HHsearch alignment for GI: 254780781 and conserved domain: cd04651
>cd04651 LbH_G1P_AT_C Glucose-1-phosphate adenylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Glucose-1-phosphate adenylyltransferase is also known as ADP-glucose synthase or ADP-glucose pyrophosphorylase. It catalyzes the first committed and rate-limiting step in starch biosynthesis in plants and glycogen biosynthesis in bacteria. It is the enzymatic site for regulation of storage polysaccharide accumulation in plants and bacteria. The enzyme is a homotetramer, with each subunit containing an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain with at 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). The LbH domain is involved in cooperative allosteric regulation and oligomerization.
Probab=98.55 E-value=2.6e-07 Score=65.36 Aligned_cols=97 Identities=27% Similarity=0.369 Sum_probs=63.2
Q ss_pred CCCCCCEEECCEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECCEECCCCCCCEEECCCCEEECCCEEECCEE
Q ss_conf 00665146201030235336772015661232204730686881232112100577656448725847821857846888
Q gi|254780781|r 122 YIGPKAVLMPSFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVLEPIQTGPTIIEDNCFIGARSEIVEGCI 201 (285)
Q Consensus 122 ~Ig~g~vimp~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvlep~~a~pviIeD~v~IGa~s~I~~Gv~ 201 (285)
T Consensus 3 ~~~~~~~v~------~S~Ig~Gc~I~-~~~V~~-SVIg~~~~Ig~~a~I~---------~svi~~~~~Ig~~~~l~-~~I 64 (104)
T cd04651 3 YIGRRGEVK------NSLVSEGCIIS-GGTVEN-SVLFRGVRVGSGSVVE---------DSVIMPNVGIGRNAVIR-RAI 64 (104)
T ss_pred EECCCCEEE------ECEECCCCEEE-CCEEEC-CEECCCCEECCCCEEE---------CCEEECCCEECCCCEEE-EEE
T ss_conf 888994898------49988997995-999980-8972997999998996---------00996556899999998-619
Q ss_pred ECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEEEC
Q ss_conf 4588566300465278336871588146445499878960
Q gi|254780781|r 202 IREGSVLGMGVFIGKSTKIIDRNTGEITYGEVPSYSVVVP 241 (285)
Q Consensus 202 Ig~gavIgaG~vit~st~i~d~~~~~~~~g~vP~~~vvvp 241 (285)
T Consensus 65 i~~~~~I~~g~~Ig~-----~~~~d~~~~~v~~~gi~Vi~ 99 (104)
T cd04651 65 IDKNVVIPDGVVIGG-----DPEEDRARFYVTEDGIVVVG 99 (104)
T ss_pred ECCCCEECCCCEECC-----CCHHHHHCCEECCCCEEEEC
T ss_conf 999999998999998-----93143217869279789979