RPSBLAST alignment of GI: 254780782 and protein with PDBid: 1y0y
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Length = 353
Score = 109 bits (272), Expect = 1e-24
Identities = 52/381 (13%), Positives = 104/381 (27%), Gaps = 46/381 (12%)
Query: 6 LEHLIQLIKCPSVTPQ-DGGAFFILVNTLKLLGFSIEEKDFQTKNTSIVKNLYARFGTEA 64
E L ++++ P V+ G +++ +K ++ N+ A E
Sbjct: 9 YELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVDKL--------GNVIAHKKGEG 60
Query: 65 PHLMFAGHIDVVPPGDFNHWTYPPFSATIAEGKIYGRGIVDMKGSIACFIAAVARFIPKY 124
P +M A H+D + ++ G VD K IA
Sbjct: 61 PKVMIAAHMDQIGLMV-------THIEKNGFLRVAPIGGVDPKTLIAQRFKVWIDKGKFI 113
Query: 125 KNFGSISLLITGDEEGPAINGTKKMLSWIEKKGEKWDACIVGEPTCNHIIGDTIKIGRRG 184
+G + + ++ +G + +KIG
Sbjct: 114 --YGVGASVPPHIQKPEDRKKAPDWDQIF---------IDIGAESKEEAEDMGVKIGTVI 162
Query: 185 SLSGEITIHGKQGHVAYPHLTENPIRGLIPLLHQLTNIGFDTGNTTFSPTNMEITTIDVG 244
+ G + GK V+ + +L + + F T E +
Sbjct: 163 TWDGRLERLGKHRFVSIAFDDRIAV---YTILEVAKQLKDAKADVYFVATVQEEVGLRGA 219
Query: 245 NPSKNVIPAQVKMSFNIRFNDLWNEKTLKEEIRSRLIKGIQNVPKLSHTVHFSSPVSPVF 304
S I + ++ +++ + S H +
Sbjct: 220 RTSAFGIEPDYGFAIDVTIAADIPGTPEHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEE 279
Query: 305 LTHDRKLTSLLSKSIYNTTGNIPLLSTSGGTSDARFI---KDYCPVIEFGLVGRTMHALN 361
L ++ L GG +DA I K P + R +H+
Sbjct: 280 LAKKHEI-------------PYQLEILLGGGTDAGAIHLTKAGVPTGALSVPARYIHSNT 326
Query: 362 ENASLQDLEDLTCIYENFLQN 382
E +D++ + L+N
Sbjct: 327 EVVDERDVDATVELMTKALEN 347