HHsearch alignment for GI: 254780777 and conserved domain: cd04249
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.81 E-value=1.9e-18 Score=133.35 Aligned_cols=217 Identities=18% Similarity=0.127 Sum_probs=135.3
Q ss_pred EEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC-CCEEEEEECCCCCHHHH-HHHCC------CCCCCCHHHHHHHH
Q ss_conf 999940036853887770899999999999999976-99099982365410233-44203------77775402467888
Q gi|254780777|r 9 VLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAK-GIEIGIVVGGGNIFRGS-QVVAE------NYLLCERSTVDSMG 80 (242)
Q Consensus 9 IViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~-g~~vviV~sg~~~~~~~-~~~~~------~~~~~~~~~~~~~~ 80 (242)
T Consensus 1 iVIK~GG~~l~~-------~~~~~~~~~~i~~l~~~~~~~vVlVHGggpqI~~~l~~~gi~~~f~~G~RvTd~~tl~vv~ 73 (252)
T cd04249 1 LVIKLGGALLET-------EAALEQLFSALSEYQQQHNRQLVIVHGGGCVVDELLKKLNFPSEKKNGLRVTPKEQIPYIT 73 (252)
T ss_pred CEEEECCHHCCC-------HHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHH
T ss_conf 989978246178-------8899999999999998189876998799689999999769997237965658999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--------------HHHHHHHHHHCCHHHHCCCCCCCCC----CC-CC
Q ss_conf 88989999999999976188641134001002--------------4566543210000110011111246----55-67
Q gi|254780777|r 81 MLSTVINALALDLALRKINVPTVILSSIFMPQ--------------VCEVFSCRNAVSYLSQGKVVIFSGG----TG-NA 141 (242)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~ 141 (242)
T Consensus 74 ~vl~g~vn~~lv~~l~~~g~~a~gl~~~dg~~~~~~~~~~dlG~vG~v~~Vn~~~i~~ll~~g~IPVisplg~~~~G~~~ 153 (252)
T cd04249 74 GALAGTANKQLMAQAIKAGLKPVGLSLADGGMTAVTQLDPELGAVGKATANDPSLLNDLLKAGFLPIISSIGADDQGQLM 153 (252)
T ss_pred HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECHHHHHHHHCCCCCCEECCCEECCCCCEE
T ss_conf 99846159999999973589862044567746873023666786555323557899998628987476353148999879
Q ss_pred CCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH-------CCCCCCCHHHHHHHHHCCC-
Q ss_conf 77621578888864164466514754351234322344444444115999985-------5998140999999997499-
Q gi|254780777|r 142 FLTTDSAAALRASEIGADVILKGTQVDGVYSADPRVHASSTRFDSLTYNQFIE-------KGLKVMDCASVVLARDCSI- 213 (242)
Q Consensus 142 ~~~~D~~a~~ia~~~~ad~l~i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~-------~G~~v~~~~A~~~a~~~gI- 213 (242)
T Consensus 154 NiNaD~~A~~iA~aL~A~-Li~ltdv~Gvld~------~g~li~~l~~~e~~~li~~~~i~gGMipKl~aa~~Al~~gv~ 226 (252)
T cd04249 154 NVNADQAATAIAQLLNAD-LVLLSDVSGVLDA------DKQLISELNAKQAAELIEQGVITDGMIVKVNAALDAAQSLRR 226 (252)
T ss_pred ECCHHHHHHHHHHHHCCC-EEEEECCCCEECC------CCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 759999999999971598-9999688613889------998942189999999997595479739999999999981998
Q ss_pred CEEEEECCCCCHHHHHHCCCCCCCEE
Q ss_conf 69995189854799997799878246
Q gi|254780777|r 214 PIIVFSIHSPGGIWGGLSGIGRSTII 239 (242)
Q Consensus 214 ~v~I~ng~~~~~i~~~l~Ge~~GT~I 239 (242)
T Consensus 227 ~v~I~~g~~~~~L~elft~~GiGT~I 252 (252)
T cd04249 227 GIDIASWQYPEQLTALLAGEPVGTKI 252 (252)
T ss_pred EEEEECCCCCHHHHHHHCCCCCCCCC
T ss_conf 79994389873899997599987739