RPSBLAST alignment of GI: 254780778 and protein with PDBid: 1aip
>1aip_C EF-TS, elongation factor TS; nucleotide exchange, GTP-binding, complex of two elongation factors; 3.00A {Thermus thermophilus} SCOP: a.5.2.2 d.43.1.1 Length = 196
Score = 82.1 bits (202), Expect = 1e-16
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Query: 1 MSKVSAVAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTKGAMAASKREGRKVSEG 60
MS++ + K+LR TGAG+MD K AL +A D E A+ +LR +GAM A+K+ R+ EG
Sbjct: 1 MSQMELI--KKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREG 58
Query: 61 LIGIA-RDGYKKASIVEVNVETDSLAKNTDFQSLVSNIAGIALSTDGSLDNVLAMPFDH 118
+IG + +VE+N ETD +A+N FQ+L ++A + + +P +
Sbjct: 59 IIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEE 117