HHsearch results for GI: 254780778 and protein with PDBid: 1whc_A

>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=92.94  E-value=0.089  Score=31.14  Aligned_cols=41  Identities=22%  Similarity=0.135  Sum_probs=33.2

Q ss_pred             CCCHHHHHHHHHHHCCCHHHHHHHHHHCCC-CHHHHHHHHHHH
Q ss_conf             355899999998719998999999996299-989999999982
Q gi|254780778|r    3 KVSAVAVKELRGKTGAGIMDCKNALLEAKG-DSELAIDILRTK   44 (296)
Q Consensus         3 ~it~~~iK~LR~~Tgag~~dCKkAL~e~~g-D~e~Ai~~LRkk   44 (296)
                      .+....|++|=+ -|-+--.|++||..+++ ++|.|++||-..
T Consensus         7 ~vd~~~l~~L~~-MGF~~~~a~~AL~~t~n~~~e~A~~Wl~~h   48 (64)
T 1whc_A            7 GAELTALESLIE-MGFPRGRAEKALALTGNQGIEAAMDWLMEH   48 (64)
T ss_dssp             CCCCCHHHHHHT-TTCCHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHH-CCCCHHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf             679999999999-599999999999994799999999999987