HHsearch alignment for GI: 254780781 and conserved domain: COG1043

>COG1043 LpxA Acyl-[acyl carrier protein].
Probab=99.34  E-value=1e-11  Score=92.36  Aligned_cols=112  Identities=26%  Similarity=0.372  Sum_probs=66.0

Q ss_pred             CCCCCEECCCCCCCCCCEEEC-CEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECCEE-------C-------
Q ss_conf             025431035640066514620-1030235336772015661232204730686881232112100-------5-------
Q gi|254780781|r  111 IIPGTIVRHSAYIGPKAVLMP-SFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVL-------E-------  175 (285)
Q Consensus       111 v~P~a~vr~ga~Ig~g~vimp-~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvl-------e-------  175 (285)
T Consensus         6 IHPTAiIe~gA~ig~~V~IGpf~iIg~~V~ig~~t~l~shvvv~G~T~IG~~n~I~~~A~iG~~pQdlKykge~T~l~IG   85 (260)
T COG1043           6 IHPTAIIEPGAEIGEDVKIGPFCIIGPNVEIGDGTVLKSHVVVEGHTTIGRNNRIFPFASIGEDPQDLKYKGEPTRLIIG   85 (260)
T ss_pred             CCCCEEECCCCCCCCCCEECCEEEECCCCEECCCCEECCCEEEECCCEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf             57621527878828998888337988971988995883437996770777898791110428987545027984279988


Q ss_pred             ---------------CCCCCCEEECCCCEEECCCEEECCEEECCCCEEEEEEEECCCCEEEE
Q ss_conf             ---------------77656448725847821857846888458856630046527833687
Q gi|254780781|r  176 ---------------PIQTGPTIIEDNCFIGARSEIVEGCIIREGSVLGMGVFIGKSTKIID  222 (285)
Q Consensus       176 ---------------p~~a~pviIeD~v~IGa~s~I~~Gv~Ig~gavIgaG~vit~st~i~d  222 (285)
T Consensus        86 ~~n~IRE~vTi~~GT~~g~g~T~IGdnnl~May~HVAHDC~iGn~~ilaNnatLAGHV~igD  147 (260)
T COG1043          86 DNNTIREFVTIHRGTVQGGGVTRIGDNNLIMAYAHVAHDCVIGNNCILANNATLAGHVEVGD  147 (260)
T ss_pred             CCCEEEEEEEEECCCCCCCEEEEECCCCEEEEEEEEECCCEECCCEEEECCCEEECEEEECC
T ss_conf             99758668898615447861599778878987310313444567179966866854078877