HHsearch alignment for GI: 254780784 and conserved domain: COG2183
>COG2183 Tex Transcriptional accessory protein [Transcription].
Probab=99.21 E-value=6.8e-11 Score=107.30 Aligned_cols=79 Identities=44% Similarity=0.628 Sum_probs=73.2
Q ss_pred CCCCCCEEEEEEEEEEECCEEEECCCCCCEEEEEEECCCCCCCCHHHHCCCCCEEEEEEEEECC-CCCEEEEEEECCCCC
Q ss_conf 7546867899999994153699828797104886631444547855603259889999997868-998666873047787
Q gi|254780784|r 616 VPEVNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLSTERVAKTSDVVKEGDTVWVKLLDFDD-RGKIKLSMKVVDQNT 694 (699)
Q Consensus 616 ~~e~g~~y~~~v~~i~~fGafve~~~g~~gl~HiS~l~~~~v~~~~d~~~~Gd~i~vk~~~~d~-~g~i~lSrk~~~~~~ 694 (699)
T Consensus 655 dLk~Gm~leg~Vrnv~~fgafVdIgv~qDglvHis~ls~~fv~~P~~vv~vGdiV~v~V~~vD~~r~rI~Lsmr~~~~~~ 734 (780)
T COG2183 655 DLKPGMILEGTVRNVVDFGAFVDIGVHQDGLVHISQLSDKFVKDPNEVVKVGDIVKVKVIEVDTARKRIALSMRLDEEEG 734 (780)
T ss_pred HCCCCCEEEEEEEEEEECCCEEEECCCCCEEEEHHHHHHHHCCCHHHHCCCCCEEEEEEEEEECCCCEEEEEEECCCCCC
T ss_conf 50678888899887543164689456666066689854333079588401587799999998514572324763467766