PSIBLAST alignment of GI: 254780780 and protein with PDB id: 1ems

gi|9955180|pdb|1EMS|A Chain A, Crystal Structure Of The C. Elegans Nitfhit Protein Length = 440
>gi|9955181|pdb|1EMS|B Chain B, Crystal Structure Of The C. Elegans Nitfhit Protein Length = 440
 Score = 80.6 bits (197), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 9/134 (6%)

Query: 17  KIIRNETNA-CRVYEDDILLAIMDIMPRNPGHVLIIPKSRIRDIFEAPPEILSQIAFLIK 75
           K  R    A    Y        +++ P   GHVL+ PK  +  + +      + +  + K
Sbjct: 300 KFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAK 359

Query: 76  KIAIACKSAFQADGIQILQFNGHAAGQTVPHLHFHVIPCKNGDNASHTNIH--------P 127
           K+    +         I   +G  AGQTVPH+H H++P + GD   +            P
Sbjct: 360 KVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGDFGDNEIYQKLASHDKEP 419

Query: 128 TQKIENFAKLEINA 141
            +K  +  ++   A
Sbjct: 420 ERKPRSNEQMAEEA 433