HHsearch alignment for GI: 254780781 and conserved domain: cd05636
>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains. Members in this family are predicted to be glucose-1-phosphate thymidylyltransferases, which are involved in the dTDP-L-rhamnose biosynthetic pathway. Glucose-1-phosphate thymidylyltransferase catalyzes the synthesis of deoxy-thymidine di-phosphate (dTDP)-L-rhamnose, an important component of the cell wall of many microorganisms. The C-terminal LbH domain contains multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.52 E-value=7e-14 Score=105.56 Aligned_cols=113 Identities=19% Similarity=0.380 Sum_probs=78.8
Q ss_pred CCCCCCEECCCCCCCCCCEEEC-CEEECCCCCCCCCCCCCCCEECCEEEECCCCEEECCCEECC-EECC-------CCCC
Q ss_conf 1025431035640066514620-10302353367720156612322047306868812321121-0057-------7656
Q gi|254780781|r 110 RIIPGTIVRHSAYIGPKAVLMP-SFVNMGAYIGEGSMIDTWSTVGSCAQIGKNVHISGGVGIGG-VLEP-------IQTG 180 (285)
Q Consensus 110 rv~P~a~vr~ga~Ig~g~vimp-~~VniGA~Ig~gt~I~~~a~IG~~a~IG~~vhI~~g~~IGG-vlep-------~~a~ 180 (285)
T Consensus 7 ~I~p~a~I~~~v~Ig~~a~I~~~a~I~~~v~IG~~~~Ig~~~~I~~~~~IG~~~~IG~~~~I~~~vi~~~~~i~~~~~ig 86 (163)
T cd05636 7 TVEEGVTIKGPVWIGEGAIVRSGAYIEGPVIIGKGCEIGPNAYIRGYTVLGDGCVVGNSVEVKNSIIMDGTKVPHLNYVG 86 (163)
T ss_pred EECCCCEECCCEEECCCCEECCCCEEECCEEECCCCEEEECCCCCCCEEECCEEEECCCEEECCCCCCCCCCCCCCCEEC
T ss_conf 99999999898199999999999999797599899899364122698586130120551242124014784327756877
Q ss_pred CEEECCCCEEECCCEEEC------------------------CEEECCCCEEEEEEEECCCCEEEE
Q ss_conf 448725847821857846------------------------888458856630046527833687
Q gi|254780781|r 181 PTIIEDNCFIGARSEIVE------------------------GCIIREGSVLGMGVFIGKSTKIID 222 (285)
Q Consensus 181 pviIeD~v~IGa~s~I~~------------------------Gv~Ig~gavIgaG~vit~st~i~d 222 (285)
T Consensus 87 ~siIG~~v~IGagtvi~n~~~~~~~~~v~~~~~~~~~~~~~~G~vIGd~~~IG~ns~I~~G~~IG~ 152 (163)
T cd05636 87 DSVLGENVNLGAGTITANLRFDDKPVKVRLKGERVDTGRRKLGAIIGDGVKTGINVSLNPGVKIGP 152 (163)
T ss_pred CCEECCCCEECCCEEEECCCCCCCCEEEEECCEEECCCCEECCCEECCCCEECCCCEECCCEEECC
T ss_conf 729929969889837817767886347840770623677040779779979998989869959999