HHsearch alignment of GI: 254780780 and MMDB domain: 1vlr_A_183-322

>1vlr_A (A:183-322) MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus}
Probab=99.90  E-value=4.1e-24  Score=171.22  Aligned_cols=104  Identities=20%  Similarity=0.180  Sum_probs=91.7

Q ss_pred             HHHCCCCCCC-EEEECC----EEEEEECCCC----CCCCEEEEEECCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             4446888731-787789----0999941788----8982299994155-4213440278889899999973044553135
Q gi|254780780|r   17 KIIRNETNAC-RVYEDD----ILLAIMDIMP----RNPGHVLIIPKSR-IRDIFEAPPEILSQIAFLIKKIAIACKSAFQ   86 (155)
Q Consensus        17 ~Ii~ge~p~~-~v~E~d----~~~afld~~P----~~~GH~lViPk~H-~~~l~dL~~~~~~~l~~~~~~v~~al~~~~~   86 (155)
                      +|++|++|+. ++|||+    .++||+|++|    ..|||+|||||+| ++++.||+++++..++.+++++++++++.++
T Consensus         7 kii~~~~~~~~ii~ed~~~~~~~v~f~D~~p~~~p~~~gH~LViPk~h~v~~~~dL~~~~~~~l~~~~~~~~~~l~~~~~   86 (140)
T 1vlr_A            7 NILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQ   86 (140)
T ss_dssp             HHHTC----CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHCCCCCCEEEEECCCCCCCEEEECCCCCCCCCHHCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             88617766541798579987887992455668875211589999866888872668686899999999999999999839


Q ss_pred             CCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCC
Q ss_conf             266699982575668631010699995237997653
Q gi|254780780|r   87 ADGIQILQFNGHAAGQTVPHLHFHVIPCKNGDNASH  122 (155)
Q Consensus        87 ~~~~ni~~~~g~~~gq~V~HlH~HiiPR~~~d~~~~  122 (155)
                      ++++++  ++|..+||+|+|+|+|||||+..++...
T Consensus        87 ~~~~~~--~~g~~agq~v~HlHiHiipr~~~~~~~~  120 (140)
T 1vlr_A           87 VTGDRL--RVYLHYLPSYYHLHVHFTALGFEAPGSG  120 (140)
T ss_dssp             CCGGGE--EEEEESSCSSSSCEEEEEETTSCCTTCB
T ss_pred             CCHHHE--EEEEECCCCCCCEEEEEEECCCCCCCCC
T ss_conf             986787--9998069974546999973357787642