HHSEARCH alignment of GI: 254780780 and SCOP domain: d2pofa1

Alignment

Probab=97.41  E-value=0.00015  Score=46.74  Aligned_cols=99  Identities=13%  Similarity=0.155  Sum_probs=73.7

Q ss_pred             CCCCHHHHHHCCC-CCCCEEEECCEEEEEECCCCCCCCEEEEEECCCCCHHHH--H----HHHHHHHHHHHHHHHHHHHH
Q ss_conf             8976545444688-873178778909999417888982299994155421344--0----27888989999997304455
Q gi|254780780|r   10 DNQNIFIKIIRNE-TNACRVYEDDILLAIMDIMPRNPGHVLIIPKSRIRDIFE--A----PPEILSQIAFLIKKIAIACK   82 (155)
Q Consensus        10 dd~CiFC~Ii~ge-~p~~~v~E~d~~~afld~~P~~~GH~lViPk~H~~~l~d--L----~~~~~~~l~~~~~~v~~al~   82 (155)
                      ++.|+.-+-..|. .|+..|-++..+++|.|  +.-|-|.|++|...++.+++  |    .+..+..-+..-..+++.+.
T Consensus         9 ~~~Cvp~~~~~~~p~pC~~Vd~~~gyvvlKD--~~G~~qyLliPt~rIsGIEsP~Ll~~~~pnyf~~AW~aR~~v~~~~g   86 (220)
T d2pofa1           9 LEECLPNQQQNQNPSPCAEVKPNAGYVVLKD--LNGPLQYLLMPTYRINGTESPLLTDPSTPNFFWLAWQARDFMSKKYG   86 (220)
T ss_dssp             HHTHHHHHHHHSCCTTSSEEETTTTEEEEEC--SSSSSCEEEEESSCCCSTTCGGGGSTTSCCHHHHHHHTTHHHHHHHT
T ss_pred             HHHCCCHHHCCCCCCCCEEEECCCCEEEEEC--CCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf             7633781432189999706706899799947--99982278851555467538413278986189999987278889748


Q ss_pred             HHCCCCCEEEEEECCCCCCCEEEEEEEEEE
Q ss_conf             313526669998257566863101069999
Q gi|254780780|r   83 SAFQADGIQILQFNGHAAGQTVPHLHFHVI  112 (155)
Q Consensus        83 ~~~~~~~~ni~~~~g~~~gq~V~HlH~Hii  112 (155)
                      +.+..+.+.+.+|.  ..|-+-.|||+||=
T Consensus        87 ~~lpd~~lsLaINS--~~gRSQdQLHIHI~  114 (220)
T d2pofa1          87 QPVPDRAVSLAINS--RTGRTQNHFHIHIS  114 (220)
T ss_dssp             SCCCGGGEEEEEBC--GGGCSCCSCCEEEE
T ss_pred             CCCCCHHEEEEECC--CCCCCCCCEEEEHH
T ss_conf             98883014788537--77767241365653

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: HIT-like
superfamily: HIT-like
family: CDH-like
domain: CDP-diacylglycerol pyrophosphatase CDH
species: Escherichia coli [TaxId: 562]