PSIBLAST alignment of GI: 254780782 and protein with PDB id: 1vix

>gi|40890019|pdb|1VIX|A Chain A, Crystal Structure Of A Putative Peptidase T Length = 420
>gi|40890020|pdb|1VIX|B Chain B, Crystal Structure Of A Putative Peptidase T Length = 420
 Score = 91.9 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/421 (12%), Positives = 107/421 (25%), Gaps = 57/421 (13%)

Query: 1   MTPD-CLEHLIQLIKCPSVTPQDGG----------AFFILVNTLKLLGFSIEEKDFQTKN 49
           M+ D  LE  +  +   + +                  +L   L+ +G         ++ 
Sbjct: 1   MSLDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEMGL---INVTLSEK 57

Query: 50  TSIVKNLYARFGTEAPHLMFAGHIDVVPPGDFNHWTYPPFSATIAEGKIYGRG------- 102
            +++  L A    + P + F  H+D  P     +                G G       
Sbjct: 58  GTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGDIALGIGDEVLSPV 117

Query: 103 ----------------------IVDMKGSIACFIAAVARFIPKYKNFGSISLLITGDEEG 140
                                   D K  IA  + A+A    K    G I +  T DEE 
Sbjct: 118 MFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKKIPHGDIRVAFTPDEEV 177

Query: 141 PAINGTKKMLSWIEKKGEKWDACIVGEPTCNHIIGDTIKIGRRGSLSGEITIHGKQGHVA 200
                   + ++  +     D   VGE    +    ++ I           +        
Sbjct: 178 GKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIK---------IVGNNVHPGT 228

Query: 201 YPHLTENPIRGLIPLLHQLTNIGFDTGNTTFSPTNMEITTIDVGNPSKNVIPAQVKMSFN 260
              +  N +     +  ++           +                         +  +
Sbjct: 229 AKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYH-----LASMKGTVERADMHYIIRD 283

Query: 261 IRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSHTVHFSSPVSPVFLTHDRKLTSLLSKSIY 320
                    K    EI  ++ KG+     +   +  S       +     +  +  +++ 
Sbjct: 284 FDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMR 343

Query: 321 NTTGNIPLLSTSGGTSDARFIKDYCPVIEFGLVGRTMHALNENASLQDLEDLTCIYENFL 380
           +      L    GGT  A+      P       G   H  +E  +L+ +E    +     
Sbjct: 344 DCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIA 403

Query: 381 Q 381
           +
Sbjct: 404 E 404