HHsearch results for GI: 254780778 and protein with PDBid: 3mmp_A
>3mmp_A Elongation factor TU 2, elongation factor TS; RDRP,HOST-factor complex, translation, transferase; HET: PXN; 2.50A {Escherichia coli}
Probab=100.00 E-value=0 Score=649.29 Aligned_cols=264 Identities=39% Similarity=0.586 Sum_probs=247.4
Q ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEE
Q ss_conf 97355899999998719998999999996299989999999982388998651033642200004407885369999840
Q gi|254780778|r 1 MSKVSAVAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTKGAMAASKREGRKVSEGLIGIARDGYKKASIVEVNVE 80 (296)
Q Consensus 1 Ma~it~~~iK~LR~~Tgag~~dCKkAL~e~~gD~e~Ai~~LRkkG~~~A~Kk~~R~a~eG~v~~~~~~~~~a~liEincE 80 (296)
||+|||++||+||++||||||||||||+|++||+|+|++||||+|+++|+||++|.|+||+|+++.++ +.|+|+|||||
T Consensus 1 m~~ita~~vk~LR~~Tg~g~~~ckkAL~e~~gd~e~A~~~Lr~~G~~~a~k~~~r~~~eG~i~~~~~~-~~~~~velncE 79 (678)
T 3mmp_A 1 MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADGVIKTKIDG-NYGIILEVNCQ 79 (678)
T ss_dssp ---CCHHHHHHHHHHHCCCHHHHHHHTTTTTTCHHHHHHHHHHHHHHHHHHHTTSCCCEEEEEEEEET-TEEEEEEEEES
T ss_pred CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC-CEEEEEEEECC
T ss_conf 98668999999998869849999999988699899999999996689888645964357589999759-99999999813
Q ss_pred CCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
Q ss_conf 31010226799999988875310335657786400410000146778999985434310244431022221000001353
Q gi|254780778|r 81 TDSLAKNTDFQSLVSNIAGIALSTDGSLDNVLAMPFDHSGITVGDGIKQQIAITGECIKLRRSALLCVSEGVISSYLHAS 160 (296)
Q Consensus 81 TDFVAkn~~F~~l~~~i~~~~l~~~~~~~~~~~~~~~~~~~tv~d~i~~~ia~iGEnI~l~R~~~~~~~~~~v~~Y~H~~ 160 (296)
|||||||+.|++|++.+++.++.++.+..+.+ ..+++|.+.++++++||||+|+|+..+ +++++++|.|+
T Consensus 80 TDFVarn~~F~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~~~~~i~~igEni~l~r~~~~--~~~~~~~y~h~- 149 (678)
T 3mmp_A 80 TDFVAKDAGFQAFADKVLDAAVAGKITDVEVL-------KAQFEEERVALVAKIGENINIRRVAAL--EGDVLGSYQHG- 149 (678)
T ss_dssp CHHHHHCHHHHHHHHHHHHHHHHTTCCCHHHH-------HHHHHHHHHHHHHHHCSCCEEEEEEEE--ECSEEEEEEET-
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH-------HHHHHHHHHHHHHHHCCCEEEEEEEEE--ECCEEEEEECC-
T ss_conf 74650885799999999999974698778988-------606888999998861761899579986--18767999739-
Q ss_pred CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 23460344344430354321578999885655667654332045878362777766566677631257867899777401
Q gi|254780778|r 161 PSEGLGSIGVLVALQSSAEDKELLSAIGEKIAVHVMLASPSVISVQMLDPSIVANKRAHYMTEALDSGKSGNIVEKIVNG 240 (296)
Q Consensus 161 ~~~~~GkigvlV~l~~~~~~~~~~~~~ak~iAmhiaA~~P~~l~~~~v~~~~i~~Ek~i~~~~~~~~gKp~~i~ekIv~G 240 (296)
|+||+||++++.+. +++|+||||||||+|.||++++||++++++|++++++++.++|||++|++||++|
T Consensus 150 -----~kig~lv~~~~~~~------~~~k~iamhiaa~~P~~~~~~~v~~~~i~~e~~i~~~~~~~~gKp~~i~ekiv~G 218 (678)
T 3mmp_A 150 -----ARIGVLVAAKGADE------ELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG 218 (678)
T ss_dssp -----TTEEEEEEEESCCH------HHHHHHHHHHHHHCCSBSSGGGSCTTTSTTHHHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred -----CEEEEEEEECCCCH------HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf -----84999999558859------9987556886143877244134987888889999999998759968999876430
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCC
Q ss_conf 6766642333025600027774399999877642079828998898762241
Q gi|254780778|r 241 KMQSFCKECVLLHQGFVVDPSKTVSDFLKESEKSIGASIEVVGVSHFVVGKE 292 (296)
Q Consensus 241 kl~Kf~~E~~LleQ~fv~D~~~tV~~~l~e~~k~~g~~i~I~~F~R~~lGE~ 292 (296)
||+|||+|+|||+||||+||++||++||+++ +++|++|+||+|||.
T Consensus 219 kl~kf~~e~~Ll~Q~fv~d~~~tV~~~l~~~------~~~i~~f~R~~vGe~ 264 (678)
T 3mmp_A 219 RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEH------NAEVTGFIRFEVGEG 264 (678)
T ss_dssp HHHHHHHHTBGGGSEETTEEEEEHHHHHHHT------TCEEEEEEEEETTTT
T ss_pred HHHHHHHHHEECCCCCCCCCCCCHHHHHHHC------CCEEEEEEEEECCCC
T ss_conf 0211234414256851259963699999877------998989999973684