HHsearch alignment for GI: 254780784 and conserved domain: PRK06299
>PRK06299 rpsA 30S ribosomal protein S1; Reviewed.
Probab=99.66 E-value=1.9e-15 Score=144.32 Aligned_cols=79 Identities=34% Similarity=0.545 Sum_probs=51.6
Q ss_pred CCCCCCEEEEEEEEEEECCEEEECCCCCCEEEEEEECCC-CCCCCHHHHCCCCCEEEEEEEEECC-CCCEEEEEEECCCC
Q ss_conf 754686789999999415369982879710488663144-4547855603259889999997868-99866687304778
Q gi|254780784|r 616 VPEVNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLST-ERVAKTSDVVKEGDTVWVKLLDFDD-RGKIKLSMKVVDQN 693 (699)
Q Consensus 616 ~~e~g~~y~~~v~~i~~fGafve~~~g~~gl~HiS~l~~-~~v~~~~d~~~~Gd~i~vk~~~~d~-~g~i~lSrk~~~~~ 693 (699)
T Consensus 273 ~~~~G~~v~g~V~~i~~fGafVel~~gveGlvhiSelsw~~~~~~p~~~~~~G~~V~~kIl~id~~~~risLS~K~~~~n 352 (556)
T PRK06299 273 KYPVGSKVKGKVTNITDYGAFVELEEGIEGLVHVSEMSWTKKNKHPSKVVSVGQEVEVMVLEIDEEKRRISLGLKQCKEN 352 (556)
T ss_pred HCCCCCEEEEEEEEECCCEEEEEECCCCEEEEEHHHCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCC
T ss_conf 47899989999999827607999549958998878716754447978954479779999999724436888863236679
Q ss_pred C
Q ss_conf 7
Q gi|254780784|r 694 T 694 (699)
Q Consensus 694 ~ 694 (699)
T Consensus 353 P 353 (556)
T PRK06299 353 P 353 (556)
T ss_pred H
T ss_conf 7