HHsearch alignment for GI: 254780781 and conserved domain: TIGR01852
>TIGR01852 lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; InterPro: IPR010137 This entry describes LpxA, an enzyme for the biosynthesis of lipid A, a component of lipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species, but this protein represents the first step (from UDP-N-acetyl-D-glucosamine) and appears to be conserved in function. Proteins from this family contain many copies of the bacterial transferase hexapeptide repeat.; GO: 0008780 acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity, 0008610 lipid biosynthetic process.
Probab=98.60 E-value=1.6e-07 Score=66.66 Aligned_cols=55 Identities=18% Similarity=0.336 Sum_probs=26.3
Q ss_pred CCCCCCCEECCEEEECCCCEEECCCEECCEEC-----------CCCCCCEEECCCCEEECCCEEECC
Q ss_conf 20156612322047306868812321121005-----------776564487258478218578468
Q gi|254780781|r 144 SMIDTWSTVGSCAQIGKNVHISGGVGIGGVLE-----------PIQTGPTIIEDNCFIGARSEIVEG 199 (285)
Q Consensus 144 t~I~~~a~IG~~a~IG~~vhI~~g~~IGGvle-----------p~~a~pviIeD~v~IGa~s~I~~G 199 (285)
T Consensus 108 nllMAysHvAHDC~vGn~vv~aN~a~LAGHV~vgD~a~iGG~~avH-QFvRIG~~aMigG~s~v~~D 173 (257)
T TIGR01852 108 NLLMAYSHVAHDCVVGNHVVLANNATLAGHVEVGDYAIIGGLVAVH-QFVRIGRYAMIGGLSAVSKD 173 (257)
T ss_pred CEECCCCEEEECCEECCEEEEECCCEECEEEEECCEEEECCCCCEE-EEEEEHHHHHHHHHCCCCCC
T ss_conf 6572053561243688816981363122279988899977897211-01330002322120024678