HHsearch alignment for GI: 254780784 and conserved domain: COG1107

>COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [DNA replication, recombination, and repair].
Probab=97.54  E-value=6.7e-05  Score=58.54  Aligned_cols=50  Identities=6%  Similarity=0.025  Sum_probs=30.7

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHH
Q ss_conf             99999999999843566743322448757999977115000037860779
Q gi|254780784|r  525 KRGRLHILNEMSKVLSESRLQLGEFTPRVEIMAIPPDQIRNVIGMGGKVI  574 (699)
Q Consensus       525 ~~gr~~il~~m~~~~~~~~~~~~~~ap~~~~~~i~~~ki~~~iG~gG~~i  574 (699)
T Consensus       579 ~q~~~~ve~qL~aa~~~vk~~~l~nGi~~~tlDVE~yahkFtfP~pGk~~  628 (715)
T COG1107         579 EQAKEAVEEQLRAALPHVKSERLPNGIAFNTLDVENYAHKFTFPPPGKLS  628 (715)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEEHHHCCCCCCCCCCCCCC
T ss_conf             99999999999976413432662586378986253413456579986442