HHsearch alignment for GI: 254780781 and conserved domain: COG1044

Probab=99.78  E-value=1.1e-18  Score=134.88  Aligned_cols=119  Identities=30%  Similarity=0.363  Sum_probs=101.7

Q ss_pred             HHCCCCCCCCCEECCCCCCCCCCEEEC-CEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECC-----------
Q ss_conf             424751025431035640066514620-10302353367720156612322047306868812321121-----------
Q gi|254780781|r  105 EKHNFRIIPGTIVRHSAYIGPKAVLMP-SFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGG-----------  172 (285)
Q Consensus       105 ~~~g~rv~P~a~vr~ga~Ig~g~vimp-~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGG-----------  172 (285)
T Consensus       114 i~~~~~ig~~vvI~~~v~IG~~~~I~~~avIg~~~~IG~~~~i~~~v~I~~~~~IG~~v~I~~GavIG~dgFg~a~~~~g  193 (338)
T COG1044         114 IGKNVSIGPNVVIGAGVVIGENVVIGAGAVIGENVKIGDGTVIHPNVTIYHNVVIGNNVIIHSGAVIGADGFGYAGTAIG  193 (338)
T ss_pred             CCCCCCCCCCEEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEECCCEECCCEEECCCCEECCCCCCCCCCCCC
T ss_conf             37787328874988897878985898897888896888885884787895275787822888998875685212246688


Q ss_pred             EECCCCCCCEEECCCCEEECCCEEECC----------------------EEECCCCEEEEEEEECCCCEEEEC
Q ss_conf             005776564487258478218578468----------------------884588566300465278336871
Q gi|254780781|r  173 VLEPIQTGPTIIEDNCFIGARSEIVEG----------------------CIIREGSVLGMGVFIGKSTKIIDR  223 (285)
Q Consensus       173 vlep~~a~pviIeD~v~IGa~s~I~~G----------------------v~Ig~gavIgaG~vit~st~i~d~  223 (285)
T Consensus       194 ~~Ki~q~g~V~Igd~VeIGanT~Idrga~~dTvIg~~~kIdN~vqIaHnv~IG~~~~I~~~vgIaGs~~IG~~  266 (338)
T COG1044         194 WVKIPQIGRVIIGDDVEIGANTTIDRGALDDTVIGEGVKIDNLVQIGHNVRIGEHCIIAGQVGIAGSVKIGKY  266 (338)
T ss_pred             CEECCEECEEEECCCEEECCCCEECCCCCCCCEECCCCEECCEEEECCCCEECCCCEEECCCEEECCCEECCE
T ss_conf             5671260659979824873552425655567265378487643078155278888377026316135357780