HHsearch alignment for GI: 254780781 and conserved domain: cd04650
>cd04650 LbH_FBP Ferripyochelin Binding Protein (FBP): FBP is an outer membrane protein which plays a role in iron acquisition. It binds iron when it is complexed with pyochelin. It adopts the left-handed parallel beta-helix (LbH) structure, and contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Acyltransferase activity has not been observed in this group.
Probab=99.77 E-value=2.5e-18 Score=132.84 Aligned_cols=129 Identities=22% Similarity=0.381 Sum_probs=96.9
Q ss_pred CCCCCCEECCCCCCCCCCEEEC-CEEEC---CCCCCCCCCCCCCCEE----CCEEEECCCCEEECCCEECCEECCCCCCC
Q ss_conf 1025431035640066514620-10302---3533677201566123----22047306868812321121005776564
Q gi|254780781|r 110 RIIPGTIVRHSAYIGPKAVLMP-SFVNM---GAYIGEGSMIDTWSTV----GSCAQIGKNVHISGGVGIGGVLEPIQTGP 181 (285)
Q Consensus 110 rv~P~a~vr~ga~Ig~g~vimp-~~Vni---GA~Ig~gt~I~~~a~I----G~~a~IG~~vhI~~g~~IGGvlep~~a~p 181 (285)
T Consensus 8 ~I~p~a~i~G~v~IG~~~~I~~~~~Ir~d~~~i~IG~~~~I~~n~~I~~~~~~~~~ig~~v~ig~~~~i~g--------- 78 (154)
T cd04650 8 YVHPTSYVIGDVVIGELTSVWHYAVIRGDNDSIYIGKYSNVQENVSIHTDHGYPTEIGDYVTIGHNAVVHG--------- 78 (154)
T ss_pred EECCCCEEECEEEECCCCEECCCCEEECCCCCEEECCCEEECCCCEEEECCCCCCEECCCCEECCCEEEEC---------
T ss_conf 99999999760599999999875389558876599993398999889846999868799768899528823---------
Q ss_pred EEECCCCEEECCCEEECCEEECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 48725847821857846888458856630046527833687158814644549987896056445567766577644672
Q gi|254780781|r 182 TIIEDNCFIGARSEIVEGCIIREGSVLGMGVFIGKSTKIIDRNTGEITYGEVPSYSVVVPGSYPSINLKGDIAGPHLYCA 261 (285)
Q Consensus 182 viIeD~v~IGa~s~I~~Gv~Ig~gavIgaG~vit~st~i~d~~~~~~~~g~vP~~~vvvpg~~~~~~~~~~~~~~~~~ca 261 (285)
T Consensus 79 ~~Ig~~v~IG~~a~I~~Gv~IG~~svIgaGsVV~~~~-------------~Vp~~~lv~-G~----------------PA 128 (154)
T cd04650 79 AKVGNYVIVGMGAILLNGAKIGDHVIIGAGAVVTPGK-------------EIPDYSLVL-GV----------------PA 128 (154)
T ss_pred CEECCEEEECCCEEEECCCEECCCCEECCCCEECCCC-------------EECCCCEEE-EC----------------CE
T ss_conf 0220135988722996287989997998898887997-------------919984999-61----------------81
Q ss_pred EEEEECCHHHHHHHHH
Q ss_conf 7989612024668889
Q gi|254780781|r 262 VIIKKVDEKTRSKTSI 277 (285)
Q Consensus 262 vi~~~~d~~t~~k~~l 277 (285)
T Consensus 129 r~ir~l~~~~~~~~~~ 144 (154)
T cd04650 129 KVVRKLTEEEIEWIKK 144 (154)
T ss_pred EEEEECCHHHHHHHHH
T ss_conf 8977299999999999