HHSEARCH alignment of GI: 254780778 and SCOP domain: d1v92a_

Alignment

Probab=90.05  E-value=0.28  Score=26.21  Aligned_cols=45  Identities=24%  Similarity=0.219  Sum_probs=38.3

Q ss_pred             CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             973558999999987199989999999962999899999999823
Q gi|254780778|r    1 MSKVSAVAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTKG   45 (296)
Q Consensus         1 Ma~it~~~iK~LR~~Tgag~~dCKkAL~e~~gD~e~Ai~~LRkkG   45 (296)
                      ||.---.+|.+....||+.--.++.-|+.++||++.|+..--..|
T Consensus         1 ma~~~~~lI~qF~~iTg~~~~~A~~~Le~~~w~Le~Ai~~yfe~g   45 (46)
T d1v92a_           1 MAEERQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG   45 (46)
T ss_dssp             CTTHHHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
T ss_conf             976399999999999895999999999995996999999998658

SCOP domain information

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: TAP-C domain-like
domain: NSFL1 (p97 ATPase) cofactor p47, UBA-like domain
species: Rat (Rattus norvegicus) [TaxId: 10116]