HHsearch alignment for GI: 254780781 and conserved domain: PRK11830
>PRK11830 dapD 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional.
Probab=100.00 E-value=0 Score=781.70 Aligned_cols=264 Identities=59% Similarity=1.057 Sum_probs=256.6
Q ss_pred HHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEHHHHHHHHHEEECCCCEEEECCCCCCCHHH
Q ss_conf 999975053168244-1789999999999730793799887599968860788623222064267447624776420110
Q gi|254780781|r 12 IDSFFEESNSKNESI-PQDVKDAVQSTLDLLDRGIIRIASRDDNGHWNTHQWIKKAILLSFQINPTKIISDGNGYSTWWD 90 (285)
Q Consensus 12 Ie~awe~r~~l~~~~-~~~~~~aI~~~I~~LD~G~iRVAEk~~nG~W~VNeWvKKAILL~Fri~~~~~i~~g~~~~~~~D 90 (285)
T Consensus 1 IE~AWE~r~~is~~s~~~evr~aI~e~I~lLD~G~iRVAEk~d-g~W~VNqWvKKAILLsFrl~~~~~~~~Gp-~~~~~D 78 (265)
T PRK11830 1 IEEAWENRAELTPATADAEVREAVEEVIDLLDSGELRVAEKID-GEWVVNQWVKKAILLSFRLNDNQVIEGGP-ESRFYD 78 (265)
T ss_pred CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC-CEEEEEHHHHHHHHHEEECCCCEEECCCC-CCCCEE
T ss_conf 9567531764897558788999999999873388679878529-98887399988665237525766862688-750044
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCCCEECCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEE
Q ss_conf 17753236520234424751025431035640066514620103023533677201566123220473068688123211
Q gi|254780781|r 91 KIPAKFDDWKTKDFEKHNFRIIPGTIVRHSAYIGPKAVLMPSFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGI 170 (285)
Q Consensus 91 Kvp~Kf~~~~~~~f~~~g~rv~P~a~vr~ga~Ig~g~vimp~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~I 170 (285)
T Consensus 79 KVplKf~~w~~~~f~~~gvRvVP~a~vR~Gayi~~~vVlMPs~VNiGAyv~~gtmiDtwatvGScAqiGknvhls~g~gi 158 (265)
T PRK11830 79 KVPSKFAGWDEARFKEAGVRVVPGAVVRRGAYIAKNVVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGI 158 (265)
T ss_pred CCCCCCCCCCHHHHHHCCEEECCCCEEEECEEECCCCEEEEEEEEEEEEECCCCEEECCCCEECHHEECCCEEECCCCEE
T ss_conf 04542379998999767908878853760305459958864177760398489548047624115323783368787414
Q ss_pred CCEECCCCCCCEEECCCCEEECCCEEECCEEECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEEECCCCCCCCCC
Q ss_conf 21005776564487258478218578468884588566300465278336871588146445499878960564455677
Q gi|254780781|r 171 GGVLEPIQTGPTIIEDNCFIGARSEIVEGCIIREGSVLGMGVFIGKSTKIIDRNTGEITYGEVPSYSVVVPGSYPSINLK 250 (285)
Q Consensus 171 GGvlep~~a~pviIeD~v~IGa~s~I~~Gv~Ig~gavIgaG~vit~st~i~d~~~~~~~~g~vP~~~vvvpg~~~~~~~~ 250 (285)
T Consensus 159 gGvleP~~a~p~iied~~fiGa~~~v~eGv~v~~~avl~~gv~l~~st~I~D~~~~ev~~g~vP~~svvv~Gs~p~~~-- 236 (265)
T PRK11830 159 GGVLEPLQANPVIIEDNCFIGARSEVVEGVIVEEGAVIGMGVFLGQSTKIYDRETGEVHYGRVPAGSVVVPGSLPSKD-- 236 (265)
T ss_pred EEEECCCCCCCEEEECCCEECCCCEEEEEEEEECCCEECCEEEECCCCEEEECCCCCEEECCCCCCCEEECCCCCCCC--
T ss_conf 265247667987983682873574796139994586972104760671678724782874347999889557403788--
Q ss_pred CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHH
Q ss_conf 66577644672798961202466888998751
Q gi|254780781|r 251 GDIAGPHLYCAVIIKKVDEKTRSKTSINTLLR 282 (285)
Q Consensus 251 ~~~~~~~~~cavi~~~~d~~t~~k~~ln~~lR 282 (285)
T Consensus 237 ---g~~~l~ca~ivk~~d~~t~~kt~l~~~lr 265 (265)
T PRK11830 237 ---GKYSLYCAVIVKKVDAKTRSKTSINELLR 265 (265)
T ss_pred ---CCCCCCCEEEEEECCCCHHHHHHHHHHHC
T ss_conf ---98176451999974551355666778649