HHsearch alignment for GI: 254780778 and conserved domain: COG0264
>COG0264 Tsf Translation elongation factor Ts [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=660.74 Aligned_cols=275 Identities=46% Similarity=0.655 Sum_probs=261.0
Q ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC-CCCEEEEEEEE
Q ss_conf 97355899999998719998999999996299989999999982388998651033642200004407-88536999984
Q gi|254780778|r 1 MSKVSAVAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTKGAMAASKREGRKVSEGLIGIARDG-YKKASIVEVNV 79 (296)
Q Consensus 1 Ma~it~~~iK~LR~~Tgag~~dCKkAL~e~~gD~e~Ai~~LRkkG~~~A~Kk~~R~a~eG~v~~~~~~-~~~a~liEinc 79 (296)
T Consensus 1 m~~ita~~VKeLRe~TgAGMmdCKkAL~E~~Gd~EkAie~LR~kG~akA~KKa~R~AaEGli~~~~~~~~~~av~vEvN~ 80 (296)
T COG0264 1 MAEITAALVKELREKTGAGMMDCKKALEEANGDIEKAIEWLREKGIAKAAKKAGRIAAEGLIAAKVDGDGKKAVLVEVNC 80 (296)
T ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHCCCCHHCCEEEEEECCCCCEEEEEEEEC
T ss_conf 97545999999998859868999999998479899999999984557666644862102169999718886789999854
Q ss_pred ECCHHHCCHHHHHHHHHHHHHHHHCC-CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
Q ss_conf 03101022679999998887531033-56577864004100001467789999854343102444310222210000013
Q gi|254780778|r 80 ETDSLAKNTDFQSLVSNIAGIALSTD-GSLDNVLAMPFDHSGITVGDGIKQQIAITGECIKLRRSALLCVSEGVISSYLH 158 (296)
Q Consensus 80 ETDFVAkn~~F~~l~~~i~~~~l~~~-~~~~~~~~~~~~~~~~tv~d~i~~~ia~iGEnI~l~R~~~~~~~~~~v~~Y~H 158 (296)
T Consensus 81 ETDFVAkN~~F~~la~~ia~~~l~~~~~~ve~l~~~~~~-~~~tvee~~~~~~AkIGENi~lRR~~~~~~~~~~v~~Y~H 159 (296)
T COG0264 81 ETDFVAKNAEFQELANKIAKAALEKKPADVEELKAAFEP-GGKTVEEEIAALIAKIGENISLRRFAVLEAGDGVVGSYLH 159 (296)
T ss_pred CCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC-CCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEE
T ss_conf 642045774689999999999998385658999864403-6862999999999875234168888876157630788980
Q ss_pred CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 53234603443444303543215789998856556676543320458783627777665666776312578678997774
Q gi|254780778|r 159 ASPSEGLGSIGVLVALQSSAEDKELLSAIGEKIAVHVMLASPSVISVQMLDPSIVANKRAHYMTEALDSGKSGNIVEKIV 238 (296)
Q Consensus 159 ~~~~~~~GkigvlV~l~~~~~~~~~~~~~ak~iAmhiaA~~P~~l~~~~v~~~~i~~Ek~i~~~~~~~~gKp~~i~ekIv 238 (296)
T Consensus 160 ~~-----griGVlv~~~~~~----~~~~~ak~iAMHiAA~~P~~ls~~dV~~e~v~~Er~i~~~~~~~~gKP~~i~eKiV 230 (296)
T COG0264 160 GN-----GRIGVLVALKGGA----ADEELAKDIAMHIAAMNPQYLSREDVPAEVVEKEREIFLAQLKAEGKPENIVEKIV 230 (296)
T ss_pred CC-----CCEEEEEEEECCC----HHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 79-----7079999972463----27899998888998638732782128999999899999998774399699999998
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECC
Q ss_conf 01676664233302560002777439999987764207982899889876224
Q gi|254780778|r 239 NGKMQSFCKECVLLHQGFVVDPSKTVSDFLKESEKSIGASIEVVGVSHFVVGK 291 (296)
Q Consensus 239 ~Gkl~Kf~~E~~LleQ~fv~D~~~tV~~~l~e~~k~~g~~i~I~~F~R~~lGE 291 (296)
T Consensus 231 eGr~~Kf~~E~~Ll~Q~fV~d~~~TV~~~lke~------~~~v~~FvR~evGe 277 (296)
T COG0264 231 EGRMNKFLAEVCLLEQPFVKDPKKTVEQLLKEA------NAKVTEFVRFEVGE 277 (296)
T ss_pred HHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHC------CCEEEEEEEEECCC
T ss_conf 689998888872006840038610099999745------83361464431057