HHsearch alignment for GI: 254780781 and conserved domain: TIGR01853
>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro: IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (2.3.1 from EC) catalyses an early step in lipid A biosynthesis : UDP-3-O-(3-hydroxytetradecanoyl)glucosamine + (R)-3-hydroxytetradecanoyl- [acyl carrier protein] = UDP-2,3-bis(3-hydroxytetradecanoyl)glucosamine + [acyl carrier protein] Members of this family also contain a hexapeptide repeat (IPR001451 from INTERPRO). This entry represents the non-repeating region of LPXD proteins.; GO: 0016747 transferase activity transferring groups other than amino-acyl groups, 0009245 lipid A biosynthetic process.
Probab=99.58 E-value=7.5e-15 Score=111.54 Aligned_cols=132 Identities=23% Similarity=0.277 Sum_probs=91.6
Q ss_pred CCCCEEEECCCCCCCHHHCCCCCCCCCCHHHH---HHCCCCCCCCCEECCCCCCCCCCEEEC-CEEECCCCCCCCCCCCC
Q ss_conf 26744762477642011017753236520234---424751025431035640066514620-10302353367720156
Q gi|254780781|r 73 INPTKIISDGNGYSTWWDKIPAKFDDWKTKDF---EKHNFRIIPGTIVRHSAYIGPKAVLMP-SFVNMGAYIGEGSMIDT 148 (285)
Q Consensus 73 i~~~~~i~~g~~~~~~~DKvp~Kf~~~~~~~f---~~~g~rv~P~a~vr~ga~Ig~g~vimp-~~VniGA~Ig~gt~I~~ 148 (285)
T Consensus 66 ~~~~~~L~v~~P~l~-fA~~~~~F~~~~~~~lvaR~~~g--i~p~a~~~~~a~~~~~v~I~pnvvIG~~v~IG~~~~I~p 142 (336)
T TIGR01853 66 PKKCAALVVKDPYLA-FAKVAELFDPPPKRLLVARMEAG--IHPTAVVEPSAKIGEGVTIGPNVVIGAGVEIGENVIIGP 142 (336)
T ss_pred CCCCCEEEECCCHHH-HHHHHHHHCCCCCCHHHHCCCCC--CCCCCCCCCCCCCCCCCEECCEEEECCCCEECCCCEECC
T ss_conf 232505781781799-99999860887650121101035--676873056531078436875417888868778636357
Q ss_pred CCEECCEEEECCCCEEECCCEECCEECCCCCCCEEECCCCEEECCCEEEC--------------------CEEECCCCEE
Q ss_conf 61232204730686881232112100577656448725847821857846--------------------8884588566
Q gi|254780781|r 149 WSTVGSCAQIGKNVHISGGVGIGGVLEPIQTGPTIIEDNCFIGARSEIVE--------------------GCIIREGSVL 208 (285)
Q Consensus 149 ~a~IG~~a~IG~~vhI~~g~~IGGvlep~~a~pviIeD~v~IGa~s~I~~--------------------Gv~Ig~gavI 208 (285)
T Consensus 143 g~~iG~~v~IG~~~~i~~~v~i~--------~~~~lG~nV~I~~GaVIG~DGFGya~~~~g~~~KI~q~G~ViI~D~VEI 214 (336)
T TIGR01853 143 GVVIGDDVVIGDGSVIYPNVVIY--------ERVQLGKNVIIHAGAVIGSDGFGYAHTANGGHVKIPQIGRVIIEDDVEI 214 (336)
T ss_pred CCEECCCCEECCCCEEECCCEEE--------ECCEECCEEEECCCCEECCCCCCEEECCCCCEEEEEEECEEEEECEEEE
T ss_conf 76876886879967780670897--------2415647158768878867873203578897154413024896023387
Q ss_pred EEEEEEC
Q ss_conf 3004652
Q gi|254780781|r 209 GMGVFIG 215 (285)
Q Consensus 209 gaG~vit 215 (285)
T Consensus 215 GANTtID 221 (336)
T TIGR01853 215 GANTTID 221 (336)
T ss_pred CCCCHHH
T ss_conf 4687021