HHsearch alignment for GI: 254780777 and conserved domain: PRK04531
>PRK04531 acetylglutamate kinase; Provisional.
Probab=99.24 E-value=2.7e-10 Score=83.06 Aligned_cols=217 Identities=16% Similarity=0.169 Sum_probs=120.9
Q ss_pred CCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HC------CCCCCCCHHHHH
Q ss_conf 82499999400368538877708999999999999999769909998236541023344-20------377775402467
Q gi|254780777|r 5 PYKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQV-VA------ENYLLCERSTVD 77 (242)
Q Consensus 5 ~~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~-~~------~~~~~~~~~~~~ 77 (242)
T Consensus 19 ~~~fAVIKvGGavi~e---------~l~~la~dLafL~~vGl~PVVVHGgGpqI~~~L~~~gIe~~fi~G~RVTd~etl~ 89 (421)
T PRK04531 19 PERFAVIKVGGAVLRE---------DLEALTSSLKFLQEVGLTPVVVHGAGPQLDAELSAAGIEKDTVNGLRVTSPEALA 89 (421)
T ss_pred CCEEEEEEECHHHHHH---------HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
T ss_conf 7618999988799997---------9999999999999879979999389877879999759997677963058888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH------------HHHHHHHHHCCHHHHCCCCCCCCCCC-----C
Q ss_conf 888889899999999999761886411340010024------------56654321000011001111124655-----6
Q gi|254780777|r 78 SMGMLSTVINALALDLALRKINVPTVILSSIFMPQV------------CEVFSCRNAVSYLSQGKVVIFSGGTG-----N 140 (242)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 140 (242)
T Consensus 90 vv~~vl~~~-n~~lV~~L~~~G~~A~~i~g~~~~a~~~d~~~~G~VG~V~~Vd~~~I~~~L~~g~IPVIapig~~~~Gq~ 168 (421)
T PRK04531 90 IVRKVFQAS-NLKLVEALQQNGARATSITGGVFEAEYLDRDTYGLVGEVKAVLLAAVRSSLRAGKIPVIASLGETPSGQI 168 (421)
T ss_pred HHHHHHHHH-HHHHHHHHHHCCCCEEECCCCCEECCCCCCCCCCCCCCEEEECHHHHHHHHHCCCEEEECCCEECCCCCE
T ss_conf 999999765-2999999996799757346654350336666676433347786899999997898269815315899978
Q ss_pred CCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH--------CCCCCCCHHHHHHHHHC-
Q ss_conf 777621578888864164466514754351234322344444444115999985--------59981409999999974-
Q gi|254780777|r 141 AFLTTDSAAALRASEIGADVILKGTQVDGVYSADPRVHASSTRFDSLTYNQFIE--------KGLKVMDCASVVLARDC- 211 (242)
Q Consensus 141 ~~~~~D~~a~~ia~~~~ad~l~i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~--------~G~~v~~~~A~~~a~~~- 211 (242)
T Consensus 169 lNINAD~aA~aLA~aL~a~KlIfLt~~gGi~d~~------gk~Is~InL~~eyd~lm~~~w~~~g~klkl~~ik~LLd~L 242 (421)
T PRK04531 169 LNINADVAANELVSILQPYKIIFLTGTGGLLDAD------GNKISSINLSTEFDQLMQQPSINGGMRLKLEQIKDLLDRL 242 (421)
T ss_pred EEECHHHHHHHHHHHCCCCEEEEECCCCCEECCC------CCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 8405999999999862864699971678606789------9886357544035545205103566899899999998519
Q ss_pred --CCCEEEEECCCCCHHHHHH-CCCCCCCEEC
Q ss_conf --9969995189854799997-7998782466
Q gi|254780777|r 212 --SIPIIVFSIHSPGGIWGGL-SGIGRSTIIS 240 (242)
Q Consensus 212 --gI~v~I~ng~~~~~i~~~l-~Ge~~GT~I~ 240 (242)
T Consensus 243 P~~SSV~It---~p~~L~kELFT~~GsGTLir 271 (421)
T PRK04531 243 PLESSVSIT---SPSDLAKELFTHKGSGTLVR 271 (421)
T ss_pred CCCCEEEEE---CHHHHHHHHCCCCCCCEEEE
T ss_conf 986607870---89998887626799960486