HHsearch alignment for GI: 254780781 and conserved domain: cd05636
>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains. Members in this family are predicted to be glucose-1-phosphate thymidylyltransferases, which are involved in the dTDP-L-rhamnose biosynthetic pathway. Glucose-1-phosphate thymidylyltransferase catalyzes the synthesis of deoxy-thymidine di-phosphate (dTDP)-L-rhamnose, an important component of the cell wall of many microorganisms. The C-terminal LbH domain contains multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.57 E-value=9.8e-15 Score=110.80 Aligned_cols=74 Identities=23% Similarity=0.327 Sum_probs=52.9
Q ss_pred CCCCCCCCCCCEECCEEEECCCCEEECCCEECCEE-C---------------CCCCCCEEECCCCEEECCCEEECCEEEC
Q ss_conf 36772015661232204730686881232112100-5---------------7765644872584782185784688845
Q gi|254780781|r 140 IGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGGVL-E---------------PIQTGPTIIEDNCFIGARSEIVEGCIIR 203 (285)
Q Consensus 140 Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGGvl-e---------------p~~a~pviIeD~v~IGa~s~I~~Gv~Ig 203 (285)
T Consensus 73 i~~~~~i~~~~~ig~-siIG~~v~IGagtvi~n~~~~~~~~~v~~~~~~~~~~~~~~G~vIGd~~~IG~ns~I~~G~~IG 151 (163)
T cd05636 73 IMDGTKVPHLNYVGD-SVLGENVNLGAGTITANLRFDDKPVKVRLKGERVDTGRRKLGAIIGDGVKTGINVSLNPGVKIG 151 (163)
T ss_pred CCCCCCCCCCCEECC-CEECCCCEECCCEEEECCCCCCCCEEEEECCEEECCCCEECCCEECCCCEECCCCEECCCEEEC
T ss_conf 147843277568777-2992996988983781776788634784077062367704077977997999898986995999
Q ss_pred CCCEEEEEEEE
Q ss_conf 88566300465
Q gi|254780781|r 204 EGSVLGMGVFI 214 (285)
Q Consensus 204 ~gavIgaG~vi 214 (285)
T Consensus 152 ~~a~IgaGsvV 162 (163)
T cd05636 152 PGSWVYPGCVV 162 (163)
T ss_pred CCCEECCCCEE
T ss_conf 99899999796