HHsearch alignment for GI: 254780777 and conserved domain: PRK12443

Probab=100.00  E-value=0  Score=306.14  Aligned_cols=235  Identities=38%  Similarity=0.616  Sum_probs=221.4

Q ss_pred             CCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf             82499999400368538877708999999999999999769909998236541023344203777754024678888898
Q gi|254780777|r    5 PYKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQVVAENYLLCERSTVDSMGMLST   84 (242)
Q Consensus         5 ~~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (242)
T Consensus         3 ~ykRVllKlSGEaL~g~~~~g~d~~~l~~ia~eI~~~~~~G~evaiVvGGGNi~RG~~~~---~~gidr~~aD~iGMLaT   79 (247)
T PRK12443          3 PYKRVLIKLSGGALADQTGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIFRGHLAE---EWGIDRVEADNIGTLGT   79 (247)
T ss_pred             CCCEEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHH---HCCCCCCHHHHHHHHHH
T ss_conf             867899997388828999888799999999999999997798799997688502322365---53987310368889999


Q ss_pred             HHHHHHHHHHHHH-HCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHH
Q ss_conf             9999999999976-188641134001002456654321000011001111124655677762157888886416446651
Q gi|254780777|r   85 VINALALDLALRK-INVPTVILSSIFMPQVCEVFSCRNAVSYLSQGKVVIFSGGTGNAFLTTDSAAALRASEIGADVILK  163 (242)
Q Consensus        85 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~a~~ia~~~~ad~l~i  163 (242)
T Consensus        80 vmNal~L~~~l~~~~g~~~rv~sai~~~~v~e~y~~~rA~~~LekG~VVIfagGTGnP~fTTDtaAaLrA~Ei~Ad~lL~  159 (247)
T PRK12443         80 IINSLMLRGVLTSKTNKEVRVMTSIPFNAVAEPYIRLRAVHHLDNGYIVIFGGGNGQPFVTTDYPSVQRAIEMNSDAILV  159 (247)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHC
T ss_conf             99999999999975599469973233674567777899999973697899978878875204399999998828613321


Q ss_pred             CCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEECCC
Q ss_conf             475-4351234322344444444115999985599814099999999749969995189854799997799878246689
Q gi|254780777|r  164 GTQ-VDGVYSADPRVHASSTRFDSLTYNQFIEKGLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIISGE  242 (242)
Q Consensus       164 ~td-vdGiyt~dP~~~~~ak~i~~is~~e~l~~G~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~~~  242 (242)
T Consensus       160 at~~VDGVYd~DP~k~~dA~k~~~ls~~e~l~~~L~vMD~tA~~lc~~~~ipi~Vfn~~~~g~l~ka~~Ge~iGT~V~~~  239 (247)
T PRK12443        160 AKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQNIQVMDQAALLLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLINDD  239 (247)
T ss_pred             CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEECCC
T ss_conf             05665776468988999754443337999998699442999999999739988998289986399996799863288188