HHsearch alignment for GI: 254780782 and conserved domain: pfam05343
>pfam05343 Peptidase_M42 M42 glutamyl aminopeptidase. These peptidases are found in Archaea and Bacteria. The example in Lactococcus lactis, PepA, aids growth on milk. Pyrococcus horikoshii contain a thermostable de-blocking aminopeptidase member of this family used commercially for N-terminal protein sequencing.
Probab=99.06 E-value=4.6e-09 Score=74.65 Aligned_cols=67 Identities=25% Similarity=0.243 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEE-ECCCCCHHHHH---HHCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHH
Q ss_conf 78999999999999828995797-41454358898---6059899990047873687840479999999999
Q gi|254780782|r 308 DRKLTSLLSKSIYNTTGNIPLLS-TSGGTSDARFI---KDYCPVIEFGLVGRTMHALNENASLQDLEDLTCI 375 (389)
Q Consensus 308 ~~~l~~~l~~a~~~~~g~~~~~~-~~gg~~d~~~~---~~~iP~v~fGp~~~~~H~pdE~i~i~~l~~~~~~ 375 (389)
T Consensus 222 ~~~l~~~l~~~A~~-~~Ip~Q~~~~~~~gTDa~~~~~~~~Gi~~~~i~iP~ry~Hs~~E~~~~~D~~~~i~L 292 (292)
T pfam05343 222 HPKLRKFLLELAKK-NNIPYQVEVYPGGGTDAGAAHLTGGGVPTALIGIPTRYIHSPVEVAHLDDLEATIKL 292 (292)
T ss_pred CHHHHHHHHHHHHH-CCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHC
T ss_conf 98999999999987-699728985688776699999838998789981050556773347679999998519