HHsearch alignment for GI: 254780782 and conserved domain: PRK13009
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed.
Probab=100.00 E-value=0 Score=582.81 Aligned_cols=372 Identities=52% Similarity=0.834 Sum_probs=339.9
Q ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHH
Q ss_conf 78999999996499978996899999999999779848999705888762489999987999889997336815788877
Q gi|254780782|r 3 PDCLEHLIQLIKCPSVTPQDGGAFFILVNTLKLLGFSIEEKDFQTKNTSIVKNLYARFGTEAPHLMFAGHIDVVPPGDFN 82 (389)
Q Consensus 3 ~e~v~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ill~~H~Dtvp~~~~~ 82 (389)
T Consensus 2 ~d~i~ll~~LV~ipS~s~~e~~~~~~l~~~l~~~G~~ve~~~~~-----~~~Nl~a~~g~~~~~l~l~gH~DvVP~gd~~ 76 (375)
T PRK13009 2 SDVLELAQDLIRRPSVTPDDAGCQDLLAERLKALGFTCERMDFG-----DVKNLWARRGGEGPHLCFAGHTDVVPPGDLE 76 (375)
T ss_pred CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECC-----CCCEEEEEECCCCCEEEEECCCCCCCCCCCC
T ss_conf 66999999982999969886899999999999779906996049-----9647999968999879997873754899711
Q ss_pred HCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC-CCCCCEEEEEEEECCCEECCCCCCCCCCCCCCCCCCC
Q ss_conf 725666422452133236544333201245441000000011-3578349997520220110442111110001332120
Q gi|254780782|r 83 HWTYPPFSATIAEGKIYGRGIVDMKGSIACFIAAVARFIPKY-KNFGSISLLITGDEEGPAINGTKKMLSWIEKKGEKWD 161 (389)
Q Consensus 83 ~W~~~Pf~~~~~~g~l~GrG~~D~Kg~ia~~l~a~~~l~~~~-~~~~~i~~~~~~dEE~~~~~G~~~l~~~~~~~~~~~d 161 (389)
T Consensus 77 ~W~~dPf~~~i~dg~lyGRGa~DmKg~laa~l~A~~~l~~~~~~~~~~l~~~~~~dEE~~~~~G~~~~~~~l~~~~~~~d 156 (375)
T PRK13009 77 QWTSPPFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAKHPDHKGSISFLITSDEEGPAINGTVKVLEWLKARGEKID 156 (375)
T ss_pred CCCCCCCCCEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf 24479986089899998036443545589999999999985667898669999604556655675899888996299878
Q ss_pred EEEECCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 35414566543431001232223579999996412310000001201345544320112233445664421014667655
Q gi|254780782|r 162 ACIVGEPTCNHIIGDTIKIGRRGSLSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIGFDTGNTTFSPTNMEITTI 241 (389)
Q Consensus 162 ~~i~~ep~~~~~~~~~i~~g~rG~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~i~~i 241 (389)
T Consensus 157 ~~iv~EPt~~~~~G~~i~~g~kG~~~~~l~v~G~~aH~s~P~~g~NAi~~~~~~l~~L~~~~~d~~~~~~~~tt~~v~~i 236 (375)
T PRK13009 157 YCIVGEPTSTERLGDVIKNGRRGSLSGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNI 236 (375)
T ss_pred EEEECCCCCCCCCCCEEEECCEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
T ss_conf 89984787654111004642347999999999515544685456699999999999987035544776679874213258
Q ss_pred EECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 42046665543211665134342067799999999998765324203431123222663112578678999999999999
Q gi|254780782|r 242 DVGNPSKNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSHTVHFSSPVSPVFLTHDRKLTSLLSKSIYN 321 (389)
Q Consensus 242 ~~g~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~l~~~l~~a~~~ 321 (389)
T Consensus 237 ~gG~~~~nviP~~~~~~~d~R~~p~~~~e~v~~~i~~~~~~-----~~~~~~i~~~~~~~p~~~-~~~~~v~~l~~a~~~ 310 (375)
T PRK13009 237 DAGTGATNVIPGELEAQFNFRFSTEHTAESLKARVEAILDK-----HGLDYTLEWSLSGEPFLT-PPGKLVDAVSAAIEA 310 (375)
T ss_pred ECCCCCCCEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHH-----CCCCCEEEECCCCCCCCC-CCCHHHHHHHHHHHH
T ss_conf 77888676848879999999708999999999999999987-----499814754247887679-996899999999999
Q ss_pred HHCCCCEEEECCCCCHHHHHH-HCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCC
Q ss_conf 828995797414543588986-0598999900478736878404799999999999999998724
Q gi|254780782|r 322 TTGNIPLLSTSGGTSDARFIK-DYCPVIEFGLVGRTMHALNENASLQDLEDLTCIYENFLQNWFI 385 (389)
Q Consensus 322 ~~g~~~~~~~~gg~~d~~~~~-~~iP~v~fGp~~~~~H~pdE~i~i~~l~~~~~~~~~~i~~~~~ 385 (389)
T Consensus 311 ~~g~~p~~~~~gGtsDa~~~~~~gip~v~~Gp~~~~aH~~dE~v~i~~l~~~~~iy~~~i~rlla 375 (375)
T PRK13009 311 VTGITPELSTSGGTSDARFIADYGCQVVEFGPVNATIHKVNERVSVADLEKLTDIYERILERLLA 375 (375)
T ss_pred HHCCCCEEECCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHC
T ss_conf 87899778636551599999870999999777999877787409999999999999999999719