HHsearch alignment for GI: 254780781 and conserved domain: COG1044
>COG1044 LpxD UDP-3-O-[3-hydroxymyristoyl].
Probab=99.41 E-value=9.1e-13 Score=98.76 Aligned_cols=131 Identities=22% Similarity=0.366 Sum_probs=80.0
Q ss_pred ECCCCEEEECCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCCCCEECCCCCCCCCCEEEC-CEEECCCCCCCCCCCCCCC
Q ss_conf 426744762477642011017753236520234424751025431035640066514620-1030235336772015661
Q gi|254780781|r 72 QINPTKIISDGNGYSTWWDKIPAKFDDWKTKDFEKHNFRIIPGTIVRHSAYIGPKAVLMP-SFVNMGAYIGEGSMIDTWS 150 (285)
Q Consensus 72 ri~~~~~i~~g~~~~~~~DKvp~Kf~~~~~~~f~~~g~rv~P~a~vr~ga~Ig~g~vimp-~~VniGA~Ig~gt~I~~~a 150 (285)
T Consensus 70 ~~~~~~Lv~~-~P~~~-fA~~~~~f~----~~~~-~~~~I~~~A~i~p~A~i~~~~~ig~~vvI~~~v~IG~~~~I~~~a 142 (338)
T COG1044 70 PAKKNALVVK-DPYLA-FAKVAQLFY----RPFN-PAAGIHPTAVIDPTATIGKNVSIGPNVVIGAGVVIGENVVIGAGA 142 (338)
T ss_pred CCCCEEEEEC-CCHHH-HHHHHHHHC----CCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCEECCCC
T ss_conf 6687089948-80678-999998851----4776-535547655317767037787328874988897878985898897
Q ss_pred EECCEEEECCCCEEECCCEECCEECCCCCCCEEECCCCEEECCCEEEC-------------------CEEECCCCEEEEE
Q ss_conf 232204730686881232112100577656448725847821857846-------------------8884588566300
Q gi|254780781|r 151 TVGSCAQIGKNVHISGGVGIGGVLEPIQTGPTIIEDNCFIGARSEIVE-------------------GCIIREGSVLGMG 211 (285)
Q Consensus 151 ~IG~~a~IG~~vhI~~g~~IGGvlep~~a~pviIeD~v~IGa~s~I~~-------------------Gv~Ig~gavIgaG 211 (285)
T Consensus 143 vIg~~~~IG~~~~i~~~v~I~~--------~~~IG~~v~I~~GavIG~dgFg~a~~~~g~~Ki~q~g~V~Igd~VeIGan 214 (338)
T COG1044 143 VIGENVKIGDGTVIHPNVTIYH--------NVVIGNNVIIHSGAVIGADGFGYAGTAIGWVKIPQIGRVIIGDDVEIGAN 214 (338)
T ss_pred EECCCCEECCCCEECCCCEEEC--------CCEECCCEEECCCCEECCCCCCCCCCCCCCEECCEECEEEECCCEEECCC
T ss_conf 8888968888858847878952--------75787822888998875685212246688567126065997982487355
Q ss_pred EEECCC
Q ss_conf 465278
Q gi|254780781|r 212 VFIGKS 217 (285)
Q Consensus 212 ~vit~s 217 (285)
T Consensus 215 T~Idrg 220 (338)
T COG1044 215 TTIDRG 220 (338)
T ss_pred CEECCC
T ss_conf 242565