HHsearch results for GI: 254780778 and protein with PDBid: 1vdl_A

>1vdl_A Ubiquitin carboxyl-terminal hydrolase 25; UBA domain, mouse cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.5.2.1

Probab=90.62  E-value=0.38  Score=26.99  Aligned_cols=38  Identities=32%  Similarity=0.427  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHCCC-HHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf             9999999871999-8999999996299989999999982
Q gi|254780778|r    7 VAVKELRGKTGAG-IMDCKNALLEAKGDSELAIDILRTK   44 (296)
Q Consensus         7 ~~iK~LR~~Tgag-~~dCKkAL~e~~gD~e~Ai~~LRkk   44 (296)
                      .++.+||+.||-- ..---+||..++||+..|+-+|-.+
T Consensus        26 ~lLNQLrEITGI~D~q~Lq~ALkas~Gdl~~AV~~LT~~   64 (80)
T 1vdl_A           26 TFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAK   64 (80)
T ss_dssp             HHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCC
T ss_conf             999999997376849999999980378899999998527