HHSEARCH alignment of GI: 254780778 and SCOP domain: d1vdla_

Alignment
>d1vdla_ a.5.2.1 (A:) Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.49  E-value=0.23  Score=26.86  Aligned_cols=39  Identities=31%  Similarity=0.420  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHCCC-HHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             9999999871999-89999999962999899999999823
Q gi|254780778|r    7 VAVKELRGKTGAG-IMDCKNALLEAKGDSELAIDILRTKG   45 (296)
Q Consensus         7 ~~iK~LR~~Tgag-~~dCKkAL~e~~gD~e~Ai~~LRkkG   45 (296)
                      .++.+||+.||-- ..---.||..++||+..|+-+|-.+-
T Consensus        26 ~lLNQLrEITGIqD~q~L~~ALkas~Gdl~~AV~~LT~~~   65 (80)
T d1vdla_          26 TFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKN   65 (80)
T ss_dssp             HHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC
T ss_conf             9999999973778599999999803788999999986278


SCOP domain information

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin carboxyl-terminal hydrolase 25
species: Mouse (Mus musculus) [TaxId: 10090]