HHsearch alignment for GI: 254780778 and conserved domain: COG0264

>COG0264 Tsf Translation elongation factor Ts [Translation, ribosomal structure and biogenesis].
Probab=100.00  E-value=0  Score=660.74  Aligned_cols=275  Identities=46%  Similarity=0.655  Sum_probs=261.0

Q ss_pred             CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC-CCCEEEEEEEE
Q ss_conf             97355899999998719998999999996299989999999982388998651033642200004407-88536999984
Q gi|254780778|r    1 MSKVSAVAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTKGAMAASKREGRKVSEGLIGIARDG-YKKASIVEVNV   79 (296)
Q Consensus         1 Ma~it~~~iK~LR~~Tgag~~dCKkAL~e~~gD~e~Ai~~LRkkG~~~A~Kk~~R~a~eG~v~~~~~~-~~~a~liEinc   79 (296)
T Consensus         1 m~~ita~~VKeLRe~TgAGMmdCKkAL~E~~Gd~EkAie~LR~kG~akA~KKa~R~AaEGli~~~~~~~~~~av~vEvN~   80 (296)
T COG0264           1 MAEITAALVKELREKTGAGMMDCKKALEEANGDIEKAIEWLREKGIAKAAKKAGRIAAEGLIAAKVDGDGKKAVLVEVNC   80 (296)
T ss_pred             CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHCCCCHHCCEEEEEECCCCCEEEEEEEEC
T ss_conf             97545999999998859868999999998479899999999984557666644862102169999718886789999854


Q ss_pred             ECCHHHCCHHHHHHHHHHHHHHHHCC-CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
Q ss_conf             03101022679999998887531033-56577864004100001467789999854343102444310222210000013
Q gi|254780778|r   80 ETDSLAKNTDFQSLVSNIAGIALSTD-GSLDNVLAMPFDHSGITVGDGIKQQIAITGECIKLRRSALLCVSEGVISSYLH  158 (296)
Q Consensus        80 ETDFVAkn~~F~~l~~~i~~~~l~~~-~~~~~~~~~~~~~~~~tv~d~i~~~ia~iGEnI~l~R~~~~~~~~~~v~~Y~H  158 (296)
T Consensus        81 ETDFVAkN~~F~~la~~ia~~~l~~~~~~ve~l~~~~~~-~~~tvee~~~~~~AkIGENi~lRR~~~~~~~~~~v~~Y~H  159 (296)
T COG0264          81 ETDFVAKNAEFQELANKIAKAALEKKPADVEELKAAFEP-GGKTVEEEIAALIAKIGENISLRRFAVLEAGDGVVGSYLH  159 (296)
T ss_pred             CCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC-CCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEE
T ss_conf             642045774689999999999998385658999864403-6862999999999875234168888876157630788980


Q ss_pred             CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             53234603443444303543215789998856556676543320458783627777665666776312578678997774
Q gi|254780778|r  159 ASPSEGLGSIGVLVALQSSAEDKELLSAIGEKIAVHVMLASPSVISVQMLDPSIVANKRAHYMTEALDSGKSGNIVEKIV  238 (296)
Q Consensus       159 ~~~~~~~GkigvlV~l~~~~~~~~~~~~~ak~iAmhiaA~~P~~l~~~~v~~~~i~~Ek~i~~~~~~~~gKp~~i~ekIv  238 (296)
T Consensus       160 ~~-----griGVlv~~~~~~----~~~~~ak~iAMHiAA~~P~~ls~~dV~~e~v~~Er~i~~~~~~~~gKP~~i~eKiV  230 (296)
T COG0264         160 GN-----GRIGVLVALKGGA----ADEELAKDIAMHIAAMNPQYLSREDVPAEVVEKEREIFLAQLKAEGKPENIVEKIV  230 (296)
T ss_pred             CC-----CCEEEEEEEECCC----HHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf             79-----7079999972463----27899998888998638732782128999999899999998774399699999998


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECC
Q ss_conf             01676664233302560002777439999987764207982899889876224
Q gi|254780778|r  239 NGKMQSFCKECVLLHQGFVVDPSKTVSDFLKESEKSIGASIEVVGVSHFVVGK  291 (296)
Q Consensus       239 ~Gkl~Kf~~E~~LleQ~fv~D~~~tV~~~l~e~~k~~g~~i~I~~F~R~~lGE  291 (296)
T Consensus       231 eGr~~Kf~~E~~Ll~Q~fV~d~~~TV~~~lke~------~~~v~~FvR~evGe  277 (296)
T COG0264         231 EGRMNKFLAEVCLLEQPFVKDPKKTVEQLLKEA------NAKVTEFVRFEVGE  277 (296)
T ss_pred             HHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHC------CCEEEEEEEEECCC
T ss_conf             689998888872006840038610099999745------83361464431057