HHsearch alignment for GI: 254780781 and conserved domain: PRK09677
>PRK09677 putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ; Provisional.
Probab=99.72 E-value=4.9e-17 Score=124.91 Aligned_cols=103 Identities=23% Similarity=0.498 Sum_probs=78.7
Q ss_pred CCCCCCCCCCCCCEEC--CEEEECCCCEEECCCEECC----EE---------------CCCCCCCEEECCCCEEECCCEE
Q ss_conf 5336772015661232--2047306868812321121----00---------------5776564487258478218578
Q gi|254780781|r 138 AYIGEGSMIDTWSTVG--SCAQIGKNVHISGGVGIGG----VL---------------EPIQTGPTIIEDNCFIGARSEI 196 (285)
Q Consensus 138 A~Ig~gt~I~~~a~IG--~~a~IG~~vhI~~g~~IGG----vl---------------ep~~a~pviIeD~v~IGa~s~I 196 (285)
T Consensus 66 l~IGdNv~Ig~~~~I~~~~~I~IG~nVlIa~~V~I~d~nH~~~~~~~~~~~~~~~~~~~~~~~~pv~Ig~~~wIg~~~~I 145 (192)
T PRK09677 66 LFFGDNVQVNDYVHIACIESITIGRDTLIASKVFITDHNHGSFKHSDDFSSPNLPPDMRTLESSAVVIGQRVWIGENVTI 145 (192)
T ss_pred EEECCCCEECCCCEEEECCCEEECCCCEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCEE
T ss_conf 89999848999858986776798998688798899678887655545434567682126677599898999899999999
Q ss_pred ECCEEECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEECCHHHH
Q ss_conf 4688845885663004652783368715881464454998789605644556776657764467279896120246
Q gi|254780781|r 197 VEGCIIREGSVLGMGVFIGKSTKIIDRNTGEITYGEVPSYSVVVPGSYPSINLKGDIAGPHLYCAVIIKKVDEKTR 272 (285)
Q Consensus 197 ~~Gv~Ig~gavIgaG~vit~st~i~d~~~~~~~~g~vP~~~vvvpg~~~~~~~~~~~~~~~~~cavi~~~~d~~t~ 272 (285)
T Consensus 146 l~Gv~Ig~~~vvgA~SvV~~---------------dvp~~~i~~-G~----------------PAk~Ik~~~~~~~ 189 (192)
T PRK09677 146 LPGVSIGNGCIVGANSVVTK---------------SIPENTVIA-GN----------------PAKIIKKYNHETK 189 (192)
T ss_pred ECCCEECCCCEECCCCEECC---------------CCCCCEEEE-EE----------------CCEEEEECCCCCC
T ss_conf 19969999989916999985---------------859991999-70----------------8388971275223