HHsearch alignment for GI: 254780777 and conserved domain: PRK08961
>PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional.
Probab=100.00 E-value=1.4e-34 Score=232.80 Aligned_cols=225 Identities=18% Similarity=0.135 Sum_probs=155.3
Q ss_pred CCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH-HCCCEEEEEECCCCC--HHHHHHHCCC-----------
Q ss_conf 68882499999400368538877708999999999999999-769909998236541--0233442037-----------
Q gi|254780777|r 2 SDFPYKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVY-AKGIEIGIVVGGGNI--FRGSQVVAEN----------- 67 (242)
Q Consensus 2 ~~~~~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~-~~g~~vviV~sg~~~--~~~~~~~~~~----------- 67 (242)
T Consensus 3 ~~~~~~wVV~KFGGTSVas-------~~~~~~Va~iI~~~~~~~g~rvvVVvSAm~gvTn~L~~la~~a~~~~~~l~~i~ 75 (865)
T PRK08961 3 SPSADRWVVLKFGGTSVSR-------RHRWDTIAKLARKRLNETGGRVLVVVSALSGVTNELTAIADGAADSASRVAALE 75 (865)
T ss_pred CCCCCCEEEECCCCCCCCC-------HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 8888987998628466898-------999999999999999850998899985999863899999986421056788999
Q ss_pred ---------CCC------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf ---------777------------------------54024678888898999999999997618864113400100245
Q gi|254780777|r 68 ---------YLL------------------------CERSTVDSMGMLSTVINALALDLALRKINVPTVILSSIFMPQVC 114 (242)
Q Consensus 68 ---------~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (242)
T Consensus 76 ~~h~~i~~eL~~~~~~~l~~~l~~L~~ll~~i~~~~~s~~~~d~ilS~GE~lSt~l~a~~L~~~Gi~a~~lDar~~l~t~ 155 (865)
T PRK08961 76 QRHREFLAELELDAQAVLANRLAALQALLTDARAATRALDWQAEVLGQGELLSSRLGAAYLHASGLDMGWLDAREWLTAL 155 (865)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHCC
T ss_conf 99999999741005678999999999998666640578356345861737999999999999679981785689960014
Q ss_pred ----------HH---HHHHH-----HCCHH-HHCCCCCCCCC---------CCCCCCCCHHHHHHHHHHHCHHHHHHCCC
Q ss_conf ----------66---54321-----00001-10011111246---------55677762157888886416446651475
Q gi|254780777|r 115 ----------EV---FSCRN-----AVSYL-SQGKVVIFSGG---------TGNAFLTTDSAAALRASEIGADVILKGTQ 166 (242)
Q Consensus 115 ----------~~---~~~~~-----~~~~~-~~~~~~~~~~~---------~~~~~~~~D~~a~~ia~~~~ad~l~i~td 166 (242)
T Consensus 156 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~vvVtqGFiG~~~~G~tTTLGRGGSDySAallAaaL~A~~veIWTD 235 (865)
T PRK08961 156 PPQPNQSEWSQRLSVSCQWQSDAGWRARFAAQPAQVLITQGFIARHADGGTAILGRGGSDTSAAYFGALLGAARVEIWTD 235 (865)
T ss_pred CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCEEECCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 67676430344433333330257889887505982799518335169998777079855899999999749988999858
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHC---CCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEECCC
Q ss_conf 43512343223444444441159999855---99814099999999749969995189854799997799878246689
Q gi|254780777|r 167 VDGVYSADPRVHASSTRFDSLTYNQFIEK---GLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIISGE 242 (242)
Q Consensus 167 vdGiyt~dP~~~~~ak~i~~is~~e~l~~---G~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~~~ 242 (242)
T Consensus 236 VdGI~TaDPRiVp~Ar~I~~LSy~EA~ELA~fGAKVLHP~Ti~Pa~~~~IPv~VknT~~P---------e~~GT~I~~~ 305 (865)
T PRK08961 236 VPGMFSANPKEVPDARLLTRLDYYEAQEIATTGAKVLHPRSIKPCRDAGVPMAILDTERP---------DLSGTSIDGN 305 (865)
T ss_pred CCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCC---------CCCCCEEECC
T ss_conf 987866899878886587813899999999768752486667999976996798178998---------9997278489