HHsearch alignment for GI: 254780781 and conserved domain: TIGR03308
>TIGR03308 phn_thr-fam phosphonate metabolim protein, transferase hexapeptide repeat family. This family of proteins contains copies of the Bacterial transferase hexapeptide repeat family (pfam00132) and is only found in operons encoding the phosphonate C-P lyase system (GenProp0232). Many C-P lyase operons, however, lack a homolog of this protein.
Probab=98.33 E-value=4.3e-06 Score=57.92 Aligned_cols=133 Identities=18% Similarity=0.228 Sum_probs=64.7
Q ss_pred CCCCCEECCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECCEECCCCCCCEEECCCCEE
Q ss_conf 02543103564006651462010302353367720156612322047306868812321121005776564487258478
Q gi|254780781|r 111 IIPGTIVRHSAYIGPKAVLMPSFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVLEPIQTGPTIIEDNCFI 190 (285)
Q Consensus 111 v~P~a~vr~ga~Ig~g~vimp~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvlep~~a~pviIeD~v~I 190 (285)
T Consensus 5 l~~~p~Ihp~a~i~-~~~l-G~~----v~Ig~~~~i~n-s~IGDySyI~~~~~I~-n~~IGk--------fcsIa~~v~I 68 (204)
T TIGR03308 5 LSPEPTLHPTAELT-ESKL-GRY----TEIGERTRLRE-VALGDYSYVMRDCDII-YTTIGK--------FCSIAAMVRI 68 (204)
T ss_pred CCCCCEECCCCEEC-CCCC-CCC----EEECCCCEEEC-CEECCCCEECCCCEEE-CCEECC--------CCEECCCCEE
T ss_conf 47997689998683-2783-783----39999958833-7999985888997598-886999--------8488898798
Q ss_pred ECCCEE-------------------------------ECCEEECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEE
Q ss_conf 218578-------------------------------4688845885663004652783368715881464454998789
Q gi|254780781|r 191 GARSEI-------------------------------VEGCIIREGSVLGMGVFIGKSTKIIDRNTGEITYGEVPSYSVV 239 (285)
Q Consensus 191 Ga~s~I-------------------------------~~Gv~Ig~gavIgaG~vit~st~i~d~~~~~~~~g~vP~~~vv 239 (285)
T Consensus 69 ~~~nHp~~~~s~~~f~y~~~~~~~~~~~~~~~~~~~~~~~~~Ig~dvwiG~~~~i~~gv~IG~ga-------vigagsvV 141 (204)
T TIGR03308 69 NATNHPMERPTLHHFTYRAAMYFDDASDDADFFAWRRAKRVTIGHDVWIGHGAVILPGVTIGNGA-------VIAAGAVV 141 (204)
T ss_pred CCCCCCCCCCEECCEEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCEECCCCEECCCCEECCCC-------EECCCCEE
T ss_conf 98778766726777755375334666661223213347870989976887998991997999998-------99779989
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCEEEEEC-CHHHHH
Q ss_conf 6056445567766577644672798961-202466
Q gi|254780781|r 240 VPGSYPSINLKGDIAGPHLYCAVIIKKV-DEKTRS 273 (285)
Q Consensus 240 vpg~~~~~~~~~~~~~~~~~cavi~~~~-d~~t~~ 273 (285)
T Consensus 142 t-kdv~~~~i---v~G---~PAk~ir~RF~~~~i~ 169 (204)
T TIGR03308 142 T-KDVAPYTI---VAG---VPAKLIRRRFPPEIAA 169 (204)
T ss_pred C-CCCCCCEE---EEE---CCCEEEECCCCHHHHH
T ss_conf 9-51799849---984---1885663109999999