HHsearch results for GI: 254780780 and protein with PDBid: 3nrd_A
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=99.92 E-value=9e-25 Score=174.36 Aligned_cols=120 Identities=22% Similarity=0.219 Sum_probs=106.9
Q ss_pred CCCEEEECCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCE
Q ss_conf 73178778909999417888982299994155421344027888989999997304455313526669998257566863
Q gi|254780780|r 24 NACRVYEDDILLAIMDIMPRNPGHVLIIPKSRIRDIFEAPPEILSQIAFLIKKIAIACKSAFQADGIQILQFNGHAAGQT 103 (155)
Q Consensus 24 p~~~v~E~d~~~afld~~P~~~GH~lViPk~H~~~l~dL~~~~~~~l~~~~~~v~~al~~~~~~~~~ni~~~~g~~~gq~ 103 (155)
++.+|.+...+.+.|..++..|||+||+||+|+++++||+++++.+++.++++++++++++++++++|+.+ .||+
T Consensus 14 d~~~i~~~~~~~~~l~~~~~~pg~lLV~pk~H~~~l~dL~~ee~~~l~~~~~~v~~al~~~~~~~~iN~~~-----~gq~ 88 (135)
T 3nrd_A 14 DGIPIGTLGLCQMRLMNDRRWPWLILVPQRADIKEVFELTPLDQAMLTFETNLVAAGLKKATGAEKINIGA-----LGNI 88 (135)
T ss_dssp HEEEEEECSSEEEEEESCTTSCEEEEEECCTTCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEE-----CCSS
T ss_pred CCEEEEECCCEEEEEECCCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH-----HCCC
T ss_conf 76899853774999833899998999957358698066999999999999999999999983976032988-----6897
Q ss_pred EEEEEEEEEECCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 10106999952379976534557--7666889899999999999999
Q gi|254780780|r 104 VPHLHFHVIPCKNGDNASHTNIH--PTQKIENFAKLEINAQKIRKEL 148 (155)
Q Consensus 104 V~HlH~HiiPR~~~d~~~~~~~~--~~~~~~~~~~l~~~a~~lr~~l 148 (155)
|||+|+||||||++|+.+....| +.....+.+++++.+++||++|
T Consensus 89 vpHlH~HiIPR~~~D~~~p~~vw~~~~~~~~~~~e~~~l~~kI~~~L 135 (135)
T 3nrd_A 89 VRQLHVHVIARREGDPNWPGPVWGFGKAEPWPEEEHRTFAARIMENL 135 (135)
T ss_dssp CCSCCEEEEEECTTSTTTTSCSTTCSCCCCCCHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 77579999567479988887612778887799999999999999609