HHsearch alignment for GI: 254780782 and conserved domain: COG0624

>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism].
Probab=100.00  E-value=0  Score=453.25  Aligned_cols=376  Identities=33%  Similarity=0.472  Sum_probs=311.6

Q ss_pred             CHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEECCCC--CEEEEECCCCCCCC
Q ss_conf             878999999996499978-996899999999999779848999705888762489999987999--88999733681578
Q gi|254780782|r    2 TPDCLEHLIQLIKCPSVT-PQDGGAFFILVNTLKLLGFSIEEKDFQTKNTSIVKNLYARFGTEA--PHLMFAGHIDVVPP   78 (389)
Q Consensus         2 ~~e~v~~l~~lv~ips~s-~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~ill~~H~Dtvp~   78 (389)
T Consensus        12 ~~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~--~~~n~~~~~~~~~~~~~l~l~~H~DvVP~   89 (409)
T COG0624          12 LDDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGP--GRPNLVARLGGGDGGPTLLLGGHLDVVPA   89 (409)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC--CCCEEEEEECCCCCCCEEEEEEECCCCCC
T ss_conf             7889999988747578787652689999999999769974897326787--75308999248888976999842361179


Q ss_pred             CCHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCC-CCCCCCEEEEEEEECCCEECCCCCCCCCCCC-CC
Q ss_conf             887772566642245213323654433320124544100000001-1357834999752022011044211111000-13
Q gi|254780782|r   79 GDFNHWTYPPFSATIAEGKIYGRGIVDMKGSIACFIAAVARFIPK-YKNFGSISLLITGDEEGPAINGTKKMLSWIE-KK  156 (389)
Q Consensus        79 ~~~~~W~~~Pf~~~~~~g~l~GrG~~D~Kg~ia~~l~a~~~l~~~-~~~~~~i~~~~~~dEE~~~~~G~~~l~~~~~-~~  156 (389)
T Consensus        90 g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~-~~~~~~~~~~~~~  168 (409)
T COG0624          90 GGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGA-GGKAYLEEGEEAL  168 (409)
T ss_pred             CCCCCCCCCCCEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCH-HHHHHHHHCCCCC
T ss_conf             996667469943899899999985154740799999999999973789883089999778645844-6899997244102


Q ss_pred             CCCCCEEEECCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCHH--HHCCCC----HHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             321203541456654343100123222357999999641231000--000120----13455443201122334456644
Q gi|254780782|r  157 GEKWDACIVGEPTCNHIIGDTIKIGRRGSLSGEITIHGKQGHVAY--PHLTEN----PIRGLIPLLHQLTNIGFDTGNTT  230 (389)
Q Consensus       157 ~~~~d~~i~~ep~~~~~~~~~i~~g~rG~~~~~i~v~G~~~Hs~~--p~~g~n----Ai~~~~~~i~~l~~~~~~~~~~~  230 (389)
T Consensus       169 ~~~~d~~iv~E~~~~~~~~~~~~~~~kG~~~~~v~v~G~~~Has~~~p~~~~n~~~~a~~~~~~~~~~~~~~~----~~~  244 (409)
T COG0624         169 GIRPDYEIVGEPTLESEGGDIIVVGHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLA----GEG  244 (409)
T ss_pred             CCCCCEEEECCCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH----HHC
T ss_conf             5686689984776645688657998742489999999636777888843445569999999999999988764----310


Q ss_pred             CC-CEEEEEEEEEECCCC-------CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf             21-014667655420466-------6554321166513434206779999999999876532420343112322266311
Q gi|254780782|r  231 FS-PTNMEITTIDVGNPS-------KNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSHTVHFSSPVSP  302 (389)
Q Consensus       231 ~~-~~~~~i~~i~~g~~~-------~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~i~~~~~~~p  302 (389)
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~g~~~nvIP~~~~~~~d~R~~p~~~~~~~~~~v~~~i~~~~~-~~~~~~~~~~~~~~~~  323 (409)
T COG0624         245 FDGPLGLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEAELRAIAP-KEGVEYEIEPGLGEPP  323 (409)
T ss_pred             CCCCCCCCCCEEECCCCCCCCCCCCCEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCCCEEEECCCCCCCC
T ss_conf             687761022303057764445666670878878999888559753357899999999986321-2371599812555677


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHC-CCEEEEEECC-CCCCCCCCEEEHHHHHHHHHHHHHHH
Q ss_conf             257867899999999999982899579741454358898605-9899990047-87368784047999999999999999
Q gi|254780782|r  303 VFLTHDRKLTSLLSKSIYNTTGNIPLLSTSGGTSDARFIKDY-CPVIEFGLVG-RTMHALNENASLQDLEDLTCIYENFL  380 (389)
Q Consensus       303 ~~~~~~~~l~~~l~~a~~~~~g~~~~~~~~gg~~d~~~~~~~-iP~v~fGp~~-~~~H~pdE~i~i~~l~~~~~~~~~~i  380 (389)
T Consensus       324 ~~~~~~~~~v~~l~~~~~~~~g~~~~~~~~G~~~da~~~~~~~~~~~~fgp~~~~~~H~~~E~v~i~~l~~~~~~~~~~i  403 (409)
T COG0624         324 LPVPGDSPLVAALAEAAEELLGLPPEVSTGGGTHDARFFARLGIPAVIFGPGDIGLAHQPNEYVELEDLVKGAKVLARLL  403 (409)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             77898679999999999997399834425574778999985398579983798887868052812999999999999999


Q ss_pred             HHHCC
Q ss_conf             98724
Q gi|254780782|r  381 QNWFI  385 (389)
Q Consensus       381 ~~~~~  385 (389)
T Consensus       404 ~~l~~  408 (409)
T COG0624         404 YELAE  408 (409)
T ss_pred             HHHHH
T ss_conf             99844