HHSEARCH alignment of GI: 254780778 and SCOP domain: d1wj7a1

Alignment

Probab=94.95  E-value=0.021  Score=33.68  Aligned_cols=39  Identities=33%  Similarity=0.426  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             999999987199989999999962999899999999823
Q gi|254780778|r    7 VAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTKG   45 (296)
Q Consensus         7 ~~iK~LR~~Tgag~~dCKkAL~e~~gD~e~Ai~~LRkkG   45 (296)
                      ..||+|.+.||.+--+|-=||-.|++|+..||.+|-+-+
T Consensus        34 ~kVkql~e~T~rsede~~~ALhDcn~D~~~AIn~lLEg~   72 (91)
T d1wj7a1          34 EKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGN   72 (91)
T ss_dssp             HHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCC
T ss_conf             999999999678899999998517853999999999557

SCOP domain information

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 2-like Ubap2l
species: Mouse (Mus musculus) [TaxId: 10090]