HHsearch alignment for GI: 254780777 and conserved domain: PRK08961

>PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional.
Probab=100.00  E-value=1.4e-34  Score=232.80  Aligned_cols=225  Identities=18%  Similarity=0.135  Sum_probs=155.3

Q ss_pred             CCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH-HCCCEEEEEECCCCC--HHHHHHHCCC-----------
Q ss_conf             68882499999400368538877708999999999999999-769909998236541--0233442037-----------
Q gi|254780777|r    2 SDFPYKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVY-AKGIEIGIVVGGGNI--FRGSQVVAEN-----------   67 (242)
Q Consensus         2 ~~~~~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~-~~g~~vviV~sg~~~--~~~~~~~~~~-----------   67 (242)
T Consensus         3 ~~~~~~wVV~KFGGTSVas-------~~~~~~Va~iI~~~~~~~g~rvvVVvSAm~gvTn~L~~la~~a~~~~~~l~~i~   75 (865)
T PRK08961          3 SPSADRWVVLKFGGTSVSR-------RHRWDTIAKLARKRLNETGGRVLVVVSALSGVTNELTAIADGAADSASRVAALE   75 (865)
T ss_pred             CCCCCCEEEECCCCCCCCC-------HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHH
T ss_conf             8888987998628466898-------999999999999999850998899985999863899999986421056788999


Q ss_pred             ---------CCC------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf             ---------777------------------------54024678888898999999999997618864113400100245
Q gi|254780777|r   68 ---------YLL------------------------CERSTVDSMGMLSTVINALALDLALRKINVPTVILSSIFMPQVC  114 (242)
Q Consensus        68 ---------~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (242)
T Consensus        76 ~~h~~i~~eL~~~~~~~l~~~l~~L~~ll~~i~~~~~s~~~~d~ilS~GE~lSt~l~a~~L~~~Gi~a~~lDar~~l~t~  155 (865)
T PRK08961         76 QRHREFLAELELDAQAVLANRLAALQALLTDARAATRALDWQAEVLGQGELLSSRLGAAYLHASGLDMGWLDAREWLTAL  155 (865)
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHCC
T ss_conf             99999999741005678999999999998666640578356345861737999999999999679981785689960014


Q ss_pred             ----------HH---HHHHH-----HCCHH-HHCCCCCCCCC---------CCCCCCCCHHHHHHHHHHHCHHHHHHCCC
Q ss_conf             ----------66---54321-----00001-10011111246---------55677762157888886416446651475
Q gi|254780777|r  115 ----------EV---FSCRN-----AVSYL-SQGKVVIFSGG---------TGNAFLTTDSAAALRASEIGADVILKGTQ  166 (242)
Q Consensus       115 ----------~~---~~~~~-----~~~~~-~~~~~~~~~~~---------~~~~~~~~D~~a~~ia~~~~ad~l~i~td  166 (242)
T Consensus       156 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~vvVtqGFiG~~~~G~tTTLGRGGSDySAallAaaL~A~~veIWTD  235 (865)
T PRK08961        156 PPQPNQSEWSQRLSVSCQWQSDAGWRARFAAQPAQVLITQGFIARHADGGTAILGRGGSDTSAAYFGALLGAARVEIWTD  235 (865)
T ss_pred             CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCEEECCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             67676430344433333330257889887505982799518335169998777079855899999999749988999858


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHC---CCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEECCC
Q ss_conf             43512343223444444441159999855---99814099999999749969995189854799997799878246689
Q gi|254780777|r  167 VDGVYSADPRVHASSTRFDSLTYNQFIEK---GLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIISGE  242 (242)
Q Consensus       167 vdGiyt~dP~~~~~ak~i~~is~~e~l~~---G~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~~~  242 (242)
T Consensus       236 VdGI~TaDPRiVp~Ar~I~~LSy~EA~ELA~fGAKVLHP~Ti~Pa~~~~IPv~VknT~~P---------e~~GT~I~~~  305 (865)
T PRK08961        236 VPGMFSANPKEVPDARLLTRLDYYEAQEIATTGAKVLHPRSIKPCRDAGVPMAILDTERP---------DLSGTSIDGN  305 (865)
T ss_pred             CCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCC---------CCCCCEEECC
T ss_conf             987866899878886587813899999999768752486667999976996798178998---------9997278489