PSIBLAST alignment of GI: 254780777 and protein with PDB id: 1ybd
>gi|61680562|pdb|1YBD|A Chain A, Crystal Structure Analysis Of Uridylate Kinase From Neisseria Meningitidis Length = 239
>gi|61680563|pdb|1YBD|B Chain B, Crystal Structure Analysis Of Uridylate Kinase From Neisseria Meningitidis Length = 239
Score = 155 bits (390), Expect = 8e-36, Method: Composition-based stats.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 3/238 (1%)
Query: 3 DFPYKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQ 62
YKRVLLK+SGE+L G FG++ D++ + +IAEV G+++GIVVGGGNIFRG
Sbjct: 4 QIKYKRVLLKLSGESLXGSDPFGINHDTIVQTVGEIAEVVKXGVQVGIVVGGGNIFRGVS 63
Query: 63 VVAENYLLCERSTVDSMGMLSTVINALALDLALRKINVPTVILSSIFMPQVCEVFSCRNA 122
A +R+T D G +TV NALAL A + + + S++ Q+ E ++ A
Sbjct: 64 AQA---GSXDRATADYXGXXATVXNALALKDAFETLGIKARVQSALSXQQIAETYARPKA 120
Query: 123 VSYLSQGKVVIFSGGTGNAFLTTDSAAALRASEIGADVILKGTQVDGVYSADPRVHASST 182
+ YL +GKVVIF+ GTGN F TTD+AAALR +E DV LK T VDGVY+ADP+ S+T
Sbjct: 121 IQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEXNCDVXLKATNVDGVYTADPKKDPSAT 180
Query: 183 RFDSLTYNQFIEKGLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIIS 240
R++++T+++ + K LKV D + L R+ + I+VF I G + ++G T++
Sbjct: 181 RYETITFDEALLKNLKVXDATAFALCRERKLNIVVFGIAKEGSLKRVITGEDEGTLVH 238