HHSEARCH alignment of GI: 254780778 and SCOP domain: d2daha1

Alignment

Probab=93.82  E-value=0.069  Score=30.30  Aligned_cols=37  Identities=27%  Similarity=0.325  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf             9999999871999899999999629998999999998
Q gi|254780778|r    7 VAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRT   43 (296)
Q Consensus         7 ~~iK~LR~~Tgag~~dCKkAL~e~~gD~e~Ai~~LRk   43 (296)
                      ..+-+||++-=.----|-.||..++||+++||+.|..
T Consensus         4 ~QL~~L~~MGF~d~~~Ni~AL~~t~Gdv~~Aie~Ll~   40 (41)
T d2daha1           4 VQLEQLRSMGFLNREANLQALIATGGDVDAAVEKLRQ   40 (41)
T ss_dssp             HHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf             9999999859997899999999839989999999975

SCOP domain information

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquilin-3
species: Human (Homo sapiens) [TaxId: 9606]