HHsearch alignment for GI: 254780782 and conserved domain: COG0624
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=453.25 Aligned_cols=376 Identities=33% Similarity=0.472 Sum_probs=311.6
Q ss_pred CHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEECCCC--CEEEEECCCCCCCC
Q ss_conf 878999999996499978-996899999999999779848999705888762489999987999--88999733681578
Q gi|254780782|r 2 TPDCLEHLIQLIKCPSVT-PQDGGAFFILVNTLKLLGFSIEEKDFQTKNTSIVKNLYARFGTEA--PHLMFAGHIDVVPP 78 (389)
Q Consensus 2 ~~e~v~~l~~lv~ips~s-~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~ill~~H~Dtvp~ 78 (389)
T Consensus 12 ~~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~--~~~n~~~~~~~~~~~~~l~l~~H~DvVP~ 89 (409)
T COG0624 12 LDDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGP--GRPNLVARLGGGDGGPTLLLGGHLDVVPA 89 (409)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC--CCCEEEEEECCCCCCCEEEEEEECCCCCC
T ss_conf 7889999988747578787652689999999999769974897326787--75308999248888976999842361179
Q ss_pred CCHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCC-CCCCCCEEEEEEEECCCEECCCCCCCCCCCC-CC
Q ss_conf 887772566642245213323654433320124544100000001-1357834999752022011044211111000-13
Q gi|254780782|r 79 GDFNHWTYPPFSATIAEGKIYGRGIVDMKGSIACFIAAVARFIPK-YKNFGSISLLITGDEEGPAINGTKKMLSWIE-KK 156 (389)
Q Consensus 79 ~~~~~W~~~Pf~~~~~~g~l~GrG~~D~Kg~ia~~l~a~~~l~~~-~~~~~~i~~~~~~dEE~~~~~G~~~l~~~~~-~~ 156 (389)
T Consensus 90 g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~-~~~~~~~~~~~~~ 168 (409)
T COG0624 90 GGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGA-GGKAYLEEGEEAL 168 (409)
T ss_pred CCCCCCCCCCCEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCH-HHHHHHHHCCCCC
T ss_conf 996667469943899899999985154740799999999999973789883089999778645844-6899997244102
Q ss_pred CCCCCEEEECCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCHH--HHCCCC----HHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 321203541456654343100123222357999999641231000--000120----13455443201122334456644
Q gi|254780782|r 157 GEKWDACIVGEPTCNHIIGDTIKIGRRGSLSGEITIHGKQGHVAY--PHLTEN----PIRGLIPLLHQLTNIGFDTGNTT 230 (389)
Q Consensus 157 ~~~~d~~i~~ep~~~~~~~~~i~~g~rG~~~~~i~v~G~~~Hs~~--p~~g~n----Ai~~~~~~i~~l~~~~~~~~~~~ 230 (389)
T Consensus 169 ~~~~d~~iv~E~~~~~~~~~~~~~~~kG~~~~~v~v~G~~~Has~~~p~~~~n~~~~a~~~~~~~~~~~~~~~----~~~ 244 (409)
T COG0624 169 GIRPDYEIVGEPTLESEGGDIIVVGHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLA----GEG 244 (409)
T ss_pred CCCCCEEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH----HHC
T ss_conf 5686689984776645688657998742489999999636777888843445569999999999999988764----310
Q ss_pred CC-CEEEEEEEEEECCCC-------CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf 21-014667655420466-------6554321166513434206779999999999876532420343112322266311
Q gi|254780782|r 231 FS-PTNMEITTIDVGNPS-------KNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSHTVHFSSPVSP 302 (389)
Q Consensus 231 ~~-~~~~~i~~i~~g~~~-------~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~i~~~~~~~p 302 (389)
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~nvIP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~-~~~~~~~~~~~~~~~~ 323 (409)
T COG0624 245 FDGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAP-KEGVEYEIEPGLGEPP 323 (409)
T ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCCCEEEECCCCCCCC
T ss_conf 687761022303057764445666670878878999888559753357899999999986321-2371599812555677
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHC-CCEEEEEECC-CCCCCCCCEEEHHHHHHHHHHHHHHH
Q ss_conf 257867899999999999982899579741454358898605-9899990047-87368784047999999999999999
Q gi|254780782|r 303 VFLTHDRKLTSLLSKSIYNTTGNIPLLSTSGGTSDARFIKDY-CPVIEFGLVG-RTMHALNENASLQDLEDLTCIYENFL 380 (389)
Q Consensus 303 ~~~~~~~~l~~~l~~a~~~~~g~~~~~~~~gg~~d~~~~~~~-iP~v~fGp~~-~~~H~pdE~i~i~~l~~~~~~~~~~i 380 (389)
T Consensus 324 ~~~~~~~~~v~~l~~~~~~~~g~~~~~~~~G~~~da~~~~~~~~~~~~fgp~~~~~~H~~~E~v~i~~l~~~~~~~~~~i 403 (409)
T COG0624 324 LPVPGDSPLVAALAEAAEELLGLPPEVSTGGGTHDARFFARLGIPAVIFGPGDIGLAHQPNEYVELEDLVKGAKVLARLL 403 (409)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 77898679999999999997399834425574778999985398579983798887868052812999999999999999
Q ss_pred HHHCC
Q ss_conf 98724
Q gi|254780782|r 381 QNWFI 385 (389)
Q Consensus 381 ~~~~~ 385 (389)
T Consensus 404 ~~l~~ 408 (409)
T COG0624 404 YELAE 408 (409)
T ss_pred HHHHH
T ss_conf 99844