HHsearch alignment for GI: 254780781 and conserved domain: cd04745
>cd04745 LbH_paaY_like paaY-like: This group is composed by uncharacterized proteins with similarity to the protein product of the E. coli paaY gene, which is part of the paa gene cluster responsible for phenylacetic acid degradation. Proteins in this group are expected to adopt the left-handed parallel beta-helix (LbH) structure. They contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Similarity to gamma carbonic anhydrase and Ferripyochelin Binding Protein (FBP) may suggest metal binding capacity.
Probab=99.77 E-value=2.5e-18 Score=132.86 Aligned_cols=127 Identities=23% Similarity=0.425 Sum_probs=97.8
Q ss_pred CCCCCCCCEECCCCCCCCCCEEEC-CEEEC--C-CCCCCCCCCCCCCEE----CCEEEECCCCEEECCCEECCEECCCCC
Q ss_conf 751025431035640066514620-10302--3-533677201566123----220473068688123211210057765
Q gi|254780781|r 108 NFRIIPGTIVRHSAYIGPKAVLMP-SFVNM--G-AYIGEGSMIDTWSTV----GSCAQIGKNVHISGGVGIGGVLEPIQT 179 (285)
Q Consensus 108 g~rv~P~a~vr~ga~Ig~g~vimp-~~Vni--G-A~Ig~gt~I~~~a~I----G~~a~IG~~vhI~~g~~IGGvlep~~a 179 (285)
T Consensus 6 ~a~I~p~A~I~G~V~IG~~~~I~~~~~Ir~d~g~i~IG~~~~I~~n~~Ih~~~~~~~~Ig~~~~ig~~~~~~g------- 78 (155)
T cd04745 6 SSFVHPTAVLIGDVIIGKNCYIGPHASLRGDFGRIVIRDGANVQDNCVIHGFPGQDTVLEENGHIGHGAILHG------- 78 (155)
T ss_pred CEEECCCCEEEEEEEECCCCEECCCEEEECCCCCEEECCCCEECCCCEECCCCCCCCEECCCCEECCCCEECC-------
T ss_conf 8599999999844799899799846079638777899999797878440135999869899978998748715-------
Q ss_pred CCEEECCCCEEECCCEEECCEEECCCCEEEEEEEECCCCEEEECCCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 64487258478218578468884588566300465278336871588146445499878960564455677665776446
Q gi|254780781|r 180 GPTIIEDNCFIGARSEIVEGCIIREGSVLGMGVFIGKSTKIIDRNTGEITYGEVPSYSVVVPGSYPSINLKGDIAGPHLY 259 (285)
Q Consensus 180 ~pviIeD~v~IGa~s~I~~Gv~Ig~gavIgaG~vit~st~i~d~~~~~~~~g~vP~~~vvvpg~~~~~~~~~~~~~~~~~ 259 (285)
T Consensus 79 --~~Ig~~~~IG~~a~I~~G~~IG~~siIgagSvV~~~~~-------------VP~~~l~~-Gn---------------- 126 (155)
T cd04745 79 --CTIGRNALVGMNAVVMDGAVIGEESIVGAMAFVKAGTV-------------IPPRSLIA-GS---------------- 126 (155)
T ss_pred --CEEEEEEEECCCCEEECCCEECCCCEEEECCEECCCCC-------------CCCCEEEE-EE----------------
T ss_conf --17743249768759959779899979941878769968-------------37998999-72----------------
Q ss_pred CCEEEEECCHHHHH
Q ss_conf 72798961202466
Q gi|254780781|r 260 CAVIIKKVDEKTRS 273 (285)
Q Consensus 260 cavi~~~~d~~t~~ 273 (285)
T Consensus 127 PAk~ir~l~~~e~~ 140 (155)
T cd04745 127 PAKVIRELSDEEVA 140 (155)
T ss_pred CCEEEECCCHHHHH
T ss_conf 86797439999999