HHsearch alignment for GI: 254780783 and conserved domain: COG4957
>COG4957 Predicted transcriptional regulator [Transcription].
Probab=100.00 E-value=0 Score=382.45 Aligned_cols=144 Identities=52% Similarity=0.819 Sum_probs=130.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEE
Q ss_conf 98655677867899999999999973688888999999999999999502666665557854589985736513888459
Q gi|254780783|r 1 MDDDASFDSSERFLEMTVDIVAAYVSNHVVPMADIGSLITDVHSALQRVVSRAPCQDNVQPERLKPAVPIRKSIENGCLY 80 (149)
Q Consensus 1 m~~~~~~~~~~~l~~lta~IV~A~vs~n~v~~~el~~lI~~v~~aL~~l~~~~~~~~~~~~~~~~PAv~i~kSi~~d~ii 80 (149)
T Consensus 1 ~~~~~~~~~~~~liELTA~IVsAYVsnN~vp~~eLP~LI~~vh~aL~~~~~p~~~~--~~~~~~~PAV~~kKSVtpD~Ii 78 (148)
T COG4957 1 MMTETSDESNDLLIELTADIVSAYVSNNPVPVSELPDLIAQVHAALAGTGGPAEPP--VPVEKQKPAVPIKKSVTPDYII 78 (148)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCCCCCCCCCEEE
T ss_conf 97433453158999999999999970798781045899999999986038988888--8766668998965465888687
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 743610002589998674399989999972737988322999999999999981998101005666
Q gi|254780783|r 81 CLEDGMQFKSLKRHLKTHHNMTPDEYRIKWNLASDYPMVSREYATTRSKLAKNMGLGRGRKKRVLT 146 (149)
Q Consensus 81 ClecGk~~K~LkRHL~t~hgLtp~eYR~kwGLp~dyPlvAp~Ys~~Rs~~Ak~~GLg~~~rk~~~~ 146 (149)
T Consensus 79 cLEDGkkfKSLKRHL~t~~gmTPd~YR~KW~LP~dYPMvAPnYAa~RS~LAK~mGLGrk~~~~~~~ 144 (148)
T COG4957 79 CLEDGKKFKSLKRHLTTHYGLTPDEYRAKWGLPPDYPMVAPNYAAARSQLAKAMGLGRKRKAGAPA 144 (148)
T ss_pred EECCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 702685227899987322599979999843999888764647899999999984768787777775