HHsearch results for GI: 254780777 and protein with PDBid: 3ek6_A
>3ek6_A Uridylate kinase; UMPK unique GTP binding site, allosteric regulation, ATP-binding, cytoplasm kinase, nucleotide-binding; 2.34A {Xanthomonas campestris PV} PDB: 3ek5_A
Probab=100.00 E-value=0 Score=338.30 Aligned_cols=239 Identities=46% Similarity=0.791 Sum_probs=194.1
Q ss_pred CCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 96888249999940036853887770899999999999999976990999823654102334420377775402467888
Q gi|254780777|r 1 MSDFPYKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQVVAENYLLCERSTVDSMG 80 (242)
Q Consensus 1 m~~~~~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (242)
||++||||||||||||+|++++++++|.++|+++|++|++++++|++++||||||.+++.+..........+ .....
T Consensus 4 m~~~~~kRIViKiGgs~l~~~~~~~i~~~~i~~ia~~I~~l~~~G~~viiVssG~~~~~~~~~~~~~~~~~~---~~~~~ 80 (243)
T 3ek6_A 4 MSELSYRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGNIFRGAGLAASGMDRVT---GDHMG 80 (243)
T ss_dssp GGGCSCSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTTSCSTTTSCSSSCHHH---HHHHH
T ss_pred CCCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCH---HHHHH
T ss_conf 555777779999770001379998859999999999999999779879999535011104554036877672---99999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHH
Q ss_conf 88989999999999976188641134001002456654321000011001111124655677762157888886416446
Q gi|254780777|r 81 MLSTVINALALDLALRKINVPTVILSSIFMPQVCEVFSCRNAVSYLSQGKVVIFSGGTGNAFLTTDSAAALRASEIGADV 160 (242)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~a~~ia~~~~ad~ 160 (242)
..............+.....+..................+.....+.....++.....+.++++||++|+++|.+++||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dnD~laa~~A~~~~Ad~ 160 (243)
T 3ek6_A 81 MLATVINALAMQDALEKLGAKVRVMSAIKINDVCEDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADL 160 (243)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEESSCBTTTBEECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCH
T ss_conf 99999999999999996597526631000210135555999998765157632125333466686479999999847326
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEEC
Q ss_conf 65147543512343223444444441159999855998140999999997499699951898547999977998782466
Q gi|254780777|r 161 ILKGTQVDGVYSADPRVHASSTRFDSLTYNQFIEKGLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIIS 240 (242)
Q Consensus 161 l~i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~~G~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~ 240 (242)
|+++||||||||+||+.+++|+++++++++|++++|+|++|++|+++|+++|||++|+||++|++|.++++||.+||+|+
T Consensus 161 lii~TdVdGvy~~dP~~~~~a~~~~~i~~~e~~~~G~~~~k~~Aa~~a~~~gi~v~I~nG~~~~~i~~~l~g~~vGTlI~ 240 (243)
T 3ek6_A 161 LLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVIMQGLEVMDTAAFALARDSDLPLRIFGMSEPGVLLRILHGAQIGTLVQ 240 (243)
T ss_dssp EEEECSSSSCBSSCGGGCTTCCBCSEECHHHHHHHTCCSSCHHHHHHHHHTTCCEEEECCCSTTHHHHHHTTCCCSEEEC
T ss_pred HHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEEE
T ss_conf 54404557620589643444345403789999866984899999999998799689985899766999977998860882
Q ss_pred CC
Q ss_conf 89
Q gi|254780777|r 241 GE 242 (242)
Q Consensus 241 ~~ 242 (242)
++
T Consensus 241 ~~ 242 (243)
T 3ek6_A 241 GR 242 (243)
T ss_dssp CC
T ss_pred EC
T ss_conf 28