HHsearch results for GI: 254780777 and protein with PDBid: 2brx_A
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=100.00 E-value=2.9e-42 Score=278.85 Aligned_cols=220 Identities=27% Similarity=0.357 Sum_probs=175.1
Q ss_pred CCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 88824999994003685388777089999999999999997699099982365410233442037777540246788888
Q gi|254780777|r 3 DFPYKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQVVAENYLLCERSTVDSMGML 82 (242)
Q Consensus 3 ~~~~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (242)
+-++||||||||||+|+++++ +.+++++++++|+++++ +++++||+|||.+++++........ ......+..+..
T Consensus 16 ~~~~~rIViKlGGs~lt~~~~---~~~~i~~la~~I~~l~~-~~~~vIVvggG~~a~~~~~~~~~~~-~~~~~~~~~~~~ 90 (244)
T 2brx_A 16 RGSHMRIVFDIGGSVLVPENP---DIDFIKEIAYQLTKVSE-DHEVAVVVGGGKLARKYIEVAEKFN-SSETFKDFIGIQ 90 (244)
T ss_dssp ---CCEEEEEECHHHHCSSSC---CHHHHHHHHHHHHHHHH-HSEEEEEECCHHHHHHHHHHHHTTT-CCHHHHHHHHHH
T ss_pred CCCCCEEEEEECHHHCCCCCC---CHHHHHHHHHHHHHHHC-CCCEEEEECCCHHHCCHHHHHHHHH-HHHHHHHHHHHH
T ss_conf 766467999965765289999---98999999999999986-9928999897867677588877655-426789999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHH
Q ss_conf 98999999999997618864113400100245665432100001100111112465567776215788888641644665
Q gi|254780777|r 83 STVINALALDLALRKINVPTVILSSIFMPQVCEVFSCRNAVSYLSQGKVVIFSGGTGNAFLTTDSAAALRASEIGADVIL 162 (242)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~a~~ia~~~~ad~l~ 162 (242)
.+..+..+....+...+.+......... ...++...++++.+. .++++||++|+++|.+++||.|+
T Consensus 91 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------~~~l~~~~ipii~~~--~~~~~nD~lAa~lA~~l~Ad~li 156 (244)
T 2brx_A 91 ITRANAMLLIAALREKAYPVVVEDFWEA------------WKAVQLKKIPVMGGT--HPGHTTDAVAALLAEFLKADLLV 156 (244)
T ss_dssp HHHHHHHHHHHHHGGGBCSSCBCSHHHH------------HHHHHTTCBCEECCC--STTCCHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHH------------HHHHHHCEEEEECCC--CCCCCCCHHHHHHHHHHCHHHHH
T ss_conf 9999999999998742165214789999------------987653203450588--99877429999999981816665
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC--------C-CCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCC
Q ss_conf 147543512343223444444441159999855--------9-9814099999999749969995189854799997799
Q gi|254780777|r 163 KGTQVDGVYSADPRVHASSTRFDSLTYNQFIEK--------G-LKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGI 233 (242)
Q Consensus 163 i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~~--------G-~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge 233 (242)
++||||||||+||+++|+|++|++++++|++++ | ++.++..|+++|.++||+++|+||++|++|.++++||
T Consensus 157 ~lTDVdGvyd~dP~~~~~AklI~~is~~e~~~~~~~~~~~~g~gg~~~k~Aa~~a~~~gi~v~I~ng~~~~~i~~~l~Ge 236 (244)
T 2brx_A 157 VITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKGIEKAGSSSVIDPLAAKIIARSGIKTIVIGKEDAKDLFRVIKGD 236 (244)
T ss_dssp EECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC--------CCSCHHHHHHHHHHTCCEEEECHHHHTCHHHHHTTC
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCC
T ss_conf 05677842347997688876635950788999973677668899811699999999889968997599975799997699
Q ss_pred CCCCEECC
Q ss_conf 87824668
Q gi|254780777|r 234 GRSTIISG 241 (242)
Q Consensus 234 ~~GT~I~~ 241 (242)
.+||+|.|
T Consensus 237 ~~GT~i~P 244 (244)
T 2brx_A 237 HNGTTIEP 244 (244)
T ss_dssp SSSEEECC
T ss_pred CCCEEECC
T ss_conf 99808649