HHsearch alignment for GI: 254780781 and conserved domain: KOG4042

Probab=95.83  E-value=0.018  Score=35.69  Aligned_cols=114  Identities=25%  Similarity=0.332  Sum_probs=77.0

Q ss_pred             CCCCCCCCCEEE-CCEEECCCCCCCCCCCCCCCEECCE---EEECCCCEEECCCEECCEECCCC-----CCCEEECCCCE
Q ss_conf             564006651462-0103023533677201566123220---47306868812321121005776-----56448725847
Q gi|254780781|r  119 HSAYIGPKAVLM-PSFVNMGAYIGEGSMIDTWSTVGSC---AQIGKNVHISGGVGIGGVLEPIQ-----TGPTIIEDNCF  189 (285)
Q Consensus       119 ~ga~Ig~g~vim-p~~VniGA~Ig~gt~I~~~a~IG~~---a~IG~~vhI~~g~~IGGvlep~~-----a~pviIeD~v~  189 (285)
T Consensus         7 ~svkIap~AvVCvEs~irGdvti~~gcVvHP~a~~iA~aGPI~iGEnniiEEyA~i~n~~~~~~~~d~~~~pmiIGt~Nv   86 (190)
T KOG4042           7 TSVKIAPSAVVCVESDIRGDVTIKEGCVVHPFAVFIATAGPIYIGENNIIEEYAVIRNRLEPGAVWDSDGQPMIIGTWNV   86 (190)
T ss_pred             CEEEECCCEEEEEECCCCCCEEECCCCEECCEEEEECCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCE
T ss_conf             50464575189986021331486588385330799705698898667125667887700688875478997678723635


Q ss_pred             -----------EECCCEEECCEEECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEE
Q ss_conf             -----------82185784688845885663004652783368715881464454998789
Q gi|254780781|r  190 -----------IGARSEIVEGCIIREGSVLGMGVFIGKSTKIIDRNTGEITYGEVPSYSVV  239 (285)
Q Consensus       190 -----------IGa~s~I~~Gv~Ig~gavIgaG~vit~st~i~d~~~~~~~~g~vP~~~vv  239 (285)
T Consensus        87 FeVgc~s~A~kvGd~NVieskayvg~gv~vssgC~vGA~c~v~~~q-------~lpent~v  140 (190)
T KOG4042          87 FEVGCKSSAKKVGDRNVIESKAYVGDGVSVSSGCSVGAKCTVFSHQ-------NLPENTSV  140 (190)
T ss_pred             EEEECHHHHHHHCCCCEEEEEEEECCCCEECCCCEECCCEEEECCC-------CCCCCCEE
T ss_conf             8861233455516765476666864994872796541405771103-------46975168