HHsearch alignment for GI: 254780784 and conserved domain: COG2996

>COG2996 Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only].

Probab=95.89  E-value=0.038  Score=36.19  Aligned_cols=65  Identities=20%  Similarity=0.330  Sum_probs=57.0

Q ss_pred             CCCEEEEEEEEEEECCEEEECCCCCCEEEEEEECCCCCCCCHHHHCCCCCEEEEEEEEECCCCCEEEEEEECC
Q ss_conf             6867899999994153699828797104886631444547855603259889999997868998666873047
Q gi|254780784|r  619 VNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLSTERVAKTSDVVKEGDTVWVKLLDFDDRGKIKLSMKVVD  691 (699)
Q Consensus       619 ~g~~y~~~v~~i~~fGafve~~~g~~gl~HiS~l~~~~v~~~~d~~~~Gd~i~vk~~~~d~~g~i~lSrk~~~  691 (699)
T Consensus       155 ~nq~v~~tVYr~~~~G~fv~~e~~~~GfIh~sEr~--------~~prlG~~l~~rVi~~reDg~lnLSl~p~~  219 (287)
T COG2996         155 KNQEVDATVYRLLESGTFVITENGYLGFIHKSERF--------AEPRLGERLTARVIGVREDGKLNLSLRPRA  219 (287)
T ss_pred             HCCEEEEEEEEEECCCEEEEECCCEEEEECCHHHC--------CCCCCCCEEEEEEEEECCCCEEECCCCCCC
T ss_conf             43761059999821423999718768998606600--------666677557889999824874502215631