HHsearch results for GI: 254780778 and protein with PDBid: 3mmp_A

>3mmp_A Elongation factor TU 2, elongation factor TS; RDRP,HOST-factor complex, translation, transferase; HET: PXN; 2.50A {Escherichia coli}
Probab=100.00  E-value=0  Score=649.29  Aligned_cols=264  Identities=39%  Similarity=0.586  Sum_probs=247.4

Q ss_pred             CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEE
Q ss_conf             97355899999998719998999999996299989999999982388998651033642200004407885369999840
Q gi|254780778|r    1 MSKVSAVAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTKGAMAASKREGRKVSEGLIGIARDGYKKASIVEVNVE   80 (296)
Q Consensus         1 Ma~it~~~iK~LR~~Tgag~~dCKkAL~e~~gD~e~Ai~~LRkkG~~~A~Kk~~R~a~eG~v~~~~~~~~~a~liEincE   80 (296)
                      ||+|||++||+||++||||||||||||+|++||+|+|++||||+|+++|+||++|.|+||+|+++.++ +.|+|+|||||
T Consensus         1 m~~ita~~vk~LR~~Tg~g~~~ckkAL~e~~gd~e~A~~~Lr~~G~~~a~k~~~r~~~eG~i~~~~~~-~~~~~velncE   79 (678)
T 3mmp_A            1 MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADGVIKTKIDG-NYGIILEVNCQ   79 (678)
T ss_dssp             ---CCHHHHHHHHHHHCCCHHHHHHHTTTTTTCHHHHHHHHHHHHHHHHHHHTTSCCCEEEEEEEEET-TEEEEEEEEES
T ss_pred             CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC-CEEEEEEEECC
T ss_conf             98668999999998869849999999988699899999999996689888645964357589999759-99999999813


Q ss_pred             CCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
Q ss_conf             31010226799999988875310335657786400410000146778999985434310244431022221000001353
Q gi|254780778|r   81 TDSLAKNTDFQSLVSNIAGIALSTDGSLDNVLAMPFDHSGITVGDGIKQQIAITGECIKLRRSALLCVSEGVISSYLHAS  160 (296)
Q Consensus        81 TDFVAkn~~F~~l~~~i~~~~l~~~~~~~~~~~~~~~~~~~tv~d~i~~~ia~iGEnI~l~R~~~~~~~~~~v~~Y~H~~  160 (296)
                      |||||||+.|++|++.+++.++.++.+..+.+       ..+++|.+.++++++||||+|+|+..+  +++++++|.|+ 
T Consensus        80 TDFVarn~~F~~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~~~~~i~~igEni~l~r~~~~--~~~~~~~y~h~-  149 (678)
T 3mmp_A           80 TDFVAKDAGFQAFADKVLDAAVAGKITDVEVL-------KAQFEEERVALVAKIGENINIRRVAAL--EGDVLGSYQHG-  149 (678)
T ss_dssp             CHHHHHCHHHHHHHHHHHHHHHHTTCCCHHHH-------HHHHHHHHHHHHHHHCSCCEEEEEEEE--ECSEEEEEEET-
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH-------HHHHHHHHHHHHHHHCCCEEEEEEEEE--ECCEEEEEECC-
T ss_conf             74650885799999999999974698778988-------606888999998861761899579986--18767999739-


Q ss_pred             CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf             23460344344430354321578999885655667654332045878362777766566677631257867899777401
Q gi|254780778|r  161 PSEGLGSIGVLVALQSSAEDKELLSAIGEKIAVHVMLASPSVISVQMLDPSIVANKRAHYMTEALDSGKSGNIVEKIVNG  240 (296)
Q Consensus       161 ~~~~~GkigvlV~l~~~~~~~~~~~~~ak~iAmhiaA~~P~~l~~~~v~~~~i~~Ek~i~~~~~~~~gKp~~i~ekIv~G  240 (296)
                           |+||+||++++.+.      +++|+||||||||+|.||++++||++++++|++++++++.++|||++|++||++|
T Consensus       150 -----~kig~lv~~~~~~~------~~~k~iamhiaa~~P~~~~~~~v~~~~i~~e~~i~~~~~~~~gKp~~i~ekiv~G  218 (678)
T 3mmp_A          150 -----ARIGVLVAAKGADE------ELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG  218 (678)
T ss_dssp             -----TTEEEEEEEESCCH------HHHHHHHHHHHHHCCSBSSGGGSCTTTSTTHHHHHHHHHTTSCCCHHHHHHHHHH
T ss_pred             -----CEEEEEEEECCCCH------HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             -----84999999558859------9987556886143877244134987888889999999998759968999876430


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCC
Q ss_conf             6766642333025600027774399999877642079828998898762241
Q gi|254780778|r  241 KMQSFCKECVLLHQGFVVDPSKTVSDFLKESEKSIGASIEVVGVSHFVVGKE  292 (296)
Q Consensus       241 kl~Kf~~E~~LleQ~fv~D~~~tV~~~l~e~~k~~g~~i~I~~F~R~~lGE~  292 (296)
                      ||+|||+|+|||+||||+||++||++||+++      +++|++|+||+|||.
T Consensus       219 kl~kf~~e~~Ll~Q~fv~d~~~tV~~~l~~~------~~~i~~f~R~~vGe~  264 (678)
T 3mmp_A          219 RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEH------NAEVTGFIRFEVGEG  264 (678)
T ss_dssp             HHHHHHHHTBGGGSEETTEEEEEHHHHHHHT------TCEEEEEEEEETTTT
T ss_pred             HHHHHHHHHEECCCCCCCCCCCCHHHHHHHC------CCEEEEEEEEECCCC
T ss_conf             0211234414256851259963699999877------998989999973684