HHsearch alignment of GI: 254780780 and MMDB domain: 1vlr_A_183-322
>1vlr_A (A:183-322) MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus}
Probab=99.90 E-value=4.1e-24 Score=171.22 Aligned_cols=104 Identities=20% Similarity=0.180 Sum_probs=91.7
Q ss_pred HHHCCCCCCC-EEEECC----EEEEEECCCC----CCCCEEEEEECCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 4446888731-787789----0999941788----8982299994155-4213440278889899999973044553135
Q gi|254780780|r 17 KIIRNETNAC-RVYEDD----ILLAIMDIMP----RNPGHVLIIPKSR-IRDIFEAPPEILSQIAFLIKKIAIACKSAFQ 86 (155)
Q Consensus 17 ~Ii~ge~p~~-~v~E~d----~~~afld~~P----~~~GH~lViPk~H-~~~l~dL~~~~~~~l~~~~~~v~~al~~~~~ 86 (155)
+|++|++|+. ++|||+ .++||+|++| ..|||+|||||+| ++++.||+++++..++.+++++++++++.++
T Consensus 7 kii~~~~~~~~ii~ed~~~~~~~v~f~D~~p~~~p~~~gH~LViPk~h~v~~~~dL~~~~~~~l~~~~~~~~~~l~~~~~ 86 (140)
T 1vlr_A 7 NILDKKAEADRIVFENPDPSDGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAILKRYQ 86 (140)
T ss_dssp HHHTC----CCCSEEECCTTTCEEEEECTTCCSSCSTTCEEEEEESSSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCCEEEEECCCCCCCEEEECCCCCCCCCHHCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 88617766541798579987887992455668875211589999866888872668686899999999999999999839
Q ss_pred CCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCC
Q ss_conf 266699982575668631010699995237997653
Q gi|254780780|r 87 ADGIQILQFNGHAAGQTVPHLHFHVIPCKNGDNASH 122 (155)
Q Consensus 87 ~~~~ni~~~~g~~~gq~V~HlH~HiiPR~~~d~~~~ 122 (155)
++++++ ++|..+||+|+|+|+|||||+..++...
T Consensus 87 ~~~~~~--~~g~~agq~v~HlHiHiipr~~~~~~~~ 120 (140)
T 1vlr_A 87 VTGDRL--RVYLHYLPSYYHLHVHFTALGFEAPGSG 120 (140)
T ss_dssp CCGGGE--EEEEESSCSSSSCEEEEEETTSCCTTCB
T ss_pred CCHHHE--EEEEECCCCCCCEEEEEEECCCCCCCCC
T ss_conf 986787--9998069974546999973357787642