PSIBLAST alignment of GI: 254780780 and protein with PDB id: 1ems
gi|9955180|pdb|1EMS|A Chain A, Crystal Structure Of The C. Elegans Nitfhit Protein Length = 440
>gi|9955181|pdb|1EMS|B Chain B, Crystal Structure Of The C. Elegans Nitfhit Protein Length = 440
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 9/134 (6%)
Query: 17 KIIRNETNA-CRVYEDDILLAIMDIMPRNPGHVLIIPKSRIRDIFEAPPEILSQIAFLIK 75
K R A Y +++ P GHVL+ PK + + + + + + K
Sbjct: 300 KFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAK 359
Query: 76 KIAIACKSAFQADGIQILQFNGHAAGQTVPHLHFHVIPCKNGDNASHTNIH--------P 127
K+ + I +G AGQTVPH+H H++P + GD + P
Sbjct: 360 KVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGDFGDNEIYQKLASHDKEP 419
Query: 128 TQKIENFAKLEINA 141
+K + ++ A
Sbjct: 420 ERKPRSNEQMAEEA 433