emb|CAG40422.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257271934|gb|EEV04072.1| succinyl-transferring oxoglutarate dehydrogenase, E1 component
           [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257274978|gb|EEV06465.1| succinyl-transferring oxoglutarate dehydrogenase, E1 component
           [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278897|gb|EEV09516.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257281621|gb|EEV11758.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257284651|gb|EEV14771.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus M876]
 gi|282313694|gb|EFB44087.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus C101]
 gi|282322270|gb|EFB52594.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus
           subsp. aureus M899]
 gi|282324688|gb|EFB54998.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282326993|gb|EFB57288.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282331050|gb|EFB60564.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus Btn1260]
 gi|282595612|gb|EFC00576.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus C160]
 gi|283790325|gb|EFC29142.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290920854|gb|EFD97917.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291096233|gb|EFE26494.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467134|gb|EFF09652.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus M809]
 gi|295128284|gb|EFG57918.1| oxoglutarate dehydrogenase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575999|gb|EFH94715.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus MN8]
 gi|312438187|gb|ADQ77258.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|315195306|gb|EFU25693.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 932

 Score = 35.8 bits (82), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGIISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|59042884|gb|AAW83831.1| E1 alpha subunit of pyruvate dehydrogenase [Petunia x hybrida]
          Length = 390

 Score = 35.8 bits (82), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 125 SKISVRNIR--RDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDS 174
           ++  +  +R  RD ++ ++K   +    +E  +  +E + +KI D  I     
Sbjct: 303 TRDEISGVRQERDPIERIRKLILAHDIATEKELKDIEKEKRKIVDEAIAKAKE 355


>gi|330926046|ref|XP_003301303.1| hypothetical protein PTT_12768 [Pyrenophora teres f. teres 0-1]
 gi|311324096|gb|EFQ90604.1| hypothetical protein PTT_12768 [Pyrenophora teres f. teres 0-1]
          Length = 646

 Score = 35.8 bits (82), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 33/120 (27%)

Query: 90  LNPIVEGQV----LRIPVPE--------------TTEERRLALVKVAHAYAEKSKISVRN 131
            +P  +G +     R  +P+              T EE    L K            +RN
Sbjct: 212 FSPRRDGGIRKKNARFDIPQERNLFNIDHLIQSCTNEEELKEL-KQQKRL-------LRN 263

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK---NIDSFFEEKK---KEIMH 185
            R+  +D  ++ +K  +  E+        I ++ D         D+   EK+   +E M 
Sbjct: 264 -RQAALDSRQRKKKHTEELEEEKKQWMEKICQMQDDFAAMRIEYDALVAEKENWHRESME 322


>gi|189203065|ref|XP_001937868.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187984967|gb|EDU50455.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 646

 Score = 35.8 bits (82), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 33/120 (27%)

Query: 90  LNPIVEGQV----LRIPVPE--------------TTEERRLALVKVAHAYAEKSKISVRN 131
            +P  +G +     R  +P+              T EE    L K            +RN
Sbjct: 212 FSPRRDGGIRKKNARFDIPQERNLFNIDHLIQSCTNEEELKEL-KQQKRL-------LRN 263

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK---NIDSFFEEKK---KEIMH 185
            R+  +D  ++ +K  +  E+        I ++ D         D+   EK+   +E M 
Sbjct: 264 -RQAALDSRQRKKKHTEELEEEKKQWMEKICQMQDDFAAMRIEYDALVAEKENWHRESME 322


>gi|1709449|sp|P52902|ODPA_PEA RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha,
           mitochondrial; Short=PDHE1-A; Flags: Precursor
 gi|1263302|gb|AAA97411.1| pyruvate dehydrogenase E1 alpha subunit [Pisum sativum]
          Length = 397

 Score = 35.8 bits (82), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 125 SKISVRNIR--RDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDS 174
           ++  +  +R  RD ++ ++K   S    +E  +   E +++K  D  I     
Sbjct: 310 TRDEISGVRQERDPIERVRKLLLSHDIATEKELKDTEKEVRKEVDEAIAKAKD 362


>gi|82751005|ref|YP_416746.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           RF122]
 gi|123549163|sp|Q2YY05|ODO1_STAAB RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|82656536|emb|CAI80958.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           RF122]
          Length = 932

 Score = 35.8 bits (82), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 12/54 (22%)

Query: 131 NIRRDGMDHL-----KKSRKSGKASEDMVASLENDIQK----ITDSTIKNIDSF 175
           NIR+   D +     KK    G  SED + S    +QK      D  I   D  
Sbjct: 474 NIRK--NDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDK-INKADKM 524


>gi|157103376|ref|XP_001647951.1| tropomyosin, putative [Aedes aegypti]
 gi|108884174|gb|EAT48399.1| tropomyosin, putative [Aedes aegypti]
          Length = 448

 Score = 35.8 bits (82), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 38/96 (39%), Gaps = 23/96 (23%)

Query: 111 RLALVKV---AHAYAEKSKISVRNI---RRDGMDHLKKSRKSGKASEDM-------VASL 157
           R  ++K+    + Y   +K ++R +   R D    +    K+  +SED        +   
Sbjct: 230 REEVLKLQDEKYQYQNSAKDALRKVHQERLDATHKVATIEKALCSSEDECSLLREQLNKT 289

Query: 158 ENDIQKIT----------DSTIKNIDSFFEEKKKEI 183
           +  +Q++T          D  + + +   + K+ EI
Sbjct: 290 QLQLQEVTGRLDALQNQYDERVASSEEQLKVKESEI 325


>gi|562006|gb|AAA82975.1| PsHSP71.2 [Pisum sativum]
 gi|1771479|emb|CAA67867.1| heat shock protein hsp70 [Pisum sativum]
          Length = 648

 Score = 35.8 bits (82), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 14/92 (15%)

Query: 105 ETTEERRLALVKVAHAY-AE--------KSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
             ++E    +VK A  Y AE        ++K S+ N   +  + +K  +  GK S D   
Sbjct: 514 RLSKEEIEKMVKDAEKYKAEDEEVKRKVEAKNSLENYAYNMRNTIKDDKIGGKLSNDDRE 573

Query: 156 SLEN----DIQKITDSTIKNIDSFFEEKKKEI 183
            +E      IQ +  + +  ++  FE+K+KE+
Sbjct: 574 KIEKAVEEAIQWLEGNQLGEVEE-FEDKQKEL 604


>gi|73971692|ref|XP_538672.2| PREDICTED: hypothetical protein XP_538672 [Canis familiaris]
          Length = 954

 Score = 35.8 bits (82), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 14/75 (18%)

Query: 117 VAHAYAEKSKISV---RNIRRDGM---DHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
           V   Y E +++SV   RN+R + M   + +KK       S D  ++++  IQK+      
Sbjct: 186 VIQKYQENAQLSVKQVRNLRSECMEHQNQIKKVE-----SSDDESNIQEKIQKVRSLW-A 239

Query: 171 NIDS--FFEEKKKEI 183
           +++    + EK+KE+
Sbjct: 240 SVNETLIYLEKEKEV 254


>gi|292657174|ref|YP_003537070.1| Tat (twin-arginine translocation) pathway signal sequence domain
           protein [Haloferax volcanii DS2]
 gi|291373004|gb|ADE05230.1| Tat (twin-arginine translocation) pathway signal sequence domain
           protein [Haloferax volcanii DS2]
          Length = 344

 Score = 35.8 bits (82), Expect = 3.0,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 142 KSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           K  K+ + + D     ++++QK+T  + + +     +K+ E++  
Sbjct: 85  KEEKNKQENSDNGEKSDDNVQKMT-KSEQELRKEVSDKEGELLEV 128


>gi|297850898|ref|XP_002893330.1| IAA-conjugate-resistant 4 [Arabidopsis lyrata subsp. lyrata]
 gi|297339172|gb|EFH69589.1| IAA-conjugate-resistant 4 [Arabidopsis lyrata subsp. lyrata]
          Length = 393

 Score = 35.8 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 129 VRNIRRDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDS 174
           VR +R D ++ ++K   S    +E  +  +E +I+K  D  +     
Sbjct: 313 VRQVR-DPIERVRKLLLSHDIATEKELKDMEKEIRKEVDDAVAQAKE 358


>gi|149196439|ref|ZP_01873494.1| probable cytochrome c-type biogenesis protein [Lentisphaera
           araneosa HTCC2155]
 gi|149140700|gb|EDM29098.1| probable cytochrome c-type biogenesis protein [Lentisphaera
           araneosa HTCC2155]
          Length = 1131

 Score = 35.8 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 105 ETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASE--DMVASLENDIQ 162
           E  +E R   +    +  E+S+           + L K+ K  K +E       LE ++Q
Sbjct: 751 EINKEIRQTRLTAIKSELEESRTEFTK--TKANNELSKNEKDTKLTELSSQEHRLEGELQ 808


>gi|58220970|gb|AAW68151.1| gag protein [Human immunodeficiency virus 1]
          Length = 492

 Score = 35.8 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 17/91 (18%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP     +EG  Q++R   P     TEE R     VA  Y   ++I VR+  ++ +D +
Sbjct: 46  LNPGLLETLEGCKQIIRQLQPALQTGTEELRSLFNTVATLYCVHARIEVRDT-KEALDKI 104

Query: 141 -----KKSRKSGKASEDMVASLEND--IQKI 164
                K  +K+ +A +D     +N   +Q +
Sbjct: 105 EEEQNKSQQKTQQAKKDDGKISQNYPIVQNL 135


>gi|297475038|ref|XP_002687731.1| PREDICTED: myosin, heavy chain 9, non-muscle [Bos taurus]
 gi|296487363|gb|DAA29476.1| myosin, heavy chain 9, non-muscle [Bos taurus]
          Length = 1965

 Score = 35.8 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
               K   A  EK+K ++ N R +  + +K  ++    +E     +E  +Q++     +
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKVLQQGKADTEHKRKKVEAQLQELQVKFTE 1263


>gi|300795444|ref|NP_001179691.1| myosin, heavy chain 9, non-muscle [Bos taurus]
          Length = 1965

 Score = 35.8 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
               K   A  EK+K ++ N R +  + +K  ++    +E     +E  +Q++     +
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKVLQQGKADTEHKRKKVEAQLQELQVKFTE 1263


>gi|15234871|ref|NP_192733.1| avirulence-responsive family protein / avirulence induced gene
           (AIG1) family protein [Arabidopsis thaliana]
 gi|4538998|emb|CAB39619.1| AIG1-like protein [Arabidopsis thaliana]
 gi|7267691|emb|CAB78118.1| AIG1-like protein [Arabidopsis thaliana]
 gi|332657415|gb|AEE82815.1| AIG1-like protein [Arabidopsis thaliana]
          Length = 336

 Score = 35.8 bits (82), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 33/76 (43%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
             + +  L K  +   E  K  + N  ++ ++ +K+     +A  +      N+IQK++ 
Sbjct: 246 ISQMKKELEKSHNEMLEGIKEKISNQLKESLEDVKEQLAKAQAEREETEKKMNEIQKLSS 305

Query: 167 STIKNIDSFFEEKKKE 182
             I+ +     + +KE
Sbjct: 306 DEIRRLREQLNKAEKE 321


>gi|332231117|ref|XP_003264744.1| PREDICTED: myosin-9 isoform 1 [Nomascus leucogenys]
          Length = 1929

 Score = 35.8 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1213 EQTKRVKANLEKAKQTLENERGELANEVKVLLQGKGDSEHKRKKVEAQLQEL 1264


>gi|315129122|gb|EFT85117.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus CGS03]
          Length = 722

 Score = 35.8 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 8/52 (15%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK----ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK      D  I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDK-INKADKM 524


>gi|297708729|ref|XP_002831109.1| PREDICTED: LOW QUALITY PROTEIN: myosin-9-like [Pongo abelii]
          Length = 1960

 Score = 35.8 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKVLLQGKGDSEHKRKKVEAQLQEL 1257


>gi|296191774|ref|XP_002743773.1| PREDICTED: myosin-9 [Callithrix jacchus]
          Length = 1960

 Score = 35.8 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKVLLQGKGDSEHKRKKVEAQLQEL 1257


>gi|12667788|ref|NP_002464.1| myosin-9 [Homo sapiens]
 gi|6166599|sp|P35579|MYH9_HUMAN RecName: Full=Myosin-9; AltName: Full=Cellular myosin heavy chain,
            type A; AltName: Full=Myosin heavy chain 9; AltName:
            Full=Myosin heavy chain, non-muscle IIa; AltName:
            Full=Non-muscle myosin heavy chain A; Short=NMMHC-A;
            AltName: Full=Non-muscle myosin heavy chain IIa;
            Short=NMMHC II-a; Short=NMMHC-IIA
 gi|3169000|emb|CAB05105.1| myosin, heavy chain 9, non-muscle [Homo sapiens]
 gi|47678583|emb|CAG30412.1| MYH9 [Homo sapiens]
 gi|53791227|dbj|BAD52439.1| non-muscle myosin heavy polypeptide 9 [Homo sapiens]
 gi|109451392|emb|CAK54557.1| MYH9 [synthetic construct]
 gi|109451988|emb|CAK54856.1| MYH9 [synthetic construct]
 gi|119580500|gb|EAW60096.1| myosin, heavy polypeptide 9, non-muscle, isoform CRA_a [Homo sapiens]
 gi|119580502|gb|EAW60098.1| myosin, heavy polypeptide 9, non-muscle, isoform CRA_a [Homo sapiens]
 gi|152012654|gb|AAI50170.1| Myosin, heavy chain 9, non-muscle [synthetic construct]
 gi|152012993|gb|AAI50171.1| Myosin, heavy chain 9, non-muscle [synthetic construct]
 gi|166788562|dbj|BAG06729.1| MYH9 variant protein [Homo sapiens]
 gi|168270842|dbj|BAG10214.1| myosin-9 [synthetic construct]
          Length = 1960

 Score = 35.8 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKVLLQGKGDSEHKRKKVEAQLQEL 1257


>gi|329733439|gb|EGG69771.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 932

 Score = 35.8 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|298694708|gb|ADI97930.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 932

 Score = 35.8 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 8/52 (15%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK----ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK      D  I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDK-INKADKM 524


>gi|332231119|ref|XP_003264745.1| PREDICTED: myosin-9 isoform 2 [Nomascus leucogenys]
          Length = 1922

 Score = 35.8 bits (82), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKVLLQGKGDSEHKRKKVEAQLQEL 1257


>gi|321265235|ref|XP_003197334.1| hypothetical protein CGB_M2230C [Cryptococcus gattii WM276]
 gi|317463813|gb|ADV25547.1| Hypothetical Protein CGB_M2230C [Cryptococcus gattii WM276]
          Length = 679

 Score = 35.4 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 20/74 (27%)

Query: 108 EERRLALVK-----VAHAYAEKSKISV-RNIRR--------------DGMDHLKKSRKSG 147
            ER L L       +     E+ KI + R +R               D    +++  K  
Sbjct: 155 MERILELADGQSKALLKKRLEEMKIHIERQVRAESCQRITQLENALADSHQDIRRLEKEK 214

Query: 148 KASEDMVASLENDI 161
              ED +  +E  I
Sbjct: 215 IILEDTMKEVEERI 228


>gi|311255169|ref|XP_003126114.1| PREDICTED: LOW QUALITY PROTEIN: myosin-9 [Sus scrofa]
          Length = 1967

 Score = 35.4 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113  ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
               K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 1206 EQTKRVKANLEKAKQTLENERGELANEVKVLLQGKGDSEHKRKKVEAQLQEM 1257


>gi|261289639|ref|XP_002604796.1| hypothetical protein BRAFLDRAFT_276977 [Branchiostoma floridae]
 gi|229290124|gb|EEN60806.1| hypothetical protein BRAFLDRAFT_276977 [Branchiostoma floridae]
          Length = 371

 Score = 35.4 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 8/67 (11%)

Query: 127 ISVRNIRRDGMDHLKKSRKSGKASEDMVASLEND----IQKITDSTIKNIDS---FFEEK 179
             +R   R+     +    + K +ED +   +      IQK+ D+    +D      ++K
Sbjct: 215 DKLRRRMRETFQQAQAEMDALKRTEDDLKKGQRQLDEMIQKL-DTECVEVDKNVQLLKQK 273

Query: 180 KKEIMHF 186
            +EI   
Sbjct: 274 DEEIKEV 280


>gi|126697991|ref|YP_001086888.1| putative cell surface protein [Clostridium difficile 630]
 gi|115249428|emb|CAJ67243.1| putative cell surface protein Tn1549-like,CTn2-Orf15 [Clostridium
           difficile]
          Length = 513

 Score = 35.4 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           K     ++K K  ++++  D +D LK+  K  K ++D+   ++ +I K+T+  +K ++ 
Sbjct: 175 KDKDKLSDKQKNKIKDLE-DEIDSLKEKIKKDKGNKDLSKDMKKEIDKLTEK-VKELEK 231


>gi|329314091|gb|AEB88504.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus T0131]
          Length = 932

 Score = 35.4 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|302333026|gb|ADL23219.1| oxoglutarate dehydrogenase (succinyl-transferring) E1
           [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 932

 Score = 35.4 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|15926993|ref|NP_374526.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus N315]
 gi|81781609|sp|Q99U74|ODO1_STAAN RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|13701210|dbj|BAB42505.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus subsp.
           aureus N315]
 gi|32399940|emb|CAD92217.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399942|emb|CAD92218.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399944|emb|CAD92219.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399946|emb|CAD92220.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399948|emb|CAD92221.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399950|emb|CAD92222.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399952|emb|CAD92223.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399954|emb|CAD92224.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399956|emb|CAD92225.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399958|emb|CAD92226.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399960|emb|CAD92227.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399962|emb|CAD92228.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
          Length = 910

 Score = 35.4 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 452 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 502


>gi|49486254|ref|YP_043475.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57651914|ref|YP_186301.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus COL]
 gi|87159912|ref|YP_494003.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|88195143|ref|YP_499944.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|151221538|ref|YP_001332360.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|161509578|ref|YP_001575237.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|258452755|ref|ZP_05700752.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A5948]
 gi|282927661|ref|ZP_06335276.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A9765]
 gi|284024413|ref|ZP_06378811.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus 132]
 gi|294850785|ref|ZP_06791501.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9754]
 gi|297207930|ref|ZP_06924363.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300912014|ref|ZP_07129457.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304381009|ref|ZP_07363665.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|81649322|sp|Q6G9E8|ODO1_STAAS RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|81694511|sp|Q5HG06|ODO1_STAAC RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|122539579|sp|Q2FYM1|ODO1_STAA8 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|123485964|sp|Q2FH25|ODO1_STAA3 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|172048882|sp|A6QGW6|ODO1_STAAE RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|189029261|sp|A8Z3Z0|ODO1_STAAT RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|49244697|emb|CAG43131.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57286100|gb|AAW38194.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus
           subsp. aureus COL]
 gi|87125886|gb|ABD20400.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|87202701|gb|ABD30511.1| 2-oxoglutarate dehydrogenase, E1 component [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|150374338|dbj|BAF67598.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|160368387|gb|ABX29358.1| oxoglutarate dehydrogenase (succinyl-transferring) E1
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|257859568|gb|EEV82419.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A5948]
 gi|269940908|emb|CBI49292.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus TW20]
 gi|282592050|gb|EFB97077.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A9765]
 gi|283470628|emb|CAQ49839.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus ST398]
 gi|294822360|gb|EFG38813.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9754]
 gi|296887504|gb|EFH26404.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300886260|gb|EFK81462.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304340453|gb|EFM06391.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|315195876|gb|EFU26243.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320139561|gb|EFW31431.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142169|gb|EFW33987.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus MRSA177]
 gi|329730554|gb|EGG66940.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus 21189]
          Length = 932

 Score = 35.4 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|253732050|ref|ZP_04866215.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253724212|gb|EES92941.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
          Length = 932

 Score = 35.4 bits (81), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|57634631|ref|NP_371937.2| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|148267901|ref|YP_001246844.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus JH9]
 gi|150393964|ref|YP_001316639.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus JH1]
 gi|156979732|ref|YP_001441991.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|253315264|ref|ZP_04838477.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus str. CF-Marseille]
 gi|253733340|ref|ZP_04867505.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006202|ref|ZP_05144803.2| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus Mu50-omega]
 gi|257795532|ref|ZP_05644511.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A9781]
 gi|258413340|ref|ZP_05681616.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9763]
 gi|258420553|ref|ZP_05683495.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A9719]
 gi|258434675|ref|ZP_05688749.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9299]
 gi|258444749|ref|ZP_05693078.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8115]
 gi|258447416|ref|ZP_05695560.1| oxoglutarate dehydrogenase [Staphylococcus aureus A6300]
 gi|258449257|ref|ZP_05697360.1| oxoglutarate dehydrogenase [Staphylococcus aureus A6224]
 gi|258454637|ref|ZP_05702601.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A5937]
 gi|269203036|ref|YP_003282305.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282892907|ref|ZP_06301142.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A8117]
 gi|282927938|ref|ZP_06335547.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A10102]
 gi|295406360|ref|ZP_06816167.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8819]
 gi|296275273|ref|ZP_06857780.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus MR1]
 gi|297244589|ref|ZP_06928472.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8796]
 gi|81774913|sp|Q931R8|ODO1_STAAM RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|166215766|sp|A7X295|ODO1_STAA1 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|189029259|sp|A6U1N4|ODO1_STAA2 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|189029260|sp|A5ISU5|ODO1_STAA9 RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|46395526|dbj|BAB57575.2| oxoglutarate dehydrogenase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147740970|gb|ABQ49268.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149946416|gb|ABR52352.1| 2-oxoglutarate dehydrogenase, E1 subunit [Staphylococcus aureus
           subsp. aureus JH1]
 gi|156721867|dbj|BAF78284.1| oxoglutarate dehydrogenase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253728692|gb|EES97421.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257789504|gb|EEV27844.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A9781]
 gi|257839904|gb|EEV64372.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9763]
 gi|257843501|gb|EEV67908.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A9719]
 gi|257849036|gb|EEV73018.1| oxoglutarate dehydrogenase [Staphylococcus aureus A9299]
 gi|257850242|gb|EEV74195.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8115]
 gi|257853607|gb|EEV76566.1| oxoglutarate dehydrogenase [Staphylococcus aureus A6300]
 gi|257857245|gb|EEV80143.1| oxoglutarate dehydrogenase [Staphylococcus aureus A6224]
 gi|257863020|gb|EEV85784.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A5937]
 gi|262075326|gb|ACY11299.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282590235|gb|EFB95315.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A10102]
 gi|282764904|gb|EFC05029.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus A8117]
 gi|285817091|gb|ADC37578.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           04-02981]
 gi|294968948|gb|EFG44970.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8819]
 gi|297178619|gb|EFH37865.1| oxoglutarate dehydrogenase [Staphylococcus aureus A8796]
 gi|312829808|emb|CBX34650.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|329727040|gb|EGG63496.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus 21172]
          Length = 932

 Score = 35.4 bits (81), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|323438698|gb|EGA96440.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           O11]
 gi|323444067|gb|EGB01678.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           O46]
          Length = 932

 Score = 35.4 bits (81), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|126305909|ref|XP_001377868.1| PREDICTED: similar to guanylate binding protein 1 [Monodelphis
           domestica]
          Length = 705

 Score = 35.4 bits (81), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 110 RRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
           R   + K   A+ E+ K   +N+R    D +K+  K  + + D + SL   IQ++
Sbjct: 511 RNQEMQKQDTAFQEEMKDETKNMR----DEVKRKEKDDQKARDEIQSLRTRIQQL 561


>gi|283770484|ref|ZP_06343376.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus H19]
 gi|283460631|gb|EFC07721.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus H19]
          Length = 932

 Score = 35.4 bits (81), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|21283032|ref|NP_646120.1| 2-oxoglutarate dehydrogenase E1 component [Staphylococcus aureus
           subsp. aureus MW2]
 gi|81762510|sp|Q8NWR6|ODO1_STAAW RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|21204471|dbj|BAB95168.1| oxoglutarate dehydrogenase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|32399926|emb|CAD92210.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399928|emb|CAD92211.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399930|emb|CAD92212.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399932|emb|CAD92213.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399934|emb|CAD92214.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399936|emb|CAD92215.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399938|emb|CAD92216.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
          Length = 932

 Score = 35.4 bits (81), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|308503709|ref|XP_003114038.1| CRE-NHR-139 protein [Caenorhabditis remanei]
 gi|308261423|gb|EFP05376.1| CRE-NHR-139 protein [Caenorhabditis remanei]
          Length = 609

 Score = 35.4 bits (81), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASE-------DMVASLENDIQKITDSTI 169
            +E      RNIR+  +  LK  +     SE       D +  LE   QK+ +  +
Sbjct: 532 ISEDGAKLCRNIRKVILRELKGYQDDKNCSEMRLADTIDTLRLLEKAEQKLQEEFV 587


>gi|221142646|ref|ZP_03567139.1| alpha-ketoglutarate decarboxylase [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|302751243|gb|ADL65420.1| oxoglutarate dehydrogenase (succinyl-transferring) E1
           [Staphylococcus aureus subsp. aureus str. JKD6008]
          Length = 932

 Score = 35.4 bits (81), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|85105830|ref|XP_962046.1| hypothetical protein NCU08835 [Neurospora crassa OR74A]
 gi|28923639|gb|EAA32810.1| predicted protein [Neurospora crassa OR74A]
          Length = 569

 Score = 35.4 bits (81), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 109 ERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST 168
           E      ++A  Y +  K S R  +R    H ++  K+ + S+  V  LE  I+ +    
Sbjct: 500 ELVQECSRLAKKYTQIRKKSEREAKRMEKKHRRELEKTKRKSKKEVKRLEKKIESL---- 555

Query: 169 IKNIDSFFEEKKK 181
            K +       + 
Sbjct: 556 EKEVLKALAGPEA 568


>gi|282916680|ref|ZP_06324438.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus D139]
 gi|282319167|gb|EFB49519.1| oxoglutarate dehydrogenase (succinyl-transferring), E1 component
           [Staphylococcus aureus subsp. aureus D139]
          Length = 932

 Score = 35.4 bits (81), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|52080256|ref|YP_079047.1| undecaprenyl pyrophosphate synthase [Bacillus licheniformis ATCC
           14580]
 gi|52785633|ref|YP_091462.1| hypothetical protein BLi01874 [Bacillus licheniformis ATCC 14580]
 gi|319645964|ref|ZP_08000194.1| UppS protein [Bacillus sp. BT1B_CT2]
 gi|52003467|gb|AAU23409.1| undecaprenyl pyrophosphate synthetase [Bacillus licheniformis ATCC
           14580]
 gi|52348135|gb|AAU40769.1| UppS [Bacillus licheniformis ATCC 14580]
 gi|317391714|gb|EFV72511.1| UppS protein [Bacillus sp. BT1B_CT2]
          Length = 260

 Score = 35.4 bits (81), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 8/54 (14%)

Query: 73  KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSK 126
              + +VE+ I ++        +G +L           R  +V+ A   AE++K
Sbjct: 132 PHTIRAVEKAIRDTE-----NNDGLILNF---ALNYGGRAEIVRAAKKIAEEAK 177


>gi|166215767|sp|P0C601|ODO1_STAAU RecName: Full=2-oxoglutarate dehydrogenase E1 component; AltName:
           Full=Alpha-ketoglutarate dehydrogenase
 gi|32399898|emb|CAD92196.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399900|emb|CAD92197.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399902|emb|CAD92198.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399904|emb|CAD92199.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399906|emb|CAD92200.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399908|emb|CAD92201.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399910|emb|CAD92202.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399912|emb|CAD92203.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399914|emb|CAD92204.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399916|emb|CAD92205.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399918|emb|CAD92206.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399920|emb|CAD92207.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399922|emb|CAD92208.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
 gi|32399924|emb|CAD92209.1| 2-oxoglutarate dehydrogenase E1 [Staphylococcus aureus]
          Length = 932

 Score = 35.4 bits (81), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 131 NIRR-DGMDHL--KKSRKSGKASEDMVASLENDIQK---ITDSTIKNIDSF 175
           NIR+ D ++++  KK    G  SED + S    +QK        I   D  
Sbjct: 474 NIRKHDSVEYVFGKKLVNEGVISEDEMHSFIEQVQKELRQAHDKINKADKM 524


>gi|256273929|gb|EEU08848.1| Smc5p [Saccharomyces cerevisiae JAY291]
          Length = 1093

 Score = 35.4 bits (81), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 13/76 (17%)

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
              + +     E++K ++R I            K  K   +   +LEN ++++T+     
Sbjct: 279 KEKLNIYKEEYERAKANLRAI-----------LKDKKPFANTKKTLENQVEELTEKCSLK 327

Query: 172 IDSFFEEKKK--EIMH 185
            D F + K+K  EI  
Sbjct: 328 TDEFLKAKEKINEIFE 343


>gi|298489942|ref|YP_003720119.1| multi-sensor signal transduction histidine kinase ['Nostoc azollae'
           0708]
 gi|298231860|gb|ADI62996.1| multi-sensor signal transduction histidine kinase ['Nostoc azollae'
           0708]
          Length = 1138

 Score = 35.4 bits (81), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 11/82 (13%)

Query: 55  VANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLAL 114
           +A++T+ +  +  V+   + M       +   N  L    +     I  P          
Sbjct: 659 IADITIPDGSITYVNPAFERMTGYTAAEVMRQNFRLFLGAD-----INQPAL------EQ 707

Query: 115 VKVAHAYAEKSKISVRNIRRDG 136
           +K+A    +  K+ +RN R+DG
Sbjct: 708 MKIAMQTGQDCKVILRNYRKDG 729


>gi|30025966|gb|AAP04522.1| heat shock protein 70 [Nicotiana tabacum]
          Length = 648

 Score = 35.4 bits (81), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 14/92 (15%)

Query: 105 ETTEERRLALVKVAHAY-AE--------KSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
             ++E    +V+ A  Y AE        ++K ++ N   +  + +K  +   K S D   
Sbjct: 515 RLSKEEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTIKDEKIGSKLSSDDKK 574

Query: 156 SLENDIQK----ITDSTIKNIDSFFEEKKKEI 183
            +E+ I +    +  + +   D  FE+K KE+
Sbjct: 575 KIEDAIDQAISWLDSNQLAEADE-FEDKMKEL 605


>gi|242029780|gb|ACS76917.1| gag protein [Human immunodeficiency virus 1]
          Length = 454

 Score = 35.4 bits (81), Expect = 3.8,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP     +EG  Q+++  +P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 29  LNPGLLETLEGCKQIIKQLLPALQTGTEEIRSLYNTVATLYCVHAKIEVRDT-KEALDKI 87

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+    ++  +Q  ++ D 
Sbjct: 88  ----------EEEQKQVQQKMQPTEMADK 106


>gi|85706318|ref|ZP_01037412.1| valyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85669091|gb|EAQ23958.1| valyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 1033

 Score = 35.4 bits (81), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 6/50 (12%)

Query: 1    MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVS-----PSMLDLVKVEA 45
            +  +ID+   K R+  T++ L+K++  LR GR++      S  + V VEA
Sbjct: 960  LADIIDVAEEKARLEKTLTKLEKELGGLR-GRLNNPNFVASAPEEVVVEA 1008


>gi|325570641|ref|ZP_08146367.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Enterococcus casseliflavus ATCC 12755]
 gi|325156487|gb|EGC68667.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Enterococcus casseliflavus ATCC 12755]
          Length = 1140

 Score = 35.4 bits (81), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 102 PVPETTEERRLALVKVAHAYAEKSKISVRN-------IRRDGMDHLKKSRKSG-KASEDM 153
            +    + RR  L+  A    +++K  +RN        +R+  D  +K  ++  + +E  
Sbjct: 242 KLAPLAQGRRQELIDEAQPAIDEAKEQIRNGETALQEAQRELDDAQEKLAQAHRELTEQE 301

Query: 154 VASLENDIQKITDSTIKNIDSFFEEKKK 181
             + + +IQ   +          E K+ 
Sbjct: 302 A-AFQTEIQAAQEQLNSEAQKIAEGKQA 328


>gi|160331065|ref|XP_001712240.1| hsp70 [Hemiselmis andersenii]
 gi|159765687|gb|ABW97915.1| hsp70 [Hemiselmis andersenii]
          Length = 650

 Score = 35.4 bits (81), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 28/102 (27%)

Query: 105 ETTEERRLALVKVA---HAYAEKSKISVR----------NIRRDGMDHLKKSRKSGKASE 151
             ++E    +V+ A       EK++  +           NIR    + +K  +   K SE
Sbjct: 516 RLSKEDIERMVEEAEKYKHEDEKTRQKIEAKNSLENYAYNIR----NTIKDEKIKDKISE 571

Query: 152 DMVASLENDIQKITDSTIKNID-------SFFEEKKKEIMHF 186
           D    +E      T+  I  I+         +E+K+ E+   
Sbjct: 572 DEKKIIEEK----TNEIISAIENDESLEKEDYEKKENELKEI 609


>gi|9507327|ref|NP_040423.1| hypothetical protein pLS1_p4 [Plasmid pLS1]
 gi|149701|gb|AAA98168.1| ORFD [Plasmid pLS1]
          Length = 299

 Score = 35.4 bits (81), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +R+   + LKK   S K  ED ++ LE  + K T   IK IDS   E+  E+
Sbjct: 62  LRKQYQEELKKLESSKKPLEDDLSHLEELLDKKTKEYIK-IDSEASERASEL 112


>gi|207341356|gb|EDZ69438.1| YOL034Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259149451|emb|CAY86255.1| Smc5p [Saccharomyces cerevisiae EC1118]
          Length = 1093

 Score = 35.4 bits (81), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 13/76 (17%)

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
              + +     E++K ++R I            K  K   +   +LEN ++++T+     
Sbjct: 279 KEKLNIYKEEYERAKANLRAI-----------LKDKKPFANTKKTLENQVEELTEKCSLK 327

Query: 172 IDSFFEEKKK--EIMH 185
            D F + K+K  EI  
Sbjct: 328 TDEFLKAKEKINEIFE 343


>gi|242029832|gb|ACS76943.1| gag protein [Human immunodeficiency virus 1]
          Length = 456

 Score = 35.4 bits (81), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP      EG  Q+++  +P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 31  LNPGLLETAEGCKQLIKQLLPALQTGTEELRSLYNTVATLYCVHAKIEVRDT-KEALDKI 89

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+    ++  +Q  ++ D 
Sbjct: 90  ----------EEEQKQVQQKMQPTEMADK 108


>gi|190407309|gb|EDV10576.1| structural maintenance of chromosome 5 [Saccharomyces cerevisiae
           RM11-1a]
          Length = 1093

 Score = 35.4 bits (81), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 13/76 (17%)

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
              + +     E++K ++R I            K  K   +   +LEN ++++T+     
Sbjct: 279 KEKLNIYKEEYERAKANLRAI-----------LKDKKPFANTKKTLENQVEELTEKCSLK 327

Query: 172 IDSFFEEKKK--EIMH 185
            D F + K+K  EI  
Sbjct: 328 TDEFLKAKEKINEIFE 343


>gi|6324539|ref|NP_014608.1| Smc5p [Saccharomyces cerevisiae S288c]
 gi|74627239|sp|Q08204|SMC5_YEAST RecName: Full=Structural maintenance of chromosomes protein 5
 gi|1419827|emb|CAA99034.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|285814854|tpg|DAA10747.1| TPA: Smc5p [Saccharomyces cerevisiae S288c]
          Length = 1093

 Score = 35.4 bits (81), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 13/76 (17%)

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
              + +     E++K ++R I            K  K   +   +LEN ++++T+     
Sbjct: 279 KEKLNIYKEEYERAKANLRAI-----------LKDKKPFANTKKTLENQVEELTEKCSLK 327

Query: 172 IDSFFEEKKK--EIMH 185
            D F + K+K  EI  
Sbjct: 328 TDEFLKAKEKINEIFE 343


>gi|134298387|ref|YP_001111883.1| helicase domain-containing protein [Desulfotomaculum reducens MI-1]
 gi|134051087|gb|ABO49058.1| helicase domain protein [Desulfotomaculum reducens MI-1]
          Length = 942

 Score = 35.4 bits (81), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 112 LALVKVAHAYAEKSKISVRNIRR-DGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK 170
             L K       K+ ++V    +      LK   K        +   +++I +  D  I 
Sbjct: 860 KELDKELKELRRKATVAVSLAEKLAAQKELKIQEKKRTQKRRQLYDAQDEIDERRDELIA 919

Query: 171 NIDSFFEEKKK-EIM 184
            I+    +K+K E++
Sbjct: 920 GIERLMLQKQKVEVL 934


>gi|242029834|gb|ACS76944.1| gag protein [Human immunodeficiency virus 1]
          Length = 456

 Score = 35.4 bits (81), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP      EG  Q+++  +P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 31  LNPGLLETAEGCKQLIKQLLPALQTGTEELRSLYNTVATLYCVHAKIEVRDT-KEALDKI 89

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+    ++  +Q  ++ D 
Sbjct: 90  ----------EEEQKQVQQKMQPTEMADK 108


>gi|186682973|ref|YP_001866169.1| GAF sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
 gi|186465425|gb|ACC81226.1| GAF sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
          Length = 2198

 Score = 35.4 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 110  RRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTI 169
            R   L+K + + AE+ +   +N  R+    L++  +S K SED++   + ++Q+ T++ +
Sbjct: 1430 RTEELLKQSQSLAEELQTQ-QNELRETNKRLEQQAQSLKTSEDLLKGQQEELQQ-TNAEL 1487

Query: 170  KNIDSFFEEKKKEI 183
            +        +KKE+
Sbjct: 1488 EEKAELLAMQKKEV 1501


>gi|38325815|gb|AAR17080.1| heat shock protein 70-3 [Nicotiana tabacum]
          Length = 648

 Score = 35.4 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 14/92 (15%)

Query: 105 ETTEERRLALVKVAHAY-AE--------KSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
             ++E    +V+ A  Y AE        ++K ++ N   +  + +K  +   K S D   
Sbjct: 515 RLSKEEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTIKDEKIGSKLSSDDKK 574

Query: 156 SLENDIQK----ITDSTIKNIDSFFEEKKKEI 183
            +E+ I +    +  + +   D  FE+K KE+
Sbjct: 575 KIEDAIDQAISWLDSNQLAEADE-FEDKMKEL 605


>gi|242029838|gb|ACS76946.1| gag protein [Human immunodeficiency virus 1]
          Length = 456

 Score = 35.4 bits (81), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP      EG  Q+++  +P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 31  LNPGLLETAEGCKQLIKQLLPALQTGTEELRSLYNTVATLYCVHAKIEVRDT-KEALDKI 89

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+    ++  +Q  ++ D 
Sbjct: 90  ----------EEEQKQVQQKMQPTEMADK 108


>gi|301631117|ref|XP_002944653.1| PREDICTED: myomegalin-like [Xenopus (Silurana) tropicalis]
          Length = 331

 Score = 35.0 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 102 PVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
            +P+ + E R              ++ +  I RD    L+  +K   +S   + ++E D+
Sbjct: 87  SLPQLSNENR-----ALREENLSLQVRINQISRDYFKELENLQKLLSSSRAQLKNVETDL 141

Query: 162 QKITDSTIKNIDSFFEEKKKEIMHF 186
           ++ T  + K +    ++K++EI+H 
Sbjct: 142 EQKTQES-KKLQEELDQKQQEILHL 165


>gi|161408081|dbj|BAF94144.1| heat shock protein 70C [Alligator mississippiensis]
          Length = 672

 Score = 35.0 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 19/95 (20%)

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGK-------- 148
           Q++       +++    +VK A  YAE+ +   R  R + ++  +      +        
Sbjct: 543 QIVIQSSGGLSKDEIENMVKNAEKYAEEDRR--RKERVEAVNMAEGIIHDSESKMEEFKN 600

Query: 149 -ASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
              ED    L+ +        I  +      K  E
Sbjct: 601 QLPEDECNKLKEE--------IAKMRELLARKDTE 627


>gi|153939381|ref|YP_001392471.1| TP901 family phage tail tape measure protein [Clostridium botulinum F
            str. Langeland]
 gi|152935277|gb|ABS40775.1| phage tail tape measure protein, TP901 family [Clostridium botulinum
            F str. Langeland]
          Length = 1826

 Score = 35.0 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 20/91 (21%)

Query: 112  LALVKVAHAYAEKSKI-------SVRNIRRDGMDHLKKSRKS-----GKASEDMVASLEN 159
               VK A    E +++       +V++  ++  D++ K ++       +  ED +   E 
Sbjct: 1512 EETVK-AREEFENARVELENMANAVKDAAKNLSDYIDKFKQDIANALKERYEDELKLQEE 1570

Query: 160  DI-------QKITDSTIKNIDSFFEEKKKEI 183
             I       +K  D +IK ID  ++ K K I
Sbjct: 1571 SINSQIQNLEKWKDESIKRIDDVYDAKIKAI 1601


>gi|242029750|gb|ACS76902.1| gag protein [Human immunodeficiency virus 1]
          Length = 454

 Score = 35.0 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP      EG  Q+++  +P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 29  LNPGLLETAEGCKQLIKQLLPALQTGTEELRSLYNTVATLYCVHAKIEVRDT-KEALDKI 87

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+    ++  +Q  ++ D 
Sbjct: 88  ----------EEEQKQVQQKMQPTEMADK 106


>gi|317064482|ref|ZP_07928967.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
 gi|313690158|gb|EFS26993.1| conserved hypothetical protein [Fusobacterium ulcerans ATCC 49185]
          Length = 229

 Score = 35.0 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 138 DHLKKSRKSGKASED--MVASLENDIQKITDSTIKNIDSFFEEKKKE 182
             +KK +K     ED   + SL + I  I    IK I+   ++K+KE
Sbjct: 165 KRIKKMKKRVDKIEDPKELKSLVDKIS-IYKKEIKEIEQLLKDKEKE 210


>gi|261332474|emb|CBH15469.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 413

 Score = 35.0 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 9/72 (12%)

Query: 105 ETTEERRLALVKVAHA-----YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEN 159
           +  EE+R AL            A + K  +  IRR+    L+  RK  +  +D+ A    
Sbjct: 168 KMEEEKRQALEDERKRVSMGRKAIEVKEELDKIRREA--ELEAVRKQKQ--QDLAARRRV 223

Query: 160 DIQKITDSTIKN 171
            IQ +TD  I+ 
Sbjct: 224 RIQILTDKFIRE 235


>gi|151945597|gb|EDN63838.1| structural maintenance of chromosomes [Saccharomyces cerevisiae
           YJM789]
          Length = 1093

 Score = 35.0 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 13/76 (17%)

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
              + +     E++K ++R I            K  K   +   +LEN ++++T+     
Sbjct: 279 KEKLNIYKEEYERAKANLRAI-----------LKDKKPFANTKKTLENQVEELTEKCSLK 327

Query: 172 IDSFFEEKKK--EIMH 185
            D F + K+K  EI  
Sbjct: 328 TDEFLKAKEKINEIFE 343


>gi|257470271|ref|ZP_05634362.1| hypothetical protein FulcA4_13087 [Fusobacterium ulcerans ATCC
           49185]
          Length = 234

 Score = 35.0 bits (80), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 138 DHLKKSRKSGKASED--MVASLENDIQKITDSTIKNIDSFFEEKKKE 182
             +KK +K     ED   + SL + I  I    IK I+   ++K+KE
Sbjct: 170 KRIKKMKKRVDKIEDPKELKSLVDKIS-IYKKEIKEIEQLLKDKEKE 215


>gi|296005416|ref|XP_002809030.1| SNARE protein, putative [Plasmodium falciparum 3D7]
 gi|109692333|gb|ABG38003.1| SNARE protein [Plasmodium falciparum]
 gi|225631972|emb|CAX64311.1| SNARE protein, putative [Plasmodium falciparum 3D7]
          Length = 221

 Score = 35.0 bits (80), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 36/79 (45%), Gaps = 7/79 (8%)

Query: 112 LALVKVAHAYAEKSKISVRN---IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST 168
               +      E  +  ++    I+ +  D LKK +   +A  D ++ ++ D+ ++ D  
Sbjct: 119 KLFAQKCRGMYEHVRQDLKEGMLIQNELNDLLKKYQNPSEA--DKLSRVQKDLDEVKDVM 176

Query: 169 IKNIDSFFEEKKK--EIMH 185
           +KNI+   +  +K  ++M 
Sbjct: 177 LKNIEDLLQRGEKLDDLMK 195


>gi|332520906|ref|ZP_08397366.1| hypothetical protein LacalDRAFT_1979 [Lacinutrix algicola 5H-3-7-4]
 gi|332043436|gb|EGI79632.1| hypothetical protein LacalDRAFT_1979 [Lacinutrix algicola 5H-3-7-4]
          Length = 1066

 Score = 35.0 bits (80), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 15/73 (20%)

Query: 105 ETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
           ++ E+ R  +       AE  K +         +  KK       S       + +I K 
Sbjct: 917 KSIEDLRQTMANATKQLAESKKTA---------EKFKK-----NLSSLDKKKYKEEI-KA 961

Query: 165 TDSTIKNIDSFFE 177
           +   IK ID  F 
Sbjct: 962 SKEIIKQIDEQFA 974


>gi|302680831|ref|XP_003030097.1| hypothetical protein SCHCODRAFT_110511 [Schizophyllum commune H4-8]
 gi|300103788|gb|EFI95194.1| hypothetical protein SCHCODRAFT_110511 [Schizophyllum commune H4-8]
          Length = 938

 Score = 35.0 bits (80), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 36/86 (41%), Gaps = 12/86 (13%)

Query: 100 RIPVPETTE-ERRLALVKVAHAYAEKSKISVRNIRRDGM---DHLKKSRKSGKASEDMVA 155
           R   P +   + +  L K+    AE + +  +N + + +   +  K+  K G+ +     
Sbjct: 197 RATTPASISADVQDELEKL---RAELAIVKQKNAQAEAILLEEKSKRWGKDGEIA----- 248

Query: 156 SLENDIQKITDSTIKNIDSFFEEKKK 181
            L++ + K T + I   +   E K+ 
Sbjct: 249 HLKDTLSKTTANYIAQTNKLREAKEA 274


>gi|117950009|gb|ABK58389.1| pol protein [Human immunodeficiency virus 1]
          Length = 342

 Score = 35.0 bits (80), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 18/98 (18%)

Query: 39  DLVKVEAYGSHVPLNQVANVTV-LEPRMLVVSVWDKEMVASV-------ERGIHESNLGL 90
           D + VE YG       +  V V   P    V++  + M+  +          I    + L
Sbjct: 60  DQILVEIYGKK----ALGTVLVGPTP----VNIIGRNMLTQIGCTLNFPISPIETVPVKL 111

Query: 91  NPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
            P ++G  ++      TEE+  AL  +     E+ KIS
Sbjct: 112 KPGMDGPKVKQW--PLTEEKIKALTAICKEMEEEGKIS 147


>gi|327262499|ref|XP_003216061.1| PREDICTED: basic leucine zipper transcriptional factor ATF-like
           3-like [Anolis carolinensis]
          Length = 115

 Score = 35.0 bits (80), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           EK++++ +  R+       K  +  +  E    SL+ +I K+TD  +K+++      +K
Sbjct: 32  EKNRVAAQRSRKKQTQKADKLHEEYECLEQENTSLKKEISKLTDE-LKHLNEVLRNHEK 89


>gi|242029758|gb|ACS76906.1| gag protein [Human immunodeficiency virus 1]
          Length = 454

 Score = 35.0 bits (80), Expect = 4.8,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP      EG  Q+++  +P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 29  LNPGLLETAEGCKQLIKQLLPALQTGTEELRSLYNTVATLYCVHAKIEVRDT-KEALDKI 87

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+    ++  +Q  ++ D 
Sbjct: 88  ----------EEEQKQVQQKMQPTEMADK 106


>gi|291223764|ref|XP_002731878.1| PREDICTED: tripartite motif protein 2-like [Saccoglossus
           kowalevskii]
          Length = 807

 Score = 35.0 bits (80), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 13/70 (18%)

Query: 122 AEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQ--------KITDSTIKNID 173
           AE+ K  ++N+    ++ LK   K  +  +    +  ++IQ        KITD     I+
Sbjct: 201 AEEYKRQLKNL----LEQLKAKEKQLEMKKAAAKNTPDEIQTHCEAEKKKITDKATGVIE 256

Query: 174 SFFEEKKKEI 183
               + +KE+
Sbjct: 257 KVRSD-EKEL 265


>gi|154320842|ref|XP_001559737.1| hypothetical protein BC1G_01893 [Botryotinia fuckeliana B05.10]
 gi|150853582|gb|EDN28774.1| hypothetical protein BC1G_01893 [Botryotinia fuckeliana B05.10]
          Length = 508

 Score = 35.0 bits (80), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 6/62 (9%)

Query: 100 RIPVPET----TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
           R+P+P        E R  ++    + AE  K+ V  I +  ++ L    K  +  +D V 
Sbjct: 364 RLPIPTNFGDGDNESRTEIIARGKSKAEGGKVEV--ISQKALEQLDLDPKMIEKLQDEVK 421

Query: 156 SL 157
            L
Sbjct: 422 KL 423


>gi|123613|sp|P24629|HSP71_SOLLC RecName: Full=Heat shock cognate 70 kDa protein 1
 gi|19256|emb|CAA37970.1| heat shock protein cognate 70 [Solanum lycopersicum]
          Length = 650

 Score = 35.0 bits (80), Expect = 4.9,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 14/92 (15%)

Query: 105 ETTEERRLALVKVAHAY-AE--------KSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
             ++E    +V+ A  Y AE        ++K S+ N   +  + +K  +   K S D   
Sbjct: 517 RLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKK 576

Query: 156 SLENDIQK----ITDSTIKNIDSFFEEKKKEI 183
            +E+ + +    +  + +  +D  FE+K KE+
Sbjct: 577 KIEDAVDQAISWLESNQLAEVDE-FEDKMKEL 607


>gi|262202013|ref|YP_003273221.1| chromosome segregation protein SMC [Gordonia bronchialis DSM 43247]
 gi|262085360|gb|ACY21328.1| chromosome segregation protein SMC [Gordonia bronchialis DSM 43247]
          Length = 1217

 Score = 35.0 bits (80), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 18/106 (16%)

Query: 80  ERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS------VRNIR 133
           E+ + + +      ++  + R+   + T E R  L K     AE ++ +      +R+ R
Sbjct: 175 EKAVRKLD-----AMQANLARLT--DLTAELRRQL-KPLGRQAEVARRAQTVQADLRDAR 226

Query: 134 -RDGMDHL---KKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
            R   D L   +       A ED V   ++++    D     +   
Sbjct: 227 LRLAADDLVTRRAEMAEHSAVEDEVRRRQDEVSVEADRIAAEVAEH 272


>gi|226530645|ref|NP_001141422.1| protease PrlC candidate1 [Zea mays]
 gi|194704532|gb|ACF86350.1| unknown [Zea mays]
 gi|223948491|gb|ACN28329.1| unknown [Zea mays]
 gi|224034233|gb|ACN36192.1| unknown [Zea mays]
          Length = 698

 Score = 35.0 bits (80), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 23/88 (26%)

Query: 117 VAHAYAEKSKISVRN---------IRRDGMD-HLKKSRKSGKASEDMVAS----LENDIQ 162
            +    E  K ++RN          R+  ++  +K++  SG A ED        +E +++
Sbjct: 105 QSKPIYEAFK-AIRNSSNWDSLSDARKRIVEAQIKEAVLSGVALEDEQRKKFNQIEQELE 163

Query: 163 KITDST-------IKNIDSFFEEKKKEI 183
           K+T           K  +    +K KEI
Sbjct: 164 KLTQKFSENVLDATKKFEKLITDK-KEI 190


>gi|388205|gb|AAA19677.1| putative [Streptococcus ferus]
          Length = 430

 Score = 35.0 bits (80), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 132 IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
           +R+   + LKK   S K  ED ++ LE  + + T   IK IDS   E+  E+
Sbjct: 258 LRKQYQEELKKLESSKKPLEDDLSHLEELLDEKTKEYIK-IDSETSERLSEL 308


>gi|242029754|gb|ACS76904.1| gag protein [Human immunodeficiency virus 1]
 gi|242029766|gb|ACS76910.1| gag protein [Human immunodeficiency virus 1]
 gi|242029768|gb|ACS76911.1| gag protein [Human immunodeficiency virus 1]
 gi|242029786|gb|ACS76920.1| gag protein [Human immunodeficiency virus 1]
          Length = 454

 Score = 35.0 bits (80), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP      EG  Q+++  +P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 29  LNPGLLETAEGCKQLIKQLLPALQTGTEELRSLYNTVATLYCVHAKIEVRDT-KEALDKI 87

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+    ++  +Q  ++ D 
Sbjct: 88  ----------EEEQKQVQQKMQPTEMADK 106


>gi|225870143|ref|YP_002746090.1| membrane protein [Streptococcus equi subsp. equi 4047]
 gi|225699547|emb|CAW93138.1| putative membrane protein [Streptococcus equi subsp. equi 4047]
          Length = 515

 Score = 35.0 bits (80), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 15/90 (16%)

Query: 105 ETTEERRLALVKVAHAYAEKS-------------KISVRNIRRDGMDHLKKSRKSGKASE 151
           E +++    + K A    EK              K  ++++  D +D LK+  K  K ++
Sbjct: 152 ELSKDDISKMEKEAKELQEKFDKLNGELKDKDKQKEKIKDLE-DEIDSLKEKMKKDKGNK 210

Query: 152 DMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           D+   ++ +I K+TD  +K ++    E KK
Sbjct: 211 DLSEDMKKEIDKLTDK-VKELEKKATETKK 239


>gi|242029788|gb|ACS76921.1| gag protein [Human immunodeficiency virus 1]
          Length = 454

 Score = 35.0 bits (80), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP      EG  Q+++  +P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 29  LNPGLLETAEGCKQLIKQLLPALQTGTEELRSLYNTVATLYCVHAKIEVRDT-KEALDKI 87

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+    ++  +Q  ++ D 
Sbjct: 88  ----------EEEQKQVQQKMQPTEMADK 106


>gi|210620879|ref|ZP_03292296.1| hypothetical protein CLOHIR_00239 [Clostridium hiranonis DSM 13275]
 gi|210155091|gb|EEA86097.1| hypothetical protein CLOHIR_00239 [Clostridium hiranonis DSM 13275]
          Length = 1084

 Score = 35.0 bits (80), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 117 VAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
            A    +K++  +    +  +D  K+  K+   ++D     END+ K  +  IK I+ 
Sbjct: 470 KAQKEFKKAEEEIAKNEKKLVDSEKELEKAKNEAKDEFKKAENDL-KEAEDEIKKIEK 526


>gi|71019415|ref|XP_759938.1| hypothetical protein UM03791.1 [Ustilago maydis 521]
 gi|119364593|sp|P18694|HSP72_USTMA RecName: Full=Heat shock 70 kDa protein 2
 gi|46099593|gb|EAK84826.1| hypothetical protein UM03791.1 [Ustilago maydis 521]
          Length = 645

 Score = 35.0 bits (80), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 14/104 (13%)

Query: 93  IVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS-------------VRNIRRDGMDH 139
             E   +R      + E+   ++K A  +AE+ K +             + N+R    + 
Sbjct: 495 KSEKITIRNDKGRLSSEQIEEMLKQAEQFAEEDKQALERTQAKNGLESYIYNVRNTTNEP 554

Query: 140 LKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKEI 183
             K +      E +   ++  I+ +  +T  + D   ++K+KEI
Sbjct: 555 QLKDKLEAADKEALEKIVKEGIEWLDSNTTASTDE-LKDKQKEI 597


>gi|18466722|ref|NP_569529.1| hypothetical protein HCM2.0057c [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16506038|emb|CAD09924.1| hypothetical protein [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
          Length = 1527

 Score = 35.0 bits (80), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 19/90 (21%)

Query: 116 KVAHAYAEKSKISVR-----------NIRRDGMDHLKKSRKSGKASEDMVASLENDI-QK 163
           ++A   AE     +R             R++ +D ++K       S+D    L   + +K
Sbjct: 726 RLAKEAAESQIEKIRADNQVFSATFVKARQEALDKIQKINDDKSLSDDEKNKLLAPLREK 785

Query: 164 ITDST----IKNIDSFFEEK---KKEIMHF 186
           +  S      K +D     K   +K+I HF
Sbjct: 786 VNKSYLEPAQKLVDDLSSRKNATEKQIAHF 815


>gi|260576328|ref|ZP_05844319.1| valyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021399|gb|EEW24704.1| valyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 998

 Score = 35.0 bits (80), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 4   VIDLQNIKDRMGDTISFLKKDMMTLRTGRVS 34
           +ID+   K R+  T+  L+KD+  LR GR++
Sbjct: 928 IIDIAEEKARLSKTLEKLEKDLNGLR-GRLN 957


>gi|68521984|gb|AAY98586.1| gag protein [Human immunodeficiency virus 1]
          Length = 490

 Score = 35.0 bits (80), Expect = 5.3,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 17/91 (18%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP      EG  Q+++   P     TEE R     VA  Y    KI VR+  ++ +D +
Sbjct: 46  LNPGLLETSEGCKQIIKQLHPALQTGTEELRSLYNTVATLYCVHKKIEVRDT-KEALDKI 104

Query: 141 -----KKSRKSGKASEDMVASLEND--IQKI 164
                K  +K+ +A ED     +N   +Q +
Sbjct: 105 EEEQNKSQQKTQQAKEDDRKISQNYPIVQNL 135


>gi|308476271|ref|XP_003100352.1| hypothetical protein CRE_22526 [Caenorhabditis remanei]
 gi|308265094|gb|EFP09047.1| hypothetical protein CRE_22526 [Caenorhabditis remanei]
          Length = 2369

 Score = 35.0 bits (80), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 138  DHLKKSRKSGKASEDMVASLENDI-------QKITDSTIKNIDSFFEEKKKEIMH 185
              L+K+    K S+D    +  ++       +KI +S  K I+   +E+++EI+ 
Sbjct: 2280 KSLEKAENELKISQDQQKKMVKELSDLKEENKKIVESEAKKIEKLSKEQEEEILK 2334


>gi|302916805|ref|XP_003052213.1| hypothetical protein NECHADRAFT_100132 [Nectria haematococca mpVI
           77-13-4]
 gi|256733152|gb|EEU46500.1| hypothetical protein NECHADRAFT_100132 [Nectria haematococca mpVI
           77-13-4]
          Length = 1472

 Score = 35.0 bits (80), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 130 RNIRRDGMDHLKKSRKSGKASED---MVASLENDIQKITDSTIKNIDSFFEEKKKEIMH 185
           R IRR   D +     +   S D      +L+  +Q +TD  +  + S     +K IM 
Sbjct: 685 RRIRR-IQDDIDSHPDAALISGDSDAERRALKRQLQNLTDK-VPELASQVRRTEKAIME 741


>gi|47575770|ref|NP_001001229.1| heat shock 70kDa protein 9 (mortalin) [Xenopus (Silurana)
           tropicalis]
 gi|45708908|gb|AAH67910.1| heat shock 70kDa protein 9 (mortalin) [Xenopus (Silurana)
           tropicalis]
 gi|89272823|emb|CAJ82069.1| heat shock 70kDa protein 9A [Xenopus (Silurana) tropicalis]
          Length = 670

 Score = 35.0 bits (80), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 15/93 (16%)

Query: 97  QVLRIPVPETTEERRLALVKVAHAYAEKSK------ISVRNIRRDGMDHLKKSRKSGK-A 149
           Q++       +++    +VK A  YAE+ +       +V N      D   K  +     
Sbjct: 538 QIVIQSSGGLSKDDIENMVKNAEKYAEEDRRRKERVEAVNNAEGIIHDTESKMEEFKDQL 597

Query: 150 SEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
             D    L+ +I K        +      K +E
Sbjct: 598 PADECNKLKEEISK--------VKELLTRKDEE 622


>gi|227204467|dbj|BAH57085.1| AT1G59900 [Arabidopsis thaliana]
 gi|227204471|dbj|BAH57087.1| AT1G59900 [Arabidopsis thaliana]
          Length = 107

 Score = 35.0 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 125 SKISVRNIR--RDGMDHLKKSRKSGKA-SEDMVASLENDIQKITDSTIKNIDS 174
           ++  +  +R  RD ++ +KK   S    +E  +  +E +I+K  D  I     
Sbjct: 20  TRDEISGVRQERDPIERIKKLVLSHDLATEKELKDMEKEIRKEVDDAIAKAKD 72


>gi|194883931|ref|XP_001976050.1| GG22641 [Drosophila erecta]
 gi|190659237|gb|EDV56450.1| GG22641 [Drosophila erecta]
          Length = 3148

 Score = 35.0 bits (80), Expect = 5.5,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 46/175 (26%)

Query: 43   VEAY--GSHVPLNQVANVTVLEPRMLVVSVWD--KEMVASVERGIHESNLGLNP---IVE 95
            V  Y  GS  PL     V      +L     +  +E  +   R I  S L   P     +
Sbjct: 981  VTYYAPGSSTPLKSNGQVFA----ILEQQPSNLSRENFSFSARAIVGSFLQPAPPPYAND 1036

Query: 96   GQVLRIP---------------VPETTEERRLALVKVAHAYAEKSKIS----VRN---IR 133
            G+ +R+                      E+R+ + K   A  +  K+      RN    R
Sbjct: 1037 GEYIRMTDEDVAKRLEDLKVFTRQTLNVEQRIEIAKQQQAMRDAKKLQKEELARNKEKAR 1096

Query: 134  RDGMDHLKKSRKSGKA----SEDMVASLENDIQKITDSTIKNIDSFFE---EKKK 181
            ++    L++ RK  +     + +     + ++ ++        +   +   EK+K
Sbjct: 1097 QEKNSKLEQQRKDKELKNQQAVEERKKRQEELDRL------KQEELLKKQQEKEK 1145


>gi|156546754|ref|XP_001605252.1| PREDICTED: similar to ATP-binding cassette sub-family A member 3,
           putative [Nasonia vitripennis]
          Length = 1589

 Score = 34.6 bits (79), Expect = 5.5,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 17/124 (13%)

Query: 18  ISFLKKDMMTLRTGRVSPSMLDLVKVEAY-GSHVPL---NQVANVTVLEPRMLVVSVWD- 72
           I  LKK+  T   G+     L  + V+ Y G    L   N     T++     ++S  D 
Sbjct: 412 IRGLKKEFRTHLFGKSKVQALRGISVDFYKGQITALLGHNGAGKTTLMSILTGMISPSDG 471

Query: 73  -----KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKI 127
                 + V   E  +  +++GL P  +     +  P  +   ++    +      KSK 
Sbjct: 472 AVYINGKNVKE-ESNVLMNDIGLCPQED-----MLFPTLSVAEQIEFFGMLKGK-NKSKA 524

Query: 128 SVRN 131
           ++++
Sbjct: 525 AIKH 528


>gi|262340876|ref|YP_003283731.1| putative outer membrane protein [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272213|gb|ACY40121.1| putative outer membrane protein [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 827

 Score = 34.6 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 28/41 (68%)

Query: 123 EKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQK 163
           E  ++ V+ IR++   ++KK +   K S+D++ +++NDIQ+
Sbjct: 116 EIHEVQVKGIRKEQFSNIKKLKSGDKISDDLIQTIKNDIQE 156


>gi|269139197|ref|YP_003295898.1| pyruvate kinase [Edwardsiella tarda EIB202]
 gi|267984858|gb|ACY84687.1| pyruvate kinase [Edwardsiella tarda EIB202]
 gi|304559113|gb|ADM41777.1| Pyruvate kinase [Edwardsiella tarda FL6-60]
          Length = 470

 Score = 34.6 bits (79), Expect = 5.7,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 15/144 (10%)

Query: 39  DLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQV 98
           D V V   G    L ++ N  +++  ++ + V D      V + ++  +LG N  V    
Sbjct: 104 DRVAVTYPGFAADL-RIGNTVLVDDGLIGMEVTDVTESTVVCKVLNNGDLGENKGVNLPG 162

Query: 99  LRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLE 158
           + I +P   E+ +  LV       E+    V          ++K     +  E + A   
Sbjct: 163 VSIQLPALAEKDKRDLV----FGCEQGVDFV------AASFIRKRADVLEIREHLKAHGG 212

Query: 159 NDIQKITD----STIKNIDSFFEE 178
             IQ I+       + N D   E 
Sbjct: 213 EQIQIISKIENQEGLNNFDEILEA 236


>gi|160887945|ref|ZP_02068948.1| hypothetical protein BACUNI_00349 [Bacteroides uniformis ATCC 8492]
 gi|156862631|gb|EDO56062.1| hypothetical protein BACUNI_00349 [Bacteroides uniformis ATCC 8492]
          Length = 1036

 Score = 34.6 bits (79), Expect = 5.7,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 13/72 (18%)

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKS-RKSGKASEDMVASLENDIQKITDSTIKNID 173
           V  A   A ++K           + L K+    G  S+D + +L+ ++Q   D  + ++D
Sbjct: 45  VNDAKTAANEAKD-------KAQEALDKAGSAEGGVSDDDLKALKKELQDQIDK-LASLD 96

Query: 174 ----SFFEEKKK 181
                    K++
Sbjct: 97  IVNQKIAALKEE 108


>gi|317477792|ref|ZP_07936983.1| hypothetical protein HMPREF1007_00099 [Bacteroides sp. 4_1_36]
 gi|316906050|gb|EFV27813.1| hypothetical protein HMPREF1007_00099 [Bacteroides sp. 4_1_36]
          Length = 1043

 Score = 34.6 bits (79), Expect = 5.7,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 13/72 (18%)

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKS-RKSGKASEDMVASLENDIQKITDSTIKNID 173
           V  A   A ++K           + L K+    G  S+D + +L+ ++Q   D  + ++D
Sbjct: 52  VNDAKTAANEAKD-------KAQEALDKAGSAEGGVSDDDLKALKKELQDQIDK-LASLD 103

Query: 174 ----SFFEEKKK 181
                    K++
Sbjct: 104 IVNQKIAALKEE 115


>gi|211906496|gb|ACJ11741.1| heat shock protein 70 [Gossypium hirsutum]
          Length = 648

 Score = 34.6 bits (79), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 14/92 (15%)

Query: 105 ETTEERRLALVKVA---------HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
             ++E    +V+ A         H    ++K ++ N   +  + +K  +   K S D   
Sbjct: 515 RLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLSPDDKK 574

Query: 156 SLENDIQK----ITDSTIKNIDSFFEEKKKEI 183
            +E+ I++    +  + +   D  FE+K KE+
Sbjct: 575 RIEDAIEEAIQWLDSNQLAEADE-FEDKMKEL 605


>gi|242029802|gb|ACS76928.1| gag protein [Human immunodeficiency virus 1]
          Length = 454

 Score = 34.6 bits (79), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP      EG  Q+++  +P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 29  LNPGPLETAEGCKQLIKQLLPALQTGTEELRSLYNTVATLYCVHAKIEVRDT-KEALDKI 87

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+    ++  +Q  ++ D 
Sbjct: 88  ----------EEEQKQVQQKMQPTEMADK 106


>gi|255722123|ref|XP_002545996.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240136485|gb|EER36038.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 563

 Score = 34.6 bits (79), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 129 VRN-IRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           VR+  R+D  + +KK     K  +  V S + ++QK+T    K ++ 
Sbjct: 218 VRDDARKDYNEAIKKYVNFIKKRDPRVKSGQEELQKLTKK--KQLEE 262


>gi|145297113|ref|YP_001139933.1| hypothetical protein cgR_p0018 [Corynebacterium glutamicum R]
 gi|140847060|dbj|BAF56031.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 1796

 Score = 34.6 bits (79), Expect = 6.0,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 120  AYAEKSKISVRNIRRDGMDHLKKSRKS-GKASEDMVASLEN--DIQKITDSTIKNIDSFF 176
               E+++ +V   R DG + +  + K+  KA ED  A  E     QK  +  + +     
Sbjct: 1127 EKVEEAEKAVARAREDGSEKIADAEKNLTKAREDEKADAEKIEAAQKRLNEAMADAPEKV 1186

Query: 177  EEKKKEI 183
            E+ +K +
Sbjct: 1187 EKAEKAL 1193


>gi|170098296|ref|XP_001880367.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164644805|gb|EDR09054.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 606

 Score = 34.6 bits (79), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLE----NDIQKITDSTIK 170
           V+      E+     RN+RR     L +  K      D    LE    + I++  + +I+
Sbjct: 496 VRNVKRKLEEDNEHERNLRRKLQRKLDELEKER----DDARRLETYALDQIKR--EVSIR 549

Query: 171 NIDSFFEEKKKEI-MHF 186
                  EK+ E+ M  
Sbjct: 550 RKAEERAEKEHELRMEL 566


>gi|118368041|ref|XP_001017230.1| hypothetical protein TTHERM_00194770 [Tetrahymena thermophila]
 gi|89298997|gb|EAR96985.1| hypothetical protein TTHERM_00194770 [Tetrahymena thermophila SB210]
          Length = 1213

 Score = 34.6 bits (79), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 46/110 (41%), Gaps = 17/110 (15%)

Query: 81   RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNI-----RRD 135
            + + + +L  N   + + LRI      +E R  L        E+ +  +++I     R +
Sbjct: 967  KTLQDKDLDANKARQEERLRI----IEQENRQKLY-----ELEEHRSKIKDITSHLKRAE 1017

Query: 136  GMDHLKKSRKSGKASE-DMVASLENDIQKITD--STIKNIDSFFEEKKKE 182
              D ++  R +   ++ D    L+ +I++I       + +    E K++E
Sbjct: 1018 AEDQIQVFRNTMLQNQLDEEKKLQKEIEQIQKDRKAQRELQQDLEFKQQE 1067


>gi|161076538|ref|NP_523701.3| toutatis, isoform A [Drosophila melanogaster]
 gi|157400284|gb|AAF58638.3| toutatis, isoform A [Drosophila melanogaster]
          Length = 2999

 Score = 34.6 bits (79), Expect = 6.2,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 46/175 (26%)

Query: 43   VEAY--GSHVPLNQVANVTVLEPRMLVVSVWD--KEMVASVERGIHESNLGLNP---IVE 95
            V  Y  GS  PL     V      +L     +  +E  +   R I  S L   P     +
Sbjct: 981  VTYYAPGSTTPLKSNGQVFA----ILEQQPSNLSRENFSFSARAIVGSFLQPAPPPYAND 1036

Query: 96   GQVLRIP---------------VPETTEERRLALVKVAHAYAEKSKIS----VRN---IR 133
            G+ +R+                      E+R+ + K   A  +  K+      RN    R
Sbjct: 1037 GEYIRMTDEDVAKRLEDLKVFTRQTLNVEQRIEIAKQQQAMRDAKKLQKEELARNKEKAR 1096

Query: 134  RDGMDHLKKSRKSGKA----SEDMVASLENDIQKITDSTIKNIDSFFE---EKKK 181
            ++    L++ RK  +     + +     + ++ ++        +   +   EK+K
Sbjct: 1097 QEKNSKLEQQRKDKELKNQQAVEERKKRQEELDRL------KQEELLKKQQEKEK 1145


>gi|47168783|pdb|1RGZ|A Chain A, Enterobacter Cloacae Gc1 Class C Beta-Lactamase Complexed
           With Transition-State Analog Of Cefotaxime
 gi|55669553|pdb|1Q2Q|A Chain A, Enterobacter Cloacae Gc1 Class C Beta-Lactamase Complexed
           With Penem Way185229
          Length = 363

 Score = 34.6 bits (79), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)

Query: 23  KDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERG 82
           +D   +R  RVSP MLD    +AYG    +  +AN  +    M   +V D  +   +   
Sbjct: 203 RDGKAVRAVRVSPGMLD---AQAYGVKTNVQDMANWVM--ANMAPENVADASLKQGIALA 257


>gi|1060878|dbj|BAA07922.1| class C beta-lactamase precursor [Enterobacter cloacae]
          Length = 384

 Score = 34.6 bits (79), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)

Query: 23  KDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERG 82
           +D   +R  RVSP MLD    +AYG    +  +AN  +    M   +V D  +   +   
Sbjct: 224 RDGKAVRAVRVSPGMLD---AQAYGVKTNVQDMANWVM--ANMAPENVADASLKQGIALA 278


>gi|5822076|pdb|1GCE|A Chain A, Structure Of The Beta-Lactamase Of Enterobacter Cloacae
           Gc1
 gi|14488469|pdb|1GA0|A Chain A, Structure Of The E. Cloacae Gc1 Beta-Lactamase With A
           Cephalosporin Sulfone Inhibitor
 gi|40889242|pdb|1ONH|A Chain A, Gc1 Beta-Lactamase With A Penem Inhibitor
          Length = 364

 Score = 34.6 bits (79), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)

Query: 23  KDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERG 82
           +D   +R  RVSP MLD    +AYG    +  +AN  +    M   +V D  +   +   
Sbjct: 204 RDGKAVRAVRVSPGMLD---AQAYGVKTNVQDMANWVM--ANMAPENVADASLKQGIALA 258


>gi|242029794|gb|ACS76924.1| gag protein [Human immunodeficiency virus 1]
          Length = 454

 Score = 34.6 bits (79), Expect = 6.3,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 22/89 (24%)

Query: 90  LNP----IVEG--QVLRIPVPET---TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHL 140
           LNP     +EG  Q+++   P     TEE R     VA  Y   +KI VR+  ++ +D +
Sbjct: 29  LNPGLLETLEGCKQIIKQLQPALQTGTEEIRSLYNTVATLYCVHAKIEVRDT-KEALDKI 87

Query: 141 KKSRKSGKASEDMVASLENDIQ--KITDS 167
                     E+    ++  IQ  ++ D 
Sbjct: 88  ----------EEEQKQVQQKIQRTEMADK 106


>gi|195485690|ref|XP_002091194.1| GE13512 [Drosophila yakuba]
 gi|194177295|gb|EDW90906.1| GE13512 [Drosophila yakuba]
          Length = 3129

 Score = 34.6 bits (79), Expect = 6.4,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 57/175 (32%), Gaps = 46/175 (26%)

Query: 43   VEAY--GSHVPLNQVANVTVLEPRMLVVSVWD--KEMVASVERGIHESNLGLNP---IVE 95
            V  Y  GS  PL     V      +L     +  +E  +   R I  S L   P     +
Sbjct: 980  VTYYAPGSTTPLKSNGQVFA----ILEQQPSNLSRENFSFSARAIVGSFLQPAPPPYAND 1035

Query: 96   GQVLRIP---------------VPETTEERRLALVKVAHAYAEKSKIS----VRN---IR 133
            G+ +R+                      E+R+ + K   A  +  K+      RN    R
Sbjct: 1036 GEYIRMTDEDVAKRLEDLKVFTRQTLNVEQRIEIAKQQQAMRDAKKLQKEELARNKEKAR 1095

Query: 134  RDGMDHLKKSRKSGKASE----DMVASLENDIQKITDSTIKNIDSFFE---EKKK 181
            ++    L++ RK  +       +     + ++ ++        +   +   EK+K
Sbjct: 1096 QEKNSKLEQQRKDKELKNQQAIEERKKRQEELDRL------KQEELLKKQQEKEK 1144


>gi|193082941|dbj|BAG50046.1| staphylocoagulase [Staphylococcus aureus]
 gi|193082943|dbj|BAG50047.1| staphylocoagulase [Staphylococcus aureus]
 gi|193082945|dbj|BAG50048.1| staphylocoagulase [Staphylococcus aureus]
          Length = 627

 Score = 34.6 bits (79), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 11/75 (14%)

Query: 102 PVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
            V   T E    + K      E+        R++  +  +K  K    SED       ++
Sbjct: 134 SVYNLTMEEYNEISKSLKDAEEEF-------RKNVSEVQEKEVKLKTYSEDEEEKATKEV 186

Query: 162 QKITDSTIKNIDSFF 176
             +    +  +D+ +
Sbjct: 187 YDL----VAEVDTIY 197


>gi|161076540|ref|NP_001097270.1| toutatis, isoform E [Drosophila melanogaster]
 gi|157400285|gb|ABV53763.1| toutatis, isoform E [Drosophila melanogaster]
          Length = 3131

 Score = 34.6 bits (79), Expect = 6.4,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 46/175 (26%)

Query: 43   VEAY--GSHVPLNQVANVTVLEPRMLVVSVWD--KEMVASVERGIHESNLGLNP---IVE 95
            V  Y  GS  PL     V      +L     +  +E  +   R I  S L   P     +
Sbjct: 981  VTYYAPGSTTPLKSNGQVFA----ILEQQPSNLSRENFSFSARAIVGSFLQPAPPPYAND 1036

Query: 96   GQVLRIP---------------VPETTEERRLALVKVAHAYAEKSKIS----VRN---IR 133
            G+ +R+                      E+R+ + K   A  +  K+      RN    R
Sbjct: 1037 GEYIRMTDEDVAKRLEDLKVFTRQTLNVEQRIEIAKQQQAMRDAKKLQKEELARNKEKAR 1096

Query: 134  RDGMDHLKKSRKSGKA----SEDMVASLENDIQKITDSTIKNIDSFFE---EKKK 181
            ++    L++ RK  +     + +     + ++ ++        +   +   EK+K
Sbjct: 1097 QEKNSKLEQQRKDKELKNQQAVEERKKRQEELDRL------KQEELLKKQQEKEK 1145


>gi|327183314|gb|AEA31761.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 879

 Score = 34.6 bits (79), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 4/46 (8%)

Query: 138 DHLKKSRKSGKASEDMVASLENDIQKITDS-TIKNIDSFFEEKKKE 182
           D L K  K  K  ED VA  E    K+ +   + +       K+KE
Sbjct: 814 DELAKMEKEEKRLEDEVARCEK---KLANKGFVDHAPEAVVNKEKE 856


>gi|325956486|ref|YP_004291898.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333051|gb|ADZ06959.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 879

 Score = 34.6 bits (79), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 4/46 (8%)

Query: 138 DHLKKSRKSGKASEDMVASLENDIQKITDS-TIKNIDSFFEEKKKE 182
           D L K  K  K  ED VA  E    K+ +   + +       K+KE
Sbjct: 814 DELAKMEKEEKRLEDEVARCEK---KLANKGFVDHAPEAVVNKEKE 856


>gi|323335674|gb|EGA76957.1| Smc5p [Saccharomyces cerevisiae Vin13]
          Length = 989

 Score = 34.6 bits (79), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 13/76 (17%)

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKN 171
              + +     E++K ++R I            K  K   +   +LEN ++++T+     
Sbjct: 279 KEKLNIYKEEYERAKANLRAI-----------LKDKKPFANTKKTLENQVEELTEKCSLK 327

Query: 172 IDSFFEEKKK--EIMH 185
            D F + K+K  EI  
Sbjct: 328 TDEFLKAKEKINEIFE 343


>gi|307185083|gb|EFN71282.1| Mitochondrial 2-oxoglutarate/malate carrier protein [Camponotus
           floridanus]
          Length = 738

 Score = 34.6 bits (79), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 134 RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIK-NIDSFFEEKKKEIM 184
           +   D ++K +KS    E      E  I  IT+      I+   E K+KEI+
Sbjct: 293 QKAKDEIQKIQKSITLKEKKKKMREAQI--ITEKYEPIKIEQIREIKEKEIL 342


>gi|183190466|gb|ACC46678.1| pol protein [Human immunodeficiency virus 1]
          Length = 404

 Score = 34.6 bits (79), Expect = 6.5,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 26/102 (25%)

Query: 39  DLVKVEAYG---------SHVPLNQVA-NVTVLEPRMLV--VSVWDKEMVASVERGIHES 86
           D + +E YG            P+N +  NV       L   +S             I   
Sbjct: 60  DQIPIEIYGHKXISTVLIGPTPVNIIGRNVMTQLGCTLNFPISP------------IETV 107

Query: 87  NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKIS 128
            + L P ++G  ++      TEE+  ALV++     E+ KIS
Sbjct: 108 PVKLKPGMDGPKVKQW--PLTEEKIKALVEICKELEEEGKIS 147


>gi|47228744|emb|CAG07476.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1034

 Score = 34.6 bits (79), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 109 ERRLALVKVAHAYAEKSK---ISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKIT 165
           E     ++      E++K    ++R+ +   +  +K+  +  +  ED V +    I+ +T
Sbjct: 228 ETTRKEIESVKKEREEAKRNLSALRHSQAPMVRKIKELDEQLQPIEDQVKAKTAAIKDVT 287

Query: 166 DSTIKNIDSFFEEKKKEI 183
               K      + K+KEI
Sbjct: 288 LK-CKQTQDQLDRKQKEI 304


>gi|82749938|ref|YP_415679.1| staphylocoagulase precursor [Staphylococcus aureus RF122]
 gi|82655469|emb|CAI79857.1| staphylocoagulase precursor [Staphylococcus aureus RF122]
          Length = 627

 Score = 34.6 bits (79), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 11/75 (14%)

Query: 102 PVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
            V   T E    + K      E+        R++  +  +K  K    SED       ++
Sbjct: 134 SVYNLTMEEYNEISKSLKDAEEEF-------RKNVSEVQEKEVKLKTYSEDEEEKATKEV 186

Query: 162 QKITDSTIKNIDSFF 176
             +    +  +D+ +
Sbjct: 187 YDL----VAEVDTIY 197


>gi|325180545|emb|CCA14951.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5096

 Score = 34.6 bits (79), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4386 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4445

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4446 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4502


>gi|325180542|emb|CCA14948.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5053

 Score = 34.6 bits (79), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4386 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4445

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4446 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4502


>gi|315038034|ref|YP_004031602.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276167|gb|ADQ58807.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 879

 Score = 34.6 bits (79), Expect = 6.6,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 4/46 (8%)

Query: 138 DHLKKSRKSGKASEDMVASLENDIQKITDS-TIKNIDSFFEEKKKE 182
           D L K  K  K  ED VA  E    K+ +   + +       K+KE
Sbjct: 814 DELAKMEKEEKRLEDEVARCEK---KLANKGFVDHAPEAVVNKEKE 856


>gi|290975738|ref|XP_002670599.1| predicted protein [Naegleria gruberi]
 gi|284084159|gb|EFC37855.1| predicted protein [Naegleria gruberi]
          Length = 448

 Score = 34.6 bits (79), Expect = 6.6,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 28/144 (19%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPS---MLDLVKVEAYGSHVPLNQVANVTVLEPRML 66
           +K+++   I  L +++      R+S +   +LD V VE   +        + TV +  M+
Sbjct: 316 LKEQIQKGIEELAQEVSK----RLSTTENFVLD-VSVEYDKNET-----GDCTVSKIWMI 365

Query: 67  VVSVWDKEMVA-------SVERGIHESNLGLNPIVEGQVLRIPVPETT-EERRLALVKVA 118
            ++ + K+           V   I   N    P+      R+     T +E R  L K  
Sbjct: 366 EINSFSKQASPCMFDWNDPVSNEILMGNR---PME----FRVLTKPLTLKEGREELAKDI 418

Query: 119 HAYAEKSKISVRNIRRDGMDHLKK 142
               E+   +V     +  D  KK
Sbjct: 419 REMLEEINGAVPPEAEESNDEDKK 442


>gi|156537263|ref|XP_001605702.1| PREDICTED: similar to ENSANGP00000001161 [Nasonia vitripennis]
          Length = 807

 Score = 34.6 bits (79), Expect = 6.6,   Method: Composition-based stats.
 Identities = 7/23 (30%), Positives = 15/23 (65%)

Query: 157 LENDIQKITDSTIKNIDSFFEEK 179
           L +++Q++TD  +K ++   E K
Sbjct: 353 LLDELQRLTDEYVKEVNDTLEPK 375


>gi|115491013|ref|XP_001210134.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114196994|gb|EAU38694.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 561

 Score = 34.6 bits (79), Expect = 6.6,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 6/91 (6%)

Query: 100 RIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASE-DMVASLE 158
           R P     EER+ A+ +   A  E ++   R  RR      +K + +  A+  D  A  +
Sbjct: 272 RFPTQARIEERKKAMEEAKKAREEAARQ--REQRRQETKRAQKEQANDGANPMDEAAKAK 329

Query: 159 NDIQKI---TDSTIKNIDSFFEEKKKEIMHF 186
               K+        K ++    + ++  M  
Sbjct: 330 QRADKLRRKLQKEQKRVEKAEADAERARMKV 360


>gi|325180547|emb|CCA14953.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5061

 Score = 34.6 bits (79), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4386 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4445

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4446 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4502


>gi|324518008|gb|ADY46979.1| Pyruvate dehydrogenase E1 component subunit alpha type II [Ascaris
           suum]
          Length = 396

 Score = 34.6 bits (79), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 6/60 (10%)

Query: 125 SKISVRNIR--RDGMDHLK-KSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           ++  ++ +R  RD +   K K   +G  +ED +  ++ +I+K  D+ +K   +   +K+ 
Sbjct: 299 TREEIQEVRKTRDPITGFKDKIVTAGLVTEDELKEVDKEIRKEVDAAVKQAHT---DKEA 355


>gi|213626935|gb|AAI70424.1| LOC398083 protein [Xenopus laevis]
          Length = 1962

 Score = 34.6 bits (79), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 97   QVLRIPVPETTEERRLAL--VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV 154
            Q +R    +  EE    L   K      EK+K ++   R +  + +K   +    SE   
Sbjct: 1188 QEIRQKHSQAVEELSEQLEQTKRLKGNLEKAKQALEGERNELANEVKTLLQGKGDSEHKR 1247

Query: 155  ASLENDIQKI 164
              +E  +Q++
Sbjct: 1248 KKVEAQLQEL 1257


>gi|129051|sp|P26268|ODPT_ASCSU RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha
           type II, mitochondrial; Short=PDHE1-A; Flags: Precursor
 gi|159677|gb|AAA29377.1| pyruvate dehydrogenase type II alpha subunit [Ascaris suum]
          Length = 391

 Score = 34.6 bits (79), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 6/60 (10%)

Query: 125 SKISVRNIR--RDGMDHLK-KSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKK 181
           ++  ++ +R  RD +   K K   +G  +ED +  ++ +I+K  D+ +K   +   +K+ 
Sbjct: 294 TREEIQEVRKTRDPITGFKDKIVTAGLVTEDELKEVDKEIRKEVDAAVKQAHT---DKEA 350


>gi|325180539|emb|CCA14945.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5087

 Score = 34.6 bits (79), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4377 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4436

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4437 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4493


>gi|257066707|ref|YP_003152963.1| hypothetical protein Apre_1218 [Anaerococcus prevotii DSM 20548]
 gi|256798587|gb|ACV29242.1| conserved hypothetical protein [Anaerococcus prevotii DSM 20548]
          Length = 360

 Score = 34.6 bits (79), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 23/109 (21%)

Query: 87  NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKS 146
           +L LNP  + Q+++      + ER   +   A   A  + ++           L ++  +
Sbjct: 217 DLALNPENKDQIIKDLTDSLS-ERAKTIADSADKEAIDNAVA-------QNSDLTEAE-A 267

Query: 147 GKASE-------DMVASLEN-------DIQKITDSTIKNIDSFFEEKKK 181
            + SE       D     E        +I K+++     +D   E  KK
Sbjct: 268 SEVSENIYNGLQDASKEAEKAINNASEEITKLSNEASDKVDETVEGAKK 316


>gi|47847498|dbj|BAD21421.1| mFLJ00279 protein [Mus musculus]
          Length = 1335

 Score = 34.6 bits (79), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 113 ALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
              K   A  EK+K ++ N R +  + +K   +    SE     +E  +Q++
Sbjct: 581 EQTKRVKATLEKAKQTLENERGELANEVKALLQGKGDSEHKRKKVEAQLQEL 632


>gi|116203627|ref|XP_001227624.1| hypothetical protein CHGG_09697 [Chaetomium globosum CBS 148.51]
 gi|88175825|gb|EAQ83293.1| hypothetical protein CHGG_09697 [Chaetomium globosum CBS 148.51]
          Length = 1690

 Score = 34.6 bits (79), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 13/73 (17%)

Query: 119  HAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDST------IKNI 172
             A AEK    +  +R+D     K+   + + SE     LE +IQ   D        ++  
Sbjct: 1073 KAKAEK---QITKLRKDHTKASKELEAAIRDSE----KLEAEIQNQGDKAEDYKTRVEEA 1125

Query: 173  DSFFEEKKKEIMH 185
                  KK+E+  
Sbjct: 1126 KEALAAKKQELAE 1138


>gi|325180541|emb|CCA14947.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5089

 Score = 34.6 bits (79), Expect = 6.8,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4367 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4426

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4427 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4483


>gi|325180534|emb|CCA14940.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5056

 Score = 34.6 bits (79), Expect = 6.8,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4377 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4436

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4437 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4493


>gi|325180528|emb|CCA14934.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5126

 Score = 34.6 bits (79), Expect = 6.8,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4377 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4436

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4437 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4493


>gi|148225656|ref|NP_001081846.1| myosin, heavy chain 9, non-muscle [Xenopus laevis]
 gi|3660672|gb|AAC83556.1| nonmuscle myosin II heavy chain A [Xenopus laevis]
          Length = 1964

 Score = 34.6 bits (79), Expect = 6.8,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 97   QVLRIPVPETTEERRLAL--VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV 154
            Q +R    +  EE    L   K      EK+K ++   R +  + +K   +    SE   
Sbjct: 1188 QEIRQKHSQAVEELSEQLEQTKRLKGNLEKAKQALEGERNELANEVKTLLQGKGDSEHKR 1247

Query: 155  ASLENDIQKI 164
              +E  +Q++
Sbjct: 1248 KKVEAQLQEL 1257


>gi|325180537|emb|CCA14943.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5034

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4367 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4426

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4427 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4483


>gi|325180533|emb|CCA14939.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5055

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4388 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4447

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4448 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4504


>gi|325180549|emb|CCA14955.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5069

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4367 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4426

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4427 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4483


>gi|325180548|emb|CCA14954.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5042

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4367 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4426

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4427 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4483


>gi|325180546|emb|CCA14952.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5054

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4367 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4426

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4427 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4483


>gi|325180544|emb|CCA14950.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5057

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4367 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4426

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4427 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4483


>gi|325180543|emb|CCA14949.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5016

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4349 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4408

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4409 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4465


>gi|325180540|emb|CCA14946.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5057

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4378 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4437

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4438 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4494


>gi|325180536|emb|CCA14942.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5063

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4388 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4447

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4448 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4504


>gi|325180532|emb|CCA14938.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5081

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4367 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4426

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4427 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4483


>gi|325180531|emb|CCA14937.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5127

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4378 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4437

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4438 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4494


>gi|325180529|emb|CCA14935.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5096

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4367 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4426

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4427 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4483


>gi|325180527|emb|CCA14933.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5055

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4349 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4408

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4409 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4465


>gi|325180526|emb|CCA14932.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5073

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4367 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4426

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4427 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4483


>gi|307546359|ref|YP_003898838.1| ATP-dependent protease ATP-binding subunit [Halomonas elongata DSM
           2581]
 gi|307218383|emb|CBV43653.1| ATP-dependent protease ATP-binding subunit [Halomonas elongata DSM
           2581]
          Length = 440

 Score = 34.6 bits (79), Expect = 6.9,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 36/97 (37%), Gaps = 7/97 (7%)

Query: 84  HESNLGLNPIVEGQVLRIP--VPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLK 141
            E ++ + P  +G  +  P  + E T + +     +     E  +++V    +D    L+
Sbjct: 168 KEIDIEVTPQSQGVDIMTPPGMEEMTSQLQNLFSSMGKQKTETRRVAV----KDAFALLR 223

Query: 142 KSRKSGKASEDMVA-SLENDIQKITDSTIKNIDSFFE 177
               +   +ED +       +++     +  +D   +
Sbjct: 224 DEEAAKLVNEDDIKQRAIEAVEQHGIVFLDELDKVAK 260


>gi|221059671|ref|XP_002260481.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
 gi|193810554|emb|CAQ41748.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
           knowlesi strain H]
          Length = 1229

 Score = 34.6 bits (79), Expect = 7.0,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDM-VASLENDIQKIT 165
           T+E +  L+     +    K  + + R   +D LKK  +  + S D  +  L++D Q+I 
Sbjct: 133 TKEEKKILIAQEKKF----KSVINDRRIKSLDDLKKMLRRNRNSRDDFMKKLQDDAQRIQ 188

Query: 166 DSTIKNIDSFFEEKKKEI 183
               +  +     +K+EI
Sbjct: 189 SQMEEQKNELLRNQKEEI 206


>gi|325180538|emb|CCA14944.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5065

 Score = 34.6 bits (79), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4378 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4437

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4438 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4494


>gi|325180530|emb|CCA14936.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5063

 Score = 34.6 bits (79), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4349 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4408

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4409 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4465


>gi|291279925|ref|YP_003496760.1| methyl-accepting chemotaxis protein [Deferribacter desulfuricans
           SSM1]
 gi|290754627|dbj|BAI81004.1| methyl-accepting chemotaxis protein [Deferribacter desulfuricans
           SSM1]
          Length = 814

 Score = 34.6 bits (79), Expect = 7.0,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 52/123 (42%), Gaps = 16/123 (13%)

Query: 68  VSVWDKEMVASVERGIHESNLGLN-------PIVEGQVLRIPVPETTEERRLALVKVAHA 120
           +SVW    ++ V+    ++ L L+       P+  G    + + +  EE    +      
Sbjct: 406 MSVWVNAYLSKVDEEFKKTLLNLSEVGEKIVPVSNG---LVKIEQNAEENVQ-MASQVAT 461

Query: 121 YAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKK 180
            +E+   ++  I R+  D   K+ ++ K ++D    +E  +     + ++ ++S  E  K
Sbjct: 462 ASEEMSSTIAEIARNANDASIKADETVKITQDGAKLIEETV-----NYVEQVNSVLENLK 516

Query: 181 KEI 183
            EI
Sbjct: 517 VEI 519


>gi|221119871|ref|XP_002155805.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 1097

 Score = 34.6 bits (79), Expect = 7.1,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 135 DGMDHLKKSRKSGKASEDMVASLEN---DIQKITDSTIKNI 172
           D  +   K +K+    +D +  LE    +IQK+  +  + I
Sbjct: 217 DANNAYNKHKKNADKQKDEIKDLEKSLIEIQKLAKAYEQEI 257


>gi|325180535|emb|CCA14941.1| conserved unknown protein putative [Albugo laibachii Nc14]
          Length = 5035

 Score = 34.6 bits (79), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 35/117 (29%)

Query: 105  ETTEER------RLALVKVAHAYA------EKSKISVRNIR---RDGMDHLKKSRKS--- 146
            +  EER      R     +   +       E  K  +R I    ++ M+ +K  +K    
Sbjct: 4360 KMNEEREILTRLRSENTIMKKKFTSLQQDIEDQKEEIRAIEEKSKEIMETIKALKKDVVG 4419

Query: 147  --GKASE------D------MVASLENDIQK---ITDSTIKNIDSFFEEKKKEIMHF 186
               +  E      D       +     +++K   + D  IK +    E +++EI+  
Sbjct: 4420 HQKEIREREETIQDKEKRIFDLKKKNQELEKFKFVLDYKIKELTRQIEPREQEIVEL 4476


>gi|296413130|ref|XP_002836269.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630082|emb|CAZ80460.1| unnamed protein product [Tuber melanosporum]
          Length = 401

 Score = 34.6 bits (79), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 125 SKISVRNIR--RDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           ++  V+ +R  +D +  LK+       SED + +LE + +   D  +K  +  
Sbjct: 312 TREEVQRMRSTQDPIQGLKQKILEWGISEDELKALEKEAKASVDEEVKKAEEA 364


>gi|194761841|ref|XP_001963131.1| GF15792 [Drosophila ananassae]
 gi|190616828|gb|EDV32352.1| GF15792 [Drosophila ananassae]
          Length = 289

 Score = 34.2 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%)

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           K  H   E      R I+ D  + L + + +    ED +   + +I++  D  +K +++ 
Sbjct: 141 KRIHQEIELQSYLNRLIKGDMENRLAQLKLNDNLHEDQLKDKQQEIEQECDDHVKELNNI 200

Query: 176 FEE 178
           F +
Sbjct: 201 FSK 203


>gi|124513532|ref|XP_001350122.1| conserved Plasmodium protein, unknown function [Plasmodium
           falciparum 3D7]
 gi|23615539|emb|CAD52531.1| conserved Plasmodium protein, unknown function [Plasmodium
           falciparum 3D7]
          Length = 1936

 Score = 34.2 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 129 VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSFFE--EKKKE 182
           ++ + ++  D +K+  K     ED++  LE + + +     K  +   +  EK+KE
Sbjct: 366 IKRLEKEKEDVIKRLEKEK---EDVIKRLEKEKEDVIKGFEKEKEDIIKGFEKEKE 418


>gi|194744199|ref|XP_001954582.1| GF18340 [Drosophila ananassae]
 gi|190627619|gb|EDV43143.1| GF18340 [Drosophila ananassae]
          Length = 258

 Score = 34.2 bits (78), Expect = 7.3,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 109 ERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKAS-EDMVASLENDIQKIT 165
           ER     K A+  AE ++  + ++ R  +  +K  +K    S + ++    N IQK T
Sbjct: 199 ERNRENAKKANCAAEDARQRI-DVMRQLVSKIKNLKKKDLQSLKSLIRRRRNQIQKNT 255


>gi|157828020|ref|YP_001494262.1| hypothetical protein A1G_00840 [Rickettsia rickettsii str. 'Sheila
            Smith']
 gi|157800501|gb|ABV75754.1| hypothetical protein A1G_00840 [Rickettsia rickettsii str. 'Sheila
            Smith']
          Length = 1153

 Score = 34.2 bits (78), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 107  TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
             EE    + +     AE++   +    ++ +++     K+ + S +++  +E+  Q ITD
Sbjct: 1053 IEEMPALIAQKVKDTAEEA--EIDQKIKEELNNFNADVKNYEYSTEVLNKIEDRKQAITD 1110

Query: 167  STIKNIDSFFEEKKKEIMH 185
                 ID   + ++   M 
Sbjct: 1111 EVNAQIDKINKYRENAKMQ 1129


>gi|158297514|ref|XP_317737.3| AGAP007777-PA [Anopheles gambiae str. PEST]
 gi|157015232|gb|EAA12167.3| AGAP007777-PA [Anopheles gambiae str. PEST]
          Length = 540

 Score = 34.2 bits (78), Expect = 7.8,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 105 ETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
           E     R    +   +  ++   +VR +RR+    L + +    A+ED+   L  + +K+
Sbjct: 136 EPNGSVRDEDDESVASKLDEVAATVRELRRE----LAELKSDRDATEDVNRQLLKETEKL 191

Query: 165 TDSTIKNIDSFFEEKKKEIMHF 186
            +S + + D    + ++++  F
Sbjct: 192 VNSKLSSADEIISKMEEKLSQF 213


>gi|86135031|ref|ZP_01053613.1| PP-loop family protein [Polaribacter sp. MED152]
 gi|85821894|gb|EAQ43041.1| PP-loop family protein [Polaribacter sp. MED152]
          Length = 436

 Score = 34.2 bits (78), Expect = 7.8,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 13/100 (13%)

Query: 92  PIVEGQVLRIPVPETTEERRLALVKVAH----AYAEKSKIS----VRN-IRRDGMDHLKK 142
           P + G ++R  +P      R  ++  A      + E +  +    VRN IR   +  LK+
Sbjct: 150 PAINGNIVRTLLP----FSRSEILNFAKSNNIEWREDASNASIKYVRNKIRHKVIPVLKE 205

Query: 143 SRKSGKASEDMVASLENDIQKITDSTIKNIDSFFEEKKKE 182
              S   S         ++Q+I +  I ++      K+KE
Sbjct: 206 INPSLLESFSNSIHHLKEVQEIVNDKIVDVTKQSVVKEKE 245


>gi|148554145|ref|YP_001261727.1| pyruvate dehydrogenase [Sphingomonas wittichii RW1]
 gi|148499335|gb|ABQ67589.1| Pyruvate dehydrogenase (acetyl-transferring) [Sphingomonas
           wittichii RW1]
          Length = 376

 Score = 34.2 bits (78), Expect = 7.8,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)

Query: 126 KISVRNIR--RDGMDHLKKSRKSGKASEDMVASLENDIQKI 164
           +  V+++R   D +DHLKK  ++    ED + +LE DI+ I
Sbjct: 308 RDEVQSVREKSDPIDHLKKELEAAGVGEDELRTLEKDIRAI 348


>gi|119386478|ref|YP_917533.1| hypothetical protein Pden_3771 [Paracoccus denitrificans PD1222]
 gi|119377073|gb|ABL71837.1| hypothetical protein Pden_3771 [Paracoccus denitrificans PD1222]
          Length = 1099

 Score = 34.2 bits (78), Expect = 8.0,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 4/70 (5%)

Query: 101 IPVPETTEERRLALVKVAHAYAEKS-KISVRNIRRDGMDHLKKSRKS-GKASEDMVASLE 158
           + +   T+  R A+V    +Y E   K  +RN++  G+   KK  K  G  SE ++ S  
Sbjct: 706 VTISSLTDAVRPAMVHGLKSYMEDGLKPLIRNMQ--GIKLAKKEAKEAGAISEKILHSRL 763

Query: 159 NDIQKITDST 168
             +  +TD  
Sbjct: 764 ATLADLTDPY 773


>gi|270294777|ref|ZP_06200978.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274024|gb|EFA19885.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 1043

 Score = 34.2 bits (78), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 13/72 (18%)

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKS-RKSGKASEDMVASLENDIQKITDSTIKNID 173
           +  A   A ++K           + L K+    G  S+D + +L+ ++Q   D  + ++D
Sbjct: 52  INDAKTAANEAKD-------KAQEALDKAGSAEGGVSDDDLKALKKELQDQIDK-LASLD 103

Query: 174 ----SFFEEKKK 181
                    K++
Sbjct: 104 IVNQKIAALKEE 115


>gi|329667903|gb|AEB93851.1| seryl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 436

 Score = 34.2 bits (78), Expect = 8.3,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 9/68 (13%)

Query: 105 ETTEERRLALVK--VAHAYAEKSKISVRNIRR---DGMDHLKKSRKSGKASEDMVASLEN 159
              +ERR AL K         +    +   +R   D  D +K  R+ GK     +  L+ 
Sbjct: 33  AIDKERREALTKSEQLKQKRNEVSDQIAQAKRNKEDASDAIKAMREVGK----EIKDLDK 88

Query: 160 DIQKITDS 167
           +++ +T  
Sbjct: 89  EVEDLTQK 96


>gi|210611105|ref|ZP_03288735.1| hypothetical protein CLONEX_00925 [Clostridium nexile DSM 1787]
 gi|210152165|gb|EEA83172.1| hypothetical protein CLONEX_00925 [Clostridium nexile DSM 1787]
          Length = 1634

 Score = 34.2 bits (78), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 9/54 (16%)

Query: 135  DGMDHLKKSRKSGKASEDMVASLENDIQK-------ITDSTIKNIDSFFEEKKK 181
            D +D  K      +A+E+ V    +D+QK       I +     ++   +E +K
Sbjct: 1400 DAIDAAKAVIDDKEATEEQVKKAHDDLQKALFELRLIPNK--DKLEDLIKEAEK 1451


>gi|322790260|gb|EFZ15259.1| hypothetical protein SINV_10327 [Solenopsis invicta]
          Length = 481

 Score = 34.2 bits (78), Expect = 8.4,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 20/89 (22%)

Query: 106 TTEERRLAL---VKVAHA-------YAEKSKISVRNIR---RDGMDHLKKSRKSGKASED 152
            T + R  +    K A           EK+K    N     R   +  + +      S D
Sbjct: 124 MTLKERKEMEDSFKKAQKPWAKLLQKVEKAKSEYHNSCKTERTATNMERNASADSSLSPD 183

Query: 153 MVASLENDIQKITDSTIKNIDSFFEEKKK 181
            V  +++ +QK T       +   + K+K
Sbjct: 184 QVKKMQDRVQK-TK------EEVLKAKEK 205


>gi|326427906|gb|EGD73476.1| hypothetical protein PTSG_12272 [Salpingoeca sp. ATCC 50818]
          Length = 468

 Score = 34.2 bits (78), Expect = 8.7,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 14/93 (15%)

Query: 104 PETTEERRLALVKVAHAYAEKSKISVRNIRRD-----GMDHLKKSRKSGKASEDMVASLE 158
           P    ++R  L++ A  + E+   +V  +  +     G +  KK      AS D      
Sbjct: 338 PMPAHDKRHELLESA--FLEEGNQAVLRLTHEPTGLPGFEEYKKKIDDVMAS-DDFKRAL 394

Query: 159 NDIQKIT------DSTIKNIDSFFEEKKKEIMH 185
            D+Q IT       + I++     E K +E + 
Sbjct: 395 KDMQNITSDTDVLKAAIEHTKPKVEVKTQEFLE 427


>gi|253748146|gb|EET02472.1| Coiled-coil protein [Giardia intestinalis ATCC 50581]
          Length = 1247

 Score = 34.2 bits (78), Expect = 8.7,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 28/149 (18%)

Query: 46  YGSHVPLNQVANVTVLEPRMLVV-SVWDK-EMVASVERGIHESNLGLNPIVEGQVLRIPV 103
           YG+   L     V   +     + +V+ +   +   E+G   ++L +  +         +
Sbjct: 29  YGTTYSLPATQQVGKSDSITPGISTVYTQASSINRYEQGRTANDLHVQLMETKSR---SL 85

Query: 104 PETTEERRLAL-VKVAHAYAEKSKISVRN--------IRRDGMDHLKKSRKSGKASEDMV 154
            + TE+R   L +       EK K  +          IR+   + L K + +    ED  
Sbjct: 86  QDLTEKRLAELKLDQVIQENEKFKQKILQLDGELQAAIRQC--EELSKYKDAKAIIEDDH 143

Query: 155 ASLENDIQKITDSTIKNIDSFFEEKKKEI 183
                         I+ ++    +K+KEI
Sbjct: 144 RQ------------IEELEHCLADKEKEI 160


>gi|253989400|ref|YP_003040756.1| pyruvate kinase [Photorhabdus asymbiotica subsp. asymbiotica ATCC
           43949]
 gi|253780850|emb|CAQ84012.1| pyruvate kinase [Photorhabdus asymbiotica]
          Length = 469

 Score = 34.2 bits (78), Expect = 8.8,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 39  DLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQV 98
           D V V   G    L    N  +++  ++ ++V +      + + ++  +LG N  V    
Sbjct: 104 DRVAVTYSGFPADLTP-GNTVLVDDGLIGMTVKEVTASEVICQVLNNGDLGENKGVNLPG 162

Query: 99  LRIPVPETTEERRLALV 115
           + I +P   E+ +  L+
Sbjct: 163 ISISLPALAEKDKQDLI 179


>gi|205360086|ref|ZP_02834442.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205341189|gb|EDZ27953.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
          Length = 320

 Score = 34.2 bits (78), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 21/93 (22%)

Query: 112 LALVKVAHAYAEKSKISVRNIRRDGMDHLK------------KSRKSGKASEDMVASLEN 159
             + K        +K  + N  R     ++               K    +E ++     
Sbjct: 135 EEINKNVEYEYADAKARL-NAER-ANKAIEYDTNALEDKYNNAQIKLRDINE-LIKEKGK 191

Query: 160 DIQKITDSTIKNIDSF------FEEKKKEIMHF 186
           ++Q +T+S    IDS        E K+KE+M  
Sbjct: 192 EVQTVTNSYYNAIDSISKVRTELELKEKELMDL 224


>gi|71987383|ref|NP_490757.2| hypothetical protein F56A6.4 [Caenorhabditis elegans]
          Length = 479

 Score = 34.2 bits (78), Expect = 8.9,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 21/64 (32%), Gaps = 5/64 (7%)

Query: 116 KVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDSF 175
           K+     E +K +     R+     K   K  K SE      E +  K T    + I + 
Sbjct: 131 KLIQELRENAKRA-----REAEKERKTLEKDKKKSEMARRREEKEKDKETRKIEREISAA 185

Query: 176 FEEK 179
              K
Sbjct: 186 TNSK 189


>gi|330920648|ref|XP_003299088.1| hypothetical protein PTT_10019 [Pyrenophora teres f. teres 0-1]
 gi|311327357|gb|EFQ92808.1| hypothetical protein PTT_10019 [Pyrenophora teres f. teres 0-1]
          Length = 594

 Score = 34.2 bits (78), Expect = 9.0,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 10/77 (12%)

Query: 95  EGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRN----IRRDGMDHLKKSRKSGKAS 150
           E +  R+      EER           AE ++ + R       R  +  L++ RK  +  
Sbjct: 417 EAETARLRAQVEAEEREQ------KRQAEAARKARRKQEQEEERKTLQFLEQERKQKELE 470

Query: 151 EDMVASLENDIQKITDS 167
           E      + ++ K T+ 
Sbjct: 471 EKERRRKQAEVDKETER 487


>gi|255102548|ref|ZP_05331525.1| putative cell surface protein [Clostridium difficile QCD-63q42]
          Length = 522

 Score = 34.2 bits (78), Expect = 9.0,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 2/60 (3%)

Query: 115 VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNIDS 174
           +K     ++K K  ++++  D +D LK   +  KA +D+   ++ ++ K+TD  IK ++ 
Sbjct: 183 IKDKDKLSDKQKDKIKDLE-DKIDKLKGKLEKSKADKDLSTDMKKEMDKLTDK-IKELEK 240


>gi|255575054|ref|XP_002528432.1| heat shock protein, putative [Ricinus communis]
 gi|223532108|gb|EEF33915.1| heat shock protein, putative [Ricinus communis]
          Length = 649

 Score = 34.2 bits (78), Expect = 9.0,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 14/92 (15%)

Query: 105 ETTEERRLALVKVAHAY-AEK--------SKISVRNIRRDGMDHLKKSRKSGKASEDMVA 155
             ++E    +V+ A  Y AE         +K ++ N   +  + +K  + S K S D   
Sbjct: 515 RLSKEEIEKMVQEAEKYKAEDEEHKKKIDAKNALENYAYNMRNTVKDEKISSKLSPDDKK 574

Query: 156 SLENDIQK----ITDSTIKNIDSFFEEKKKEI 183
            +E+ I++    +  + +   D  FE+K KE+
Sbjct: 575 KIEDAIEQAIQWLDANQLAEADE-FEDKMKEL 605


>gi|169334018|ref|ZP_02861211.1| hypothetical protein ANASTE_00411 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258735|gb|EDS72701.1| hypothetical protein ANASTE_00411 [Anaerofustis stercorihominis DSM
           17244]
          Length = 328

 Score = 34.2 bits (78), Expect = 9.0,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 6/53 (11%)

Query: 134 RDGMDHLK-KSRKSGKASE---DMV-ASLENDIQKITDSTIKNIDSFFEEKKK 181
            D +D  K         +E   D +   +E +I    +   K +D     K+ 
Sbjct: 270 HDAIDKFKNDLIAMNMITEEEFDELDKKIEKEIDDAAEKA-KKVDEIISVKEA 321


>gi|156094726|ref|XP_001613399.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148802273|gb|EDL43672.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 1832

 Score = 34.2 bits (78), Expect = 9.0,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 14/89 (15%)

Query: 102 PVPETTEERRLALVKVAHAYAE--KSKISVRNIRRDGMDHL--KKSRKSGKASEDMVASL 157
            V +  E+     V+     AE  K+   ++  +RD  D+    K +K     E      
Sbjct: 85  NVQKNVEKNVQKNVEKNEKEAERNKACREIKKKQRDANDYFCTDKMKKQHTYEEREKFVF 144

Query: 158 ENDIQKITDSTIKNIDSFFEEKKKEIMHF 186
           E +I K+ D               EIM  
Sbjct: 145 EQEIGKVHDVYNGE----------EIMKI 163


>gi|42519649|ref|NP_965579.1| seryl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|227889410|ref|ZP_04007215.1| seryl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|67461827|sp|Q74HZ5|SYS_LACJO RecName: Full=Seryl-tRNA synthetase; AltName: Full=Serine--tRNA
           ligase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec)
           synthetase
 gi|41583938|gb|AAS09545.1| seryl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|227850042|gb|EEJ60128.1| seryl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 436

 Score = 34.2 bits (78), Expect = 9.0,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 9/68 (13%)

Query: 105 ETTEERRLALVK--VAHAYAEKSKISVRNIRR---DGMDHLKKSRKSGKASEDMVASLEN 159
              +ERR AL K         +    +   +R   D  D +K  R+ GK     +  L+ 
Sbjct: 33  AIDKERREALTKSEQLKQKRNEVSDQIAQAKRNKEDASDAIKAMREVGK----EIKDLDK 88

Query: 160 DIQKITDS 167
           +++ +T  
Sbjct: 89  EVEDLTQK 96


>gi|162417827|ref|YP_001604601.1| putative phage tail tape measure protein [Yersinia pestis Angola]
 gi|162350799|gb|ABX84748.1| putative phage tail tape measure protein [Yersinia pestis Angola]
          Length = 1521

 Score = 34.2 bits (78), Expect = 9.1,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 33/100 (33%)

Query: 116 KVAHAYAEKSKISVR-----------NIRRDGMDHLKKSRKSGKASEDMV---------- 154
           ++A   AE     +R             R++ +D ++K       S+D            
Sbjct: 722 RLAKEAAESQIEKIRADNQVFSATFVKARQEALDKIQKINDDKSLSDDEKNKLLAPLREK 781

Query: 155 --ASLENDIQKI----------TDSTIKNIDSFFEEKKKE 182
              S     QK+          T+  I +     E+ KKE
Sbjct: 782 VNKSYLEPAQKLVYDLSSRKNATEKQIAHFSDMLEKAKKE 821


>gi|294636114|ref|ZP_06714540.1| pyruvate kinase [Edwardsiella tarda ATCC 23685]
 gi|291090581|gb|EFE23142.1| pyruvate kinase [Edwardsiella tarda ATCC 23685]
          Length = 473

 Score = 34.2 bits (78), Expect = 9.3,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 52/144 (36%), Gaps = 15/144 (10%)

Query: 39  DLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQV 98
           + V V   G    L ++ N  +++  ++ + V D      V + ++  +LG N  V    
Sbjct: 107 ERVAVTYPGFAADL-RIGNTVLVDDGLIGMEVIDVSESTVVCKVLNNGDLGENKGVNLPG 165

Query: 99  LRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLE 158
           + I +P   E+ +  LV       E+    V          ++K     +  E + A   
Sbjct: 166 VSIQLPALAEKDKRDLV----FGCEQGVDFV------AASFIRKRADVLEIREHLKAHGG 215

Query: 159 NDIQKITD----STIKNIDSFFEE 178
             IQ I+       + N D   E 
Sbjct: 216 EQIQIISKIENQEGLNNFDEILEA 239


>gi|300765878|ref|ZP_07075852.1| phage tail tape measure protein [Listeria monocytogenes FSL N1-017]
 gi|300513455|gb|EFK40528.1| phage tail tape measure protein [Listeria monocytogenes FSL N1-017]
          Length = 1678

 Score = 34.2 bits (78), Expect = 9.3,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 35/81 (43%), Gaps = 12/81 (14%)

Query: 105  ETTEERRLALVKVAHAYAEKSKISVRNIR--------RDGMDHLKKSRKSGKASEDMVAS 156
            + + ++R A VK A+   + +K  +   R        ++  + +K+++K    + D    
Sbjct: 963  KNSAKQRNATVKEANKEFKDTKRILDEKRFVTGEIGEKEYREAIKQAKKKKDGTIDEAEK 1022

Query: 157  LENDI----QKITDSTIKNID 173
            +  ++    QK     +K +D
Sbjct: 1023 MHKEVVNQAQKQAKGHLKEVD 1043


>gi|253579397|ref|ZP_04856667.1| predicted protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849495|gb|EES77455.1| predicted protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 241

 Score = 33.8 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 10/73 (13%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD 166
           TEE+    V       E +   +R  RR     ++K+ K+ + +E    +    IQ+  +
Sbjct: 59  TEEQTQEFV---AKEEEAA--QIREERR-----VEKAEKASEKAEQEKTAALESIQQTVE 108

Query: 167 STIKNIDSFFEEK 179
            T K I    E K
Sbjct: 109 DTKKKIAEEAEAK 121


>gi|16082793|ref|NP_395347.1| hypothetical protein YPMT1.11c [Yersinia pestis CO92]
 gi|31795187|ref|NP_857648.1| hypothetical protein YPKMT011 [Yersinia pestis KIM]
 gi|31795374|ref|NP_857827.1| hypothetical protein Y1044 [Yersinia pestis KIM]
 gi|108793743|ref|YP_636580.1| membrane protein [Yersinia pestis Nepal516]
 gi|145597203|ref|YP_001154666.1| membrane protein [Yersinia pestis Pestoides F]
 gi|149192788|ref|YP_001294019.1| hypothetical protein YPE_4305 [Yersinia pestis CA88-4125]
 gi|165939456|ref|ZP_02228003.1| putative phage tail tape measure protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166012157|ref|ZP_02233055.1| putative phage tail tape measure protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166214373|ref|ZP_02240408.1| putative phage tail tape measure protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167422813|ref|ZP_02314566.1| putative phage tail tape measure protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426931|ref|ZP_02318684.1| putative phage tail tape measure protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167466670|ref|ZP_02331374.1| hypothetical protein YpesF_02000 [Yersinia pestis FV-1]
 gi|229896939|ref|ZP_04512098.1| putative membrane protein [Yersinia pestis Pestoides A]
 gi|229897769|ref|ZP_04512924.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229900280|ref|ZP_04515415.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229904802|ref|ZP_04519912.1| putative membrane protein [Yersinia pestis Nepal516]
 gi|270490988|ref|ZP_06208061.1| phage tail tape measure protein, lambda family [Yersinia pestis KIM
           D27]
 gi|294502003|ref|YP_003565740.1| hypothetical protein YPZ3_pMT0011 [Yersinia pestis Z176003]
 gi|2996290|gb|AAC13170.1| protein HI1514 homolog [Yersinia pestis KIM 10]
 gi|3883044|gb|AAC82704.1| unknown [Yersinia pestis KIM 10]
 gi|5834696|emb|CAB55193.1| putative membrane protein [Yersinia pestis CO92]
 gi|108777807|gb|ABG20325.1| membrane protein [Yersinia pestis Nepal516]
 gi|145212971|gb|ABP42376.1| membrane protein [Yersinia pestis Pestoides F]
 gi|148872446|gb|ABR14935.1| putative membrane protein [Yersinia pestis CA88-4125]
 gi|165912644|gb|EDR31274.1| putative phage tail tape measure protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165988923|gb|EDR41224.1| putative phage tail tape measure protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166204431|gb|EDR48911.1| putative phage tail tape measure protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166958306|gb|EDR55327.1| putative phage tail tape measure protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167054098|gb|EDR63925.1| putative phage tail tape measure protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229678117|gb|EEO74223.1| putative membrane protein [Yersinia pestis Nepal516]
 gi|229686639|gb|EEO78720.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693350|gb|EEO83400.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229699975|gb|EEO88015.1| putative membrane protein [Yersinia pestis Pestoides A]
 gi|262363897|gb|ACY60616.1| hypothetical protein YPD4_pMT0011 [Yersinia pestis D106004]
 gi|262364053|gb|ACY64389.1| hypothetical protein YPD8_pMT0011 [Yersinia pestis D182038]
 gi|270334969|gb|EFA45747.1| phage tail tape measure protein, lambda family [Yersinia pestis KIM
           D27]
 gi|294352474|gb|ADE66530.1| hypothetical protein YPZ3_pMT0011 [Yersinia pestis Z176003]
 gi|320017533|gb|ADW01103.1| putative membrane protein [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 1525

 Score = 33.8 bits (77), Expect = 9.4,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 33/100 (33%)

Query: 116 KVAHAYAEKSKISVR-----------NIRRDGMDHLKKSRKSGKASEDMV---------- 154
           ++A   AE     +R             R++ +D ++K       S+D            
Sbjct: 726 RLAKEAAESQIEKIRADNQVFSATFVKARQEALDKIQKINDDKSLSDDEKNKLLAPLREK 785

Query: 155 --ASLENDIQKI----------TDSTIKNIDSFFEEKKKE 182
              S     QK+          T+  I +     E+ KKE
Sbjct: 786 VNKSYLEPAQKLVYDLSSRKNATEKQIAHFSDMLEKAKKE 825


>gi|301606019|ref|XP_002932631.1| PREDICTED: myomegalin-like [Xenopus (Silurana) tropicalis]
          Length = 1207

 Score = 33.8 bits (77), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 102 PVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDI 161
            +P+ + E R              ++ +  I RD    L+  +K   +S   + ++E D+
Sbjct: 876 SLPQLSNENR-----ALREENLSLQVRINQISRDYFKELENLQKLLSSSRAQLKNVETDL 930

Query: 162 QKITDSTIKNIDSFFEEKKKEIMHF 186
           ++ T  + K +    ++K++EI+H 
Sbjct: 931 EQKTQES-KKLQEELDQKQQEILHL 954


>gi|291298657|ref|YP_003509935.1| hypothetical protein Snas_1132 [Stackebrandtia nassauensis DSM
           44728]
 gi|290567877|gb|ADD40842.1| hypothetical protein Snas_1132 [Stackebrandtia nassauensis DSM
           44728]
          Length = 300

 Score = 33.8 bits (77), Expect = 9.7,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 8/64 (12%)

Query: 104 PETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQK 163
           P   E+    L K     AE  K        D    LK + K  K  +  +   E  +++
Sbjct: 4   PAYAEDEVHKLEKKLEKAAEAYK--------DAKKDLKDAEKKQKKLKKDIKDGEKKVEE 55

Query: 164 ITDS 167
           +TD 
Sbjct: 56  LTDE 59


>gi|282852800|ref|ZP_06262141.1| serine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282555908|gb|EFB61529.1| serine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 436

 Score = 33.8 bits (77), Expect = 9.7,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 9/68 (13%)

Query: 105 ETTEERRLALVK--VAHAYAEKSKISVRNIRR---DGMDHLKKSRKSGKASEDMVASLEN 159
              +ERR AL K         +    +   +R   D  D +K  R+ GK     +  L+ 
Sbjct: 33  AIDKERREALTKSEQLKQKRNEVSDQIAQAKRNKEDASDAIKAMREVGK----EIKDLDK 88

Query: 160 DIQKITDS 167
           +++ +T  
Sbjct: 89  EVEDLTQK 96


>gi|294084442|ref|YP_003551200.1| BLUF domain-containing protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664015|gb|ADE39116.1| BLUF domain protein [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 411

 Score = 33.8 bits (77), Expect = 9.8,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 64/167 (38%), Gaps = 4/167 (2%)

Query: 10  IKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTV---LEPRML 66
            K+R+   +      +  L +     ++L  V+V     +  L   A V +    + R  
Sbjct: 16  CKNRIEAMLDGYIHSLNELASLDTLKNILYGVRVVIDYRNRHLTDFAEVHLENDPKARFF 75

Query: 67  VVSVWDKEMVASVERGIHESNLG-LNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKS 125
            VSV   ++V  V R +  +    +    +   L I +   + ++R  L   A      +
Sbjct: 76  SVSVTRLDIVRDVRRVMRSAGFDEMKFDEDNMTLWIIIKRPSYDQRHELALEASRLERAT 135

Query: 126 KISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
           + +  N++RD ++ L+ +       E  +      I+ I   T++ I
Sbjct: 136 RQAAANVKRDTLERLRAAVDREYIEEFDIKPTMETIETIYARTVEQI 182


>gi|238852918|ref|ZP_04643319.1| serine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834454|gb|EEQ26690.1| serine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 436

 Score = 33.8 bits (77), Expect = 9.8,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 9/68 (13%)

Query: 105 ETTEERRLALVK--VAHAYAEKSKISVRNIRR---DGMDHLKKSRKSGKASEDMVASLEN 159
              +ERR AL K         +    +   +R   D  D +K  R+ GK     +  L+ 
Sbjct: 33  AIDKERREALTKSEQLKQKRNEVSDQIAQAKRNKEDASDAIKAMREVGK----EIKDLDK 88

Query: 160 DIQKITDS 167
           +++ +T  
Sbjct: 89  EVEDLTQK 96


>gi|60683499|ref|YP_213643.1| recombination enzyme [Bacteroides fragilis NCTC 9343]
 gi|60494933|emb|CAH09749.1| possible recombination enzyme [Bacteroides fragilis NCTC 9343]
          Length = 505

 Score = 33.8 bits (77), Expect = 9.8,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 14/89 (15%)

Query: 108 EERRLALVKVAHAYAEKS----KISVRNIR------RDGMDHLKKSRKSGKASEDMVASL 157
            +    L K A   AEK+    +  +RN+       R  ++  +K   SGK + D   + 
Sbjct: 233 RDYIRKLTKEAKQ-AEKAVKGLQSMMRNLESKIFSYRLQLEETEKELASGKITLDRYEAQ 291

Query: 158 ENDIQKITDSTIKNID---SFFEEKKKEI 183
           + DIQK+       ++        K++E+
Sbjct: 292 KADIQKLIAEYQTKLEDKTDKLHAKEQEL 320


>gi|319234039|ref|NP_001187381.1| inhibitor of growth family, member 5a [Ictalurus punctatus]
 gi|308322865|gb|ADO28570.1| inhibitor of growth protein 5 [Ictalurus punctatus]
          Length = 235

 Score = 33.8 bits (77), Expect = 9.9,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 10/82 (12%)

Query: 107 TEERRLALVKVAHAYAEKSKISVRNIR-RDGMDHLKKSR----KSGKASEDMVASLENDI 161
           TEE++  +  +A  Y E     VRN+   + + HLKK      K  + S+D V      I
Sbjct: 35  TEEKKEEIDGLASEYIEN----VRNLSPEERVQHLKKIELAYSKCKEFSDDKVQLAM-QI 89

Query: 162 QKITDSTIKNIDSFFEEKKKEI 183
            ++ D  I+ +D+     + E+
Sbjct: 90  YELVDKHIRRLDADLARFENEL 111


>gi|301610455|ref|XP_002934764.1| PREDICTED: LOW QUALITY PROTEIN: myosin-9-like [Xenopus (Silurana)
            tropicalis]
          Length = 1947

 Score = 33.8 bits (77), Expect = 9.9,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 97   QVLRIPVPETTEERRLAL--VKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMV 154
            Q +R    +  EE    L   K      EK+K S+   R +  + +K   +    SE   
Sbjct: 1175 QEIRQKHSQAVEELSEQLEQTKRLKGNLEKAKQSLEGERNELANEVKALLQGKGDSEHKR 1234

Query: 155  ASLENDIQKI 164
              +E  +Q++
Sbjct: 1235 KKVEGQLQEL 1244


>gi|118443186|ref|YP_877383.1| DNA modification methylase [Clostridium novyi NT]
 gi|118133642|gb|ABK60686.1| DNA modification methylase, putative [Clostridium novyi NT]
          Length = 1191

 Score = 33.8 bits (77), Expect = 9.9,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 129  VRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITDSTIKNI 172
            + NI  + M  +KK + +G+ SE       ++IQ+  D  +  +
Sbjct: 1144 INNIVDEAM-QIKKKQFNGEISEKETKDKLDEIQQKVDDFVYKL 1186


>gi|300722821|ref|YP_003712113.1| pyruvate kinase I (formerly F), fructose-stimulated [Xenorhabdus
           nematophila ATCC 19061]
 gi|297629330|emb|CBJ89929.1| pyruvate kinase I (formerly F), fructose-stimulated [Xenorhabdus
           nematophila ATCC 19061]
          Length = 469

 Score = 33.8 bits (77), Expect = 10.0,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 1/77 (1%)

Query: 39  DLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHESNLGLNPIVEGQV 98
           D V V   G    L     V V +  ++ ++V +      +   ++  +LG N  V    
Sbjct: 104 DRVAVTYAGLPADLAPGKTVLVDDG-LIAMTVKEITATEVICEVLNNGDLGENKGVNLPN 162

Query: 99  LRIPVPETTEERRLALV 115
           + I +P   E+ +  LV
Sbjct: 163 VSINLPALAEKDKQDLV 179


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.180    0.560 

Lambda     K      H
   0.267   0.0552    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,469,757,150
Number of Sequences: 14124377
Number of extensions: 245891394
Number of successful extensions: 1165599
Number of sequences better than 10.0: 5601
Number of HSP's better than 10.0 without gapping: 4492
Number of HSP's successfully gapped in prelim test: 3298
Number of HSP's that attempted gapping in prelim test: 1147292
Number of HSP's gapped (non-prelim): 18112
length of query: 186
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 55
effective length of database: 2,992,500,243
effective search space: 164587513365
effective search space used: 164587513365
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 78 (34.2 bits)