HHSEARCH alignment of GI: 254780778 and SCOP domain: d1whca_

Alignment

Probab=93.55  E-value=0.036  Score=32.15  Aligned_cols=41  Identities=22%  Similarity=0.135  Sum_probs=32.8

Q ss_pred             CCCHHHHHHHHHHHCCCHHHHHHHHHHCCC-CHHHHHHHHHHH
Q ss_conf             355899999998719998999999996299-989999999982
Q gi|254780778|r    3 KVSAVAVKELRGKTGAGIMDCKNALLEAKG-DSELAIDILRTK   44 (296)
Q Consensus         3 ~it~~~iK~LR~~Tgag~~dCKkAL~e~~g-D~e~Ai~~LRkk   44 (296)
                      .+..++|.+|=+ -|-+--.|++||..++| |+|.|++||-..
T Consensus         7 ~~d~~~l~~L~~-MGF~~~~a~~AL~~t~n~~~e~A~~Wl~~h   48 (64)
T d1whca_           7 GAELTALESLIE-MGFPRGRAEKALALTGNQGIEAAMDWLMEH   48 (64)
T ss_dssp             CCCCCHHHHHHT-TTCCHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHH-CCCCHHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf             559999999999-599999999999994899999999999987

SCOP domain information

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: UBA/UBX 33.3 kDa protein
species: Mouse (Mus musculus) [TaxId: 10090]