HHsearch alignment for GI: 254780777 and conserved domain: cd04234

>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=100.00  E-value=6.5e-34  Score=228.73  Aligned_cols=202  Identities=26%  Similarity=0.290  Sum_probs=155.4

Q ss_pred             EEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC--CHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             999940036853887770899999999999999976990999823654--102334420377775402467888889899
Q gi|254780777|r    9 VLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGN--IFRGSQVVAENYLLCERSTVDSMGMLSTVI   86 (242)
Q Consensus         9 IViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (242)
T Consensus         2 ~V~KFGGtSv~~-------~~~i~~v~~ii~~~-~~~~~~vVVvSA~~g~Td~L~~-------------~a~ils~GE~l   60 (227)
T cd04234           2 VVQKFGGTSVAS-------AERIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIE-------------LALLLSFGERL   60 (227)
T ss_pred             EEEEECCCCCCC-------HHHHHHHHHHHHHH-HCCCCEEEEECCCCCCHHHHHH-------------HHHHHHHHHHH
T ss_conf             899678301799-------99999999999865-4389889997388432899999-------------99999299999


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCHHHHHHHH----------HHHHHHCCHHHHCCCCCCCCC---------CCCCCCCCHH
Q ss_conf             999999999761886411340010024566----------543210000110011111246---------5567776215
Q gi|254780777|r   87 NALALDLALRKINVPTVILSSIFMPQVCEV----------FSCRNAVSYLSQGKVVIFSGG---------TGNAFLTTDS  147 (242)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~D~  147 (242)
T Consensus        61 Sa~lla~~L~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~Vv~GF~g~~~~G~~tTLGRGGSD~  140 (227)
T cd04234          61 SARLLAAALRDRGIKARSLDARQAGITTDDNHGAARIIEISYERLKELLAEIGKVPVVTGFIGRNEDGEITTLGRGGSDY  140 (227)
T ss_pred             HHHHHHHHHHHCCCCEEEECHHHCEEECCCCCCCEEEHHHCHHHHHHHHHHCCCEEEECCEEEECCCCCEEEECCCCHHH
T ss_conf             99999999997899719964157206416876520645428999999997389679962604540588468838885678


Q ss_pred             HHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC---CCCCCCHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf             788888641644665147543512343223444444441159999855---99814099999999749969995189854
Q gi|254780777|r  148 AAALRASEIGADVILKGTQVDGVYSADPRVHASSTRFDSLTYNQFIEK---GLKVMDCASVVLARDCSIPIIVFSIHSPG  224 (242)
Q Consensus       148 ~a~~ia~~~~ad~l~i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~~---G~~v~~~~A~~~a~~~gI~v~I~ng~~~~  224 (242)
T Consensus       141 TA~~lA~~l~A~~~~I~TDVdGi~taDPr~v~~A~~i~~lsy~Ea~ela~~GakVlHp~ti~pa~~~~Ipi~i~nt~~p-  219 (227)
T cd04234         141 SAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAYFGAKVLHPRAVEPARKANIPIRVKNTFNP-  219 (227)
T ss_pred             HHHHHHHHHCCHHHEEEECCCEEECCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCC-
T ss_conf             9999999818602222126870472799747886240441999999999779741699999999986983999289999-


Q ss_pred             HHHHHHCCCCCCCEEC
Q ss_conf             7999977998782466
Q gi|254780777|r  225 GIWGGLSGIGRSTIIS  240 (242)
Q Consensus       225 ~i~~~l~Ge~~GT~I~  240 (242)
T Consensus       220 --------~~~GT~Is  227 (227)
T cd04234         220 --------EAPGTLIT  227 (227)
T ss_pred             --------CCCCEEEC
T ss_conf             --------99981769