RPSBLAST alignment for GI: 254780782 and conserved domain: PRK13013
>gnl|CDD|183841 PRK13013, PRK13013, succinyl-diaminopimelate desuccinylase; Reviewed. Length = 427
Score = 109 bits (274), Expect = 1e-24
Identities = 79/313 (25%), Positives = 131/313 (41%), Gaps = 36/313 (11%)
Query: 55 NLYARF--GTEAPHLMFAGHIDVVPPGDFNHWTYPPFSATIAEGKIYGRGIVDMKGSIAC 112
NL AR + + F H DVV G + WT PF + +G+IYGRG DMKG +A
Sbjct: 73 NLVARRQGARDGDCVHFNSHHDVVEVG--HGWTRDPFGGEVKDGRIYGRGACDMKGGLAA 130
Query: 113 FIAAVARFIPKYKNF-GSISLLITGDEEGPAINGTKKMLSWIEKKG----EKWDACIVGE 167
I A F+ Y +F GSI + T DEE G ++++ ++G ++ I+ E
Sbjct: 131 SIIAAEAFLAVYPDFAGSIEISGTADEESGGFGG----VAYLAEQGRFSPDRVQHVIIPE 186
Query: 168 PTCNHIIGDTIKIGRRGSLSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIGFD-- 225
P D I +G RG E+ G+ H + P L ++ IR + +L ++ F
Sbjct: 187 PLNK----DRICLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLAEIEERLFPLL 242
Query: 226 TGNTTFSP--------TNMEITTIDVGNPSKNV---------IPAQVKMSFNIRFNDLWN 268
T P + + I +I G P ++ + + ++ + RF +
Sbjct: 243 ATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEED 302
Query: 269 EKTLKEEIRSRLIKGIQNVPKLSHTVHFSSPVSPVFLTHDRKLTSLLSKSIYNTTGNIPL 328
+K EI + L + + P ++ + V P D + ++ +I G
Sbjct: 303 LDEVKAEITALLERLKRARPGFAYEIRDLFEVLPTMTDRDAPVVRSVAAAIERVLGRQAD 362
Query: 329 LSTSGGTSDARFI 341
S GT D + I
Sbjct: 363 YVVSPGTYDQKHI 375