PSIBLAST alignment of GI: 254780782 and protein with PDB id: 1vix
>gi|40890019|pdb|1VIX|A Chain A, Crystal Structure Of A Putative Peptidase T Length = 420
>gi|40890020|pdb|1VIX|B Chain B, Crystal Structure Of A Putative Peptidase T Length = 420
Score = 91.9 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/421 (12%), Positives = 107/421 (25%), Gaps = 57/421 (13%)
Query: 1 MTPD-CLEHLIQLIKCPSVTPQDGG----------AFFILVNTLKLLGFSIEEKDFQTKN 49
M+ D LE + + + + +L L+ +G ++
Sbjct: 1 MSLDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEMGL---INVTLSEK 57
Query: 50 TSIVKNLYARFGTEAPHLMFAGHIDVVPPGDFNHWTYPPFSATIAEGKIYGRG------- 102
+++ L A + P + F H+D P + G G
Sbjct: 58 GTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGDIALGIGDEVLSPV 117
Query: 103 ----------------------IVDMKGSIACFIAAVARFIPKYKNFGSISLLITGDEEG 140
D K IA + A+A K G I + T DEE
Sbjct: 118 MFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKKIPHGDIRVAFTPDEEV 177
Query: 141 PAINGTKKMLSWIEKKGEKWDACIVGEPTCNHIIGDTIKIGRRGSLSGEITIHGKQGHVA 200
+ ++ + D VGE + ++ I +
Sbjct: 178 GKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIK---------IVGNNVHPGT 228
Query: 201 YPHLTENPIRGLIPLLHQLTNIGFDTGNTTFSPTNMEITTIDVGNPSKNVIPAQVKMSFN 260
+ N + + ++ + + +
Sbjct: 229 AKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYH-----LASMKGTVERADMHYIIRD 283
Query: 261 IRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSHTVHFSSPVSPVFLTHDRKLTSLLSKSIY 320
K EI ++ KG+ + + S + + + +++
Sbjct: 284 FDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMR 343
Query: 321 NTTGNIPLLSTSGGTSDARFIKDYCPVIEFGLVGRTMHALNENASLQDLEDLTCIYENFL 380
+ L GGT A+ P G H +E +L+ +E +
Sbjct: 344 DCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVQVIVRIA 403
Query: 381 Q 381
+
Sbjct: 404 E 404