HHsearch alignment for GI: 254780777 and conserved domain: cd04245
>cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine.
Probab=100.00 E-value=1.8e-32 Score=219.80 Aligned_cols=214 Identities=19% Similarity=0.193 Sum_probs=152.1
Q ss_pred CEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC---------CHHHHHHHC-----------
Q ss_conf 249999940036853887770899999999999999976990999823654---------102334420-----------
Q gi|254780777|r 6 YKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGN---------IFRGSQVVA----------- 65 (242)
Q Consensus 6 ~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~---------~~~~~~~~~----------- 65 (242)
T Consensus 1 Mk--V~KFGGtSv~~-------~~~i~~v~~Ii~~--~~~~~-vVVVSA~g~~tn~~~gvTd~L~~~a~~~~~~~~~~~~ 68 (288)
T cd04245 1 MK--VVKFGGSSLAS-------AEQFQKVKAIVKA--DPERK-IVVVSAPGKRFKDDTKVTDLLILYAEAVLAGEDTESI 68 (288)
T ss_pred CE--EEEECCCCCCC-------HHHHHHHHHHHHC--CCCCE-EEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
T ss_conf 98--99888113589-------9999999999971--78980-9999089888675214799999999987568459999
Q ss_pred ---------------------------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf ---------------------------------37777540246788888989999999999976188641134001002
Q gi|254780777|r 66 ---------------------------------ENYLLCERSTVDSMGMLSTVINALALDLALRKINVPTVILSSIFMPQ 112 (242)
Q Consensus 66 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (242)
T Consensus 69 ~~~i~~~h~~~~~~l~~~~~~~~~l~~~l~~l~~~~~~~~~~~~d~i~s~GE~lSa~l~a~~L~~~Gi~a~~ld~~d~~i 148 (288)
T cd04245 69 FEAIVDRYAEIADELGLPMSILEEIAEILENLANLDYANPDYLLDALKARGEYLNAQLMAAYLNYQGIDARYVIPKDAGL 148 (288)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEE
T ss_conf 99999999999987466477999999999999871446855777687309999999999999996899839950000217
Q ss_pred H---------HHHHHHHHHCCHHHHCCCCCCCCC---------CCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCC
Q ss_conf 4---------566543210000110011111246---------5567776215788888641644665147543512343
Q gi|254780777|r 113 V---------CEVFSCRNAVSYLSQGKVVIFSGG---------TGNAFLTTDSAAALRASEIGADVILKGTQVDGVYSAD 174 (242)
Q Consensus 113 ~---------~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~D~~a~~ia~~~~ad~l~i~tdvdGiyt~d 174 (242)
T Consensus 149 ~~~~~~~~a~~~~~~~~~~~~~~~~~~v~Vv~GFig~~~~G~~ttLGRgGSDySAaiia~~l~A~~v~iwtDV~Gi~taD 228 (288)
T cd04245 149 VVTDEPGNAQILPESYQKIKKLRDSDEKLVIPGFYGYSKNGDIKTFSRGGSDITGAILARGFQADLYENFTDVDGIYAAN 228 (288)
T ss_pred EECCCCCCCEECHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCEEEECC
T ss_conf 84477653033275699999887059838982577753899764328983899999999975898899954798037379
Q ss_pred CCCCCCCCCCCCCCHHHHHHC---CCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEEC
Q ss_conf 223444444441159999855---998140999999997499699951898547999977998782466
Q gi|254780777|r 175 PRVHASSTRFDSLTYNQFIEK---GLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIIS 240 (242)
Q Consensus 175 P~~~~~ak~i~~is~~e~l~~---G~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~ 240 (242)
T Consensus 229 Pr~V~~A~~i~~lsy~EA~eLa~~GakVlHP~ti~P~~~~~Ipi~irnt~~p---------~~~GT~I~ 288 (288)
T cd04245 229 PRIVANPKPISEMTYREMRELSYAGFSVFHDEALIPAIEAGIPINIKNTNHP---------EAPGTLIV 288 (288)
T ss_pred CCCCCCCEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCC---------CCCCCEEC
T ss_conf 9857798687735999999999679851588999999985980899378999---------99985779