HHsearch alignment for GI: 254780782 and conserved domain: PRK13013
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed.
Probab=100.00 E-value=0 Score=516.32 Aligned_cols=380 Identities=24% Similarity=0.320 Sum_probs=320.9
Q ss_pred CHHHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHHHCCCEEEEEEECCC----CCCEEEEEEEEEC--CCCCEEEEECC
Q ss_conf 8789999999964999789---9689999999999977984899970588----8762489999987--99988999733
Q gi|254780782|r 2 TPDCLEHLIQLIKCPSVTP---QDGGAFFILVNTLKLLGFSIEEKDFQTK----NTSIVKNLYARFG--TEAPHLMFAGH 72 (389)
Q Consensus 2 ~~e~v~~l~~lv~ips~s~---~e~~~~~~l~~~l~~~G~~~~~~~~~~~----~~~~~~~~~~~~g--~~~~~ill~~H 72 (389)
T Consensus 13 ~de~v~ll~~LV~ipSv~p~g~~~~~~a~~l~~~l~~~G~~~~~~~~~g~~g~~~~~~r~Nlva~~~g~~~~~~l~l~gH 92 (427)
T PRK13013 13 RDDLVALTQDLIRIPTLNPPGRNYREICEMLAARLAPRGFEVELIRAHGAPGDSETYPRWNLVARRQGARPGDCVHFNSH 92 (427)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECC
T ss_conf 18799999999589998989959899999999999977994899965788775455652379999679999877999688
Q ss_pred CCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC-CCCCEEEEEEEECCCEECCCCCCCCC
Q ss_conf 68157888777256664224521332365443332012454410000000113-57834999752022011044211111
Q gi|254780782|r 73 IDVVPPGDFNHWTYPPFSATIAEGKIYGRGIVDMKGSIACFIAAVARFIPKYK-NFGSISLLITGDEEGPAINGTKKMLS 151 (389)
Q Consensus 73 ~Dtvp~~~~~~W~~~Pf~~~~~~g~l~GrG~~D~Kg~ia~~l~a~~~l~~~~~-~~~~i~~~~~~dEE~~~~~G~~~l~~ 151 (389)
T Consensus 93 ~DvVp~gd--~W~~dPf~~~i~dg~lYGRGa~DmKgg~aa~l~A~~~l~~~~~~~~g~v~~~~~~dEE~g~~~g~~~l~~ 170 (427)
T PRK13013 93 HDVVEVGH--GWTRDPFGGEVEDGRIYGRGACDMKGGLAASIIAAEAFIAVYPDFAGAIEISATADEESGGFGGVAYLAE 170 (427)
T ss_pred CCCCCCCC--CCCCCCCCCEEECCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHH
T ss_conf 58638999--8877999767889999876620036867999999999997465668618999996333477674899985
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCC---
Q ss_conf 00013321203541456654343100123222357999999641231000000120134554432011223344566---
Q gi|254780782|r 152 WIEKKGEKWDACIVGEPTCNHIIGDTIKIGRRGSLSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIGFDTGN--- 228 (389)
Q Consensus 152 ~~~~~~~~~d~~i~~ep~~~~~~~~~i~~g~rG~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~--- 228 (389)
T Consensus 171 ~~~~~~~~~d~~iv~EPt~~~----~i~~g~kG~~~~~v~v~G~~aH~s~P~~G~NAi~~~~~~l~~l~~~~~~~~~~~~ 246 (427)
T PRK13013 171 QGYFAPPRVQHVIIPEPLNKD----RICLGHRGVWWAEIETHGRIAHGSMPFLGDSAIRHMGAVLEEIEERLFPLLATKR 246 (427)
T ss_pred HCCCCCCCCCEEEECCCCCCC----CEEEECCCEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 175466667768845889877----1577304379999999716715468644659999999999999997667764024
Q ss_pred ---CC----CCCEEEEEEEEEECCC---------CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf ---44----2101466765542046---------6655432116651343420677999999999987653242034311
Q gi|254780782|r 229 ---TT----FSPTNMEITTIDVGNP---------SKNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSH 292 (389)
Q Consensus 229 ---~~----~~~~~~~i~~i~~g~~---------~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~ 292 (389)
T Consensus 247 ~~~p~~~~~~~~~t~ni~~i~gG~~~~~~~~~g~~~~~vp~~~~~~~d~R~~p~~~~~~v~~~i~~~~~~~~~~~~~~~~ 326 (427)
T PRK13013 247 TAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEVTALLERLKATRPGFAY 326 (427)
T ss_pred CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 45877877666653788667658644566656752343266069999715788889999999999999999843788369
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH-C--CCEEEEEECC-CCCCCCCCEEEHHH
Q ss_conf 232226631125786789999999999998289957974145435889860-5--9899990047-87368784047999
Q gi|254780782|r 293 TVHFSSPVSPVFLTHDRKLTSLLSKSIYNTTGNIPLLSTSGGTSDARFIKD-Y--CPVIEFGLVG-RTMHALNENASLQD 368 (389)
Q Consensus 293 ~i~~~~~~~p~~~~~~~~l~~~l~~a~~~~~g~~~~~~~~gg~~d~~~~~~-~--iP~v~fGp~~-~~~H~pdE~i~i~~ 368 (389)
T Consensus 327 ~~~~~~~~~P~~~~~d~p~v~~l~~a~~~~~g~~~~~~~~~g~~d~~~~~~~g~~~~~v~fGPG~~~~aH~~dE~v~id~ 406 (427)
T PRK13013 327 EIRDLFEVLPTMTDRDAPVVRSVAAAIERVLARQADYVVSPGTYDQKHIDRIGKLKNCIAYGPGILDLAHQPDEWVGIQD 406 (427)
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEHHH
T ss_conf 99983134766789888999999999999878998769724511067899737888889989997667878881188999
Q ss_pred HHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999999872477
Q gi|254780782|r 369 LEDLTCIYENFLQNWFITP 387 (389)
Q Consensus 369 l~~~~~~~~~~i~~~~~~~ 387 (389)
T Consensus 407 l~~~~ki~a~~l~~ll~~~ 425 (427)
T PRK13013 407 MVDSAKVMALVLADLLAGK 425 (427)
T ss_pred HHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999999985679