HHsearch results for GI: 254780777 and protein with PDBid: 3ek6_A

>3ek6_A Uridylate kinase; UMPK unique GTP binding site, allosteric regulation, ATP-binding, cytoplasm kinase, nucleotide-binding; 2.34A {Xanthomonas campestris PV} PDB: 3ek5_A
Probab=100.00  E-value=0  Score=338.30  Aligned_cols=239  Identities=46%  Similarity=0.791  Sum_probs=194.1

Q ss_pred             CCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf             96888249999940036853887770899999999999999976990999823654102334420377775402467888
Q gi|254780777|r    1 MSDFPYKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQVVAENYLLCERSTVDSMG   80 (242)
Q Consensus         1 m~~~~~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (242)
                      ||++||||||||||||+|++++++++|.++|+++|++|++++++|++++||||||.+++.+..........+   .....
T Consensus         4 m~~~~~kRIViKiGgs~l~~~~~~~i~~~~i~~ia~~I~~l~~~G~~viiVssG~~~~~~~~~~~~~~~~~~---~~~~~   80 (243)
T 3ek6_A            4 MSELSYRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQQAGAQVALVIGGGNIFRGAGLAASGMDRVT---GDHMG   80 (243)
T ss_dssp             GGGCSCSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTTSCSTTTSCSSSCHHH---HHHHH
T ss_pred             CCCCCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCH---HHHHH
T ss_conf             555777779999770001379998859999999999999999779879999535011104554036877672---99999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHH
Q ss_conf             88989999999999976188641134001002456654321000011001111124655677762157888886416446
Q gi|254780777|r   81 MLSTVINALALDLALRKINVPTVILSSIFMPQVCEVFSCRNAVSYLSQGKVVIFSGGTGNAFLTTDSAAALRASEIGADV  160 (242)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~a~~ia~~~~ad~  160 (242)
                      ..............+.....+..................+.....+.....++.....+.++++||++|+++|.+++||.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dnD~laa~~A~~~~Ad~  160 (243)
T 3ek6_A           81 MLATVINALAMQDALEKLGAKVRVMSAIKINDVCEDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAIEIGADL  160 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEESSCBTTTBEECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHHHHTCSE
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCH
T ss_conf             99999999999999996597526631000210135555999998765157632125333466686479999999847326


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEEC
Q ss_conf             65147543512343223444444441159999855998140999999997499699951898547999977998782466
Q gi|254780777|r  161 ILKGTQVDGVYSADPRVHASSTRFDSLTYNQFIEKGLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIIS  240 (242)
Q Consensus       161 l~i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~~G~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~  240 (242)
                      |+++||||||||+||+.+++|+++++++++|++++|+|++|++|+++|+++|||++|+||++|++|.++++||.+||+|+
T Consensus       161 lii~TdVdGvy~~dP~~~~~a~~~~~i~~~e~~~~G~~~~k~~Aa~~a~~~gi~v~I~nG~~~~~i~~~l~g~~vGTlI~  240 (243)
T 3ek6_A          161 LLKATKVDGVYDKDPKKHSDAVRYDSLTYDEVIMQGLEVMDTAAFALARDSDLPLRIFGMSEPGVLLRILHGAQIGTLVQ  240 (243)
T ss_dssp             EEEECSSSSCBSSCGGGCTTCCBCSEECHHHHHHHTCCSSCHHHHHHHHHTTCCEEEECCCSTTHHHHHHTTCCCSEEEC
T ss_pred             HHHCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEEE
T ss_conf             54404557620589643444345403789999866984899999999998799689985899766999977998860882


Q ss_pred             CC
Q ss_conf             89
Q gi|254780777|r  241 GE  242 (242)
Q Consensus       241 ~~  242 (242)
                      ++
T Consensus       241 ~~  242 (243)
T 3ek6_A          241 GR  242 (243)
T ss_dssp             CC
T ss_pred             EC
T ss_conf             28